TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404863.2.1
(672 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV541661.1|AV541661 AV541661 Arabidopsis thaliana roots ... 195 9e-049
gb|AV563216.1|AV563216 AV563216 Arabidopsis thaliana green ... 195 9e-049
gb|CK120588.1|CK120588 207b24.p1 AtM1 Arabidopsis thaliana ... 195 9e-049
gb|CB252667.1|CB252667 20-E010931-019-003-G05-T7R MPIZ-ADIS... 195 9e-049
gb|CB253750.1|CB253750 89-E015391-019-006-A23-T7R MPIZ-ADIS... 195 9e-049
gb|AF076484.1|AF076484 Arabidopsis thaliana GDP-mannose pyr... 195 9e-049
gb|AF108660.1|AF108660 Arabidopsis thaliana CYT1 protein (c... 195 9e-049
emb|AJ275979.1|ATH275979 Arabidopsis thaliana gene for GDP-... 195 9e-049
gb|AY057541.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, ... 195 9e-049
gb|AF428297.1|AF428297 Arabidopsis thaliana At2g39770/T5I7.... 195 9e-049
gb|AF361812.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, ... 195 9e-049
gb|BT000697.1| Arabidopsis thaliana clone RAFL08-14-D02 (R1... 195 9e-049
gb|AY087698.1| Arabidopsis thaliana clone 37775 mRNA, compl... 195 9e-049
gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7... 195 9e-049
ref|NM_129535.2| Arabidopsis thaliana CYT1 (CYTOKINESIS DEF... 195 9e-049
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 195 9e-049
gb|AV519100.1|AV519100 AV519100 Arabidopsis thaliana aboveg... 195 1e-048
gb|AY133643.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, ... 195 1e-048
gb|BT006365.1| Arabidopsis thaliana At2g39770/T5I7.7 gene, ... 195 1e-048
dbj|BD248368.1| Gene participating in tolerance against env... 195 1e-048
emb|CQ805052.1| Sequence 1463 from Patent WO2004035798 195 1e-048
gb|BP581993.1|BP581993 BP581993 RAFL14 Arabidopsis thaliana... 194 2e-048
gb|AV794725.1|AV794725 AV794725 RAFL8 Arabidopsis thaliana ... 193 6e-048
gb|AV538851.1|AV538851 AV538851 Arabidopsis thaliana roots ... 189 6e-047
gb|BP585910.1|BP585910 BP585910 RAFL15 Arabidopsis thaliana... 189 8e-047
gb|BP573056.1|BP573056 BP573056 RAFL14 Arabidopsis thaliana... 185 1e-045
emb|BX819717.1|CNS0A8ID Arabidopsis thaliana Full-length cD... 185 1e-045
gb|BP573196.1|BP573196 BP573196 RAFL14 Arabidopsis thaliana... 184 2e-045
gb|BP618668.1|BP618668 BP618668 RAFL16 Arabidopsis thaliana... 180 3e-044
gb|BP572649.1|BP572649 BP572649 RAFL14 Arabidopsis thaliana... 154 2e-043
gb|BP587164.1|BP587164 BP587164 RAFL15 Arabidopsis thaliana... 175 1e-042
gb|BP639202.1|BP639202 BP639202 RAFL19 Arabidopsis thaliana... 149 4e-041
gb|AV802567.1|AV802567 AV802567 RAFL9 Arabidopsis thaliana ... 122 6e-041
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 167 2e-040
emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome... 167 2e-040
emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome ... 167 2e-040
gb|DQ056626.1| Arabidopsis thaliana putative GDP-mannose py... 167 2e-040
ref|NM_115416.1| Arabidopsis thaliana nucleotidyltransferas... 167 2e-040
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 167 2e-040
gb|BP572177.1|BP572177 BP572177 RAFL14 Arabidopsis thaliana... 139 5e-039
gb|CL494953.1|CL494953 SAIL_603_B08.v1 SAIL Collection Arab... 162 8e-039
gb|AV805852.1|AV805852 AV805852 RAFL9 Arabidopsis thaliana ... 160 3e-038
gb|BP588612.1|BP588612 BP588612 RAFL15 Arabidopsis thaliana... 158 2e-037
gb|BP591105.1|BP591105 BP591105 RAFL15 Arabidopsis thaliana... 158 2e-037
gb|AV565595.1|AV565595 AV565595 Arabidopsis thaliana green ... 156 7e-037
gb|BP574418.1|BP574418 BP574418 RAFL14 Arabidopsis thaliana... 102 3e-036
gb|BP581460.1|BP581460 BP581460 RAFL14 Arabidopsis thaliana... 153 6e-036
gb|AV439931.1|AV439931 AV439931 Arabidopsis thaliana above-... 110 1e-035
gb|BP584220.1|BP584220 BP584220 RAFL14 Arabidopsis thaliana... 151 2e-035
gb|AV817192.1|AV817192 AV817192 RAFL9 Arabidopsis thaliana ... 147 4e-034
gb|BP624153.1|BP624153 BP624153 RAFL17 Arabidopsis thaliana... 140 1e-033
gb|AV795522.1|AV795522 AV795522 RAFL8 Arabidopsis thaliana ... 88 1e-030
gb|AV566301.1|AV566301 AV566301 Arabidopsis thaliana green ... 134 2e-030
gb|BP580817.1|BP580817 BP580817 RAFL14 Arabidopsis thaliana... 63 2e-029
gb|BP657338.1|BP657338 BP657338 RAFL19 Arabidopsis thaliana... 76 3e-029
gb|BP569139.1|BP569139 BP569139 RAFL14 Arabidopsis thaliana... 109 9e-029
gb|BP781345.1|BP781345 BP781345 RAFL7 Arabidopsis thaliana ... 127 2e-028
gb|AV530852.1|AV530852 AV530852 Arabidopsis thaliana flower... 121 3e-026
gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 120 4e-026
gb|AY142530.1| Arabidopsis thaliana putative GDP-mannose py... 120 4e-026
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 120 4e-026
emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosom... 120 4e-026
ref|NM_119203.2| Arabidopsis thaliana nucleotidyltransferas... 120 4e-026
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 120 4e-026
gb|BP564831.1|BP564831 BP564831 RAFL14 Arabidopsis thaliana... 100 6e-026
gb|BP626637.1|BP626637 BP626637 RAFL17 Arabidopsis thaliana... 75 6e-026
gb|BP788478.1|BP788478 BP788478 RAFL7 Arabidopsis thaliana ... 88 2e-023
gb|BP637445.1|BP637445 BP637445 RAFL19 Arabidopsis thaliana... 55 3e-023
gb|BP663248.1|BP663248 BP663248 RAFL21 Arabidopsis thaliana... 65 6e-023
gb|BP783001.1|BP783001 BP783001 RAFL7 Arabidopsis thaliana ... 107 4e-022
gb|BP597244.1|BP597244 BP597244 RAFL15 Arabidopsis thaliana... 92 5e-021
gb|BP568511.1|BP568511 BP568511 RAFL14 Arabidopsis thaliana... 66 9e-021
>gb|AV541661.1|AV541661 AV541661 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ169g10F 3', mRNA sequence
Length = 588
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 446 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 267
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 266 EIYSNGGVVLPHKEIKSNILKPEIVM*K 183
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / -1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 417 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 238
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 237 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 148
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 292 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 444
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 187 HITISGFKMFDLISLCGK 240
>gb|AV563216.1|AV563216 AV563216 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ183c10F 3', mRNA sequence
Length = 551
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / -3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 450 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 271
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 270 EIYSNGGVVLPHKEIKSNILKPEIVM*K 187
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / -2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 421 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 242
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 241 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 152
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / +2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 296 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 448
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 191 HITISGFKMFDLISLCGK 244
>gb|CK120588.1|CK120588 207b24.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B24207
5-PRIME, mRNA sequence
Length = 635
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 165 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 344
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 345 EIYSNGGVVLPHKEIKSNILKPEIVM*K 428
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 194 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 373
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 374 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 463
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 319 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 167
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 424 HITISGFKMFDLISLCGK 371
>gb|CB252667.1|CB252667 20-E010931-019-003-G05-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768G053Q 5-PRIME, mRNA sequence
Length = 520
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 228 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 407
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 408 EIYSNGGVVLPHKEIKSNILKPEIVM*K 491
Score = 106 bits (227), Expect = 5e-022
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 257 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 436
Query: 210 PTERDQVKHFEA*DRHVRV 266
T+ DQ+KH EA D V++
Sbjct: 437 ATQGDQIKHLEARDSDVKM 493
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 382 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 230
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 487 HITISGFKMFDLISLCGK 434
>gb|CB253750.1|CB253750 89-E015391-019-006-A23-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A236Q 5-PRIME, mRNA sequence
Length = 450
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 15 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 194
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 195 EIYSNGGVVLPHKEIKSNILKPEIVM*K 278
Score = 106 bits (227), Expect = 5e-022
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 44 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 223
Query: 210 PTERDQVKHFEA*DRHVRV 266
T+ DQ+KH EA D V++
Sbjct: 224 ATQGDQIKHLEARDSDVKM 280
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 169 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 17
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 274 HITISGFKMFDLISLCGK 221
>gb|AF076484.1|AF076484 Arabidopsis thaliana GDP-mannose pyrophosphorylase (GMP1) mRNA,
complete cds
Length = 1490
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 978 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1157
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1158 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1241
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 1007 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1186
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 1187 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 1276
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1132 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 980
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1237 HITISGFKMFDLISLCGK 1184
>gb|AF108660.1|AF108660 Arabidopsis thaliana CYT1 protein (cyt1) mRNA, complete cds
Length = 1477
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 976 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1155
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1156 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1239
Score = 111 bits (238), Expect = 2e-023
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = +3 / +3
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 1005 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1184
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKFF 302
T+ DQ+KH EA D V++ + + L FF
Sbjct: 1185 ATQGDQIKHLEARDSDVKMRYYMCNFFLFFF 1277
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1130 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 978
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1235 HITISGFKMFDLISLCGK 1182
>emb|AJ275979.1|ATH275979 Arabidopsis thaliana gene for GDP-mannose pyrophosphorylase, gene for
vacuolar ribonuclease and gene for proline byosinthesis
codifying enzyme
Length = 9423
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 2510 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 2689
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 2690 EIYSNGGVVLPHKEIKSNILKPEIVM*K 2773
Score = 107 bits (228), Expect = 4e-022
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = +3 / +1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 2539 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 2718
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKFF 302
T+ DQ+KH EA D V++ + FF
Sbjct: 2719 ATQGDQIKHLEARDSDVKMRYYICATFFFFF 2811
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 2664 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 2512
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 2769 HITISGFKMFDLISLCGK 2716
>gb|AY057541.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, complete cds
Length = 1482
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 984 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1163
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1164 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1247
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 1013 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1192
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 1193 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 1282
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1138 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 986
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1243 HITISGFKMFDLISLCGK 1190
>gb|AF428297.1|AF428297 Arabidopsis thaliana At2g39770/T5I7.7 mRNA, complete cds
Length = 1440
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 984 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1163
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1164 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1247
Score = 108 bits (231), Expect = 2e-022
Identities = 42/90 (46%), Positives = 59/90 (65%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D+P GCS + QWR C
Sbjct: 1013 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDYPR*GCSCER*DL*QWRSCF 1192
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 1193 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 1282
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1138 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 986
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1243 HITISGFKMFDLISLCGK 1190
>gb|AF361812.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, complete cds
Length = 1450
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 984 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1163
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1164 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1247
Score = 106 bits (227), Expect = 5e-022
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 1013 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1192
Query: 210 PTERDQVKHFEA*DRHVRV 266
T+ DQ+KH EA D V++
Sbjct: 1193 ATQGDQIKHLEARDSDVKM 1249
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1138 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 986
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1243 HITISGFKMFDLISLCGK 1190
>gb|BT000697.1| Arabidopsis thaliana clone RAFL08-14-D02 (R11125) putative
GDP-mannose pyrophosphorylase (At2g39770) mRNA, complete
cds
Length = 1444
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 984 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1163
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1164 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1247
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 1013 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1192
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 1193 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 1282
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1138 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 986
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1243 HITISGFKMFDLISLCGK 1190
>gb|AY087698.1| Arabidopsis thaliana clone 37775 mRNA, complete sequence
Length = 1480
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 980 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1159
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1160 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1243
Score = 111 bits (238), Expect = 2e-023
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = +3 / +1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 1009 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1188
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKFF 302
T+ DQ+KH EA D V++ + + L FF
Sbjct: 1189 ATQGDQIKHLEARDSDVKMRYYMCNFFLFFF 1281
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1134 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 982
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1239 HITISGFKMFDLISLCGK 1186
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
sequence
Length = 92624
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 33014 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 33193
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 33194 EIYSNGGVVLPHKEIKSNILKPEIVM*K 33277
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / +1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 33043 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 33222
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 33223 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 33312
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 33168 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 33016
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 33273 HITISGFKMFDLISLCGK 33220
>ref|NM_129535.2| Arabidopsis thaliana CYT1 (CYTOKINESIS DEFECTIVE 1);
nucleotidyltransferase AT2G39770 (CYT1) mRNA, complete
cds
Length = 1488
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 984 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1163
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1164 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1247
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / +2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 1013 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1192
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 1193 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 1282
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1138 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 986
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1243 HITISGFKMFDLISLCGK 1190
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 195 bits (421), Expect = 9e-049
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 16597559 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 16597738
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 16597739 EIYSNGGVVLPHKEIKSNILKPEIVM*K 16597822
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / +1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 16597588 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 16597767
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 16597768 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 16597857
>gb|AV519100.1|AV519100 AV519100 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD48c11F 3', mRNA
sequence
Length = 461
Score = 195 bits (420), Expect = 1e-048
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1 / -1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 359 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 180
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 179 EIYSNGGVVLPPKEIKSNILKPEIVM*K 96
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / -3
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 330 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 151
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 150 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 61
Score = 94.1 bits (199), Expect(2) = 2e-022
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 205 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 357
Score = 33.6 bits (67), Expect(2) = 2e-022
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS G+
Sbjct: 100 HITISGFKMFDLISLGGK 153
>gb|AY133643.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, complete cds
Length = 1086
Score = 195 bits (420), Expect = 1e-048
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 826 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1005
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKS+ILKPEIVM*
Sbjct: 1006 EIYSNGGVVLPHKEIKSNILKPEIVM* 1086
Score = 105 bits (224), Expect = 1e-021
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +3 / +3
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 855 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1034
Query: 210 PTERDQVKHFEA*DRHV 260
T+ DQ+KH EA D V
Sbjct: 1035 ATQGDQIKHLEARDSDV 1085
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 980 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 828
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1085 HITISGFKMFDLISLCGK 1032
>gb|BT006365.1| Arabidopsis thaliana At2g39770/T5I7.7 gene, complete cds
Length = 1086
Score = 195 bits (420), Expect = 1e-048
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 826 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1005
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKS+ILKPEIVM*
Sbjct: 1006 EIYSNGGVVLPHKEIKSNILKPEIVM* 1086
Score = 105 bits (224), Expect = 1e-021
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +3 / +3
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 855 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1034
Query: 210 PTERDQVKHFEA*DRHV 260
T+ DQ+KH EA D V
Sbjct: 1035 ATQGDQIKHLEARDSDV 1085
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 980 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 828
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1085 HITISGFKMFDLISLCGK 1032
>dbj|BD248368.1| Gene participating in tolerance against environmental stress
Length = 1109
Score = 195 bits (420), Expect = 1e-048
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 847 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1026
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKS+ILKPEIVM*
Sbjct: 1027 EIYSNGGVVLPHKEIKSNILKPEIVM* 1107
Score = 106 bits (226), Expect = 7e-022
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3 / +3
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 876 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1055
Query: 210 PTERDQVKHFEA*DRHVR 263
T+ DQ+KH EA D V+
Sbjct: 1056 ATQGDQIKHLEARDSDVK 1109
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 1001 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 849
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1106 HITISGFKMFDLISLCGK 1053
>emb|CQ805052.1| Sequence 1463 from Patent WO2004035798
Length = 1086
Score = 195 bits (420), Expect = 1e-048
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 826 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1005
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKS+ILKPEIVM*
Sbjct: 1006 EIYSNGGVVLPHKEIKSNILKPEIVM* 1086
Score = 105 bits (224), Expect = 1e-021
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +3 / +3
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 855 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1034
Query: 210 PTERDQVKHFEA*DRHV 260
T+ DQ+KH EA D V
Sbjct: 1035 ATQGDQIKHLEARDSDV 1085
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 980 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 828
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1085 HITISGFKMFDLISLCGK 1032
>gb|BP581993.1|BP581993 BP581993 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-34-F08 3',
mRNA sequence
Length = 468
Score = 194 bits (418), Expect = 2e-048
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 350 GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 171
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+Y+NGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 170 EIYTNGGVVLPHKEIKSNILKPEIVM*K 87
Score = 108 bits (231), Expect = 2e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / -1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 321 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DLYQWRSCF 142
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 141 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 52
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 196 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 348
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 91 HITISGFKMFDLISLCGK 144
>gb|AV794725.1|AV794725 AV794725 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-14-D02 3',
mRNA sequence
Length = 445
Score = 193 bits (415), Expect = 6e-048
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = +1 / -3
Query: 4 PGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDE 183
PGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE
Sbjct: 443 PGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDE 264
Query: 184 VYSNGGVVLPQKEIKSSILKPEIVM*E 264
+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 263 IYSNGGVVLPHKEIKSNILKPEIVM*K 183
Score = 107 bits (228), Expect = 4e-022
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3 / -2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 417 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 238
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 237 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 148
Score = 94.1 bits (199), Expect(2) = 5e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST PG
Sbjct: 292 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSTMQPG 444
Score = 39.1 bits (79), Expect(2) = 5e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 187 HITISGFKMFDLISLCGK 240
>gb|AV538851.1|AV538851 AV538851 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ122c12F 3', mRNA sequence
Length = 535
Score = 189 bits (408), Expect = 6e-047
Identities = 78/88 (88%), Positives = 82/88 (93%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRL RCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 507 GPGCIVESGVRLYRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSD 328
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKSSILK EIVM*+
Sbjct: 327 EMYSNGGVVLPHKEIKSSILKAEIVM*K 244
Score = 118 bits (252), Expect = 2e-025
Identities = 51/86 (59%), Positives = 59/86 (68%)
Frame = -2 / +2
Query: 260 HMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRAHCPTVECHPIMLFEMQ 81
H+TIS FKMLDLIS CG+ PR+V+FSI AH PTVECHP++L E+
Sbjct: 248 HITISAFKMLDLISLCGKTTPPLLYISSLT*TSSPRIVMFSILAH*PTVECHPMILLEIH 427
Query: 80 ACFLIRTPRMTVQRESLTPSSTTHPG 3
ACFL+RTPRMTV R SLTP ST PG
Sbjct: 428 ACFLMRTPRMTVHR*SLTPDSTMQPG 505
Score = 106 bits (226), Expect = 7e-022
Identities = 42/90 (46%), Positives = 57/90 (63%)
Frame = +3 / -1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 478 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DV*QWRSCF 299
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQVKH E D V++ + + F
Sbjct: 298 ATQGDQVKHLEGRDSDVKMRYYMCNFFFFF 209
Score = 103 bits (219), Expect = 7e-021
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = -1 / +1
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVRDA 82
SH L LQ+A*LDL +W+NN++IA++L+ MNIL +D H+L P PL+N *VPPD+ RD
Sbjct: 247 SHHYLCLQDA*LDLLVWQNNSSIAIHLIAHMNILTEDRHVLDPGPLTNR*VPPDDTARDT 426
Query: 81 GMLLDTHTTHDSAA 40
MLLD +THD A+
Sbjct: 427 RMLLDADSTHDRAS 468
>gb|BP585910.1|BP585910 BP585910 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-04-F14 3',
mRNA sequence
Length = 456
Score = 189 bits (407), Expect = 8e-047
Identities = 76/88 (86%), Positives = 82/88 (93%)
Frame = +1 / -3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GV+LSRCT MRGVRIKKHACIS+ IIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 445 GPGCIVESGVKLSRCTFMRGVRIKKHACISSIIIGWHSTVGQWARIENMTILGEDVHVSD 266
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 265 EIYSNGGVVLPHKEIKSNILKPEIVM*K 182
Score = 105 bits (225), Expect = 1e-021
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = +3 / -2
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LE ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 416 QTLPMHVHAWSPHQEACVYLEHYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 237
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKF 299
T+ DQ+KH EA D V++ + + F
Sbjct: 236 ATQGDQIKHLEARDSDVKMRYYMCNFFFFF 147
Score = 90.9 bits (192), Expect(2) = 4e-023
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -2 / +3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP+++ E+ ACFL+RTPRM V RESLTP ST PG
Sbjct: 291 RIVMFSILAH*PTVECHPMIMLEIHACFLMRTPRMNVHRESLTPDSTMQPG 443
Score = 39.1 bits (79), Expect(2) = 4e-023
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 186 HITISGFKMFDLISLCGK 239
>gb|BP573056.1|BP573056 BP573056 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-82-L13 3',
mRNA sequence
Length = 459
Score = 185 bits (399), Expect = 1e-045
Identities = 74/87 (85%), Positives = 81/87 (93%)
Frame = +1 / -3
Query: 4 PGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDE 183
PGC+ E GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE
Sbjct: 442 PGCIFESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDE 263
Query: 184 VYSNGGVVLPQKEIKSSILKPEIVM*E 264
+Y+NGGV LP KEIKS+ILKPEI+M*+
Sbjct: 262 IYNNGGVFLPHKEIKSNILKPEIMM*K 182
Score = 91.3 bits (193), Expect(2) = 2e-022
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = -2 / +3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP S PG
Sbjct: 291 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDSKMQPG 443
Score = 36.3 bits (73), Expect(2) = 2e-022
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 260 HMTISGFKMLDLISFCGR 207
H+ ISGFKM DLIS CG+
Sbjct: 186 HIIISGFKMFDLISLCGK 239
>emb|BX819717.1|CNS0A8ID Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS1ZC08 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1343
Score = 185 bits (399), Expect = 1e-045
Identities = 76/88 (86%), Positives = 82/88 (93%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GP C+VE GV+LSRCTVMRGVRIKKHA IS+SIIGWHSTVGQWARIENMTILGEDVH D
Sbjct: 923 GPRCIVESGVKLSRCTVMRGVRIKKHAFISSSIIGWHSTVGQWARIENMTILGEDVHVSD 1102
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 1103 EIYSNGGVVLPHKEIKSNILKPEIVM*K 1186
Score = 106 bits (227), Expect = 5e-022
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +3 / +1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 952 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 1131
Query: 210 PTERDQVKHFEA*DRHVRV 266
T+ DQ+KH EA D V++
Sbjct: 1132 ATQGDQIKHLEARDSDVKM 1188
Score = 90.0 bits (190), Expect(2) = 8e-023
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST G
Sbjct: 1077 RIVMFSILAH*PTVECHPMILLEINACFLMRTPRMTVHRESLTPDSTMQRG 925
Score = 39.1 bits (79), Expect(2) = 8e-023
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 1182 HITISGFKMFDLISLCGK 1129
>gb|BP573196.1|BP573196 BP573196 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-83-F06 3',
mRNA sequence
Length = 436
Score = 184 bits (397), Expect = 2e-045
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +1 / -1
Query: 10 CVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVY 189
C+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE+Y
Sbjct: 436 CIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIY 257
Query: 190 SNGGVVLPQKEIKSSILKPEIVM*E 264
SNGGV LP KEIKS+ILKPEIVM*+
Sbjct: 256 SNGGVFLPHKEIKSNILKPEIVM*K 182
Score = 88.6 bits (187), Expect(2) = 2e-022
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -2 / +3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSST 15
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST
Sbjct: 291 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDST 431
Score = 39.1 bits (79), Expect(2) = 2e-022
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 186 HITISGFKMFDLISLCGK 239
>gb|BP618668.1|BP618668 BP618668 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-29-D16 3',
mRNA sequence
Length = 447
Score = 180 bits (388), Expect = 3e-044
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = +1 / -1
Query: 4 PGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDE 183
PGC+V GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQ ARIENMTILGE+VH DE
Sbjct: 438 PGCIV*SGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQLARIENMTILGENVHVSDE 259
Query: 184 VYSNGGVVLPQKEIKSSILKPEIVM*E 264
+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 258 IYSNGGVVLPHKEIKSNILKPEIVM*K 178
Score = 87.2 bits (184), Expect(2) = 5e-022
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -2 / +2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FSI A+ PTVECHP++L E+ ACFL+RTPRMTV RESLTP T PG
Sbjct: 287 RIVMFSILAN*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPD*TMQPG 439
Score = 39.1 bits (79), Expect(2) = 5e-022
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKM DLIS CG+
Sbjct: 182 HITISGFKMFDLISLCGK 235
>gb|BP572649.1|BP572649 BP572649 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-80-N14 3',
mRNA sequence
Length = 432
Score = 154 bits (330), Expect(2) = 2e-043
Identities = 63/70 (90%), Positives = 67/70 (95%)
Frame = +1 / -1
Query: 55 RGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSS 234
RGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE+YSNGGVVLP KEIKS+
Sbjct: 297 RGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSNGGVVLPHKEIKSN 118
Query: 235 ILKPEIVM*E 264
ILKPEIVM*+
Sbjct: 117 ILKPEIVM*K 88
Score = 89.5 bits (189), Expect(2) = 9e-021
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = -1 / +1
Query: 273 TGELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNA 94
T SH L LQ+ * DL +W+NN++IA+ L+ MNIL +D H+L P PL+N *VPPD+
Sbjct: 79 TISFSHHYLWLQDV*FDLLVWQNNSSIAIDLIAHMNILTEDRHVLDPGPLTNR*VPPDDT 258
Query: 93 VRDAGMLLDTHTT 55
RD MLLD +T
Sbjct: 259 ARDTRMLLDADST 297
Score = 44.6 bits (91), Expect(2) = 2e-043
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / -3
Query: 1 GPGCVVEDGVRLSRCTVM 54
GPGC+VE GVRLSRCTVM
Sbjct: 352 GPGCIVESGVRLSRCTVM 299
Score = 32.7 bits (65), Expect(2) = 9e-021
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 53 MTVQRESLTPSSTTHPG 3
MTV RESLTP ST PG
Sbjct: 300 MTVHRESLTPDSTMQPG 350
>gb|BP587164.1|BP587164 BP587164 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-41-G23 3',
mRNA sequence
Length = 434
Score = 175 bits (377), Expect = 1e-042
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +1 / -2
Query: 25 GVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGV 204
GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE+YSNGGV
Sbjct: 433 GVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSNGGV 254
Query: 205 VLPQKEIKSSILKPEIVM*E 264
VLP KEI+S+ILKPEIVM*+
Sbjct: 253 VLPHKEIQSNILKPEIVM*K 194
Score = 107 bits (228), Expect = 4e-022
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = +3 / -1
Query: 30 EAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCS 209
+ P+H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C
Sbjct: 428 QTLPMHGHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCF 249
Query: 210 PTERDQVKHFEA*DRHVRVLQF*LQYILKFF 302
T+ D +KH EA D V++ + + FF
Sbjct: 248 ATQGDPIKHLEARDSDVKMRYYMCNFFFFFF 156
>gb|BP639202.1|BP639202 BP639202 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-46-O10 3',
mRNA sequence
Length = 413
Score = 149 bits (321), Expect(2) = 4e-041
Identities = 62/72 (86%), Positives = 66/72 (91%)
Frame = +1 / -2
Query: 49 VMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIK 228
VM GVRIK HACIS SIIGWHSTVGQWARIENMTILGEDVH DE+YS+GGVVLP KEIK
Sbjct: 316 VMPGVRIKNHACISTSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSHGGVVLPHKEIK 137
Query: 229 SSILKPEIVM*E 264
S+ILKPEIVM*+
Sbjct: 136 SNILKPEIVM*K 101
Score = 40.5 bits (82), Expect(2) = 4e-041
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1 / -3
Query: 1 GPGCVVEDGVRLSRCT 48
GPGC+VE GVRLSRCT
Sbjct: 363 GPGCIVESGVRLSRCT 316
>gb|AV802567.1|AV802567 AV802567 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-32-G08 3',
mRNA sequence
Length = 399
Score = 122 bits (261), Expect(2) = 6e-041
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +1 / -2
Query: 10 CVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGE 162
C+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGE
Sbjct: 398 CIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGE 246
Score = 88.6 bits (187), Expect(2) = 2e-023
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSST 15
R+V+FSI AH PTVECHP++L E+ ACFL+RTPRMTV RESLTP ST
Sbjct: 253 RIVMFSILAH*PTVECHPMILLEIHACFLMRTPRMTVHRESLTPDST 393
Score = 67.5 bits (141), Expect(2) = 6e-041
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +1 / -1
Query: 163 DVHGGDEVYSNGGVVLPQKEIKSSILKPEIVM*E 264
DVH DE+YSNGGVVLP KEIKS+ILKPEIVM*+
Sbjct: 246 DVHVSDEIYSNGGVVLPHKEIKSNILKPEIVM*K 145
Score = 42.3 bits (86), Expect(2) = 2e-023
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = -1 / +1
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNI 163
SH L LQ+ * DL +W+NN++IA+ L+ MNI
Sbjct: 148 SHHYLWLQDV*FDLLVWQNNSSIAIDLIAHMNI 246
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 167 bits (360), Expect = 2e-040
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLS CTVMRGV +K++ACIS+SIIGWHSTVGQWAR+ENM+ILG++V+ D
Sbjct: 20582073 GPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCD 20582252
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+Y NGGVVL KEIKS ILKP+IVM*
Sbjct: 20582253 EIYCNGGVVLHNKEIKSDILKPDIVM* 20582333
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16
Length = 103240
Score = 167 bits (360), Expect = 2e-040
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLS CTVMRGV +K++ACIS+SIIGWHSTVGQWAR+ENM+ILG++V+ D
Sbjct: 101097 GPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCD 101276
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+Y NGGVVL KEIKS ILKP+IVM*
Sbjct: 101277 EIYCNGGVVLHNKEIKSDILKPDIVM* 101357
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16
Length = 103785
Score = 167 bits (360), Expect = 2e-040
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLS CTVMRGV +K++ACIS+SIIGWHSTVGQWAR+ENM+ILG++V+ D
Sbjct: 6709 GPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCD 6888
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+Y NGGVVL KEIKS ILKP+IVM*
Sbjct: 6889 EIYCNGGVVLHNKEIKSDILKPDIVM* 6969
>gb|DQ056626.1| Arabidopsis thaliana putative GDP-mannose pyrophosphorylase
(At3g55590) mRNA, complete cds
Length = 1095
Score = 167 bits (360), Expect = 2e-040
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLS CTVMRGV +K++ACIS+SIIGWHSTVGQWAR+ENM+ILG++V+ D
Sbjct: 835 GPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCD 1014
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+Y NGGVVL KEIKS ILKP+IVM*
Sbjct: 1015 EIYCNGGVVLHNKEIKSDILKPDIVM* 1095
>ref|NM_115416.1| Arabidopsis thaliana nucleotidyltransferase AT3G55590 mRNA, complete
cds
Length = 1095
Score = 167 bits (360), Expect = 2e-040
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLS CTVMRGV +K++ACIS+SIIGWHSTVGQWAR+ENM+ILG++V+ D
Sbjct: 835 GPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCD 1014
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+Y NGGVVL KEIKS ILKP+IVM*
Sbjct: 1015 EIYCNGGVVLHNKEIKSDILKPDIVM* 1095
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 167 bits (360), Expect = 2e-040
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLS CTVMRGV +K++ACIS+SIIGWHSTVGQWAR+ENM+ILG++V+ D
Sbjct: 20629600 GPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCD 20629779
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+Y NGGVVL KEIKS ILKP+IVM*
Sbjct: 20629780 EIYCNGGVVLHNKEIKSDILKPDIVM* 20629860
>gb|BP572177.1|BP572177 BP572177 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-78-P18 3',
mRNA sequence
Length = 434
Score = 139 bits (299), Expect(2) = 5e-039
Identities = 55/67 (82%), Positives = 58/67 (86%)
Frame = +1 / -3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+ E GVRLSRC VMRGV IKKHA IS SIIGWHST GQWARIENMTILGEDVH D
Sbjct: 387 GPGCIFESGVRLSRCPVMRGVPIKKHAFISTSIIGWHSTFGQWARIENMTILGEDVHLSD 208
Query: 181 EVYSNGG 201
E+Y+NGG
Sbjct: 207 EIYTNGG 187
Score = 43.7 bits (89), Expect(2) = 5e-039
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1 / -1
Query: 199 GVVLPQKEIKSSILKPEIVM*E 264
GVVLP KEIKS+ILKPEIVM*+
Sbjct: 188 GVVLPHKEIKSNILKPEIVM*K 123
>gb|CL494953.1|CL494953 SAIL_603_B08.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_603_B08.v1, DNA sequence
Length = 965
Score = 162 bits (349), Expect = 8e-039
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE G RLS CTVMRGV +K++ACIS+SIIGWHS+VGQWAR+ENM+ILG++V+ D
Sbjct: 628 GPGCVVESGGRLSHCTVMRGVHVKRYACISSSIIGWHSSVGQWARVENMSILGKNVYVCD 449
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+Y NGGVVL KEIKS ILKP+IVM*
Sbjct: 448 EIYCNGGVVLHNKEIKSDILKPDIVM* 368
>gb|AV805852.1|AV805852 AV805852 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-44-H04 3',
mRNA sequence
Length = 399
Score = 160 bits (343), Expect(2) = 3e-038
Identities = 64/74 (86%), Positives = 69/74 (93%)
Frame = +1 / -2
Query: 13 VVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYS 192
+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE+YS
Sbjct: 338 IVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYS 159
Query: 193 NGGVVLPQKEIKSS 234
+GGV LP KEIKS+
Sbjct: 158 HGGVFLPHKEIKST 117
Score = 21.7 bits (41), Expect(2) = 3e-038
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 232 SILKPEIVM*E 264
+ILKPEIVM*+
Sbjct: 120 NILKPEIVM*K 88
>gb|BP588612.1|BP588612 BP588612 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-46-O04 3',
mRNA sequence
Length = 407
Score = 158 bits (339), Expect = 2e-037
Identities = 65/72 (90%), Positives = 69/72 (95%)
Frame = +1 / -1
Query: 49 VMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIK 228
VMRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE+YSNGGVVLP KEIK
Sbjct: 407 VMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSNGGVVLPHKEIK 228
Query: 229 SSILKPEIVM*E 264
S+ILKPEIVM*+
Sbjct: 227 SNILKPEIVM*K 192
>gb|BP591105.1|BP591105 BP591105 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-13-G22 3',
mRNA sequence
Length = 429
Score = 158 bits (339), Expect = 2e-037
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = +1 / -3
Query: 46 TVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEI 225
T MRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE+YSNGGVVLP KEI
Sbjct: 427 TFMRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSNGGVVLPHKEI 248
Query: 226 KSSILKPEIVM*E 264
KS+ILKPEIVM*+
Sbjct: 247 KSNILKPEIVM*K 209
Score = 103 bits (219), Expect = 7e-021
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +3 / -2
Query: 45 HCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*RGIQQWRCCSPTERD 224
H HAW +QEAC++LEQ++RVALN W+MG DRE+D P GCS + QWR C T+ D
Sbjct: 428 HVHAWSPHQEACVYLEQYHRVALNGWSMGQDREHDDPR*GCSCER*DL*QWRSCFATQGD 249
Query: 225 QVKHFEA*DRHVRVLQF*LQYILKF 299
Q+KH EA D V++ + + F
Sbjct: 248 QIKHLEARDSDVKMRYYMCNFFFFF 174
>gb|AV565595.1|AV565595 AV565595 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227c01F 3', mRNA sequence
Length = 428
Score = 156 bits (335), Expect = 7e-037
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +1 / -3
Query: 52 MRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKS 231
MRGVRIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE+YSNGGVVLP KEIKS
Sbjct: 426 MRGVRIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSNGGVVLPHKEIKS 247
Query: 232 SILKPEIVM*E 264
+ILKPEIVM*+
Sbjct: 246 NILKPEIVM*K 214
>gb|BP574418.1|BP574418 BP574418 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-87-O22 3',
mRNA sequence
Length = 380
Score = 102 bits (218), Expect(2) = 3e-036
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +1 / -1
Query: 109 HSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSSILKPEIVM*E 264
HSTVGQWARIEN+TILGED H DE+YSNGGV P KEIKS+ILKPEIVM*+
Sbjct: 242 HSTVGQWARIENITILGEDFHLSDEIYSNGGVFFPHKEIKSNILKPEIVM*K 87
Score = 71.6 bits (150), Expect(2) = 3e-036
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIG 105
GPGC+VE GVRLSR TVMRGVRIKKHA IS SIIG
Sbjct: 349 GPGCIVESGVRLSRFTVMRGVRIKKHAFISTSIIG 245
>gb|BP581460.1|BP581460 BP581460 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-32-A14 3',
mRNA sequence
Length = 468
Score = 153 bits (328), Expect = 6e-036
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = +1 / -2
Query: 7 GCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEV 186
GC+VE GVRLS ++H CIS+SIIGWHSTVGQWARIENMTILGEDVH DE+
Sbjct: 443 GCIVESGVRLSHAPSCVDSASRRHGCISSSIIGWHSTVGQWARIENMTILGEDVHVSDEI 264
Query: 187 YSNGGVVLPQKEIKSSILKPEIVM*E 264
YSNGGV LP KEIKS+ILKPEIVM*+
Sbjct: 263 YSNGGVFLPHKEIKSNILKPEIVM*K 186
>gb|AV439931.1|AV439931 AV439931 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD29c07_f 3', mRNA
sequence
Length = 383
Score = 110 bits (234), Expect(2) = 1e-035
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +1 / -1
Query: 106 WHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSSILKPEIVM*E 264
WHSTVGQWAR+ENMTILGEDVH DE+YSNG VVLP KEIKS+ILKPEIVM*+
Sbjct: 296 WHSTVGQWARMENMTILGEDVHVSDEMYSNGVVVLPHKEIKSNILKPEIVM*K 138
Score = 70.7 bits (148), Expect(2) = 4e-021
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = -1 / +3
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VP 106
SH L LQ+ * DL +W+NN +IA++L+ MNIL +D H+L+P PL+N *VP
Sbjct: 141 SHHYLWLQDV*FDLLVWQNNYSIAIHLIAHMNILTEDRHVLHPGPLTNR*VP 296
Score = 62.0 bits (129), Expect(2) = 1e-035
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1 / -3
Query: 25 GVRLSRCTVMRGVRIKKHACISNSIIG 105
GVRLSRCTVMRGVRIKKHACIS SIIG
Sbjct: 378 GVRLSRCTVMRGVRIKKHACISISIIG 298
Score = 52.8 bits (109), Expect(2) = 4e-021
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -2 / +2
Query: 104 PIMLFEMQACFLIRTPRMTVQRESLTP 24
P++L E+ ACFL+RTPRMTV RESLTP
Sbjct: 299 PMILIEIHACFLMRTPRMTVHRESLTP 379
>gb|BP584220.1|BP584220 BP584220 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-45-E24 3',
mRNA sequence
Length = 409
Score = 151 bits (325), Expect = 2e-035
Identities = 65/88 (73%), Positives = 73/88 (82%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+ E GVRLSRC VM VRIKKHA IS SIIG HSTV QWARIENMTILGED H D
Sbjct: 366 GPGCIFESGVRLSRCPVMP*VRIKKHAFISTSIIGCHSTVCQWARIENMTILGEDFHLSD 187
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM*E 264
E+YS+G V LP KEIKS+ILKP+I++*+
Sbjct: 186 EIYSHGRVFLPHKEIKSNILKPQILI*K 103
>gb|AV817192.1|AV817192 AV817192 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-93-I03 3',
mRNA sequence
Length = 401
Score = 147 bits (315), Expect = 4e-034
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = +1 / -1
Query: 64 RIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSSILK 243
RIKKHACIS+SIIGWHSTVGQWARIENMTILGEDVH DE+YSNGGVVLP KEIKS+ILK
Sbjct: 401 RIKKHACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSNGGVVLPHKEIKSNILK 222
Query: 244 PEIVM*E 264
PEIVM*+
Sbjct: 221 PEIVM*K 201
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,467,425,480
Number of Sequences: 1013581
Number of extensions: 19998078
Number of successful extensions: 159354
Number of sequences better than 1.0e-020: 78
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 41535200280
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)