TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405110.2.1
(945 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY065303.1| Arabidopsis thaliana putative ubiquitin-conj... 140 5e-062
ref|NM_124465.4| Arabidopsis thaliana ubiquitin conjugating... 140 5e-062
emb|BX834060.1|CNS09YYK Arabidopsis thaliana Full-length cD... 140 5e-062
gb|AY096429.1| Arabidopsis thaliana putative ubiquitin-conj... 140 5e-062
gb|DQ027040.1| Arabidopsis thaliana ubiquitinating enzyme (... 140 5e-062
gb|AV828955.1|AV828955 AV828955 RAFL9 Arabidopsis thaliana ... 140 9e-051
dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosom... 63 6e-035
gb|Z25704.1|Z25704 ATTS1169 Versailles-VC Arabidopsis thali... 102 9e-035
gb|BP852926.1|BP852926 BP852926 RAFL21 Arabidopsis thaliana... 119 2e-025
gb|AV557811.1|AV557811 AV557811 Arabidopsis thaliana green ... 67 2e-023
gb|BP564044.1|BP564044 BP564044 RAFL14 Arabidopsis thaliana... 67 4e-023
gb|AV788864.1|AV788864 AV788864 RAFL6 Arabidopsis thaliana ... 67 4e-023
gb|AV803578.1|AV803578 AV803578 RAFL9 Arabidopsis thaliana ... 67 4e-023
gb|AV811599.1|AV811599 AV811599 RAFL9 Arabidopsis thaliana ... 67 4e-023
gb|AV531022.1|AV531022 AV531022 Arabidopsis thaliana flower... 79 9e-023
dbj|AK117378.1| Arabidopsis thaliana At5g41080 mRNA for unk... 79 1e-022
ref|NM_180784.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJU... 79 1e-022
ref|NM_180783.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJU... 79 1e-022
gb|AF370257.1| Arabidopsis thaliana putative E2, ubiquitin-... 79 1e-022
ref|NM_123535.2| Arabidopsis thaliana UBC8 (UBIQUITIN CONJU... 79 1e-022
gb|CF652849.1|CF652849 80-L020524-066-003-O20-SP6P MPIZ-ADI... 79 1e-022
gb|AY054595.1| Arabidopsis thaliana ubiquitin-conjugating e... 79 1e-022
gb|AY085670.1| Arabidopsis thaliana clone 16865 mRNA, compl... 79 1e-022
gb|BE038030.1|BE038030 AA08A03 AA Arabidopsis thaliana cDNA... 79 1e-022
gb|AF325009.2|AF325009 Arabidopsis thaliana AT5g41700 (AT5g... 79 1e-022
gb|AV821831.1|AV821831 AV821831 RAFL4 Arabidopsis thaliana ... 79 1e-022
gb|AY057631.1| Arabidopsis thaliana AT5g41700/MBK23_24 mRNA... 79 1e-022
emb|BX832305.1|CNS0A1WR Arabidopsis thaliana Full-length cD... 79 1e-022
gb|CB258369.1|CB258369 32-E011081-014-003-O08-T7R MPIZ-ADIS... 79 1e-022
gb|CB256359.1|CB256359 81-E011641-027-006-A21-T7R MPIZ-ADIS... 80 1e-022
gb|BP562982.2|BP562982 BP562982 RAFL16 Arabidopsis thaliana... 79 1e-022
gb|AV561423.1|AV561423 AV561423 Arabidopsis thaliana green ... 79 1e-022
gb|AV536922.1|AV536922 AV536922 Arabidopsis thaliana liquid... 79 1e-022
gb|AV553432.1|AV553432 AV553432 Arabidopsis thaliana roots ... 79 1e-022
gb|AY072514.1| Arabidopsis thaliana ubiquitin-conjugating e... 79 1e-022
gb|AY063074.1| Arabidopsis thaliana putative ubiquitin-conj... 79 1e-022
emb|CQ805486.1| Sequence 1897 from Patent WO2004035798 79 1e-022
gb|DQ027022.1| Arabidopsis thaliana ubiquitinating enzyme (... 79 1e-022
gb|AF325019.2|AF325019 Arabidopsis thaliana AT4g27960 (AT4g... 80 3e-022
ref|NM_118934.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJU... 80 3e-022
ref|NM_001036151.1| Arabidopsis thaliana ubiquitin conjugat... 79 3e-022
ref|NM_105097.3| Arabidopsis thaliana ubiquitin conjugating... 79 3e-022
emb|BX816699.1|CNS0ABXP Arabidopsis thaliana Full-length cD... 79 3e-022
emb|BX815683.1|CNS0ABHQ Arabidopsis thaliana Full-length cD... 79 3e-022
gb|AF385718.1|AF385718 Arabidopsis thaliana At1g64230/F22C1... 79 3e-022
gb|AF480945.1| Arabidopsis thaliana ubiquitin conjugating e... 79 3e-022
gb|BE038411.1|BE038411 AA17B06 AA Arabidopsis thaliana cDNA... 79 3e-022
emb|Z14990.1|ATUBC9 A.thaliana UBC9 mRNA for ubiquitin conj... 80 3e-022
ref|NM_179131.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJU... 80 3e-022
gb|CF651565.1|CF651565 13-L020361-066-002-J03-SP6P MPIZ-ADI... 80 3e-022
gb|AV822315.1|AV822315 AV822315 RAFL5 Arabidopsis thaliana ... 79 3e-022
gb|L00639.1|ATHUBCB Arabidopsis thaliana ubiquitin conjugat... 80 3e-022
emb|X72626.1|ATUCEE2B A.thaliana UbcAT4b mRNA for ubiquitin... 80 3e-022
gb|BP796808.1|BP796808 BP796808 RAFL6 Arabidopsis thaliana ... 79 3e-022
gb|CF653110.1|CF653110 96-L020361-066-002-P23-SP6P MPIZ-ADI... 80 3e-022
gb|AV545278.1|AV545278 AV545278 Arabidopsis thaliana roots ... 79 3e-022
gb|CB253650.1|CB253650 92-E012994-019-004-H23-SP6r MPIZ-ADI... 79 3e-022
gb|CB261481.1|CB261481 25-E9517-012-003-A04-T7R MPIZ-ADIS-0... 79 3e-022
gb|AV534450.1|AV534450 AV534450 Arabidopsis thaliana flower... 80 3e-022
gb|AV783038.1|AV783038 AV783038 RAFL5 Arabidopsis thaliana ... 79 3e-022
gb|AV534460.1|AV534460 AV534460 Arabidopsis thaliana flower... 79 3e-022
gb|DQ027023.1| Arabidopsis thaliana ubiquitinating enzyme (... 80 3e-022
gb|CD531317.1|CD531317 10F10 Arabidopsis Leaf Senescence Li... 79 3e-022
gb|AY142644.1| Arabidopsis thaliana E2 ubiquitin-conjugatin... 80 3e-022
emb|AX505798.1| Sequence 493 from Patent WO0216655 80 3e-022
gb|AY133670.1| Arabidopsis thaliana At1g64230/F22C12_17 mRN... 79 3e-022
gb|DQ027041.1| Arabidopsis thaliana ubiquitinating enzyme (... 79 3e-022
gb|CF652773.1|CF652773 75-L020579-066-004-F19-SP6P MPIZ-ADI... 78 8e-022
gb|AY063869.1| Arabidopsis thaliana putative E2, ubiquitin-... 78 8e-022
ref|NM_111703.2| Arabidopsis thaliana ubiquitin conjugating... 78 8e-022
gb|AY086109.1| Arabidopsis thaliana clone 21455 mRNA, compl... 78 8e-022
gb|AV824972.1|AV824972 AV824972 RAFL6 Arabidopsis thaliana ... 78 8e-022
gb|AU236143.1|AU236143 AU236143 RAFL14 Arabidopsis thaliana... 78 8e-022
gb|L00641.1|ATHUBCD Arabidopsis thaliana ubiquitin conjugat... 78 8e-022
emb|Z14992.1|ATUBC11 A.thaliana UBC11 mRNA for ubiquitin co... 78 8e-022
gb|AY091223.1| Arabidopsis thaliana putative ubiquitin conj... 78 8e-022
emb|AX506312.1| Sequence 1007 from Patent WO0216655 78 8e-022
gb|DQ027025.1| Arabidopsis thaliana ubiquitinating enzyme (... 78 8e-022
gb|BP861731.1|BP861731 BP861731 RAFL21 Arabidopsis thaliana... 89 1e-021
gb|BE037619.1|BE037619 AA01H08 AA Arabidopsis thaliana cDNA... 78 1e-021
ref|NM_180850.1| Arabidopsis thaliana UBC10; ubiquitin conj... 78 1e-021
ref|NM_124709.2| Arabidopsis thaliana UBC10; ubiquitin conj... 78 1e-021
gb|AY063872.1| Arabidopsis thaliana putative E2, ubiquitin-... 79 1e-021
gb|L00640.1|ATHUBCC Arabidopsis thaliana ubiquitin conjugat... 78 1e-021
emb|Z14991.1|ATUBC10 A.thaliana UBC10 mRNA for ubiquitin co... 78 1e-021
ref|NM_127226.2| Arabidopsis thaliana ubiquitin conjugating... 79 1e-021
gb|CF651247.1|CF651247 55-E021110-013-001-M13-T7R MPIZ-ADIS... 78 1e-021
gb|AF326872.1| Arabidopsis thaliana putative E2, ubiquitin-... 78 1e-021
emb|BX833981.1|CNS0A0DI Arabidopsis thaliana Full-length cD... 78 1e-021
gb|CK121214.1|CK121214 204b02.p1 AtM1 Arabidopsis thaliana ... 78 1e-021
gb|CF652449.1|CF652449 56-L020360-066-002-O14-SP6P MPIZ-ADI... 78 1e-021
gb|AY065059.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA... 78 1e-021
gb|AF324718.2|AF324718 Arabidopsis thaliana AT5g53300 (AT5g... 78 1e-021
gb|AY086447.1| Arabidopsis thaliana clone 25162 mRNA, compl... 78 1e-021
gb|CB255064.1|CB255064 51-E015393-019-006-F13-T7R MPIZ-ADIS... 78 1e-021
gb|AF325005.2|AF325005 Arabidopsis thaliana AT5g53300 (AT5g... 78 1e-021
gb|CB255683.1|CB255683 26-E012737-027-002-C23-T7R MPIZ-ADIS... 78 1e-021
gb|BE038449.1|BE038449 AA17F08 AA Arabidopsis thaliana cDNA... 78 1e-021
gb|AY039566.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA... 78 1e-021
gb|BE038354.1|BE038354 AA12D11 AA Arabidopsis thaliana cDNA... 78 1e-021
gb|AV821108.1|AV821108 AV821108 RAFL2 Arabidopsis thaliana ... 78 1e-021
gb|BE038713.1|BE038713 AB04E02 AB Arabidopsis thaliana cDNA... 78 1e-021
gb|BE038167.1|BE038167 AA09G07 AA Arabidopsis thaliana cDNA... 78 1e-021
gb|BE038178.1|BE038178 AA09H11 AA Arabidopsis thaliana cDNA... 78 1e-021
gb|BE038097.1|BE038097 AA08G12 AA Arabidopsis thaliana cDNA... 78 1e-021
gb|CB257260.1|CB257260 37-E012737-027-002-I09-T7R MPIZ-ADIS... 78 1e-021
gb|CB254341.1|CB254341 72-E015330-019-005-O17-T7R MPIZ-ADIS... 78 1e-021
gb|CB256271.1|CB256271 84-E012743-027-007-H21-T7R MPIZ-ADIS... 78 1e-021
gb|AY086787.1| Arabidopsis thaliana clone 27679 mRNA, compl... 79 1e-021
gb|CA781569.1|CA781569 024E12AF Infected Arabidopsis Leaf A... 78 1e-021
gb|CB264848.1|CB264848 29-E014994-035-003-I08-T7R MPIZ-ADIS... 78 1e-021
gb|AV536386.1|AV536386 AV536386 Arabidopsis thaliana liquid... 78 1e-021
gb|AV537520.1|AV537520 AV537520 Arabidopsis thaliana roots ... 78 1e-021
gb|CB253653.1|CB253653 92-E012999-019-004-H23-T7R MPIZ-ADIS... 77 1e-021
gb|AV535203.1|AV535203 AV535203 Arabidopsis thaliana flower... 78 1e-021
gb|CB253608.1|CB253608 93-E018440-019-009-J24-T7R MPIZ-ADIS... 78 1e-021
gb|CK118958.1|CK118958 215e11.p1 AtM1 Arabidopsis thaliana ... 78 1e-021
gb|CB253047.1|CB253047 11-E012999-019-004-F03-T7R MPIZ-ADIS... 78 1e-021
gb|AV537202.1|AV537202 AV537202 Arabidopsis thaliana liquid... 78 1e-021
gb|AV781567.1|AV781567 AV781567 RAFL2 Arabidopsis thaliana ... 78 1e-021
gb|AV539799.1|AV539799 AV539799 Arabidopsis thaliana roots ... 78 1e-021
gb|CB253043.1|CB253043 11-E012994-019-004-F03-SP6r MPIZ-ADI... 78 1e-021
gb|CD530512.1|CD530512 06K06 Arabidopsis Leaf Senescence Li... 78 1e-021
gb|CB258273.1|CB258273 38-E011802-014-004-K10-T7R MPIZ-ADIS... 78 1e-021
gb|CB261270.1|CB261270 13-E9571-012-004-I04-T7R MPIZ-ADIS-0... 78 1e-021
gb|AV549452.1|AV549452 AV549452 Arabidopsis thaliana roots ... 78 1e-021
gb|AY091232.1| Arabidopsis thaliana putative ubiquitin-conj... 79 1e-021
gb|AY113937.1| Arabidopsis thaliana putative E2, ubiquitin-... 78 1e-021
gb|DQ027042.1| Arabidopsis thaliana ubiquitinating enzyme (... 79 1e-021
gb|AY129488.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA... 78 1e-021
gb|DQ027024.1| Arabidopsis thaliana ubiquitinating enzyme (... 78 1e-021
gb|AV801056.1|AV801056 AV801056 RAFL9 Arabidopsis thaliana ... 78 1e-021
emb|BX815644.1|CNS0ABEX Arabidopsis thaliana Full-length cD... 77 2e-021
emb|BX819773.1|CNS0AA6R Arabidopsis thaliana Full-length cD... 79 2e-021
gb|Z17692.1|Z17692 ATTS0266 Gif-SeedA+B Arabidopsis thalian... 75 2e-021
gb|AV537507.1|AV537507 AV537507 Arabidopsis thaliana roots ... 77 3e-021
ref|NM_180785.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJU... 79 3e-021
gb|AV782161.1|AV782161 AV782161 RAFL4 Arabidopsis thaliana ... 76 5e-021
gb|AY080741.1| Arabidopsis thaliana putative E2, ubiquitin-... 76 5e-021
gb|AV821644.1|AV821644 AV821644 RAFL4 Arabidopsis thaliana ... 76 5e-021
gb|AV825064.1|AV825064 AV825064 RAFL6 Arabidopsis thaliana ... 79 5e-021
gb|AI997016.1|AI997016 701551685 A. thaliana, Columbia Col-... 62 5e-021
gb|AV441235.1|AV441235 AV441235 Arabidopsis thaliana above-... 73 7e-021
gb|CB256356.1|CB256356 81-E011580-027-006-A21-T7R MPIZ-ADIS... 80 7e-021
gb|BP819504.1|BP819504 BP819504 RAFL19 Arabidopsis thaliana... 79 7e-021
gb|CB264098.1|CB264098 90-E014661-035-002-D24-T7R MPIZ-ADIS... 78 9e-021
>gb|AY065303.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
(At5g50870) mRNA, complete cds
Length = 811
Score = 140 bits (301), Expect(4) = 5e-062
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -1 / +1
Query: 765 NISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLD 586
N++ LTGTI GP +PYEGGTF IDI +P GYPFEPPKMQF TKVWHPNISSQ+GAICLD
Sbjct: 169 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 348
Query: 585 ILKDQW 568
ILKDQW
Sbjct: 349 ILKDQW 366
Score = 119 bits (254), Expect(3) = 6e-039
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +2 / -3
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VF+VRAGLH SF++SK IAP WLL+ GC TLV NCIFGGS GYP G IS+ NVPPS*G+
Sbjct: 389 VFRVRAGLHWSFKISKHIAPLWLLIFGCQTLVENCIFGGSNGYPSGIVISI*NVPPS*GV 210
Query: 725 SAGPAMVPV 751
GP MVPV
Sbjct: 209 PIGPGMVPV 183
Score = 66.6 bits (139), Expect(4) = 5e-062
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / +1
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 532 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 651
Score = 64.3 bits (134), Expect(4) = 5e-062
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / +1
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 436 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 537
Score = 53.3 bits (110), Expect(3) = 6e-039
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2 / -3
Query: 278 EQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCTFSS 388
EQSFSRA FSSP ALLT*+S KPISTS TFSS
Sbjct: 650 EQSFSRARFSSPPLDSIALLT*ASPKPISTSLLTFSS 540
Score = 29.5 bits (58), Expect(3) = 6e-039
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +2 / -3
Query: 410 AKASVQ*RAVAANVG*SRRYCWATT 484
AK SVQ*RAV N * YC ATT
Sbjct: 524 AKVSVQ*RAVDTNT**FFMYCSATT 450
Score = 26.3 bits (51), Expect(4) = 5e-062
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 837 QKELTECNRDREVSGVSI 784
QKEL +C R+++ SG+ +
Sbjct: 100 QKELQDCERNQDSSGIRV 153
>ref|NM_124465.4| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT5G50870 mRNA, complete cds
Length = 800
Score = 140 bits (301), Expect(4) = 5e-062
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -1 / +1
Query: 765 NISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLD 586
N++ LTGTI GP +PYEGGTF IDI +P GYPFEPPKMQF TKVWHPNISSQ+GAICLD
Sbjct: 169 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 348
Query: 585 ILKDQW 568
ILKDQW
Sbjct: 349 ILKDQW 366
Score = 119 bits (254), Expect(3) = 6e-039
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +2 / -1
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VF+VRAGLH SF++SK IAP WLL+ GC TLV NCIFGGS GYP G IS+ NVPPS*G+
Sbjct: 389 VFRVRAGLHWSFKISKHIAPLWLLIFGCQTLVENCIFGGSNGYPSGIVISI*NVPPS*GV 210
Query: 725 SAGPAMVPV 751
GP MVPV
Sbjct: 209 PIGPGMVPV 183
Score = 66.6 bits (139), Expect(4) = 5e-062
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / +1
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 532 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 651
Score = 64.3 bits (134), Expect(4) = 5e-062
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / +1
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 436 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 537
Score = 53.3 bits (110), Expect(3) = 6e-039
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2 / -1
Query: 278 EQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCTFSS 388
EQSFSRA FSSP ALLT*+S KPISTS TFSS
Sbjct: 650 EQSFSRARFSSPPLDSIALLT*ASPKPISTSLLTFSS 540
Score = 29.5 bits (58), Expect(3) = 6e-039
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +2 / -1
Query: 410 AKASVQ*RAVAANVG*SRRYCWATT 484
AK SVQ*RAV N * YC ATT
Sbjct: 524 AKVSVQ*RAVDTNT**FFMYCSATT 450
Score = 26.3 bits (51), Expect(4) = 5e-062
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 837 QKELTECNRDREVSGVSI 784
QKEL +C R+++ SG+ +
Sbjct: 100 QKELQDCERNQDSSGIRV 153
>emb|BX834060.1|CNS09YYK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL92ZH05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 791
Score = 140 bits (301), Expect(4) = 5e-062
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -1 / +1
Query: 765 NISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLD 586
N++ LTGTI GP +PYEGGTF IDI +P GYPFEPPKMQF TKVWHPNISSQ+GAICLD
Sbjct: 160 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 339
Query: 585 ILKDQW 568
ILKDQW
Sbjct: 340 ILKDQW 357
Score = 119 bits (254), Expect(3) = 6e-039
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +2 / -1
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VF+VRAGLH SF++SK IAP WLL+ GC TLV NCIFGGS GYP G IS+ NVPPS*G+
Sbjct: 380 VFRVRAGLHWSFKISKHIAPLWLLIFGCQTLVENCIFGGSNGYPSGIVISI*NVPPS*GV 201
Query: 725 SAGPAMVPV 751
GP MVPV
Sbjct: 200 PIGPGMVPV 174
Score = 66.6 bits (139), Expect(4) = 5e-062
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / +1
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 523 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 642
Score = 64.3 bits (134), Expect(4) = 5e-062
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / +1
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 427 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 528
Score = 53.3 bits (110), Expect(3) = 6e-039
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2 / -1
Query: 278 EQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCTFSS 388
EQSFSRA FSSP ALLT*+S KPISTS TFSS
Sbjct: 641 EQSFSRARFSSPPLDSIALLT*ASPKPISTSLLTFSS 531
Score = 29.5 bits (58), Expect(3) = 6e-039
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +2 / -1
Query: 410 AKASVQ*RAVAANVG*SRRYCWATT 484
AK SVQ*RAV N * YC ATT
Sbjct: 515 AKVSVQ*RAVDTNT**FFMYCSATT 441
Score = 26.3 bits (51), Expect(4) = 5e-062
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 837 QKELTECNRDREVSGVSI 784
QKEL +C R+++ SG+ +
Sbjct: 91 QKELQDCERNQDSSGIRV 144
>gb|AY096429.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme protein
(At5g50870) mRNA, complete cds
Length = 610
Score = 140 bits (301), Expect(4) = 5e-062
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -1 / +1
Query: 765 NISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLD 586
N++ LTGTI GP +PYEGGTF IDI +P GYPFEPPKMQF TKVWHPNISSQ+GAICLD
Sbjct: 91 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 270
Query: 585 ILKDQW 568
ILKDQW
Sbjct: 271 ILKDQW 288
Score = 119 bits (254), Expect(3) = 6e-039
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +2 / -3
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VF+VRAGLH SF++SK IAP WLL+ GC TLV NCIFGGS GYP G IS+ NVPPS*G+
Sbjct: 311 VFRVRAGLHWSFKISKHIAPLWLLIFGCQTLVENCIFGGSNGYPSGIVISI*NVPPS*GV 132
Query: 725 SAGPAMVPV 751
GP MVPV
Sbjct: 131 PIGPGMVPV 105
Score = 66.6 bits (139), Expect(4) = 5e-062
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / +1
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 454 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 573
Score = 64.3 bits (134), Expect(4) = 5e-062
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / +1
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 358 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 459
Score = 53.3 bits (110), Expect(3) = 6e-039
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2 / -3
Query: 278 EQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCTFSS 388
EQSFSRA FSSP ALLT*+S KPISTS TFSS
Sbjct: 572 EQSFSRARFSSPPLDSIALLT*ASPKPISTSLLTFSS 462
Score = 29.5 bits (58), Expect(3) = 6e-039
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +2 / -3
Query: 410 AKASVQ*RAVAANVG*SRRYCWATT 484
AK SVQ*RAV N * YC ATT
Sbjct: 446 AKVSVQ*RAVDTNT**FFMYCSATT 372
Score = 26.3 bits (51), Expect(4) = 5e-062
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 837 QKELTECNRDREVSGVSI 784
QKEL +C R+++ SG+ +
Sbjct: 22 QKELQDCERNQDSSGIRV 75
>gb|DQ027040.1| Arabidopsis thaliana ubiquitinating enzyme (At5g50870) mRNA,
complete cds
Length = 579
Score = 140 bits (301), Expect(4) = 5e-062
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -1 / +1
Query: 765 NISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLD 586
N++ LTGTI GP +PYEGGTF IDI +P GYPFEPPKMQF TKVWHPNISSQ+GAICLD
Sbjct: 91 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 270
Query: 585 ILKDQW 568
ILKDQW
Sbjct: 271 ILKDQW 288
Score = 119 bits (254), Expect(3) = 6e-039
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +2 / -2
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VF+VRAGLH SF++SK IAP WLL+ GC TLV NCIFGGS GYP G IS+ NVPPS*G+
Sbjct: 311 VFRVRAGLHWSFKISKHIAPLWLLIFGCQTLVENCIFGGSNGYPSGIVISI*NVPPS*GV 132
Query: 725 SAGPAMVPV 751
GP MVPV
Sbjct: 131 PIGPGMVPV 105
Score = 66.6 bits (139), Expect(4) = 5e-062
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / +1
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 454 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 573
Score = 64.3 bits (134), Expect(4) = 5e-062
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / +1
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 358 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 459
Score = 53.3 bits (110), Expect(3) = 6e-039
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2 / -2
Query: 278 EQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCTFSS 388
EQSFSRA FSSP ALLT*+S KPISTS TFSS
Sbjct: 572 EQSFSRARFSSPPLDSIALLT*ASPKPISTSLLTFSS 462
Score = 29.5 bits (58), Expect(3) = 6e-039
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +2 / -2
Query: 410 AKASVQ*RAVAANVG*SRRYCWATT 484
AK SVQ*RAV N * YC ATT
Sbjct: 446 AKVSVQ*RAVDTNT**FFMYCSATT 372
Score = 26.3 bits (51), Expect(4) = 5e-062
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 837 QKELTECNRDREVSGVSI 784
QKEL +C R+++ SG+ +
Sbjct: 22 QKELQDCERNQDSSGIRV 75
>gb|AV828955.1|AV828955 AV828955 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-36-A02 5',
mRNA sequence
Length = 592
Score = 140 bits (301), Expect(4) = 9e-051
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -1 / +2
Query: 765 NISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLD 586
N++ LTGTI GP +PYEGGTF IDI +P GYPFEPPKMQF TKVWHPNISSQ+GAICLD
Sbjct: 170 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 349
Query: 585 ILKDQW 568
ILKDQW
Sbjct: 350 ILKDQW 367
Score = 119 bits (254), Expect(2) = 2e-028
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +2 / -2
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VF+VRAGLH SF++SK IAP WLL+ GC TLV NCIFGGS GYP G IS+ NVPPS*G+
Sbjct: 390 VFRVRAGLHWSFKISKHIAPLWLLIFGCQTLVENCIFGGSNGYPSGIVISI*NVPPS*GV 211
Query: 725 SAGPAMVPV 751
GP MVPV
Sbjct: 210 PIGPGMVPV 184
Score = 64.3 bits (134), Expect(4) = 9e-051
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / +2
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 437 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 538
Score = 29.5 bits (58), Expect(2) = 2e-028
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +2 / -2
Query: 398 DALFAKASVQ*RAVAANVG*SRRYCWATT 484
+ AK SVQ*RAV N * YC ATT
Sbjct: 537 EDFLAKVSVQ*RAVDTNT**FFMYCSATT 451
Score = 28.6 bits (56), Expect(4) = 9e-051
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1 / +2
Query: 396 TGMEEKVQKLVEMGFPEDQV 337
+ +EEKV++LVE GF + QV
Sbjct: 533 SSLEEKVKRLVEXGFGDAQV 592
Score = 26.3 bits (51), Expect(4) = 9e-051
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 837 QKELTECNRDREVSGVSI 784
QKEL +C R+++ SG+ +
Sbjct: 101 QKELQDCERNQDSSGIRV 154
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7
Length = 68726
Score = 63.4 bits (132), Expect(4) = 7e-022
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / +2
Query: 469 LLGNNSILRIIRCRRRKQSLKGKESSLQGKGWAPLIFQNVQANCSILAADVRVP 630
L NSILR+ R R+ SL +S LQ K W PL+FQ++QA C+ LA ++R+P
Sbjct: 2492 LFSYNSILRVFGLRCRE*SLN*NKSCLQSKSWTPLVFQDIQAYCTALATNIRMP 2653
Score = 58.8 bits (122), Expect(5) = 6e-035
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = -1 / -1
Query: 381 KVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+V++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 2225 QVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 2121
Score = 54.2 bits (112), Expect(5) = 6e-035
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -1 / -2
Query: 765 NISHLTGTIAGPADSPYEGGTFVIDIRLPG 676
N++ LTGTI GP +PYEGGTF IDI +PG
Sbjct: 3397 NLTRLTGTIPGPIGTPYEGGTFQIDITMPG 3308
Score = 51.9 bits (107), Expect(5) = 6e-035
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -1 / -2
Query: 627 HPNISSQNGAICLDILKDQW 568
HPNISSQ+GAICLDILKDQW
Sbjct: 2650 HPNISSQSGAICLDILKDQW 2591
Score = 46.9 bits (96), Expect(4) = 7e-022
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2 / +1
Query: 278 EQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCT 379
EQSFSRA FSSP ALLT*+S KPISTS T
Sbjct: 2122 EQSFSRARFSSPPLDSIALLT*ASPKPISTSLLT 2223
Score = 45.1 bits (92), Expect(5) = 6e-035
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -1 / -1
Query: 471 QYLRDYPTFAATARYWTEAFAKSAS 397
QY+++Y F +TARYWTE FAK +S
Sbjct: 2402 QYMKNYQVFVSTARYWTETFAKKSS 2328
Score = 43.7 bits (89), Expect(5) = 6e-035
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / -1
Query: 675 GYPFEPPKMQFITKVW 628
GYPFEPPKMQF TKVW
Sbjct: 3071 GYPFEPPKMQFSTKVW 3024
Score = 39.1 bits (79), Expect(4) = 7e-022
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 677 PGRRISMTNVPPS*GLSAGPAMVPV 751
PG IS+ NVPPS*G+ GP MVPV
Sbjct: 3309 PGIVISI*NVPPS*GVPIGPGMVPV 3383
Score = 35.9 bits (72), Expect(4) = 7e-022
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 632 TLVMNCIFGGSKGYP 676
TLV NCIFGGS GYP
Sbjct: 3028 TLVENCIFGGSNGYP 3072
>gb|Z25704.1|Z25704 ATTS1169 Versailles-VC Arabidopsis thaliana cDNA clone VCVDA09 3'
similar to Ubiquitin conjugating enzyme E2, mRNA
sequence
Length = 398
Score = 102 bits (217), Expect(2) = 9e-035
Identities = 43/76 (56%), Positives = 50/76 (65%)
Frame = -1 / +1
Query: 624 PNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVAQQYLRDYPTF 445
PNISSQ+GAICLDILKDQW P DPQDAVVA+QY+++Y F
Sbjct: 1 PNISSQSGAICLDILKDQWSXALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVF 180
Query: 444 AATARYWTEAFAKSAS 397
+TARYWTE FAK +S
Sbjct: 181 VSTARYWTETFAKKSS 228
Score = 67.5 bits (141), Expect(2) = 9e-035
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = -1 / +1
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCSGSG 268
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS G
Sbjct: 223 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCSA*G 351
>gb|BP852926.1|BP852926 BP852926 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-21-I17 5',
mRNA sequence
Length = 384
Score = 119 bits (254), Expect = 2e-025
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = -1 / +1
Query: 765 NISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLD 586
N++ LTGTI GP +PYEGGTF IDI +P GYP EPPKMQF TKV HPNISSQ GAIC D
Sbjct: 178 NLTRLTGTIPGPMGTPYEGGTFQIDITMPDGYPLEPPKMQFSTKVGHPNISSQRGAICWD 357
Query: 585 ILKDQ 571
I KD+
Sbjct: 358 IWKDR 372
>gb|AV557811.1|AV557811 AV557811 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ080f01F 3', mRNA sequence
Length = 454
Score = 66.6 bits (139), Expect(3) = 2e-023
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / -3
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 266 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 147
Score = 63.4 bits (132), Expect(3) = 2e-023
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -1 / -3
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA QY+++Y F +TARYWTE FAK +S
Sbjct: 362 DPQDAVVADQYMKNYQVFVSTARYWTETFAKKSS 261
Score = 21.7 bits (41), Expect(3) = 2e-023
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -3
Query: 588 DILKDQW 568
DILKDQW
Sbjct: 452 DILKDQW 432
>gb|BP564044.1|BP564044 BP564044 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-05-M17 3',
mRNA sequence
Length = 425
Score = 66.6 bits (139), Expect(2) = 4e-023
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / -3
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 264 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 145
Score = 64.3 bits (134), Expect(2) = 4e-023
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / -3
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 360 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 259
>gb|AV788864.1|AV788864 AV788864 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-81-E23 3',
mRNA sequence
Length = 413
Score = 66.6 bits (139), Expect(2) = 4e-023
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / -3
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 267 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 148
Score = 64.3 bits (134), Expect(2) = 4e-023
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / -3
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 363 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 262
>gb|AV803578.1|AV803578 AV803578 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-36-A02 3',
mRNA sequence
Length = 410
Score = 66.6 bits (139), Expect(2) = 4e-023
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / -3
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 264 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 145
Score = 64.3 bits (134), Expect(2) = 4e-023
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / -3
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 360 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 259
>gb|AV811599.1|AV811599 AV811599 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-68-N16 3',
mRNA sequence
Length = 411
Score = 66.6 bits (139), Expect(2) = 4e-023
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -1 / -3
Query: 396 TGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+ +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 265 SSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 146
Score = 64.3 bits (134), Expect(2) = 4e-023
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / -3
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFAKSAS 397
DPQDAVVA+QY+++Y F +TARYWTE FAK +S
Sbjct: 361 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS 260
>gb|AV531022.1|AV531022 AV531022 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB013f03F 3', mRNA sequence
Length = 532
Score = 79.4 bits (167), Expect(3) = 9e-023
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -1 / -1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPN++S
Sbjct: 526 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 380
Score = 35.9 bits (72), Expect(3) = 9e-023
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILKDQW
Sbjct: 385 NSNGSICLDILKDQW 341
Score = 31.8 bits (63), Expect(3) = 9e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / -3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 275 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 183
>dbj|AK117378.1| Arabidopsis thaliana At5g41080 mRNA for unknown protein, complete
cds, clone: RAFL16-95-M21
Length = 2157
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 160 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 306
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 301 NSNGSICLDILKEQW 345
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 412 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 504
>ref|NM_180784.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8);
ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript
variant AT5G41700.2 mRNA, complete cds
Length = 909
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 270 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 416
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 411 NSNGSICLDILKEQW 455
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 522 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 614
>ref|NM_180783.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8);
ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript
variant AT5G41700.1 mRNA, complete cds
Length = 864
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 225 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 371
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 366 NSNGSICLDILKEQW 410
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 477 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 569
>gb|AF370257.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC8
(At5g41700) mRNA, complete cds
Length = 810
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 219 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 365
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 360 NSNGSICLDILKEQW 404
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 471 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 563
>ref|NM_123535.2| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8);
ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript
variant AT5G41700.4 mRNA, complete cds
Length = 803
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 164 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 310
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 305 NSNGSICLDILKEQW 349
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 416 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 508
>gb|CF652849.1|CF652849 80-L020524-066-003-O20-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001O203Q 5-PRIME, mRNA sequence
Length = 760
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 152 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 298
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 293 NSNGSICLDILKEQW 337
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 404 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 496
>gb|AY054595.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8
(ubiquitin-protein ligase 8) (ubiquitin carrier protein
8) (MBK23.24) mRNA, complete cds
Length = 755
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 270 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 416
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 411 NSNGSICLDILKEQW 455
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 522 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 614
>gb|AY085670.1| Arabidopsis thaliana clone 16865 mRNA, complete sequence
Length = 747
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 225 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 371
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 366 NSNGSICLDILKEQW 410
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 477 DDPLVPEIAHMYKTDRAKYKATARNWTQKYA 569
>gb|BE038030.1|BE038030 AA08A03 AA Arabidopsis thaliana cDNA 5' similar to
ubiquitin-conjugating enzyme e2-17 kd 8, mRNA sequence
Length = 667
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 107 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 253
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 248 NSNGSICLDILKEQW 292
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 359 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 451
>gb|AF325009.2|AF325009 Arabidopsis thaliana AT5g41700 (AT5g41700/MBK23_24) mRNA, complete
cds
Length = 667
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 165 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 311
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 306 NSNGSICLDILKEQW 350
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 417 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 509
>gb|AV821831.1|AV821831 AV821831 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-A10 5',
mRNA sequence
Length = 660
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 271 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 417
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 412 NSNGSICLDILKEQW 456
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 523 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 615
>gb|AY057631.1| Arabidopsis thaliana AT5g41700/MBK23_24 mRNA, complete cds
Length = 653
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 160 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 306
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 301 NSNGSICLDILKEQW 345
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 412 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 504
>emb|BX832305.1|CNS0A1WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH64ZD08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 650
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 144 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 290
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 285 NSNGSICLDILKEQW 329
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 396 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 488
>gb|CB258369.1|CB258369 32-E011081-014-003-O08-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771O083Q 5-PRIME, mRNA sequence
Length = 636
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 165 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 311
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 306 NSNGSICLDILKEQW 350
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 417 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 509
>gb|CB256359.1|CB256359 81-E011641-027-006-A21-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772A216Q 5-PRIME, mRNA sequence
Length = 630
Score = 80.3 bits (169), Expect(3) = 1e-022
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F + I P YPF+PPK+ F T+++HPNI+S
Sbjct: 241 GEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINS 402
Score = 34.5 bits (69), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDIL+DQW
Sbjct: 397 NSNGSICLDILRDQW 441
Score = 31.8 bits (63), Expect(3) = 1e-022
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFAKSASTG 391
DDP +A Y D + ATAR W +A AS G
Sbjct: 508 DDPLVPEIAHVYKTDRARYEATAREWIPQYAIYASRG 618
>gb|BP562982.2|BP562982 BP562982 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-95-M21 5',
mRNA sequence
Length = 618
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 165 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 311
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 306 NSNGSICLDILKEQW 350
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 417 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 509
>gb|AV561423.1|AV561423 AV561423 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ151c08F 3', mRNA sequence
Length = 582
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / -1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 552 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 406
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 411 NSNGSICLDILKEQW 367
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / -1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 300 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 208
>gb|AV536922.1|AV536922 AV536922 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0701R 5', mRNA
sequence
Length = 537
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 186 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 332
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 327 NSNGSICLDILKEQW 371
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 438 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 530
>gb|AV553432.1|AV553432 AV553432 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ62e04R 5', mRNA sequence
Length = 522
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 164 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 310
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 305 NSNGSICLDILKEQW 349
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 416 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 508
>gb|AY072514.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8
(MBK23.24) mRNA, complete cds
Length = 476
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 94 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 240
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 235 NSNGSICLDILKEQW 279
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 346 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 438
>gb|AY063074.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 8
(At5g41700) mRNA, complete cds
Length = 478
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 94 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 240
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 235 NSNGSICLDILKEQW 279
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 346 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 438
>emb|CQ805486.1| Sequence 1897 from Patent WO2004035798
Length = 447
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 94 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 240
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 235 NSNGSICLDILKEQW 279
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 346 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 438
>gb|DQ027022.1| Arabidopsis thaliana ubiquitinating enzyme (At5g41700) mRNA,
complete cds
Length = 447
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GPA+SPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 94 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 240
Score = 34.1 bits (68), Expect(3) = 1e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 235 NSNGSICLDILKEQW 279
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + ATAR WT+ +A
Sbjct: 346 DDPLVPEIAHMYKTDRAKYEATARNWTQKYA 438
>gb|AF325019.2|AF325019 Arabidopsis thaliana AT4g27960 (AT4g27960/T13J8_70) mRNA, complete
cds
Length = 896
Score = 79.9 bits (168), Expect(3) = 3e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 311 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 457
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 452 NSNGSICLDILKEQW 496
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 563 DDPLVPEIAHMYKTDKNKYESTARTWTQKYA 655
>ref|NM_118934.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9);
ubiquitin conjugating enzyme/ ubiquitin-like activating
enzyme AT4G27960 (UBC9) transcript variant AT4G27960.2
mRNA, complete cds
Length = 896
Score = 79.9 bits (168), Expect(3) = 3e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 311 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 457
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 452 NSNGSICLDILKEQW 496
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 563 DDPLVPEIAHMYKTDKNKYESTARTWTQKYA 655
>ref|NM_001036151.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G64230 transcript variant
AT1G64230.2 mRNA, complete cds
Length = 885
Score = 79.4 bits (167), Expect(3) = 3e-022
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPN++S
Sbjct: 216 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 362
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 357 NSNGSICLDILKEQW 401
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 468 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 560
>ref|NM_105097.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G64230 transcript variant
AT1G64230.1 mRNA, complete cds
Length = 846
Score = 79.4 bits (167), Expect(3) = 3e-022
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPN++S
Sbjct: 228 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 374
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 369 NSNGSICLDILKEQW 413
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 480 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 572
>emb|BX816699.1|CNS0ABXP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH63ZG10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 782
Score = 79.4 bits (167), Expect(3) = 3e-022
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPN++S
Sbjct: 227 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 373
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 368 NSNGSICLDILKEQW 412
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 479 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 571
>emb|BX815683.1|CNS0ABHQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS83ZF06 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 776
Score = 79.4 bits (167), Expect(3) = 3e-022
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPN++S
Sbjct: 198 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 344
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 339 NSNGSICLDILKEQW 383
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 450 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 542
>gb|AF385718.1|AF385718 Arabidopsis thaliana At1g64230/F22C12_17 mRNA, complete cds
Length = 738
Score = 79.4 bits (167), Expect(3) = 3e-022
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPN++S
Sbjct: 220 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 366
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 361 NSNGSICLDILKEQW 405
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 472 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 564
>gb|AF480945.1| Arabidopsis thaliana ubiquitin conjugating enzyme UBC9A (UBC9A)
mRNA, complete cds
Length = 723
Score = 79.4 bits (167), Expect(3) = 3e-022
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPN++S
Sbjct: 181 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 327
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 322 NSNGSICLDILKEQW 366
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 433 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 525
>gb|BE038411.1|BE038411 AA17B06 AA Arabidopsis thaliana cDNA 5' similar to
ubiquitin-protein ligase ubc9, mRNA sequence
Length = 721
Score = 79.4 bits (167), Expect(3) = 3e-022
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -1 / +1
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPN++S
Sbjct: 226 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 372
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 367 NSNGSICLDILKEQW 411
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 478 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 570
>emb|Z14990.1|ATUBC9 A.thaliana UBC9 mRNA for ubiquitin conjugating enzyme homolog
Length = 687
Score = 79.9 bits (168), Expect(3) = 3e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 144 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 290
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 285 NSNGSICLDILKEQW 329
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 396 DDPLVPEIAHMYKTDKNKYESTARTWTQKYA 488
>ref|NM_179131.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9);
ubiquitin conjugating enzyme/ ubiquitin-like activating
enzyme AT4G27960 (UBC9) transcript variant AT4G27960.1
mRNA, complete cds
Length = 686
Score = 79.9 bits (168), Expect(3) = 3e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 173 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 319
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 314 NSNGSICLDILKEQW 358
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 425 DDPLVPEIAHMYKTDKNKYESTARTWTQKYA 517
>gb|CF651565.1|CF651565 13-L020361-066-002-J03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001J032Q 5-PRIME, mRNA sequence
Length = 679
Score = 79.9 bits (168), Expect(3) = 3e-022
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +3
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 189 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 335
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 330 NSNGSICLDILKEQW 374
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 441 DDPLVPEIAHMYKTDKNKYESTARTWTQKYA 533
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,621,095,978
Number of Sequences: 1013581
Number of extensions: 20813641
Number of successful extensions: 148016
Number of sequences better than 1.0e-020: 166
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 63524696532
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)