TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419390.2.1
(1603 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_120884.1| Arabidopsis thaliana DNA binding / nucleic... 462 e-150
gb|BT003950.1| Arabidopsis thaliana clone RAFL15-25-L07 (R2... 453 e-147
ref|NM_125493.2| Arabidopsis thaliana DNA binding / nucleic... 453 e-147
emb|BX829495.1|CNS0A17Y Arabidopsis thaliana Full-length cD... 437 e-142
emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome... 138 e-130
emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome ... 138 e-128
dbj|AB008269.1| Arabidopsis thaliana genomic DNA, chromosom... 139 e-118
dbj|AK220794.1| Arabidopsis thaliana mRNA for RNA helicase,... 315 e-105
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 143 1e-089
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 142 1e-089
gb|B61339.1|B61339 T22D6TF TAMU Arabidopsis thaliana genomi... 138 1e-053
emb|AL094383.1|CNS00X3L Arabidopsis thaliana genome survey ... 84 1e-043
gb|BT005946.1| Arabidopsis thaliana At2g06510 gene, complet... 73 2e-040
emb|BX821009.1|CNS0AA0D Arabidopsis thaliana Full-length cD... 73 2e-040
dbj|AK118699.1| Arabidopsis thaliana At2g06510 mRNA for put... 73 2e-040
ref|NM_201704.1| Arabidopsis thaliana DNA binding / nucleic... 73 5e-040
ref|NM_126648.2| Arabidopsis thaliana DNA binding / nucleic... 73 6e-040
gb|AU227819.1|AU227819 AU227819 RAFL15 Arabidopsis thaliana... 91 6e-037
gb|BX834955.1|BX834955 BX834955 Arabidopsis thaliana Hormon... 73 8e-037
gb|AF439837.1|AF439837 Arabidopsis thaliana AT4g19130/T18B1... 67 4e-036
ref|NM_118032.1| Arabidopsis thaliana DNA binding / nucleic... 67 4e-036
gb|AA067503.1|AA067503 26348 Lambda-PRL2 Arabidopsis thalia... 149 2e-034
gb|AC006420.4| Arabidopsis thaliana chromosome 2 clone T12H... 73 5e-034
gb|BX834777.1|BX834777 BX834777 Arabidopsis thaliana Hormon... 72 8e-033
gb|BP839839.1|BP839839 BP839839 RAFL19 Arabidopsis thaliana... 95 3e-032
gb|CW798485.1|CW798485 WiscDsLox412D12 Arabidopsis thaliana... 91 4e-032
gb|BP588128.1|BP588128 BP588128 RAFL15 Arabidopsis thaliana... 87 7e-032
gb|BH854836.1|BH854836 SALK_088429.44.85.x Arabidopsis thal... 138 3e-031
emb|AL021687.1|ATT18B16 Arabidopsis thaliana DNA chromosome... 67 2e-030
emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosom... 67 3e-029
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 67 6e-027
ref|NM_123908.1| Arabidopsis thaliana DNA binding / nucleic... 68 2e-025
dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosom... 68 2e-022
>ref|NM_120884.1| Arabidopsis thaliana DNA binding / nucleic acid binding AT5G08020
mRNA, complete cds
Length = 1815
Score = 462 bits (1002), Expect(3) = e-150
Identities = 183/282 (64%), Positives = 226/282 (80%)
Frame = -1 / +1
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + E F P ++N V ID+LG YV ++L+D++GVVQSVSPT+S+RRK DNE IPK
Sbjct: 778 VEEASNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPK 957
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDI +AD++ KTV +SLWNDLAT GQELLDM D+ PV+AIKSLKV FQGVSLSTI RS
Sbjct: 958 RDITLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRS 1137
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPA 953
+ INP+ PEA LKSWYD+EGK+TS++ I + + ++ G +SMYSDRVFLSHITS+P+
Sbjct: 1138 NVVINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPS 1317
Query: 952 MGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+G+EKPVFFS A IS IKPDQ MWYRAC TCNKKVTEA SGYWCE CQK D ECSLRY
Sbjct: 1318 LGEEKPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRY 1497
Query: 772 IMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD 647
IM +K+SD TGE W+S FN+ AEKIIGC+AD+L+ ++ EEG+
Sbjct: 1498 IMAVKVSDSTGETWLSAFNDEAEKIIGCTADDLNDLKSEEGE 1623
Score = 176 bits (379), Expect(2) = 4e-045
Identities = 99/258 (38%), Positives = 145/258 (56%)
Frame = +2 / -1
Query: 671 IKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHL 850
I+++ AA++LL ++E PS TS +G+ H + A V+ L P++R FS+
Sbjct: 1599 IEIISCAADNLLCFIIECR*PSFTS*VGDFHRHYIP*TAFLVLFLTTFTPITRVHCFSNF 1420
Query: 851 LVTGRASTVPHILIRLDVAYDGIQTEENRLFLAHSRITGDVRQKNSIRIHGLETTSACGT 1030
LVTG ASTVPH L+ LD AY EE RL LA I DVR+KNS+RIHG + T
Sbjct: 1419 LVTGLASTVPHCLVWLDEAYVSSSAEEYRLLLA*RGIACDVRKKNSVRIHGS*SVVGRRT 1240
Query: 1031 HFCTDWCQ*SIFAFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRYF*ALYRNNRRT 1210
H T+ +F F +IP ++ S ++R+ SA+S + + L+ F R+NR
Sbjct: 1239 HPRTNSRHRCLFPFSIIPRFQLCSFWRIRVYHHIASADSRQ*NTLKSSNFKRFNRDNRVI 1060
Query: 1211 VNHVQKLLASRSSKIIPERNSNSFARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNI 1390
++HVQ+ LA+ S IIP+ + NSF +I + ++L L+V L N R LN+T+NI
Sbjct: 1059 ISHVQQFLANASC*IIPKGHHNSFLCLISQSYISLWDHLIVVLPSNAHGRRNTLNNTDNI 880
Query: 1391 YKLPATDVWS*LINLDKV 1444
K+ V + LIN KV
Sbjct: 879 NKVFLIHVCTQLINGYKV 826
Score = 149 bits (319), Expect(4) = 2e-087
Identities = 72/108 (66%), Positives = 79/108 (73%)
Frame = +3 / -2
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQ 869
QP+IFSA SLN D Q SPV SE+ ++YL HS SFF SHQ P+ ASVTFLLQV+Q
Sbjct: 1580 QPIIFSASSLNADNQVSPVESETFTAIIYLKLHSWSFF*QLSHQ*PESIASVTFLLQVLQ 1401
Query: 870 ARYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
ARYHI SGLM LM A LK TGFS P G LVM*+RKTLSEYMDL P
Sbjct: 1400 ARYHIVWSGLMKLM*ALVLKNTGFSSPKEGLLVM*ERKTLSEYMDLDP 1257
Score = 128 bits (275), Expect(4) = 2e-087
Identities = 60/103 (58%), Positives = 73/103 (70%)
Frame = +3 / -2
Query: 1056 EVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKSSW 1235
+VS PS SYQD F+ASG+ G I+ +LL IV+ +TP K+ T R IA TG LS MS SSW
Sbjct: 1214 DVSFPSASYQDFNFVASGELGFITTLLLLIVDNETP*KAPTLRDLIAITG*LSAMSSSSW 1035
Query: 1236 PVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
P+ VARSFQR+ TV SSA +S FGI+SLS FLL L VG+
Sbjct: 1034 PMPVARSFQRDTTTVFFVSSAKVISLFGIISLSFFLLMLMVGE 906
Score = 92.3 bits (195), Expect(3) = e-150
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = -1 / +1
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
+ + KLKEATW HLFR+SV+Q EY +EKRQRITVRG +P+DFAAE++ LL++I+K
Sbjct: 1627 NEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISK 1797
Score = 76.7 bits (161), Expect(4) = 1e-030
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = -2 / +2
Query: 1002 PCILIEFFCLTSPVILLWARKSLFSSVCMPS*ATSSLIRICGTVLARPVTRR*LKLLGLD 823
PCIL EFF LTS I L AR+SL+SS +*A+SS + CGTVLARPVTR+ LK L
Sbjct: 1268 PCILTEFFFLTSQAIPL*ARRSLYSSALELT*ASSSQTKQCGTVLARPVTRKLLKQWTLV 1447
Query: 822 TGARGAKRMTLSA 784
G + ++ T +A
Sbjct: 1448 IGVKVVRKRTKNA 1486
Score = 68.4 bits (143), Expect(4) = 1e-030
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1 / +1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPP 1454
G+ +S+GSL++ANKQFKTV+NDYE++LNEN+ VEEA E P
Sbjct: 676 GKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTP 813
Score = 62.5 bits (130), Expect(4) = 2e-087
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = +3 / -2
Query: 459 F*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+* + +S S L SAAKS G +PLTVILCLFS +YSC TL R R* QVA
Sbjct: 1814 Y*DVLFLEMSWSNNLVSAAKSIGETPLTVILCLFSLLYSC*ETLIRKR*DDQVA 1653
Score = 44.1 bits (90), Expect(4) = 2e-087
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +3 / -2
Query: 1479 ASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
ASST FSF S*SF TVLNCLLA L DP +
Sbjct: 788 ASSTSEFSFRVIS*SF*TVLNCLLASLSDPLD 693
Score = 33.6 bits (67), Expect(4) = 1e-030
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3 / +3
Query: 1283 QNCYYFSLE*SCYYDWPRAFGHG*QFSCCCD 1191
+NC LE*S + WPR GHG* C D
Sbjct: 987 ENCCGVPLE*SSNWHWPRTAGHG**SPCYRD 1079
Score = 29.0 bits (57), Expect(2) = 4e-045
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / -1
Query: 1481 FFNNSILV**QLIVIFDCLELLVGNSK 1561
FFN IL+* LI++ + LELL+ K
Sbjct: 786 FFNLRILI*GHLIIVLNRLELLISKLK 706
Score = 24.4 bits (47), Expect(4) = 1e-030
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -3 / +3
Query: 779 EIHHGDQALRSHW*GLGVRVQRACGEDHWL 690
++++G ++LR +W* L + +Q ED+ L
Sbjct: 1491 KVYNGGESLRLNW*NLVICIQ**SREDYRL 1580
Score = 22.6 bits (43), Expect(3) = e-150
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / +2
Query: 1566 DLLELPTSSSRQSKMTMSCH*TRMLLLKK 1480
D L L SSSR+ + M * R+L LKK
Sbjct: 701 DHLSLLISSSRRFRTIMR*P*MRILRLKK 787
>gb|BT003950.1| Arabidopsis thaliana clone RAFL15-25-L07 (R20760) putative RNA
helicase (At5g61000) mRNA, complete cds
Length = 2094
Score = 453 bits (984), Expect(2) = e-147
Identities = 178/282 (63%), Positives = 226/282 (80%)
Frame = -1 / +3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + E F+P ++N V I++LG YV +EL+D++GVVQSVSPT+S+RR+ DNE IPK
Sbjct: 930 VEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPK 1109
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDI +AD+S KTV +SLWNDLAT GQELLDM D SPV+AIKSLKV DFQGVSLSTI RS
Sbjct: 1110 RDITLADESRKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRS 1289
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPA 953
+ INP+ PEAK LKSW+DSEGK+ S++ I + + + G +S+Y+DRV LSHITS+P+
Sbjct: 1290 NVVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPS 1469
Query: 952 MGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+ +EKPVFFS A IS IKPDQ MWY+AC TCNKKVTEA SGYWCEGCQ+ ECSLRY
Sbjct: 1470 LFEEKPVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRY 1649
Query: 772 IMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD 647
IM +K++D +GE W+S FN+ AEKI+GCSADEL++++ EEG+
Sbjct: 1650 IMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSEEGE 1775
Score = 128 bits (275), Expect(4) = 5e-079
Identities = 63/107 (58%), Positives = 69/107 (64%)
Frame = +3 / -3
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQA 872
P IFSA SLN + Q SP S + +MYL HS F WHPSHQ P+ ASVTFLLQV+QA
Sbjct: 1729 PRIFSASSLNDEIQVSPDESVTFTAIMYLKLHSSYFLWHPSHQ*PESSASVTFLLQVLQA 1550
Query: 873 RYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
YHI SGLM LM A LK TGFS G LVM*+R T S Y D P
Sbjct: 1549 WYHIVWSGLMKLM*ALVLKNTGFSSNKDGLLVM*ERSTRSVYKDRDP 1409
Score = 123 bits (264), Expect(4) = 5e-079
Identities = 59/103 (57%), Positives = 73/103 (70%)
Frame = +3 / -3
Query: 1056 EVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKSSW 1235
++SLPSES QD FLASG SGLI+ +LL +V+ +TP KS T R IA TG+ S MS SS
Sbjct: 1366 DISLPSESNQDFNFLASGDSGLITTLLLLMVDNETP*KSPTLRDLIAITGD*SAMSSSS* 1187
Query: 1236 PVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
P+ VARSF R+ TV +SSA +S GI+SLS+ LL L VGD
Sbjct: 1186 PMPVARSFHRDTTTVFLDSSAKVISLLGIISLSVLLLILMVGD 1058
Score = 91.3 bits (193), Expect(2) = e-147
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = -1 / +3
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+ Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++ LL++I+
Sbjct: 1779 NEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 1946
Score = 81.7 bits (172), Expect(3) = 7e-033
Identities = 41/109 (37%), Positives = 59/109 (54%)
Frame = +2 / -2
Query: 671 IKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHL 850
++L+ + +LL +VE +PS + +G+ H V A ++ LA PV+R K F H
Sbjct: 1751 VELIS*TSKNLLCFIVE*RNPSFSR*VGDFHRHYVP*AAFFILSLASFTPVTRVKCFCHF 1572
Query: 851 LVTGRASTVPHILIRLDVAYDGIQTEENRLFLAHSRITGDVRQKNSIRI 997
LVT S VPH L+ D AY E+ RLF I DVR+K+S+ I
Sbjct: 1571 LVTSLTSLVPHCLVWFDEAYVSPSAEKYRLFFE*RWIACDVREKHSVSI 1425
Score = 76.7 bits (161), Expect(3) = 7e-033
Identities = 43/122 (35%), Positives = 67/122 (54%)
Frame = +2 / -2
Query: 1067 AFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRYF*ALYRNNRRTVNHVQKLLASRS 1246
AFR+ P ++ S R+N SA+ +R+ L++ F L N+R ++HV LL S
Sbjct: 1355 AFRIKPRFQLFSFW*FRVNNHIASADGRQRNTLKISNFERLDCNHR*LISHV**LLTYAS 1176
Query: 1247 SKIIPERNSNSFARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNIYKLPATDVWS*L 1426
KIIP+ + NSF +I + + LR L+V+ NT RY LN++N I K ++ + L
Sbjct: 1175 CKIIPQGHHNSFP*LISQSYIPLRNHLIVSSPSNTHGRRYTLNNSNKINKFLLINIQTQL 996
Query: 1427 IN 1432
N
Sbjct: 995 FN 990
Score = 72.1 bits (151), Expect(3) = 3e-026
Identities = 45/102 (44%), Positives = 59/102 (57%)
Frame = -2 / +1
Query: 999 CILIEFFCLTSPVILLWARKSLFSSVCMPS*ATSSLIRICGTVLARPVTRR*LKLLGLDT 820
CIL E F LTS I L+++KSL+ S +*A+S+ + CGT L R VTR+* K L L T
Sbjct: 1423 CILTECFSLTSQAIHLYSKKSLYFSALGLT*ASSNQTKQCGTKLVRLVTRK*QKHLTLVT 1602
Query: 819 GARGAKRMTLSAR*DTXXXXXSPIPLVRLGCPCSTSMRRRSL 694
G + A+ +A * T SP L +LG ST +RR L
Sbjct: 1603 GVKDARESMKNAA*GT*WR*KSPTHLEKLGFRHSTMKQRRFL 1728
Score = 67.5 bits (141), Expect(3) = 3e-026
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1 / +3
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPP 1454
G+ +S+GSL++ANKQFKTV+NDYE++LNEN+ VEEA E P
Sbjct: 828 GKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIP 965
Score = 58.8 bits (122), Expect(4) = 5e-079
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3 / -3
Query: 483 ISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+S S L SAAKS GA+P TV LCLFS +YS CVTLTR * VA
Sbjct: 1942 MS*SNNLVSAAKSRGATPFTVTLCLFSPLYSFCVTLTRKT*DDHVA 1805
Score = 44.6 bits (91), Expect(4) = 5e-079
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +3 / -3
Query: 1479 ASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
ASST FSFS S*SF TVLNCLLA DP +
Sbjct: 940 ASSTSEFSFSVIS*SF*TVLNCLLASFSDPLD 845
Score = 29.0 bits (57), Expect(3) = 3e-026
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3 / +2
Query: 1283 QNCYYFSLE*SCYYDWPRAFGHG*QFSCCCDKEPKS 1176
+NC +E*SC + A HG* +C C++ +S
Sbjct: 1139 ENCCGVPVE*SCNWHRSGATRHG*SVTCDCNQVSQS 1246
Score = 24.0 bits (46), Expect(3) = 7e-033
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2 / -2
Query: 1481 FFNNSILV**QLIVIFDCLELLV 1549
F N I + LI+I +C ELLV
Sbjct: 938 FLNL*IFIQCHLIIILNCFELLV 870
>ref|NM_125493.2| Arabidopsis thaliana DNA binding / nucleic acid binding AT5G61000
mRNA, complete cds
Length = 2074
Score = 453 bits (984), Expect(2) = e-147
Identities = 178/282 (63%), Positives = 226/282 (80%)
Frame = -1 / +3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + E F+P ++N V I++LG YV +EL+D++GVVQSVSPT+S+RR+ DNE IPK
Sbjct: 930 VEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPK 1109
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDI +AD+S KTV +SLWNDLAT GQELLDM D SPV+AIKSLKV DFQGVSLSTI RS
Sbjct: 1110 RDITLADESRKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRS 1289
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPA 953
+ INP+ PEAK LKSW+DSEGK+ S++ I + + + G +S+Y+DRV LSHITS+P+
Sbjct: 1290 NVVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPS 1469
Query: 952 MGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+ +EKPVFFS A IS IKPDQ MWY+AC TCNKKVTEA SGYWCEGCQ+ ECSLRY
Sbjct: 1470 LFEEKPVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRY 1649
Query: 772 IMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD 647
IM +K++D +GE W+S FN+ AEKI+GCSADEL++++ EEG+
Sbjct: 1650 IMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSEEGE 1775
Score = 128 bits (275), Expect(4) = 5e-079
Identities = 63/107 (58%), Positives = 69/107 (64%)
Frame = +3 / -1
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQA 872
P IFSA SLN + Q SP S + +MYL HS F WHPSHQ P+ ASVTFLLQV+QA
Sbjct: 1729 PRIFSASSLNDEIQVSPDESVTFTAIMYLKLHSSYFLWHPSHQ*PESSASVTFLLQVLQA 1550
Query: 873 RYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
YHI SGLM LM A LK TGFS G LVM*+R T S Y D P
Sbjct: 1549 WYHIVWSGLMKLM*ALVLKNTGFSSNKDGLLVM*ERSTRSVYKDRDP 1409
Score = 123 bits (264), Expect(4) = 5e-079
Identities = 59/103 (57%), Positives = 73/103 (70%)
Frame = +3 / -1
Query: 1056 EVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKSSW 1235
++SLPSES QD FLASG SGLI+ +LL +V+ +TP KS T R IA TG+ S MS SS
Sbjct: 1366 DISLPSESNQDFNFLASGDSGLITTLLLLMVDNETP*KSPTLRDLIAITGD*SAMSSSS* 1187
Query: 1236 PVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
P+ VARSF R+ TV +SSA +S GI+SLS+ LL L VGD
Sbjct: 1186 PMPVARSFHRDTTTVFLDSSAKVISLLGIISLSVLLLILMVGD 1058
Score = 91.3 bits (193), Expect(2) = e-147
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = -1 / +3
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+ Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++ LL++I+
Sbjct: 1779 NEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 1946
Score = 81.7 bits (172), Expect(3) = 7e-033
Identities = 41/109 (37%), Positives = 59/109 (54%)
Frame = +2 / -3
Query: 671 IKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHL 850
++L+ + +LL +VE +PS + +G+ H V A ++ LA PV+R K F H
Sbjct: 1751 VELIS*TSKNLLCFIVE*RNPSFSR*VGDFHRHYVP*AAFFILSLASFTPVTRVKCFCHF 1572
Query: 851 LVTGRASTVPHILIRLDVAYDGIQTEENRLFLAHSRITGDVRQKNSIRI 997
LVT S VPH L+ D AY E+ RLF I DVR+K+S+ I
Sbjct: 1571 LVTSLTSLVPHCLVWFDEAYVSPSAEKYRLFFE*RWIACDVREKHSVSI 1425
Score = 76.7 bits (161), Expect(3) = 7e-033
Identities = 43/122 (35%), Positives = 67/122 (54%)
Frame = +2 / -3
Query: 1067 AFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRYF*ALYRNNRRTVNHVQKLLASRS 1246
AFR+ P ++ S R+N SA+ +R+ L++ F L N+R ++HV LL S
Sbjct: 1355 AFRIKPRFQLFSFW*FRVNNHIASADGRQRNTLKISNFERLDCNHR*LISHV**LLTYAS 1176
Query: 1247 SKIIPERNSNSFARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNIYKLPATDVWS*L 1426
KIIP+ + NSF +I + + LR L+V+ NT RY LN++N I K ++ + L
Sbjct: 1175 CKIIPQGHHNSFP*LISQSYIPLRNHLIVSSPSNTHGRRYTLNNSNKINKFLLINIQTQL 996
Query: 1427 IN 1432
N
Sbjct: 995 FN 990
Score = 72.1 bits (151), Expect(3) = 3e-026
Identities = 45/102 (44%), Positives = 59/102 (57%)
Frame = -2 / +1
Query: 999 CILIEFFCLTSPVILLWARKSLFSSVCMPS*ATSSLIRICGTVLARPVTRR*LKLLGLDT 820
CIL E F LTS I L+++KSL+ S +*A+S+ + CGT L R VTR+* K L L T
Sbjct: 1423 CILTECFSLTSQAIHLYSKKSLYFSALGLT*ASSNQTKQCGTKLVRLVTRK*QKHLTLVT 1602
Query: 819 GARGAKRMTLSAR*DTXXXXXSPIPLVRLGCPCSTSMRRRSL 694
G + A+ +A * T SP L +LG ST +RR L
Sbjct: 1603 GVKDARESMKNAA*GT*WR*KSPTHLEKLGFRHSTMKQRRFL 1728
Score = 67.5 bits (141), Expect(3) = 3e-026
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1 / +3
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPP 1454
G+ +S+GSL++ANKQFKTV+NDYE++LNEN+ VEEA E P
Sbjct: 828 GKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIP 965
Score = 58.8 bits (122), Expect(4) = 5e-079
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3 / -1
Query: 483 ISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+S S L SAAKS GA+P TV LCLFS +YS CVTLTR * VA
Sbjct: 1942 MS*SNNLVSAAKSRGATPFTVTLCLFSPLYSFCVTLTRKT*DDHVA 1805
Score = 44.6 bits (91), Expect(4) = 5e-079
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +3 / -1
Query: 1479 ASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
ASST FSFS S*SF TVLNCLLA DP +
Sbjct: 940 ASSTSEFSFSVIS*SF*TVLNCLLASFSDPLD 845
Score = 29.0 bits (57), Expect(3) = 3e-026
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3 / +2
Query: 1283 QNCYYFSLE*SCYYDWPRAFGHG*QFSCCCDKEPKS 1176
+NC +E*SC + A HG* +C C++ +S
Sbjct: 1139 ENCCGVPVE*SCNWHRSGATRHG*SVTCDCNQVSQS 1246
Score = 24.0 bits (46), Expect(3) = 7e-033
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2 / -3
Query: 1481 FFNNSILV**QLIVIFDCLELLV 1549
F N I + LI+I +C ELLV
Sbjct: 938 FLNL*IFIQCHLIIILNCFELLV 870
>emb|BX829495.1|CNS0A17Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZC10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2002
Score = 437 bits (948), Expect(2) = e-142
Identities = 173/279 (62%), Positives = 220/279 (78%)
Frame = -1 / +3
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + E F+P ++N V I++LG YV +EL+D++GVVQSVSPT+S+RR+ DNE IPK
Sbjct: 897 VEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPK 1076
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRS 1133
RDI +AD+S KTV +SLWNDLAT GQELLDM D SPV+AIKSLKV DFQGVSLSTI RS
Sbjct: 1077 RDITLADESRKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRS 1256
Query: 1132 TLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPA 953
+ INP+ PEAK LKSW+DSEGK+ S++ I + + + G +S+Y+DR LSHITS+P+
Sbjct: 1257 NVVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSPKNGSRSLYTDRALLSHITSNPS 1436
Query: 952 MGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+ +EKPVFFS A IS IKPDQ MWY+AC TCNKKVTEA SG WCEGCQ+ ECSLRY
Sbjct: 1437 LFEEKPVFFSTRADISFIKPDQTMWYQACKTCNKKVTEALDSGDWCEGCQRKYEECSLRY 1616
Query: 772 IMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 656
IM +K++D +GE W+S FN+ AEK +GCSADEL++++ E
Sbjct: 1617 IMAVKVTDSSGETWISSFNDEAEKSLGCSADELNKLKSE 1733
Score = 127 bits (273), Expect(4) = 1e-078
Identities = 61/107 (57%), Positives = 68/107 (63%)
Frame = +3 / -1
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQA 872
P +FSA SLN + Q SP S + +MYL HS F WHPSHQ P+ ASVTFLLQV+QA
Sbjct: 1696 PRLFSASSLNDEIQVSPDESVTFTAIMYLKLHSSYFLWHPSHQSPESSASVTFLLQVLQA 1517
Query: 873 RYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
YHI SGLM LM A LK TGFS G LVM*+R S Y D P
Sbjct: 1516 WYHIVWSGLMKLMSALVLKNTGFSSNKDGLLVM*ERSARSVYKDRDP 1376
Score = 123 bits (264), Expect(4) = 1e-078
Identities = 59/103 (57%), Positives = 73/103 (70%)
Frame = +3 / -1
Query: 1056 EVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKSSW 1235
++SLPSES QD FLASG SGLI+ +LL +V+ +TP KS T R IA TG+ S MS SS
Sbjct: 1333 DISLPSESNQDFNFLASGDSGLITTLLLLMVDNETP*KSPTLRDLIAITGD*SAMSSSS* 1154
Query: 1236 PVVVARSFQREIVTVLPESSATTMSRFGIVSLSIFLLTLSVGD 1364
P+ VARSF R+ TV +SSA +S GI+SLS+ LL L VGD
Sbjct: 1153 PMPVARSFHRDTTTVFLDSSAKVISLLGIISLSVLLLILMVGD 1025
Score = 90.9 bits (192), Expect(2) = e-142
Identities = 36/54 (66%), Positives = 46/54 (85%)
Frame = -1 / +3
Query: 640 YVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++ LL++I+
Sbjct: 1752 YQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 1913
Score = 82.6 bits (174), Expect(3) = 4e-033
Identities = 43/109 (39%), Positives = 58/109 (53%)
Frame = +2 / -3
Query: 671 IKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHL 850
++L+ + LL +VE +PSL+ IG+ H V A ++ LA PV+R K F H
Sbjct: 1718 VELIS*TSKTLLCFIVE*RNPSLSR*IGDFHRHYVP*AAFFILSLASFTPVTRVKCFCHF 1539
Query: 851 LVTGRASTVPHILIRLDVAYDGIQTEENRLFLAHSRITGDVRQKNSIRI 997
LVT S VPH L+ D AY E+ RLF I DVR+K S+ I
Sbjct: 1538 LVTSLTSLVPHCLVWFDEAYVSPSAEKYRLFFE*RWIACDVREKRSVSI 1392
Score = 76.7 bits (161), Expect(3) = 4e-033
Identities = 43/122 (35%), Positives = 67/122 (54%)
Frame = +2 / -3
Query: 1067 AFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRYF*ALYRNNRRTVNHVQKLLASRS 1246
AFR+ P ++ S R+N SA+ +R+ L++ F L N+R ++HV LL S
Sbjct: 1322 AFRIKPRFQLFSFW*FRVNNHIASADGRQRNTLKISNFERLDCNHR*LISHV**LLTYAS 1143
Query: 1247 SKIIPERNSNSFARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNIYKLPATDVWS*L 1426
KIIP+ + NSF +I + + LR L+V+ NT RY LN++N I K ++ + L
Sbjct: 1142 CKIIPQGHHNSFP*LISQSYIPLRNHLIVSSPSNTHGRRYTLNNSNKINKFLLINIQTQL 963
Query: 1427 IN 1432
N
Sbjct: 962 FN 957
Score = 75.3 bits (158), Expect(3) = 3e-027
Identities = 47/102 (46%), Positives = 60/102 (58%)
Frame = -2 / +1
Query: 999 CILIEFFCLTSPVILLWARKSLFSSVCMPS*ATSSLIRICGTVLARPVTRR*LKLLGLDT 820
CIL E F LTS I L+++KSL+ S +*A+S+ + CGT L R VTR+* K L L T
Sbjct: 1390 CILTERFSLTSQAIHLYSKKSLYFSALGLT*ASSNQTKQCGTKLVRLVTRK*QKHLTLVT 1569
Query: 819 GARGAKRMTLSAR*DTXXXXXSPIPLVRLGCPCSTSMRRRSL 694
G + A+ +A * T SPI L RLG ST +RR L
Sbjct: 1570 GVKDARESMKNAA*GT*WR*KSPIHLERLGFRHSTMKQRRVL 1695
Score = 67.5 bits (141), Expect(3) = 3e-027
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1 / +3
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPP 1454
G+ +S+GSL++ANKQFKTV+NDYE++LNEN+ VEEA E P
Sbjct: 795 GKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIP 932
Score = 58.8 bits (122), Expect(4) = 1e-078
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3 / -1
Query: 483 ISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+S S L SAAKS GA+P TV LCLFS +YS CVTLTR * VA
Sbjct: 1909 MS*SNNLVSAAKSRGATPFTVTLCLFSPLYSFCVTLTRKT*DDHVA 1772
Score = 44.6 bits (91), Expect(4) = 1e-078
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +3 / -1
Query: 1479 ASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
ASST FSFS S*SF TVLNCLLA DP +
Sbjct: 907 ASSTSEFSFSVIS*SF*TVLNCLLASFSDPLD 812
Score = 29.0 bits (57), Expect(3) = 3e-027
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3 / +2
Query: 1283 QNCYYFSLE*SCYYDWPRAFGHG*QFSCCCDKEPKS 1176
+NC +E*SC + A HG* +C C++ +S
Sbjct: 1106 ENCCGVPVE*SCNWHRSGATRHG*SVTCDCNQVSQS 1213
Score = 24.0 bits (46), Expect(3) = 4e-033
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2 / -3
Query: 1481 FFNNSILV**QLIVIFDCLELLV 1549
F N I + LI+I +C ELLV
Sbjct: 905 FLNL*IFIQCHLIIILNCFELLV 837
>emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, BAC clone F13G24 (ESSA project)
Length = 88095
Score = 138 bits (297), Expect(6) = e-130
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -1 / +1
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D++GVVQSVSPT+S+RRK DNE IPKRDI +AD++ KTV +SLWNDLAT GQELLDM D
Sbjct: 80500 DVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMAD 80679
Query: 1210 SSPVVAIKSLKVSDFQGVSL 1151
+ PV+AIKSLKV FQG S+
Sbjct: 80680 NHPVIAIKSLKVGAFQGKSI 80739
Score = 117 bits (250), Expect(6) = e-130
Identities = 44/56 (78%), Positives = 45/56 (80%)
Frame = -1 / +3
Query: 940 KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+PVFFS A IS IKPDQ MWYRAC TCNKKVTEA SGYWCE CQK D ECSLRY
Sbjct: 81111 QPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRY 81278
Score = 116 bits (249), Expect(6) = e-130
Identities = 47/77 (61%), Positives = 62/77 (80%)
Frame = -1 / +3
Query: 1168 FQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSD 989
F GVSLSTI RS + INP+ PEA LKSWYD+EGK+TS++ I + + ++ G +SMYSD
Sbjct: 80805 FLGVSLSTISRSNVVINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSD 80984
Query: 988 RVFLSHITSDPAMGQEK 938
RVFLSHITS+P++G+EK
Sbjct: 80985 RVFLSHITSNPSLGEEK 81035
Score = 92.3 bits (195), Expect(6) = e-130
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = -1 / +2
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
+ + KLKEATW HLFR+SV+Q EY +EKRQRITVRG +P+DFAAE++ LL++I+K
Sbjct: 81602 NEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISK 81772
Score = 87.7 bits (185), Expect(7) = 1e-063
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = +3 / -2
Query: 1155 DTPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLPESSATTMSRFGIVSLS 1334
D P K+ T R IA TG LS MS SSWP+ VARSFQR+ TV SSA +S FGI+SLS
Sbjct: 80735 DLP*KAPTLRDLIAITG*LSAMSSSSWPMPVARSFQRDTTTVFFVSSAKVISLFGIISLS 80556
Query: 1335 IFLLTLSVGD 1364
FLL L VG+
Sbjct: 80555 FFLLMLMVGE 80526
Score = 74.4 bits (156), Expect(6) = e-130
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = -1 / +2
Query: 787 CSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 656
C +RYIM +K+SD TGE W+S FN+ AEKIIGC+AD+L+ ++ E
Sbjct: 81365 CVIRYIMAVKVSDSTGETWLSAFNDEAEKIIGCTADDLNDLKSE 81496
Score = 73.5 bits (154), Expect(7) = 1e-063
Identities = 37/55 (67%), Positives = 39/55 (70%)
Frame = +3 / -3
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRLKKTG 938
YL HS SFF SHQ P+ ASVTFLLQV+QARYHI SGLM LM A LK TG
Sbjct: 81277 YLKLHSWSFF*QLSHQ*PESIASVTFLLQVLQARYHIVWSGLMKLM*ALVLKNTG 81113
Score = 68.4 bits (143), Expect(6) = e-130
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1 / +1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPP 1454
G+ +S+GSL++ANKQFKTV+NDYE++LNEN+ VEEA E P
Sbjct: 80203 GKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTP 80340
Score = 65.7 bits (137), Expect(7) = 1e-063
Identities = 34/65 (52%), Positives = 40/65 (61%)
Frame = +3 / -1
Query: 426 QSFKNHQKDCVF*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR* 605
Q+ H K +* + +S S L SAAKS G +PLTVILCLFS +YSC TL R R*
Sbjct: 81822 QNQTKHAKS*NY*DVLFLEMSWSNNLVSAAKSIGETPLTVILCLFSLLYSC*ETLIRKR* 81643
Query: 606 GTQVA 620
QVA
Sbjct: 81642 DDQVA 81628
Score = 57.9 bits (120), Expect(3) = 7e-027
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2 / -1
Query: 1154 RHALEVRYF*ALYRNNRRTVNHVQKLLASRSSKIIPERNSNSFARVICYNNVTLRYCLVV 1333
R L+ F R+NR ++HVQ+ LA+ S IIP+ + NSF +I + ++L L+V
Sbjct: 80736 RFTLKSSNFKRFNRDNRVIISHVQQFLANASC*IIPKGHHNSFLCLISQSYISLWDHLIV 80557
Query: 1334 NLSPNTECGRYALNHTNNIYK 1396
L N R LN+T+NI+K
Sbjct: 80556 VLPSNAHGRRNTLNNTDNIWK 80494
Score = 56.5 bits (117), Expect(3) = 7e-027
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +2 / -2
Query: 785 ALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHILIRLDVAYDGIQTEENRL 940
A V+ L P++R FS+ LVTG ASTVPH L+ LD AY EE RL
Sbjct: 81266 AFLVLFLTTFTPITRVHCFSNFLVTGLASTVPHCLVWLDEAYVSSSAEEYRL 81111
Score = 49.6 bits (102), Expect(7) = 1e-063
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +3 / -3
Query: 1056 EVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTP 1163
+VS PS SYQD F+ASG+ G I+ +LL IV+ +TP
Sbjct: 80917 DVSFPSASYQDFNFVASGELGFITTLLLLIVDNETP 80810
Score = 47.3 bits (97), Expect(3) = 7e-027
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2 / -2
Query: 938 LFLAHSRITGDVRQKNSIRIHGLETTSACGTHFCTDWCQ*SIFAFRVIPGLKILSLRQVR 1117
L LA I DVR+KNS+RIHG + TH T+ +F F +IP ++ S ++R
Sbjct: 81035 LLLA*RGIACDVRKKNSVRIHGS*SVVGRRTHPRTNSRHRCLFPFSIIPRFQLCSFWRIR 80856
Query: 1118 INLESTSANS 1147
+ SA+S
Sbjct: 80855 VYHHIASADS 80826
Score = 44.1 bits (90), Expect(7) = 1e-063
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +3 / -2
Query: 1479 ASSTIAFSFSDNS*SFLTVLNCLLAILRDPFE 1574
ASST FSF S*SF TVLNCLLA L DP +
Sbjct: 80315 ASSTSEFSFRVIS*SF*TVLNCLLASLSDPLD 80220
Score = 44.1 bits (90), Expect(7) = 1e-063
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / -1
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYL 779
QP+IFSA SLN D Q SPV SE+ ++YL
Sbjct: 81462 QPIIFSASSLNADNQVSPVESETFTAIIYL 81373
Score = 42.3 bits (86), Expect(7) = 1e-063
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +3 / -3
Query: 939 FSWPIAGSLVM*DRKTLSEYMDLKP 1013
FS P G LVM*+RKTLSEYMDL P
Sbjct: 81034 FSSPKEGLLVM*ERKTLSEYMDLDP 80960
>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project)
Length = 89988
Score = 138 bits (297), Expect(5) = e-128
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -1 / +3
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D++GVVQSVSPT+S+RRK DNE IPKRDI +AD++ KTV +SLWNDLAT GQELLDM D
Sbjct: 258 DVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMAD 437
Query: 1210 SSPVVAIKSLKVSDFQGVSL 1151
+ PV+AIKSLKV FQG S+
Sbjct: 438 NHPVIAIKSLKVGAFQGKSI 497
Score = 117 bits (250), Expect(5) = e-128
Identities = 44/56 (78%), Positives = 45/56 (80%)
Frame = -1 / +2
Query: 940 KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+PVFFS A IS IKPDQ MWYRAC TCNKKVTEA SGYWCE CQK D ECSLRY
Sbjct: 869 QPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRY 1036
Score = 116 bits (249), Expect(5) = e-128
Identities = 47/77 (61%), Positives = 62/77 (80%)
Frame = -1 / +2
Query: 1168 FQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSD 989
F GVSLSTI RS + INP+ PEA LKSWYD+EGK+TS++ I + + ++ G +SMYSD
Sbjct: 563 FLGVSLSTISRSNVVINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSD 742
Query: 988 RVFLSHITSDPAMGQEK 938
RVFLSHITS+P++G+EK
Sbjct: 743 RVFLSHITSNPSLGEEK 793
Score = 92.3 bits (195), Expect(5) = e-128
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = -1 / +1
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
+ + KLKEATW HLFR+SV+Q EY +EKRQRITVRG +P+DFAAE++ LL++I+K
Sbjct: 1360 NEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISK 1530
Score = 87.7 bits (185), Expect(7) = 6e-061
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = +3 / -3
Query: 1155 DTPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLPESSATTMSRFGIVSLS 1334
D P K+ T R IA TG LS MS SSWP+ VARSFQR+ TV SSA +S FGI+SLS
Sbjct: 493 DLP*KAPTLRDLIAITG*LSAMSSSSWPMPVARSFQRDTTTVFFVSSAKVISLFGIISLS 314
Query: 1335 IFLLTLSVGD 1364
FLL L VG+
Sbjct: 313 FFLLMLMVGE 284
Score = 74.4 bits (156), Expect(5) = e-128
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = -1 / +1
Query: 787 CSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 656
C +RYIM +K+SD TGE W+S FN+ AEKIIGC+AD+L+ ++ E
Sbjct: 1123 CVIRYIMAVKVSDSTGETWLSAFNDEAEKIIGCTADDLNDLKSE 1254
Score = 73.5 bits (154), Expect(7) = 6e-061
Identities = 37/55 (67%), Positives = 39/55 (70%)
Frame = +3 / -1
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRLKKTG 938
YL HS SFF SHQ P+ ASVTFLLQV+QARYHI SGLM LM A LK TG
Sbjct: 1035 YLKLHSWSFF*QLSHQ*PESIASVTFLLQVLQARYHIVWSGLMKLM*ALVLKNTG 871
Score = 65.7 bits (137), Expect(7) = 6e-061
Identities = 34/65 (52%), Positives = 40/65 (61%)
Frame = +3 / -2
Query: 426 QSFKNHQKDCVF*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR* 605
Q+ H K +* + +S S L SAAKS G +PLTVILCLFS +YSC TL R R*
Sbjct: 1580 QNQTKHAKS*NY*DVLFLEMSWSNNLVSAAKSIGETPLTVILCLFSLLYSC*ETLIRKR* 1401
Query: 606 GTQVA 620
QVA
Sbjct: 1400 DDQVA 1386
Score = 57.9 bits (120), Expect(3) = 7e-027
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2 / -2
Query: 1154 RHALEVRYF*ALYRNNRRTVNHVQKLLASRSSKIIPERNSNSFARVICYNNVTLRYCLVV 1333
R L+ F R+NR ++HVQ+ LA+ S IIP+ + NSF +I + ++L L+V
Sbjct: 494 RFTLKSSNFKRFNRDNRVIISHVQQFLANASC*IIPKGHHNSFLCLISQSYISLWDHLIV 315
Query: 1334 NLSPNTECGRYALNHTNNIYK 1396
L N R LN+T+NI+K
Sbjct: 314 VLPSNAHGRRNTLNNTDNIWK 252
Score = 56.5 bits (117), Expect(3) = 7e-027
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +2 / -3
Query: 785 ALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHILIRLDVAYDGIQTEENRL 940
A V+ L P++R FS+ LVTG ASTVPH L+ LD AY EE RL
Sbjct: 1024 AFLVLFLTTFTPITRVHCFSNFLVTGLASTVPHCLVWLDEAYVSSSAEEYRL 869
Score = 49.6 bits (102), Expect(7) = 6e-061
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +3 / -1
Query: 1056 EVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTP 1163
+VS PS SYQD F+ASG+ G I+ +LL IV+ +TP
Sbjct: 675 DVSFPSASYQDFNFVASGELGFITTLLLLIVDNETP 568
Score = 47.3 bits (97), Expect(3) = 7e-027
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2 / -3
Query: 938 LFLAHSRITGDVRQKNSIRIHGLETTSACGTHFCTDWCQ*SIFAFRVIPGLKILSLRQVR 1117
L LA I DVR+KNS+RIHG + TH T+ +F F +IP ++ S ++R
Sbjct: 793 LLLA*RGIACDVRKKNSVRIHGS*SVVGRRTHPRTNSRHRCLFPFSIIPRFQLCSFWRIR 614
Query: 1118 INLESTSANS 1147
+ SA+S
Sbjct: 613 VYHHIASADS 584
Score = 44.1 bits (90), Expect(7) = 6e-061
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / -2
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYL 779
QP+IFSA SLN D Q SPV SE+ ++YL
Sbjct: 1220 QPIIFSASSLNADNQVSPVESETFTAIIYL 1131
Score = 42.3 bits (86), Expect(7) = 6e-061
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +3 / -1
Query: 939 FSWPIAGSLVM*DRKTLSEYMDLKP 1013
FS P G LVM*+RKTLSEYMDL P
Sbjct: 792 FSSPKEGLLVM*ERKTLSEYMDLDP 718
Score = 35.0 bits (70), Expect(7) = 6e-061
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +3 / -3
Query: 1479 ASSTIAFSFSDNS*SFLTVLNCLL 1550
ASST FSF S*SF TVLNCLL
Sbjct: 73 ASSTSEFSFRVIS*SF*TVLNCLL 2
>dbj|AB008269.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSL3
Length = 61634
Score = 139 bits (299), Expect(6) = e-118
Identities = 57/76 (75%), Positives = 66/76 (86%)
Frame = -1 / -3
Query: 1384 VGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
+GVVQSVSPT+S+RR+ DNE IPKRDI +AD+S KTV +SLWNDLAT GQELLDM D S
Sbjct: 61632 IGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIGQELLDMADQS 61453
Query: 1204 PVVAIKSLKVSDFQGV 1157
PV+AIKSLKV DFQG+
Sbjct: 61452 PVIAIKSLKVGDFQGM 61405
Score = 110 bits (235), Expect(6) = e-118
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -1 / -1
Query: 943 EKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
++PVFFS A IS IKPDQ MWY+AC TCNKKVTEA SGYWCEGCQ+ ECSLR
Sbjct: 60932 DQPVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLR 60765
Score = 91.3 bits (193), Expect(6) = e-118
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+ Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++ LL++I+
Sbjct: 60444 NEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 60277
Score = 83.5 bits (176), Expect(4) = 2e-043
Identities = 39/62 (62%), Positives = 42/62 (67%)
Frame = +3 / +1
Query: 753 ESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRLKK 932
ES + YL HS F WHPSHQ P+ ASVTFLLQV+QA YHI SGLM LM A LK
Sbjct: 60742 ESKEYLSYLKLHSSYFLWHPSHQ*PESSASVTFLLQVLQAWYHIVWSGLMKLM*ALVLKN 60921
Query: 933 TG 938
TG
Sbjct: 60922 TG 60927
Score = 76.7 bits (161), Expect(4) = 2e-043
Identities = 38/68 (55%), Positives = 45/68 (66%)
Frame = +3 / +2
Query: 1161 PWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLPESSATTMSRFGIVSLSIF 1340
P KS T R IA TG+ S MS SS P+ VARSF R+ TV +SSA +S GI+SLS+
Sbjct: 61409 P*KSPTLRDLIAITGD*SAMSSSS*PMPVARSFHRDTTTVFLDSSAKVISLLGIISLSVL 61588
Query: 1341 LLTLSVGD 1364
LL L VGD
Sbjct: 61589 LLILMVGD 61612
Score = 70.7 bits (148), Expect(6) = e-118
Identities = 24/41 (58%), Positives = 35/41 (85%)
Frame = -1 / -1
Query: 778 RYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 656
RYIM +K++D +GE W+S FN+ AEKI+GCSADEL++++ E
Sbjct: 60668 RYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSE 60546
Score = 58.8 bits (122), Expect(4) = 2e-043
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3 / +2
Query: 483 ISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+S S L SAAKS GA+P TV LCLFS +YS CVTLTR * VA
Sbjct: 60281 MS*SNNLVSAAKSRGATPFTVTLCLFSPLYSFCVTLTRKT*DDHVA 60418
Score = 58.8 bits (122), Expect(6) = e-118
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = -1 / -3
Query: 1081 YDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEK 938
+DSEGK+ S++ I + + + G +S+Y+DRV LSHITS+P++ +EK
Sbjct: 61158 FDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEK 61015
Score = 52.4 bits (108), Expect(6) = e-118
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1 / -2
Query: 1162 GVSLSTIGRSTLEINPDLPEAKNLKSWY 1079
GVSLSTI RS + INP+ PEAK LKSWY
Sbjct: 61327 GVSLSTISRSNVVINPESPEAKKLKSWY 61244
Score = 43.2 bits (88), Expect(4) = 2e-043
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3 / +3
Query: 1074 ESYQDLRFLASGKSGLISRVLLPIVERDTP 1163
++YQD FLASG SGLI+ +LL +V+ +TP
Sbjct: 61239 KAYQDFNFLASGDSGLITTLLLLMVDNETP 61328
>dbj|AK220794.1| Arabidopsis thaliana mRNA for RNA helicase, partial cds, clone:
RAFL22-28-F10
Length = 877
Score = 315 bits (682), Expect(2) = e-105
Identities = 122/189 (64%), Positives = 153/189 (80%)
Frame = -1 / +3
Query: 1213 DSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
D SPV+AIKSLKV DFQGVSLSTI RS + INP+ PEAK LKSW+DSEGK+ S++ I +
Sbjct: 3 DQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSG 182
Query: 1033 VGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCN 854
+ + G +S+Y+DRV LSHITS+P++ +EKPVFFS A IS IKPDQ MWY+AC TCN
Sbjct: 183 MSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISFIKPDQTMWYQACKTCN 362
Query: 853 KKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADEL 674
KKVTEA SGYWCEGCQ+ ECSLRYIM +K++D +GE W+S FN+ AEKI+GCSADEL
Sbjct: 363 KKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADEL 542
Query: 673 DRIRKEEGD 647
++++ EEG+
Sbjct: 543 NKLKSEEGE 569
Score = 128 bits (275), Expect(3) = 3e-054
Identities = 63/107 (58%), Positives = 69/107 (64%)
Frame = +3 / -1
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQA 872
P IFSA SLN + Q SP S + +MYL HS F WHPSHQ P+ ASVTFLLQV+QA
Sbjct: 523 PRIFSASSLNDEIQVSPDESVTFTAIMYLKLHSSYFLWHPSHQ*PESSASVTFLLQVLQA 344
Query: 873 RYHIF*SGLMWLMMAYRLKKTGFSWPIAGSLVM*DRKTLSEYMDLKP 1013
YHI SGLM LM A LK TGFS G LVM*+R T S Y D P
Sbjct: 343 WYHIVWSGLMKLM*ALVLKNTGFSSNKDGLLVM*ERSTRSVYKDRDP 203
Score = 91.3 bits (193), Expect(2) = e-105
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = -1 / +3
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+ Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++ LL++I+
Sbjct: 573 NEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 740
Score = 67.0 bits (140), Expect(3) = 3e-054
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +3 / -1
Query: 1056 EVSLPSESYQDLRFLASGKSGLISRVLLPIVERDTPWKSDTFRLFIATTGE 1208
++SLPSES QD FLASG SGLI+ +LL +V+ +TP KS T R IA TG+
Sbjct: 160 DISLPSESNQDFNFLASGDSGLITTLLLLMVDNETP*KSPTLRDLIAITGD 8
Score = 58.8 bits (122), Expect(3) = 3e-054
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3 / -1
Query: 483 ISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
+S S L SAAKS GA+P TV LCLFS +YS CVTLTR * VA
Sbjct: 736 MS*SNNLVSAAKSRGATPFTVTLCLFSPLYSFCVTLTRKT*DDHVA 599
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 143 bits (307), Expect(2) = 4e-054
Identities = 58/78 (74%), Positives = 68/78 (87%)
Frame = -1 / -1
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D++GVVQSVSPT+S+RR+ DNE IPKRDI +AD+S KTV +SLWNDLAT GQELLDM D
Sbjct: 24568293 DLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIGQELLDMAD 24568114
Query: 1210 SSPVVAIKSLKVSDFQGV 1157
SPV+AIKSLKV DFQG+
Sbjct: 24568113 QSPVIAIKSLKVGDFQGM 24568060
Score = 138 bits (297), Expect(3) = 1e-089
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -1 / +1
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D++GVVQSVSPT+S+RRK DNE IPKRDI +AD++ KTV +SLWNDLAT GQELLDM D
Sbjct: 2573590 DVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMAD 2573769
Query: 1210 SSPVVAIKSLKVSDFQGVSL 1151
+ PV+AIKSLKV FQG S+
Sbjct: 2573770 NHPVIAIKSLKVGAFQGKSI 2573829
Score = 117 bits (250), Expect(3) = 1e-089
Identities = 44/56 (78%), Positives = 45/56 (80%)
Frame = -1 / +3
Query: 940 KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+PVFFS A IS IKPDQ MWYRAC TCNKKVTEA SGYWCE CQK D ECSLRY
Sbjct: 2574201 QPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRY 2574368
Score = 116 bits (249), Expect(3) = 1e-089
Identities = 47/77 (61%), Positives = 62/77 (80%)
Frame = -1 / +3
Query: 1168 FQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSD 989
F GVSLSTI RS + INP+ PEA LKSWYD+EGK+TS++ I + + ++ G +SMYSD
Sbjct: 2573895 FLGVSLSTISRSNVVINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSD 2574074
Query: 988 RVFLSHITSDPAMGQEK 938
RVFLSHITS+P++G+EK
Sbjct: 2574075 RVFLSHITSNPSLGEEK 2574125
Score = 110 bits (235), Expect(2) = 4e-054
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -1 / -2
Query: 943 EKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
++PVFFS A IS IKPDQ MWY+AC TCNKKVTEA SGYWCEGCQ+ ECSLR
Sbjct: 24567587 DQPVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLR 24567420
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 142 bits (304), Expect(2) = 9e-054
Identities = 57/81 (70%), Positives = 69/81 (85%)
Frame = -1 / -1
Query: 1399 ELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLD 1220
+++ +GVVQSVSPT+S+RR+ DNE IPKRDI +AD+S KTV +SLWNDLAT GQELLD
Sbjct: 21806389 KIIKFIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIGQELLD 21806210
Query: 1219 MVDSSPVVAIKSLKVSDFQGV 1157
M D SPV+AIKSLKV DFQG+
Sbjct: 21806209 MADQSPVIAIKSLKVGDFQGM 21806147
Score = 138 bits (297), Expect(3) = 1e-089
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -1 / +3
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D++GVVQSVSPT+S+RRK DNE IPKRDI +AD++ KTV +SLWNDLAT GQELLDM D
Sbjct: 2392626 DVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMAD 2392805
Query: 1210 SSPVVAIKSLKVSDFQGVSL 1151
+ PV+AIKSLKV FQG S+
Sbjct: 2392806 NHPVIAIKSLKVGAFQGKSI 2392865
Score = 117 bits (250), Expect(3) = 1e-089
Identities = 44/56 (78%), Positives = 45/56 (80%)
Frame = -1 / +2
Query: 940 KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRY 773
+PVFFS A IS IKPDQ MWYRAC TCNKKVTEA SGYWCE CQK D ECSLRY
Sbjct: 2393237 QPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRY 2393404
Score = 116 bits (249), Expect(3) = 1e-089
Identities = 47/77 (61%), Positives = 62/77 (80%)
Frame = -1 / +2
Query: 1168 FQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSD 989
F GVSLSTI RS + INP+ PEA LKSWYD+EGK+TS++ I + + ++ G +SMYSD
Sbjct: 2392931 FLGVSLSTISRSNVVINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSD 2393110
Query: 988 RVFLSHITSDPAMGQEK 938
RVFLSHITS+P++G+EK
Sbjct: 2393111 RVFLSHITSNPSLGEEK 2393161
Score = 110 bits (235), Expect(2) = 9e-054
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -1 / -2
Query: 943 EKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
++PVFFS A IS IKPDQ MWY+AC TCNKKVTEA SGYWCEGCQ+ ECSLR
Sbjct: 21805674 DQPVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLR 21805507
>gb|B61339.1|B61339 T22D6TF TAMU Arabidopsis thaliana genomic clone T22D6, DNA sequence
Length = 691
Score = 138 bits (297), Expect(3) = 1e-053
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -1 / +3
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D++GVVQSVSPT+S+RRK DNE IPKRDI +AD++ KTV +SLWNDLAT GQELLDM D
Sbjct: 258 DVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMAD 437
Query: 1210 SSPVVAIKSLKVSDFQGVSL 1151
+ PV+AIKSLKV FQG S+
Sbjct: 438 NHPVIAIKSLKVGAFQGKSI 497
Score = 87.7 bits (185), Expect(3) = 2e-027
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = +3 / -1
Query: 1155 DTPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLPESSATTMSRFGIVSLS 1334
D P K+ T R IA TG LS MS SSWP+ VARSFQR+ TV SSA +S FGI+SLS
Sbjct: 493 DLP*KAPTLRDLIAITG*LSAMSSSSWPMPVARSFQRDTTTVFFVSSAKVISLFGIISLS 314
Query: 1335 IFLLTLSVGD 1364
FLL L VG+
Sbjct: 313 FFLLMLMVGE 284
Score = 65.2 bits (136), Expect(3) = 1e-053
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -1 / +2
Query: 1168 FQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 1043
F VSLSTI RS + INP+ PEA LKSWYD+EGK+TS++ I
Sbjct: 563 FLCVSLSTISRSNVVINPNSPEATKLKSWYDAEGKETSMSAI 688
Score = 53.8 bits (111), Expect(3) = 1e-053
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -1 / +3
Query: 1549 NKQFKTVKNDYELSLNENAIVEEAEGETFLPP 1454
NKQFKTV+NDYE++LNEN+ VEEA E P
Sbjct: 3 NKQFKTVQNDYEMTLNENSEVEEASNEEMFTP 98
Score = 46.9 bits (96), Expect(3) = 2e-027
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 1044 IGASEVSLPSESYQDLRFLASGKSGLISRVLLPIVERDT 1160
I +VS PS SYQD F+ASG+ G I+ +LL IV+ +T
Sbjct: 687 IADMDVSFPSASYQDFNFVASGELGFITTLLLLIVDNET 571
Score = 35.0 bits (70), Expect(3) = 2e-027
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +3 / -1
Query: 1479 ASSTIAFSFSDNS*SFLTVLNCLL 1550
ASST FSF S*SF TVLNCLL
Sbjct: 73 ASSTSEFSFRVIS*SF*TVLNCLL 2
>emb|AL094383.1|CNS00X3L Arabidopsis thaliana genome survey sequence SP6 end of BAC T13B19
of TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 660
Score = 83.5 bits (176), Expect(3) = 1e-043
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = -1 / +2
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+ Y KLKEATW H+FRVSVTQ+EY EKRQR TV+G AP+DFAAE++ + ++I+
Sbjct: 413 NEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRGTVKGVAPLDFAAETRLVPQDIS 580
Score = 70.7 bits (148), Expect(3) = 1e-043
Identities = 24/41 (58%), Positives = 35/41 (85%)
Frame = -1 / +3
Query: 778 RYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 656
RYIM +K++D +GE W+S FN+ AEKI+GCSADEL++++ E
Sbjct: 189 RYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSE 311
Score = 64.8 bits (135), Expect(3) = 1e-043
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -1 / +3
Query: 862 TCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
TCNKKVTEA SGYWCEGCQ+ ECSLR
Sbjct: 6 TCNKKVTEALDSGYWCEGCQRKYEECSLR 92
>gb|BT005946.1| Arabidopsis thaliana At2g06510 gene, complete cds
Length = 1923
Score = 73.0 bits (153), Expect(5) = 2e-040
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKDT+ IS +
Sbjct: 1186 PVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRD 1356
Score = 72.5 bits (152), Expect(5) = 2e-040
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = -1 / +1
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F E E+I+GC A
Sbjct: 1534 CNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAK 1713
Query: 679 ELDRIRKE 656
+L ++ E
Sbjct: 1714 KLYAMKYE 1737
Score = 39.6 bits (80), Expect(5) = 2e-040
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -1 / +1
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
+R + + D+SGK V ++LW + G++L +MVDS+
Sbjct: 1069 RRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSA 1179
Score = 36.8 bits (74), Expect(5) = 2e-040
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1 / +1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQ 1448
G+ +SKGSL+ A K F +KN++E+ L + VE E P Q
Sbjct: 796 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQ 939
Score = 35.0 bits (70), Expect(5) = 2e-040
Identities = 12/60 (20%), Positives = 36/60 (60%)
Frame = -1 / +1
Query: 655 EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
E ++ + +++ + ++ ++ + + Y +E+R ++TV V++ +ESKY+L+ + +
Sbjct: 1741 EKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 1920
>emb|BX821009.1|CNS0AA0D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH90ZD09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2090
Score = 73.0 bits (153), Expect(5) = 2e-040
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKDT+ IS +
Sbjct: 1268 PVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRD 1438
Score = 72.5 bits (152), Expect(5) = 2e-040
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = -1 / +2
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F E E+I+GC A
Sbjct: 1616 CNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAK 1795
Query: 679 ELDRIRKE 656
+L ++ E
Sbjct: 1796 KLYAMKYE 1819
Score = 39.6 bits (80), Expect(5) = 2e-040
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -1 / +2
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
+R + + D+SGK V ++LW + G++L +MVDS+
Sbjct: 1151 RRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSA 1261
Score = 36.8 bits (74), Expect(5) = 2e-040
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1 / +3
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQ 1448
G+ +SKGSL+ A K F +KN++E+ L + VE E P Q
Sbjct: 879 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQ 1022
Score = 35.0 bits (70), Expect(5) = 2e-040
Identities = 12/60 (20%), Positives = 36/60 (60%)
Frame = -1 / +2
Query: 655 EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
E ++ + +++ + ++ ++ + + Y +E+R ++TV V++ +ESKY+L+ + +
Sbjct: 1823 EKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 2002
>dbj|AK118699.1| Arabidopsis thaliana At2g06510 mRNA for putative replication protein
A1, complete cds, clone: RAFL19-96-J08
Length = 2110
Score = 73.0 bits (153), Expect(5) = 2e-040
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -1 / +3
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKDT+ IS +
Sbjct: 1293 PVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRD 1463
Score = 72.5 bits (152), Expect(5) = 2e-040
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = -1 / +3
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F E E+I+GC A
Sbjct: 1641 CNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAK 1820
Query: 679 ELDRIRKE 656
+L ++ E
Sbjct: 1821 KLYAMKYE 1844
Score = 39.6 bits (80), Expect(5) = 2e-040
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -1 / +3
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
+R + + D+SGK V ++LW + G++L +MVDS+
Sbjct: 1176 RRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSA 1286
Score = 36.8 bits (74), Expect(5) = 2e-040
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1 / +3
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQ 1448
G+ +SKGSL+ A K F +KN++E+ L + VE E P Q
Sbjct: 903 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQ 1046
Score = 35.0 bits (70), Expect(5) = 2e-040
Identities = 12/60 (20%), Positives = 36/60 (60%)
Frame = -1 / +3
Query: 655 EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
E ++ + +++ + ++ ++ + + Y +E+R ++TV V++ +ESKY+L+ + +
Sbjct: 1848 EKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 2027
>ref|NM_201704.1| Arabidopsis thaliana DNA binding / nucleic acid binding AT2G06510
transcript variant AT2G06510.2 mRNA, complete cds
Length = 2613
Score = 73.0 bits (153), Expect(5) = 5e-040
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKDT+ IS +
Sbjct: 1187 PVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRD 1357
Score = 72.5 bits (152), Expect(5) = 5e-040
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = -1 / +2
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F E E+I+GC A
Sbjct: 1535 CNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAK 1714
Query: 679 ELDRIRKE 656
+L ++ E
Sbjct: 1715 KLYAMKYE 1738
Score = 39.6 bits (80), Expect(5) = 5e-040
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -1 / +2
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
+R + + D+SGK V ++LW + G++L +MVDS+
Sbjct: 1070 RRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSA 1180
Score = 36.8 bits (74), Expect(5) = 5e-040
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1 / +2
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQ 1448
G+ +SKGSL+ A K F +KN++E+ L + VE E P Q
Sbjct: 797 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQ 940
Score = 35.0 bits (70), Expect(5) = 5e-040
Identities = 12/60 (20%), Positives = 36/60 (60%)
Frame = -1 / +2
Query: 655 EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
E ++ + +++ + ++ ++ + + Y +E+R ++TV V++ +ESKY+L+ + +
Sbjct: 1742 EKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 1921
>ref|NM_126648.2| Arabidopsis thaliana DNA binding / nucleic acid binding AT2G06510
transcript variant AT2G06510.1 mRNA, complete cds
Length = 2717
Score = 73.0 bits (153), Expect(5) = 6e-040
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKDT+ IS +
Sbjct: 1291 PVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRD 1461
Score = 72.5 bits (152), Expect(5) = 6e-040
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = -1 / +1
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F E E+I+GC A
Sbjct: 1639 CNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAK 1818
Query: 679 ELDRIRKE 656
+L ++ E
Sbjct: 1819 KLYAMKYE 1842
Score = 39.6 bits (80), Expect(5) = 6e-040
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -1 / +1
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
+R + + D+SGK V ++LW + G++L +MVDS+
Sbjct: 1174 RRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSA 1284
Score = 36.8 bits (74), Expect(5) = 6e-040
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1 / +1
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQ 1448
G+ +SKGSL+ A K F +KN++E+ L + VE E P Q
Sbjct: 901 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQ 1044
Score = 35.0 bits (70), Expect(5) = 6e-040
Identities = 12/60 (20%), Positives = 36/60 (60%)
Frame = -1 / +1
Query: 655 EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
E ++ + +++ + ++ ++ + + Y +E+R ++TV V++ +ESKY+L+ + +
Sbjct: 1846 EKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 2025
>gb|AU227819.1|AU227819 AU227819 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-25-L07 3',
mRNA sequence
Length = 449
Score = 91.3 bits (193), Expect(2) = 6e-037
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = -1 / -2
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+ Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++ LL++I+
Sbjct: 295 NEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 128
Score = 86.8 bits (183), Expect(2) = 6e-037
Identities = 30/48 (62%), Positives = 42/48 (87%)
Frame = -1 / -2
Query: 790 ECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD 647
ECSLRYIM +K++D +GE W+S FN+ AEKI+GCSADEL++++ EEG+
Sbjct: 442 ECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSEEGE 299
>gb|BX834955.1|BX834955 BX834955 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH69ZB04 3PRIM, mRNA
sequence
Length = 1030
Score = 73.0 bits (153), Expect(4) = 8e-037
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -1 / -3
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKDT+ IS +
Sbjct: 776 PVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRD 606
Score = 72.5 bits (152), Expect(4) = 8e-037
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = -1 / -3
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F E E+I+GC A
Sbjct: 428 CNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAK 249
Query: 679 ELDRIRKE 656
+L ++ E
Sbjct: 248 KLYAMKYE 225
Score = 41.4 bits (84), Expect(4) = 8e-037
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -1 / -3
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
+R + + D+SGK V ++LW + G++L +MVDS+
Sbjct: 893 RRSLNLKDESGKAVEVTLWGEFCNRVGRQLEEMVDSA 783
Score = 35.0 bits (70), Expect(4) = 8e-037
Identities = 12/60 (20%), Positives = 36/60 (60%)
Frame = -1 / -3
Query: 655 EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
E ++ + +++ + ++ ++ + + Y +E+R ++TV V++ +ESKY+L+ + +
Sbjct: 221 EKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 42
>gb|AF439837.1|AF439837 Arabidopsis thaliana AT4g19130/T18B16_100 mRNA sequence
Length = 1584
Score = 66.6 bits (139), Expect(5) = 4e-036
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+K+ ++S+F G ++STIG S L I+PD EA+ LK+W++ EGK +S E
Sbjct: 367 PVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISLSRE 537
Score = 65.7 bits (137), Expect(5) = 4e-036
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = -1 / +1
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
C+KKVT+ + CE C K+ EC RYI+ +++ D T V+ F E E+I+G SA
Sbjct: 709 CSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAK 888
Query: 679 ELDRIRKEEGDD 644
+L ++ E D+
Sbjct: 889 DLYYVKNEHKDE 924
Score = 40.5 bits (82), Expect(5) = 4e-036
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1 / +1
Query: 1318 PKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
PKR + + D SG++V +++W D GQ L + DS
Sbjct: 247 PKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDS 357
Score = 34.1 bits (68), Expect(5) = 4e-036
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = -1 / +1
Query: 1396 LVDIVGVVQSVSPTLSVRRK 1337
+VD++G+V S+SPT+++ RK
Sbjct: 172 IVDVIGIVSSISPTVTITRK 231
Score = 33.6 bits (67), Expect(5) = 4e-036
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1 / +1
Query: 1567 GSLRIANKQFKTVKNDYELSLNENAIVEEAEGE 1469
GSLR A K F ++NDYE+ L+ + +++ E
Sbjct: 1 GSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEE 99
>ref|NM_118032.1| Arabidopsis thaliana DNA binding / nucleic acid binding AT4G19130
mRNA, complete cds
Length = 1584
Score = 66.6 bits (139), Expect(5) = 4e-036
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+K+ ++S+F G ++STIG S L I+PD EA+ LK+W++ EGK +S E
Sbjct: 367 PVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISLSRE 537
Score = 65.7 bits (137), Expect(5) = 4e-036
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = -1 / +1
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
C+KKVT+ + CE C K+ EC RYI+ +++ D T V+ F E E+I+G SA
Sbjct: 709 CSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAK 888
Query: 679 ELDRIRKEEGDD 644
+L ++ E D+
Sbjct: 889 DLYYVKNEHKDE 924
Score = 40.5 bits (82), Expect(5) = 4e-036
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1 / +1
Query: 1318 PKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
PKR + + D SG++V +++W D GQ L + DS
Sbjct: 247 PKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDS 357
Score = 34.1 bits (68), Expect(5) = 4e-036
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = -1 / +1
Query: 1396 LVDIVGVVQSVSPTLSVRRK 1337
+VD++G+V S+SPT+++ RK
Sbjct: 172 IVDVIGIVSSISPTVTITRK 231
Score = 33.6 bits (67), Expect(5) = 4e-036
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1 / +1
Query: 1567 GSLRIANKQFKTVKNDYELSLNENAIVEEAEGE 1469
GSLR A K F ++NDYE+ L+ + +++ E
Sbjct: 1 GSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEE 99
>gb|AA067503.1|AA067503 26348 Lambda-PRL2 Arabidopsis thaliana cDNA clone 92B6T7, mRNA
sequence
Length = 535
Score = 149 bits (321), Expect = 2e-034
Identities = 60/102 (58%), Positives = 78/102 (76%)
Frame = -1 / +1
Query: 1492 IVEEAEGETFLPPVQYNLVKIDQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPK 1313
+ E + E F+P ++N V I++LG YV +EL+D++GVVQSVSPT+S+RR+ DN IPK
Sbjct: 37 VEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNXMIPK 216
Query: 1312 RDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSSPVVAIK 1187
R I +AD+S KTV +SLWN LAT GQELLDM D SPV+AIK
Sbjct: 217 RXITLADESRKTVVVSLWNXLATXIGQELLDMADQSPVIAIK 342
>gb|AC006420.4| Arabidopsis thaliana chromosome 2 clone T12H3 map ve013, complete
sequence
Length = 96332
Score = 73.0 bits (153), Expect(5) = 5e-034
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -1 / +3
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKDT+ IS +
Sbjct: 28755 PVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRD 28925
Score = 72.5 bits (152), Expect(5) = 5e-034
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = -1 / +3
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
CNKKVT + + + C+ C + EC RY++ +++ D TG W++ F E E+I+GC A
Sbjct: 29103 CNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAK 29282
Query: 679 ELDRIRKE 656
+L ++ E
Sbjct: 29283 KLYAMKYE 29306
Score = 39.6 bits (80), Expect(5) = 5e-034
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -1 / +3
Query: 1315 KRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
+R + + D+SGK V ++LW + G++L +MVDS+
Sbjct: 28638 RRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSA 28748
Score = 36.8 bits (74), Expect(5) = 5e-034
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1 / +3
Query: 1591 GRGTRVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGETFLPPVQ 1448
G+ +SKGSL+ A K F +KN++E+ L + VE E P Q
Sbjct: 28365 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQ 28508
Score = 35.0 bits (70), Expect(5) = 5e-034
Identities = 12/60 (20%), Positives = 36/60 (60%)
Frame = -1 / +3
Query: 655 EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
E ++ + +++ + ++ ++ + + Y +E+R ++TV V++ +ESKY+L+ + +
Sbjct: 29310 EKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 29489
>gb|BX834777.1|BX834777 BX834777 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH43ZE08 3PRIM, mRNA
sequence
Length = 1011
Score = 72.1 bits (151), Expect(4) = 8e-033
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = -1 / -3
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAP 1046
PV+AIK+ KVSDF G S+ TI + L INPD PEA L++W+D GKDT +P
Sbjct: 826 PVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTLPSP 668
Score = 62.0 bits (129), Expect(4) = 8e-033
Identities = 21/66 (31%), Positives = 39/66 (59%)
Frame = -1 / -3
Query: 853 KKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADEL 674
+ VT + + + C+ C + EC RY++ +++ D TG W++ F E E+I+GC A +L
Sbjct: 472 RSVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKL 293
Query: 673 DRIRKE 656
++ E
Sbjct: 292 YAMKYE 275
Score = 39.1 bits (79), Expect(4) = 8e-033
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1 / -3
Query: 1318 PKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDSS 1205
P D + D+SGK V ++LW + G++L +MVDS+
Sbjct: 946 PIGDPDLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSA 833
Score = 35.0 bits (70), Expect(4) = 8e-033
Identities = 12/60 (20%), Positives = 36/60 (60%)
Frame = -1 / -3
Query: 655 EGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAK 476
E ++ + +++ + ++ ++ + + Y +E+R ++TV V++ +ESKY+L+ + +
Sbjct: 271 EKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 92
>gb|BP839839.1|BP839839 BP839839 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-28-F10 5',
mRNA sequence
Length = 410
Score = 95.0 bits (201), Expect(3) = 3e-032
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = -1 / +1
Query: 1144 IGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHIT 965
I RS + IN + PEAK LKSW+DSEGK+ S++ I + + + G +S+Y+DRV LS IT
Sbjct: 70 ISRSNVVINRESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSQIT 249
Query: 964 SDPAMGQEKPVFFSL 920
S+P++ +EKPVF +L
Sbjct: 250 SNPSLFEEKPVFLAL 294
Score = 47.8 bits (98), Expect(3) = 3e-032
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / +2
Query: 1213 DSSPVVAIKSLKVSDFQGVSLST 1145
D SPV+AIKSLKV DFQGVSLST
Sbjct: 2 DQSPVIAIKSLKVGDFQGVSLST 70
Score = 37.3 bits (75), Expect(3) = 3e-032
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -3 / +2
Query: 911 HKPHQA*SEYVVPCLHDL*QEGD*SFWVWILVRGVP 804
HK HQ VVP L DL*QE D S +W+LV +P
Sbjct: 302 HKLHQTRPNNVVPSL*DL*QESDRST*LWLLV*RMP 409
>gb|CW798485.1|CW798485 WiscDsLox412D12 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 600
Score = 91.3 bits (193), Expect(2) = 4e-032
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 646 DSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+ Y KLKEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++ LL++I+
Sbjct: 352 NEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 185
Score = 70.7 bits (148), Expect(2) = 4e-032
Identities = 24/41 (58%), Positives = 35/41 (85%)
Frame = -1 / -1
Query: 778 RYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 656
RYIM +K++D +GE W+S FN+ AEKI+GCSADEL++++ E
Sbjct: 576 RYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSE 454
>gb|BP588128.1|BP588128 BP588128 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-45-D07 3',
mRNA sequence
Length = 427
Score = 86.8 bits (183), Expect(2) = 7e-032
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = -1 / -1
Query: 631 KLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
K KEATW H+FRVSVTQ+EY EKRQR+TV+G AP+DFAAE++ LL++I+
Sbjct: 280 KTKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 128
Score = 74.4 bits (156), Expect(2) = 7e-032
Identities = 25/43 (58%), Positives = 37/43 (86%)
Frame = -1 / -2
Query: 775 YIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGD 647
YIM +K++D +GE W+S FN+ AEKI+GCSADEL++++ EEG+
Sbjct: 426 YIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSEEGE 298
>gb|BH854836.1|BH854836 SALK_088429.44.85.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_088429.44.85.x,
DNA sequence
Length = 434
Score = 138 bits (297), Expect = 3e-031
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -1 / -1
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVD 1211
D++GVVQSVSPT+S+RRK DNE IPKRDI +AD++ KTV +SLWNDLAT GQELLDM D
Sbjct: 281 DVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMAD 102
Query: 1210 SSPVVAIKSLKVSDFQGVSL 1151
+ PV+AIKSLKV FQG S+
Sbjct: 101 NHPVIAIKSLKVGAFQGKSI 42
>emb|AL021687.1|ATT18B16 Arabidopsis thaliana DNA chromosome 4, BAC clone T18B16 (ESSA project)
Length = 96574
Score = 66.6 bits (139), Expect(5) = 2e-030
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -1 / -2
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+K+ ++S+F G ++STIG S L I+PD EA+ LK+W++ EGK +S E
Sbjct: 35319 PVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISLSRE 35149
Score = 65.7 bits (137), Expect(5) = 2e-030
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = -1 / -2
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
C+KKVT+ + CE C K+ EC RYI+ +++ D T V+ F E E+I+G SA
Sbjct: 34977 CSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAK 34798
Query: 679 ELDRIRKEEGDD 644
+L ++ E D+
Sbjct: 34797 DLYYVKNEHKDE 34762
Score = 40.5 bits (82), Expect(5) = 2e-030
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1 / -2
Query: 1318 PKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
PKR + + D SG++V +++W D GQ L + DS
Sbjct: 35439 PKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDS 35329
Score = 37.7 bits (76), Expect(5) = 2e-030
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGE 1469
+S+GSLR A K F ++NDYE+ L+ + +++ E
Sbjct: 35694 ISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEE 35587
Score = 34.1 bits (68), Expect(5) = 2e-030
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = -1 / -2
Query: 1396 LVDIVGVVQSVSPTLSVRRK 1337
+VD++G+V S+SPT+++ RK
Sbjct: 35514 IVDVIGIVSSISPTVTITRK 35455
>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50
Length = 199382
Score = 66.6 bits (139), Expect(5) = 3e-029
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -1 / -1
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+K+ ++S+F G ++STIG S L I+PD EA+ LK+W++ EGK +S E
Sbjct: 51758 PVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISLSRE 51588
Score = 65.7 bits (137), Expect(5) = 3e-029
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = -1 / -1
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
C+KKVT+ + CE C K+ EC RYI+ +++ D T V+ F E E+I+G SA
Sbjct: 51416 CSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAK 51237
Query: 679 ELDRIRKEEGDD 644
+L ++ E D+
Sbjct: 51236 DLYYVKNEHKDE 51201
Score = 40.5 bits (82), Expect(5) = 3e-029
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1 / -1
Query: 1318 PKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
PKR + + D SG++V +++W D GQ L + DS
Sbjct: 51878 PKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDS 51768
Score = 37.7 bits (76), Expect(5) = 3e-029
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1 / -1
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGE 1469
+S+GSLR A K F ++NDYE+ L+ + +++ E
Sbjct: 52133 ISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEE 52026
Score = 34.1 bits (68), Expect(5) = 3e-029
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = -1 / -1
Query: 1396 LVDIVGVVQSVSPTLSVRRK 1337
+VD++G+V S+SPT+++ RK
Sbjct: 51953 IVDVIGIVSSISPTVTITRK 51894
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 66.6 bits (139), Expect(4) = 6e-027
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -1 / -3
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+K+ ++S+F G ++STIG S L I+PD EA+ LK+W++ EGK +S E
Sbjct: 6380450 PVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISLSRE 6380280
Score = 40.5 bits (82), Expect(4) = 6e-027
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1 / -3
Query: 1318 PKRDIVVADDSGKTVTISLWNDLATTTGQELLDMVDS 1208
PKR + + D SG++V +++W D GQ L + DS
Sbjct: 6380570 PKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDS 6380460
Score = 37.7 bits (76), Expect(4) = 6e-027
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 1576 VSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGE 1469
+S+GSLR A K F ++NDYE+ L+ + +++ E
Sbjct: 6380825 ISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEE 6380718
Score = 34.1 bits (68), Expect(4) = 6e-027
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = -1 / -3
Query: 1396 LVDIVGVVQSVSPTLSVRRK 1337
+VD++G+V S+SPT+++ RK
Sbjct: 6380645 IVDVIGIVSSISPTVTITRK 6380586
>ref|NM_123908.1| Arabidopsis thaliana DNA binding / nucleic acid binding AT5G45400
mRNA, complete cds
Length = 2562
Score = 68.0 bits (142), Expect(3) = 2e-025
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = -1 / +1
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
C+KKVT + CE C K EC RYI+ I+L D T W + F E E+I+G SA
Sbjct: 1831 CSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEAGEEIMGMSAK 2010
Query: 679 ELDRIRKEEGDD 644
+L ++ E D+
Sbjct: 2011 DLYYVKYENQDE 2046
Score = 67.0 bits (140), Expect(3) = 2e-025
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = -1 / +1
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+K+ ++ +F G +STIG S I PD PEA+ L+ WY+ EG++ IS E
Sbjct: 1489 PVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYEREGRNAHFTSISRE 1659
Score = 31.3 bits (62), Expect(3) = 2e-025
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 1390 DIVGVVQSVSPTLSVRRK 1337
D++G+V S+SPT+++ RK
Sbjct: 1300 DVIGIVSSISPTVAIMRK 1353
>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19
Length = 85020
Score = 68.0 bits (142), Expect(3) = 2e-022
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = -1 / +3
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSAD 680
C+KKVT + CE C K EC RYI+ I+L D T W + F E E+I+G SA
Sbjct: 20319 CSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEAGEEIMGMSAK 20498
Query: 679 ELDRIRKEEGDD 644
+L ++ E D+
Sbjct: 20499 DLYYVKYENQDE 20534
Score = 67.0 bits (140), Expect(3) = 2e-022
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = -1 / +3
Query: 1204 PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
PV+A+K+ ++ +F G +STIG S I PD PEA+ L+ WY+ EG++ IS E
Sbjct: 19977 PVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYEREGRNAHFTSISRE 20147
Score = 31.3 bits (62), Expect(3) = 2e-022
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = -1 / +3
Query: 1390 DIVGVVQSVSPTLSVRRK 1337
D++G+V S+SPT+++ RK
Sbjct: 19788 DVIGIVSSISPTVAIMRK 19841
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,205,920,275
Number of Sequences: 1013581
Number of extensions: 46779867
Number of successful extensions: 197271
Number of sequences better than 1.0e-020: 38
length of database: 302,980,290
effective HSP length: 58
effective length of database: 244,192,592
effective search space used: 115991481200
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)