TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.3
(1028 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO... 451 e-125
gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1... 451 e-125
emb|AX505699.1| Sequence 394 from Patent WO0216655 451 e-125
ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT... 451 e-125
dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhea... 445 e-123
ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G2... 445 e-123
dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for put... 443 e-123
emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGO... 443 e-123
emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cD... 381 e-104
ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G3... 294 2e-096
gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P... 81 1e-094
ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G2... 233 5e-092
gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 72 8e-081
gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis tha... 82 8e-081
gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11... 82 2e-078
gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flower... 205 2e-067
gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveg... 237 3e-061
gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveg... 237 6e-061
gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14... 74 1e-057
ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G2... 145 7e-056
emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cD... 145 3e-054
ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 132 2e-050
ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 132 2e-050
gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein... 132 2e-050
gb|BT000941.1| Arabidopsis thaliana clone C105223 putative ... 132 2e-050
gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence 132 2e-050
ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G4381... 132 1e-048
emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwil... 132 1e-048
emb|AX505737.1| Sequence 432 from Patent WO0216655 132 1e-048
emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cD... 132 1e-046
gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveg... 181 3e-044
gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana ... 132 3e-043
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 136 1e-042
ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1... 136 1e-042
gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds 136 1e-042
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 136 7e-041
gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS... 131 9e-040
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 115 1e-038
gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis tha... 115 2e-038
ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G3... 111 2e-038
gb|T21581.1|T21581 3589 Lambda-PRL2 Arabidopsis thaliana cD... 140 7e-038
gb|CA781259.1|CA781259 014A08AF Infected Arabidopsis Leaf A... 90 3e-036
gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed... 99 1e-034
emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cD... 132 4e-034
ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2)... 115 8e-033
dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unk... 115 8e-033
gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complet... 115 8e-033
gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2... 64 3e-032
gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green ... 136 6e-032
gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K... 64 6e-032
gb|AV523023.1|AV523023 AV523023 Arabidopsis thaliana aboveg... 140 8e-032
gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Siliqu... 137 7e-031
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 136 1e-030
gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveg... 127 4e-030
gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-... 132 2e-029
gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots ... 132 2e-029
gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green ... 132 2e-029
gb|CK121100.1|CK121100 204j21.p1 AtM1 Arabidopsis thaliana ... 72 6e-028
emb|BX943872.1| Arabidopsis thaliana T-DNA flanking sequenc... 72 1e-026
gb|AF154272.1|AF154272 Arabidopsis thaliana PINHEAD (PINHEA... 58 1e-025
gb|BU635669.1|BU635669 028G09 Infected Arabidopsis Leaf Ara... 105 3e-024
gb|BE528457.1|BE528457 M79F16STM Arabidopsis developing see... 111 4e-023
gb|CD534067.1|CD534067 35F4 Arabidopsis Leaf Senescence Lib... 72 2e-022
gb|CC794982.1|CC794982 SALK_060402.40.25.x Arabidopsis thal... 72 9e-022
gb|AV546094.1|AV546094 AV546094 Arabidopsis thaliana roots ... 106 9e-022
emb|BX943873.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 1e-021
dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosom... 58 4e-021
gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis tha... 55 7e-021
gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC ... 55 9e-021
>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
mRNA, complete cds
Length = 3171
Score = 451 bits (978), Expect = e-125
Identities = 180/261 (68%), Positives = 205/261 (78%)
Frame = +3 / +2
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPLISKYRASVRTQ K EMI+SL K EDDG+I+E L+D
Sbjct: 2123 SPGQSDVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVD 2302
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FYTSS KRKP+ +IIFRDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++AQKNH
Sbjct: 2303 FYTSSNKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNH 2482
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
HTKFF P P+NVPPGT++DNK+CHPKN DFY+CAHAGMIGTTRPTHYH+L+DEIGFS D
Sbjct: 2483 HTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSAD 2662
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXX 722
+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 2663 ELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGP 2842
Query: 723 VPVQELPRLHEKVRSSMFFC* 785
+ V +LPRL + V +SMFFC*
Sbjct: 2843 ISVAQLPRLKDNVANSMFFC* 2905
Score = 212 bits (458), Expect = 1e-053
Identities = 101/227 (44%), Positives = 147/227 (64%)
Frame = -1 / -3
Query: 683 LRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVV 504
LR + +L+E LSSCQ+ +AD N+ G A LVHI ER+ + L+ + + LI+QDVV
Sbjct: 2803 LRLIFKLHERPKLSSCQVSIADRRNNRNGTGASLVHIGERVDKFLKFVS*KTNLIIQDVV 2624
Query: 503 VSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGI 324
VSW S +HSS+ T VEI VLW+ FVV+ W +I E+ +MILL + Q+EL +
Sbjct: 2623 VSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWV 2444
Query: 323 PFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFS 144
P + + ASLDDL++ N+Q+LI+L F +T+PE +++ SL R GVE+ Q L D I+FS
Sbjct: 2443 PICV*ELASLDDLIKFNIQNLIELRFTHTIPENYDMLWFSLIRAGVEIYQQLLDNAIVFS 2264
Query: 143 FPWLKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMSRR 3
+L + +NH L +RCS+F + P RT++SS+ R IR+SRR
Sbjct: 2263 SIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTHHSSDGRDIRLSRR 2123
Score = 178 bits (384), Expect(2) = 1e-061
Identities = 96/165 (58%), Positives = 105/165 (63%)
Frame = -2 / -1
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 2901 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2722
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLL 422
MA+VLLWY S KPISS R W**VG VVPIIPA A *KS FFG LL
Sbjct: 2721 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2542
Query: 421 STTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMI 287
S VPGGT SG G KNLV**FF A N GF F+S++LQASMI
Sbjct: 2541 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI 2407
Score = 89.0 bits (188), Expect(2) = 5e-025
Identities = 45/102 (44%), Positives = 52/102 (50%)
Frame = -3 / -2
Query: 699 HDWRTSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSH 520
H S T +T *T Q EQLP SR Q+ W C FGTH+RA+ P Q + SH
Sbjct: 2819 HGLMMSQTDLQTS*TSQAEQLPSEHSRSAQQQKWHWCFFGTHRRASGQVPEVRQLKNQSH 2640
Query: 519 HAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHY 394
H G GSEL * +SFQ H RN SL CC L H+
Sbjct: 2639 HTGRGSELGG*FQSFQREHRGRNHCSLGDIFCCQ*LSLEEHF 2514
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 49/128 (38%), Positives = 73/128 (57%)
Frame = +2 / +1
Query: 143 S*R*WSDPGVSD*LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EM 322
+*R W GV+ LHQ EK ++ QG C S+ SG+E+* ++HRGLQ ++
Sbjct: 2263 N*RRWHYQGVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGLQALRRKL 2442
Query: 323 ESQVHVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANS 502
E +V +ESS+ + + + C +R+ QQ++ KE FL +C+ WND +Y NS
Sbjct: 2443 EPKVPFVGGSKESSYQVLPANVS*KCSSRDNH*QQNMSPKEQ*FLPLCSRWNDWNYPPNS 2622
Query: 503 LPHPA**D 526
LP P **D
Sbjct: 2623 LPRPV**D 2646
Score = 81.3 bits (171), Expect(2) = 1e-061
Identities = 39/71 (54%), Positives = 42/71 (59%)
Frame = -2 / -1
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFL ELV*K L +SIIS VRTDALY +I GHS ELTTA
Sbjct: 2334 SGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDISGHSLELTTA 2155
Query: 34 ATDGTSECPGD 2
A DGTS+CPGD
Sbjct: 2154 AMDGTSDCPGD 2122
Score = 60.6 bits (126), Expect(2) = 1e-026
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 566 ALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSW 700
ALLCVPK+H H C+ LL + GSCS W VH+V V D+++ W
Sbjct: 2686 ALLCVPKKHQCHFCCCADLLCSLGSCSAWDVHEV*RSV*DIIKPW 2820
Score = 48.3 bits (99), Expect(2) = 5e-025
Identities = 32/83 (38%), Positives = 38/83 (45%)
Frame = -3 / -2
Query: 363 DDSSGQ*ST*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCR 184
DDS + T S CKPR* Q S PD* + H P* * FS +WCR
Sbjct: 2483 DDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*KL*YALVFSYSSWCR 2304
Query: 183 SQSDTPGSDHHLQLPVA*TMSQS 115
+ TP H LQ +* +QS
Sbjct: 2303 NLPATP**CHRLQFHFS*QGTQS 2235
>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
mRNA, complete cds
Length = 2806
Score = 451 bits (978), Expect = e-125
Identities = 180/261 (68%), Positives = 205/261 (78%)
Frame = +3 / +1
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPLISKYRASVRTQ K EMI+SL K EDDG+I+E L+D
Sbjct: 1993 SPGQSDVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVD 2172
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FYTSS KRKP+ +IIFRDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++AQKNH
Sbjct: 2173 FYTSSNKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNH 2352
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
HTKFF P P+NVPPGT++DNK+CHPKN DFY+CAHAGMIGTTRPTHYH+L+DEIGFS D
Sbjct: 2353 HTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSAD 2532
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXX 722
+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 2533 ELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGP 2712
Query: 723 VPVQELPRLHEKVRSSMFFC* 785
+ V +LPRL + V +SMFFC*
Sbjct: 2713 ISVAQLPRLKDNVANSMFFC* 2775
Score = 212 bits (458), Expect = 1e-053
Identities = 101/227 (44%), Positives = 147/227 (64%)
Frame = -1 / -2
Query: 683 LRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVV 504
LR + +L+E LSSCQ+ +AD N+ G A LVHI ER+ + L+ + + LI+QDVV
Sbjct: 2673 LRLIFKLHERPKLSSCQVSIADRRNNRNGTGASLVHIGERVDKFLKFVS*KTNLIIQDVV 2494
Query: 503 VSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGI 324
VSW S +HSS+ T VEI VLW+ FVV+ W +I E+ +MILL + Q+EL +
Sbjct: 2493 VSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWV 2314
Query: 323 PFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFS 144
P + + ASLDDL++ N+Q+LI+L F +T+PE +++ SL R GVE+ Q L D I+FS
Sbjct: 2313 PICV*ELASLDDLIKFNIQNLIELRFTHTIPENYDMLWFSLIRAGVEIYQQLLDNAIVFS 2134
Query: 143 FPWLKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMSRR 3
+L + +NH L +RCS+F + P RT++SS+ R IR+SRR
Sbjct: 2133 SIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTHHSSDGRDIRLSRR 1993
Score = 178 bits (384), Expect(2) = 1e-061
Identities = 96/165 (58%), Positives = 105/165 (63%)
Frame = -2 / -3
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 2771 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2592
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLL 422
MA+VLLWY S KPISS R W**VG VVPIIPA A *KS FFG LL
Sbjct: 2591 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2412
Query: 421 STTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMI 287
S VPGGT SG G KNLV**FF A N GF F+S++LQASMI
Sbjct: 2411 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI 2277
Score = 89.0 bits (188), Expect(2) = 5e-025
Identities = 45/102 (44%), Positives = 52/102 (50%)
Frame = -3 / -1
Query: 699 HDWRTSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSH 520
H S T +T *T Q EQLP SR Q+ W C FGTH+RA+ P Q + SH
Sbjct: 2689 HGLMMSQTDLQTS*TSQAEQLPSEHSRSAQQQKWHWCFFGTHRRASGQVPEVRQLKNQSH 2510
Query: 519 HAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHY 394
H G GSEL * +SFQ H RN SL CC L H+
Sbjct: 2509 HTGRGSELGG*FQSFQREHRGRNHCSLGDIFCCQ*LSLEEHF 2384
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 49/128 (38%), Positives = 73/128 (57%)
Frame = +2 / +3
Query: 143 S*R*WSDPGVSD*LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EM 322
+*R W GV+ LHQ EK ++ QG C S+ SG+E+* ++HRGLQ ++
Sbjct: 2133 N*RRWHYQGVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGLQALRRKL 2312
Query: 323 ESQVHVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANS 502
E +V +ESS+ + + + C +R+ QQ++ KE FL +C+ WND +Y NS
Sbjct: 2313 EPKVPFVGGSKESSYQVLPANVS*KCSSRDNH*QQNMSPKEQ*FLPLCSRWNDWNYPPNS 2492
Query: 503 LPHPA**D 526
LP P **D
Sbjct: 2493 LPRPV**D 2516
Score = 81.3 bits (171), Expect(2) = 1e-061
Identities = 39/71 (54%), Positives = 42/71 (59%)
Frame = -2 / -3
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFL ELV*K L +SIIS VRTDALY +I GHS ELTTA
Sbjct: 2204 SGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDISGHSLELTTA 2025
Query: 34 ATDGTSECPGD 2
A DGTS+CPGD
Sbjct: 2024 AMDGTSDCPGD 1992
Score = 60.6 bits (126), Expect(2) = 1e-026
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2 / +3
Query: 566 ALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSW 700
ALLCVPK+H H C+ LL + GSCS W VH+V V D+++ W
Sbjct: 2556 ALLCVPKKHQCHFCCCADLLCSLGSCSAWDVHEV*RSV*DIIKPW 2690
Score = 48.3 bits (99), Expect(2) = 5e-025
Identities = 32/83 (38%), Positives = 38/83 (45%)
Frame = -3 / -1
Query: 363 DDSSGQ*ST*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCR 184
DDS + T S CKPR* Q S PD* + H P* * FS +WCR
Sbjct: 2353 DDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*KL*YALVFSYSSWCR 2174
Query: 183 SQSDTPGSDHHLQLPVA*TMSQS 115
+ TP H LQ +* +QS
Sbjct: 2173 NLPATP**CHRLQFHFS*QGTQS 2105
>emb|AX505699.1| Sequence 394 from Patent WO0216655
Length = 2793
Score = 451 bits (978), Expect = e-125
Identities = 180/261 (68%), Positives = 205/261 (78%)
Frame = +3 / +1
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPLISKYRASVRTQ K EMI+SL K EDDG+I+E L+D
Sbjct: 2011 SPGQSDVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVD 2190
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FYTSS KRKP+ +IIFRDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++AQKNH
Sbjct: 2191 FYTSSNKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNH 2370
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
HTKFF P P+NVPPGT++DNK+CHPKN DFY+CAHAGMIGTTRPTHYH+L+DEIGFS D
Sbjct: 2371 HTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSAD 2550
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXX 722
+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 2551 ELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGP 2730
Query: 723 VPVQELPRLHEKVRSSMFFC* 785
+ V +LPRL + V +SMFFC*
Sbjct: 2731 ISVAQLPRLKDNVANSMFFC* 2793
Score = 212 bits (458), Expect = 1e-053
Identities = 101/227 (44%), Positives = 147/227 (64%)
Frame = -1 / -1
Query: 683 LRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVV 504
LR + +L+E LSSCQ+ +AD N+ G A LVHI ER+ + L+ + + LI+QDVV
Sbjct: 2691 LRLIFKLHERPKLSSCQVSIADRRNNRNGTGASLVHIGERVDKFLKFVS*KTNLIIQDVV 2512
Query: 503 VSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGI 324
VSW S +HSS+ T VEI VLW+ FVV+ W +I E+ +MILL + Q+EL +
Sbjct: 2511 VSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWV 2332
Query: 323 PFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFS 144
P + + ASLDDL++ N+Q+LI+L F +T+PE +++ SL R GVE+ Q L D I+FS
Sbjct: 2331 PICV*ELASLDDLIKFNIQNLIELRFTHTIPENYDMLWFSLIRAGVEIYQQLLDNAIVFS 2152
Query: 143 FPWLKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMSRR 3
+L + +NH L +RCS+F + P RT++SS+ R IR+SRR
Sbjct: 2151 SIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTHHSSDGRDIRLSRR 2011
Score = 178 bits (384), Expect(2) = 1e-061
Identities = 96/165 (58%), Positives = 105/165 (63%)
Frame = -2 / -2
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 2789 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2610
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLL 422
MA+VLLWY S KPISS R W**VG VVPIIPA A *KS FFG LL
Sbjct: 2609 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2430
Query: 421 STTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMI 287
S VPGGT SG G KNLV**FF A N GF F+S++LQASMI
Sbjct: 2429 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI 2295
Score = 89.0 bits (188), Expect(2) = 5e-025
Identities = 45/102 (44%), Positives = 52/102 (50%)
Frame = -3 / -3
Query: 699 HDWRTSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSH 520
H S T +T *T Q EQLP SR Q+ W C FGTH+RA+ P Q + SH
Sbjct: 2707 HGLMMSQTDLQTS*TSQAEQLPSEHSRSAQQQKWHWCFFGTHRRASGQVPEVRQLKNQSH 2528
Query: 519 HAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHY 394
H G GSEL * +SFQ H RN SL CC L H+
Sbjct: 2527 HTGRGSELGG*FQSFQREHRGRNHCSLGDIFCCQ*LSLEEHF 2402
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 49/128 (38%), Positives = 73/128 (57%)
Frame = +2 / +3
Query: 143 S*R*WSDPGVSD*LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EM 322
+*R W GV+ LHQ EK ++ QG C S+ SG+E+* ++HRGLQ ++
Sbjct: 2151 N*RRWHYQGVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGLQALRRKL 2330
Query: 323 ESQVHVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANS 502
E +V +ESS+ + + + C +R+ QQ++ KE FL +C+ WND +Y NS
Sbjct: 2331 EPKVPFVGGSKESSYQVLPANVS*KCSSRDNH*QQNMSPKEQ*FLPLCSRWNDWNYPPNS 2510
Query: 503 LPHPA**D 526
LP P **D
Sbjct: 2511 LPRPV**D 2534
Score = 81.3 bits (171), Expect(2) = 1e-061
Identities = 39/71 (54%), Positives = 42/71 (59%)
Frame = -2 / -2
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFL ELV*K L +SIIS VRTDALY +I GHS ELTTA
Sbjct: 2222 SGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDISGHSLELTTA 2043
Query: 34 ATDGTSECPGD 2
A DGTS+CPGD
Sbjct: 2042 AMDGTSDCPGD 2010
Score = 60.6 bits (126), Expect(2) = 1e-026
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2 / +3
Query: 566 ALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSW 700
ALLCVPK+H H C+ LL + GSCS W VH+V V D+++ W
Sbjct: 2574 ALLCVPKKHQCHFCCCADLLCSLGSCSAWDVHEV*RSV*DIIKPW 2708
Score = 48.3 bits (99), Expect(2) = 5e-025
Identities = 32/83 (38%), Positives = 38/83 (45%)
Frame = -3 / -3
Query: 363 DDSSGQ*ST*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCR 184
DDS + T S CKPR* Q S PD* + H P* * FS +WCR
Sbjct: 2371 DDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*KL*YALVFSYSSWCR 2192
Query: 183 SQSDTPGSDHHLQLPVA*TMSQS 115
+ TP H LQ +* +QS
Sbjct: 2191 NLPATP**CHRLQFHFS*QGTQS 2123
>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA,
complete cds
Length = 3166
Score = 451 bits (978), Expect = e-125
Identities = 180/261 (68%), Positives = 205/261 (78%)
Frame = +3 / +2
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPLISKYRASVRTQ K EMI+SL K EDDG+I+E L+D
Sbjct: 2123 SPGQSDVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVD 2302
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FYTSS KRKP+ +IIFRDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++AQKNH
Sbjct: 2303 FYTSSNKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNH 2482
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
HTKFF P P+NVPPGT++DNK+CHPKN DFY+CAHAGMIGTTRPTHYH+L+DEIGFS D
Sbjct: 2483 HTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSAD 2662
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXX 722
+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 2663 ELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGP 2842
Query: 723 VPVQELPRLHEKVRSSMFFC* 785
+ V +LPRL + V +SMFFC*
Sbjct: 2843 ISVAQLPRLKDNVANSMFFC* 2905
Score = 212 bits (458), Expect = 1e-053
Identities = 101/227 (44%), Positives = 147/227 (64%)
Frame = -1 / -1
Query: 683 LRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVV 504
LR + +L+E LSSCQ+ +AD N+ G A LVHI ER+ + L+ + + LI+QDVV
Sbjct: 2803 LRLIFKLHERPKLSSCQVSIADRRNNRNGTGASLVHIGERVDKFLKFVS*KTNLIIQDVV 2624
Query: 503 VSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGI 324
VSW S +HSS+ T VEI VLW+ FVV+ W +I E+ +MILL + Q+EL +
Sbjct: 2623 VSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWV 2444
Query: 323 PFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFS 144
P + + ASLDDL++ N+Q+LI+L F +T+PE +++ SL R GVE+ Q L D I+FS
Sbjct: 2443 PICV*ELASLDDLIKFNIQNLIELRFTHTIPENYDMLWFSLIRAGVEIYQQLLDNAIVFS 2264
Query: 143 FPWLKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMSRR 3
+L + +NH L +RCS+F + P RT++SS+ R IR+SRR
Sbjct: 2263 SIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTHHSSDGRDIRLSRR 2123
Score = 178 bits (384), Expect(2) = 1e-061
Identities = 96/165 (58%), Positives = 105/165 (63%)
Frame = -2 / -2
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 2901 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2722
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLL 422
MA+VLLWY S KPISS R W**VG VVPIIPA A *KS FFG LL
Sbjct: 2721 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2542
Query: 421 STTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMI 287
S VPGGT SG G KNLV**FF A N GF F+S++LQASMI
Sbjct: 2541 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI 2407
Score = 89.0 bits (188), Expect(2) = 5e-025
Identities = 45/102 (44%), Positives = 52/102 (50%)
Frame = -3 / -3
Query: 699 HDWRTSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSH 520
H S T +T *T Q EQLP SR Q+ W C FGTH+RA+ P Q + SH
Sbjct: 2819 HGLMMSQTDLQTS*TSQAEQLPSEHSRSAQQQKWHWCFFGTHRRASGQVPEVRQLKNQSH 2640
Query: 519 HAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHY 394
H G GSEL * +SFQ H RN SL CC L H+
Sbjct: 2639 HTGRGSELGG*FQSFQREHRGRNHCSLGDIFCCQ*LSLEEHF 2514
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 49/128 (38%), Positives = 73/128 (57%)
Frame = +2 / +1
Query: 143 S*R*WSDPGVSD*LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EM 322
+*R W GV+ LHQ EK ++ QG C S+ SG+E+* ++HRGLQ ++
Sbjct: 2263 N*RRWHYQGVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGLQALRRKL 2442
Query: 323 ESQVHVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANS 502
E +V +ESS+ + + + C +R+ QQ++ KE FL +C+ WND +Y NS
Sbjct: 2443 EPKVPFVGGSKESSYQVLPANVS*KCSSRDNH*QQNMSPKEQ*FLPLCSRWNDWNYPPNS 2622
Query: 503 LPHPA**D 526
LP P **D
Sbjct: 2623 LPRPV**D 2646
Score = 81.3 bits (171), Expect(2) = 1e-061
Identities = 39/71 (54%), Positives = 42/71 (59%)
Frame = -2 / -2
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFL ELV*K L +SIIS VRTDALY +I GHS ELTTA
Sbjct: 2334 SGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDISGHSLELTTA 2155
Query: 34 ATDGTSECPGD 2
A DGTS+CPGD
Sbjct: 2154 AMDGTSDCPGD 2122
Score = 60.6 bits (126), Expect(2) = 1e-026
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 566 ALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSW 700
ALLCVPK+H H C+ LL + GSCS W VH+V V D+++ W
Sbjct: 2686 ALLCVPKKHQCHFCCCADLLCSLGSCSAWDVHEV*RSV*DIIKPW 2820
Score = 48.3 bits (99), Expect(2) = 5e-025
Identities = 32/83 (38%), Positives = 38/83 (45%)
Frame = -3 / -3
Query: 363 DDSSGQ*ST*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCR 184
DDS + T S CKPR* Q S PD* + H P* * FS +WCR
Sbjct: 2483 DDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*KL*YALVFSYSSWCR 2304
Query: 183 SQSDTPGSDHHLQLPVA*TMSQS 115
+ TP H LQ +* +QS
Sbjct: 2303 NLPATP**CHRLQFHFS*QGTQS 2235
>dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhead-like protein, partial
cds, clone: RAFL22-12-J01
Length = 1966
Score = 445 bits (966), Expect = e-123
Identities = 173/261 (66%), Positives = 208/261 (79%)
Frame = +3 / +3
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG R+WPLISKY+A VRTQS KMEMID+LFKP +D+G+ RE L+D
Sbjct: 963 SPGQSDIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLD 1142
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FY SS RKP+ +IIFRDGVSESQFNQVLNIEL Q+++ACKFLD+ W+PKFT+I+AQKNH
Sbjct: 1143 FYYSSENRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNH 1322
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
HTKFF PDNVPPGT++D+++CHP+NFDFY+CAHAGMIGTTRPTHYH+L+DEIGF+ D
Sbjct: 1323 HTKFFQSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATD 1502
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXX 722
DLQELVHSLSYVYQRSTTAISVVAP+CYAHLAAAQ+G +K++E+
Sbjct: 1503 DLQELVHSLSYVYQRSTTAISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGMTTPGA 1682
Query: 723 VPVQELPRLHEKVRSSMFFC* 785
VPV +P+LH V +SMFFC*
Sbjct: 1683 VPVPPMPQLHNNVSTSMFFC* 1745
Score = 212 bits (457), Expect = 2e-053
Identities = 100/260 (38%), Positives = 159/260 (61%)
Frame = -1 / -3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S +EH + ++Q R R+ +R +M LR L L+ ++L SCQM V ND
Sbjct: 1745 STEEHGG*NIIVQLRHRWHRDCSRCGHSSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 1566
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
* APLV I +RMH+ L+++ + L++Q++V+ WP S +H+SM +EI+V W+ D
Sbjct: 1565 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 1386
Query: 425 VVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTF 246
V+ SW +II SR E+ V++LLGN +L +P +IKK A L L+Q N+++LI+L
Sbjct: 1385 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRL 1206
Query: 245 ANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRD 66
A T+PE ++++ + T V+V Q P+ + +F+ ++ +NHFHF *L A C +F D
Sbjct: 1205 AYTIPENNDVLWFPIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*D 1026
Query: 65 KRPFTRTNNSSNRRYIRMSR 6
+ P + +NSSN YIR++R
Sbjct: 1025 EWPLS*AHNSSN*WYIRLAR 966
Score = 103 bits (220), Expect(3) = 3e-053
Identities = 52/81 (64%), Positives = 54/81 (66%)
Frame = -2 / -1
Query: 529 PISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFW 350
PISS R W* VGLVVPI+PA A *KSK G Q LS VPGGTLSG KN V FFW
Sbjct: 1489 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 1310
Query: 349 AIINVNLGFHFSSRNLQASMI 287
A I VN G H SSRNL A +I
Sbjct: 1309 ATITVNFGCHVSSRNLHACII 1247
Score = 83.1 bits (175), Expect(3) = 4e-028
Identities = 43/109 (39%), Positives = 65/109 (59%)
Frame = +2 / +2
Query: 182 LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEES 361
LL QF E + ++ QG C R SV S + +*+ ++ G+Q+S** + S+V+ D CPEE
Sbjct: 1142 LLLQFRE*ETRAHHYFQGWCKRVSVQSSS*Y*IGSDDAGMQVS**YVASEVYSDSCPEEP 1321
Query: 362 SH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLP 508
H + + *C +RN Q L +L FL + CW+D +Y+AN+LP
Sbjct: 1322 PHKVLPVSRP**CSSRNNH*QPDLSPTQL*FLSLRPCWHDWNYKANTLP 1468
Score = 76.2 bits (160), Expect(3) = 3e-053
Identities = 38/71 (53%), Positives = 41/71 (57%)
Frame = -2 / -1
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFLF EL *K GL SIISI D VRT ALYFE+ GH ELTTA
Sbjct: 1174 SGFLFSEL**KSNKSSLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTTA 995
Query: 34 ATDGTSECPGD 2
A DG S+ PG+
Sbjct: 994 AIDGISDWPGE 962
Score = 70.7 bits (148), Expect(3) = 3e-053
Identities = 35/68 (51%), Positives = 41/68 (60%)
Frame = -2 / -1
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATT 605
QQKN+E+ T C G TGT P V PP LE+VSD SS F+ P * GATT
Sbjct: 1744 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 1565
Query: 604 DMAVVLLW 581
++AVVLLW
Sbjct: 1564 EIAVVLLW 1541
Score = 48.3 bits (99), Expect(3) = 4e-028
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2 / +2
Query: 563 FALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSWR 703
F++LC+P+EH+ +SRC+ +LR+ GSC+ +V V D + WR
Sbjct: 1523 FSVLCLPEEHHCDLSRCTCMLRSFGSCTDGNCDEV*RVV*DFFEPWR 1663
Score = 34.1 bits (68), Expect(3) = 4e-028
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 56 MASYLEIQSICPHPITKNGND* 121
MA++L+I +C H IT+NGND*
Sbjct: 1016 MATHLKI*GMCTHTITQNGND* 1081
>ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G21150 mRNA, complete cds
Length = 3018
Score = 445 bits (966), Expect = e-123
Identities = 173/261 (66%), Positives = 208/261 (79%)
Frame = +3 / +3
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG R+WPLISKY+A VRTQS KMEMID+LFKP +D+G+ RE L+D
Sbjct: 2025 SPGQSDIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLD 2204
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FY SS RKP+ +IIFRDGVSESQFNQVLNIEL Q+++ACKFLD+ W+PKFT+I+AQKNH
Sbjct: 2205 FYYSSENRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNH 2384
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
HTKFF PDNVPPGT++D+++CHP+NFDFY+CAHAGMIGTTRPTHYH+L+DEIGF+ D
Sbjct: 2385 HTKFFQSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATD 2564
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXX 722
DLQELVHSLSYVYQRSTTAISVVAP+CYAHLAAAQ+G +K++E+
Sbjct: 2565 DLQELVHSLSYVYQRSTTAISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGA 2744
Query: 723 VPVQELPRLHEKVRSSMFFC* 785
VPV +P+LH V +SMFFC*
Sbjct: 2745 VPVPPMPQLHNNVSTSMFFC* 2807
Score = 211 bits (456), Expect = 2e-053
Identities = 100/260 (38%), Positives = 159/260 (61%)
Frame = -1 / -2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S +EH + ++Q R R+ +R +M LR L L+ ++L SCQM V ND
Sbjct: 2807 STEEHGG*NIIVQLRHRWHRDCSRCGDSSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 2628
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
* APLV I +RMH+ L+++ + L++Q++V+ WP S +H+SM +EI+V W+ D
Sbjct: 2627 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2448
Query: 425 VVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTF 246
V+ SW +II SR E+ V++LLGN +L +P +IKK A L L+Q N+++LI+L
Sbjct: 2447 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRL 2268
Query: 245 ANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRD 66
A T+PE ++++ + T V+V Q P+ + +F+ ++ +NHFHF *L A C +F D
Sbjct: 2267 AYTIPENNDVLWFPIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*D 2088
Query: 65 KRPFTRTNNSSNRRYIRMSR 6
+ P + +NSSN YIR++R
Sbjct: 2087 EWPLS*AHNSSN*WYIRLAR 2028
Score = 103 bits (220), Expect(3) = 3e-053
Identities = 52/81 (64%), Positives = 54/81 (66%)
Frame = -2 / -3
Query: 529 PISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFW 350
PISS R W* VGLVVPI+PA A *KSK G Q LS VPGGTLSG KN V FFW
Sbjct: 2551 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2372
Query: 349 AIINVNLGFHFSSRNLQASMI 287
A I VN G H SSRNL A +I
Sbjct: 2371 ATITVNFGCHVSSRNLHACII 2309
Score = 83.1 bits (175), Expect(3) = 4e-028
Identities = 43/109 (39%), Positives = 65/109 (59%)
Frame = +2 / +2
Query: 182 LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEES 361
LL QF E + ++ QG C R SV S + +*+ ++ G+Q+S** + S+V+ D CPEE
Sbjct: 2204 LLLQFRE*ETRAHHYFQGWCKRVSVQSSS*Y*IGSDDAGMQVS**YVASEVYSDSCPEEP 2383
Query: 362 SH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLP 508
H + + *C +RN Q L +L FL + CW+D +Y+AN+LP
Sbjct: 2384 PHKVLPVSRP**CSSRNNH*QPDLSPTQL*FLSLRPCWHDWNYKANTLP 2530
Score = 76.2 bits (160), Expect(3) = 3e-053
Identities = 38/71 (53%), Positives = 41/71 (57%)
Frame = -2 / -3
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFLF EL *K GL SIISI D VRT ALYFE+ GH ELTTA
Sbjct: 2236 SGFLFSEL**KSNKSSLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTTA 2057
Query: 34 ATDGTSECPGD 2
A DG S+ PG+
Sbjct: 2056 AIDGISDWPGE 2024
Score = 70.7 bits (148), Expect(3) = 3e-053
Identities = 35/68 (51%), Positives = 41/68 (60%)
Frame = -2 / -3
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATT 605
QQKN+E+ T C G TGT P V PP LE+VSD SS F+ P * GATT
Sbjct: 2806 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 2627
Query: 604 DMAVVLLW 581
++AVVLLW
Sbjct: 2626 EIAVVLLW 2603
Score = 48.3 bits (99), Expect(3) = 4e-028
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2 / +2
Query: 563 FALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSWR 703
F++LC+P+EH+ +SRC+ +LR+ GSC+ +V V D + WR
Sbjct: 2585 FSVLCLPEEHHCDLSRCTCMLRSFGSCTDGNCDEV*RVV*DFFEPWR 2725
Score = 34.1 bits (68), Expect(3) = 4e-028
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 56 MASYLEIQSICPHPITKNGND* 121
MA++L+I +C H IT+NGND*
Sbjct: 2078 MATHLKI*GMCTHTITQNGND* 2143
>dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative zwille/pinhead,
complete cds, clone: RAFL19-56-B01
Length = 3090
Score = 443 bits (962), Expect = e-123
Identities = 172/261 (65%), Positives = 207/261 (79%)
Frame = +3 / +2
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG R+WPLISKY+A VRTQS KMEMID+LFKP +D+G+ RE L+D
Sbjct: 2090 SPGQSDIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLD 2269
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FY SS RKP+ +IIFRDGVSESQFNQVLNIEL Q+++ACKFLD+ W+PKFT+I+AQKNH
Sbjct: 2270 FYYSSENRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNH 2449
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
HTKFF PDNVPPGT++D+++CHP+NFDFY+CAHAGMIGTTRPTHYH+L+DEIGF+ D
Sbjct: 2450 HTKFFQSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATD 2629
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXX 722
DLQELVHSLSYVYQRSTTAISVV P+CYAHLAAAQ+G +K++E+
Sbjct: 2630 DLQELVHSLSYVYQRSTTAISVVVPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGA 2809
Query: 723 VPVQELPRLHEKVRSSMFFC* 785
VPV +P+LH V +SMFFC*
Sbjct: 2810 VPVPPMPQLHNNVSTSMFFC* 2872
Score = 205 bits (443), Expect = 1e-051
Identities = 99/260 (38%), Positives = 158/260 (60%)
Frame = -1 / -3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S +EH + ++Q R R+ +R +M LR L L+ ++L SCQM V ND
Sbjct: 2872 STEEHGG*NIIVQLRHRWHRDCSRCGDSSMARRSLRQLFILHHSSHLCSCQMSVTYRYND 2693
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
* APLV I +RMH+ L+++ + L++Q++V+ WP S +H+SM +EI+V W+ D
Sbjct: 2692 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2513
Query: 425 VVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTF 246
V+ SW +II SR E+ V++LLGN +L +P +IKK A L L+Q N+++LI+L
Sbjct: 2512 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRL 2333
Query: 245 ANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRD 66
A T+PE ++++ + T V+V Q P+ + +F+ ++ +NHFHF *L A +F D
Sbjct: 2332 AYTIPENNDVLWFPIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTRLIF*D 2153
Query: 65 KRPFTRTNNSSNRRYIRMSR 6
+ P + +NSSN YIR++R
Sbjct: 2152 EWPLS*AHNSSN*WYIRLAR 2093
Score = 103 bits (220), Expect(3) = 9e-053
Identities = 52/81 (64%), Positives = 54/81 (66%)
Frame = -2 / -1
Query: 529 PISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFW 350
PISS R W* VGLVVPI+PA A *KSK G Q LS VPGGTLSG KN V FFW
Sbjct: 2616 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2437
Query: 349 AIINVNLGFHFSSRNLQASMI 287
A I VN G H SSRNL A +I
Sbjct: 2436 ATITVNFGCHVSSRNLHACII 2374
Score = 83.1 bits (175), Expect(3) = 2e-028
Identities = 43/109 (39%), Positives = 65/109 (59%)
Frame = +2 / +1
Query: 182 LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEES 361
LL QF E + ++ QG C R SV S + +*+ ++ G+Q+S** + S+V+ D CPEE
Sbjct: 2269 LLLQFRE*ETRAHHYFQGWCKRVSVQSSS*Y*IGSDDAGMQVS**YVASEVYSDSCPEEP 2448
Query: 362 SH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLP 508
H + + *C +RN Q L +L FL + CW+D +Y+AN+LP
Sbjct: 2449 PHKVLPVSRP**CSSRNNH*QPDLSPTQL*FLSLRPCWHDWNYKANTLP 2595
Score = 76.2 bits (160), Expect(3) = 9e-053
Identities = 38/71 (53%), Positives = 41/71 (57%)
Frame = -2 / -1
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFLF EL *K GL SIISI D VRT ALYFE+ GH ELTTA
Sbjct: 2301 SGFLFSEL**KSNKSSLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTTA 2122
Query: 34 ATDGTSECPGD 2
A DG S+ PG+
Sbjct: 2121 AIDGISDWPGE 2089
Score = 68.9 bits (144), Expect(3) = 9e-053
Identities = 34/68 (50%), Positives = 40/68 (58%)
Frame = -2 / -1
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATT 605
QQKN+E+ T C G TGT P V PP LE+VSD SS F+ P * G TT
Sbjct: 2871 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGTTT 2692
Query: 604 DMAVVLLW 581
++AVVLLW
Sbjct: 2691 EIAVVLLW 2668
Score = 48.3 bits (99), Expect(3) = 2e-028
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2 / +1
Query: 563 FALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSWR 703
F++LC+P+EH+ +SRC+ +LR+ GSC+ +V V D + WR
Sbjct: 2650 FSVLCLPEEHHCDLSRCTCMLRSFGSCTDGNCDEV*RVV*DFFEPWR 2790
Score = 35.0 bits (70), Expect(3) = 2e-028
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2 / +1
Query: 56 MASYLEIQSICPHPITKNGND* 121
MA++L+I +C H IT+NGND*
Sbjct: 2143 MATHLKI*GVCTHTITQNGND* 2208
>emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE9 protein (At5g21150 gene)
Length = 2897
Score = 443 bits (961), Expect = e-123
Identities = 172/261 (65%), Positives = 208/261 (79%)
Frame = +3 / +1
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG R+WPLISKY+A VRTQS KMEMID+LFKP +D+G+ RE L+D
Sbjct: 1909 SPGQSDIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLD 2088
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FY SS RKP+ +IIFRDGVSESQFNQVLNIEL Q+++ACKFLD+ W+PKFT+I+AQKNH
Sbjct: 2089 FYYSSENRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNH 2268
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPD 542
HTKFF PDNVPPGT++D+++CHP+NFDFY+CAHAGMIGTTRPTHYH+L+DEIGF+ D
Sbjct: 2269 HTKFFQSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATD 2448
Query: 543 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXX 722
DLQELVHSLS+VYQRSTTAISVVAP+CYAHLAAAQ+G +K++E+
Sbjct: 2449 DLQELVHSLSHVYQRSTTAISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGT 2628
Query: 723 VPVQELPRLHEKVRSSMFFC* 785
VPV +P+LH V +SMFFC*
Sbjct: 2629 VPVPPMPQLHNNVSTSMFFC* 2691
Score = 214 bits (461), Expect = 5e-054
Identities = 100/260 (38%), Positives = 160/260 (61%)
Frame = -1 / -3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
S +EH + ++Q R R+ +R P+M LR L L+ ++L SCQM V ND
Sbjct: 2691 STEEHGG*NIIVQLRHRWHRDCSRCGDPSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 2512
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
* APLV + +RMH+ L+++ + L++Q++V+ WP S +H+SM +EI+V W+ D
Sbjct: 2511 *DRSGAPLVDMGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2332
Query: 425 VVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTF 246
V+ SW +II SR E+ V++LLGN +L +P +IKK A L L+Q N+++LI+L
Sbjct: 2331 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRL 2152
Query: 245 ANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRD 66
A T+PE ++++ + T V+V Q P+ + +F+ ++ +NHFHF *L A C +F D
Sbjct: 2151 AYTIPENNDVLWFPIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*D 1972
Query: 65 KRPFTRTNNSSNRRYIRMSR 6
+ P + +NSSN YIR++R
Sbjct: 1971 EWPLS*AHNSSN*WYIRLAR 1912
Score = 103 bits (220), Expect(3) = 1e-053
Identities = 52/81 (64%), Positives = 54/81 (66%)
Frame = -2 / -1
Query: 529 PISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFW 350
PISS R W* VGLVVPI+PA A *KSK G Q LS VPGGTLSG KN V FFW
Sbjct: 2435 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2256
Query: 349 AIINVNLGFHFSSRNLQASMI 287
A I VN G H SSRNL A +I
Sbjct: 2255 ATITVNFGCHVSSRNLHACII 2193
Score = 83.1 bits (175), Expect(3) = 4e-027
Identities = 43/109 (39%), Positives = 65/109 (59%)
Frame = +2 / +3
Query: 182 LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEES 361
LL QF E + ++ QG C R SV S + +*+ ++ G+Q+S** + S+V+ D CPEE
Sbjct: 2088 LLLQFRE*ETRAHHYFQGWCKRVSVQSSS*Y*IGSDDAGMQVS**YVASEVYSDSCPEEP 2267
Query: 362 SH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLP 508
H + + *C +RN Q L +L FL + CW+D +Y+AN+LP
Sbjct: 2268 PHKVLPVSRP**CSSRNNH*QPDLSPTQL*FLSLRPCWHDWNYKANTLP 2414
Score = 76.2 bits (160), Expect(3) = 1e-053
Identities = 38/71 (53%), Positives = 41/71 (57%)
Frame = -2 / -1
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFLF EL *K GL SIISI D VRT ALYFE+ GH ELTTA
Sbjct: 2120 SGFLFSEL**KSNKSSLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTTA 1941
Query: 34 ATDGTSECPGD 2
A DG S+ PG+
Sbjct: 1940 AIDGISDWPGE 1908
Score = 71.6 bits (150), Expect(3) = 1e-053
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = -2 / -1
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATT 605
QQKN+E+ T C G TGT+P V PP LE+VSD SS F+ P * GATT
Sbjct: 2690 QQKNMEVETLLCSCGIGGTGTVPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 2511
Query: 604 DMAVVLLW 581
++AVVLLW
Sbjct: 2510 EIAVVLLW 2487
Score = 45.1 bits (92), Expect(3) = 4e-027
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2 / +3
Query: 563 FALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSWR 703
F++ C+P+EH+ +SRC+ +LR+ GSC+ +V V D + WR
Sbjct: 2469 FSVPCLPEEHHCDLSRCTCMLRSFGSCTDGNCDEV*RVV*DFFEPWR 2609
Score = 34.1 bits (68), Expect(3) = 4e-027
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 56 MASYLEIQSICPHPITKNGND* 121
MA++L+I +C H IT+NGND*
Sbjct: 1962 MATHLKI*GMCTHTITQNGND* 2027
>emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS63ZA02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 838
Score = 381 bits (826), Expect = e-104
Identities = 149/206 (72%), Positives = 171/206 (83%)
Frame = +3 / +2
Query: 168 ECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLII 347
E L+DFYTSS KRKP+ +IIFRDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++
Sbjct: 2 ELLVDFYTSSNKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLV 181
Query: 348 AQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEI 527
AQKNHHTKFF P P+NVPPGT++DNK+CHPKN DFY+CAHAGMIGTTRPTHYH+L+DEI
Sbjct: 182 AQKNHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEI 361
Query: 528 GFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXX 707
GFS D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 362 GFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGI 541
Query: 708 XXXXXVPVQELPRLHEKVRSSMFFC* 785
+ V +LPRL + V +SMFFC*
Sbjct: 542 TAPGPISVAQLPRLKDNVANSMFFC* 619
Score = 178 bits (384), Expect = 2e-043
Identities = 96/165 (58%), Positives = 105/165 (63%)
Frame = -2 / -2
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 615 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 436
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLL 422
MA+VLLWY S KPISS R W**VG VVPIIPA A *KS FFG LL
Sbjct: 435 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 256
Query: 421 STTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMI 287
S VPGGT SG G KNLV**FF A N GF F+S++LQASMI
Sbjct: 255 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI 121
Score = 168 bits (362), Expect = 2e-040
Identities = 78/172 (45%), Positives = 113/172 (65%)
Frame = -1 / -1
Query: 683 LRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVV 504
LR + +L+E LSSCQ+ +AD N+ G A LVHI ER+ + L+ + + LI+QDVV
Sbjct: 517 LRLIFKLHERPKLSSCQVSIADRRNNRNGTGASLVHIGERVDKFLKFVS*KTNLIIQDVV 338
Query: 503 VSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGI 324
VSW S +HSS+ T VEI VLW+ FVV+ W +I E+ +MILL + Q+EL +
Sbjct: 337 VSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWV 158
Query: 323 PFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTL 168
P + + ASLDDL++ N+Q+LI+L F +T+PE +++ SL R GVE+ Q L
Sbjct: 157 PICV*ELASLDDLIKFNIQNLIELRFTHTIPENYDMLWFSLIRAGVEIYQQL 2
Score = 89.0 bits (188), Expect(2) = 1e-022
Identities = 45/102 (44%), Positives = 52/102 (50%)
Frame = -3 / -3
Query: 699 HDWRTSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSH 520
H S T +T *T Q EQLP SR Q+ W C FGTH+RA+ P Q + SH
Sbjct: 533 HGLMMSQTDLQTS*TSQAEQLPSEHSRSAQQQKWHWCFFGTHRRASGQVPEVRQLKNQSH 354
Query: 519 HAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHY 394
H G GSEL * +SFQ H RN SL CC L H+
Sbjct: 353 HTGRGSELGG*FQSFQREHRGRNHCSLGDIFCCQ*LSLEEHF 228
Score = 78.0 bits (164), Expect(2) = 2e-025
Identities = 46/120 (38%), Positives = 69/120 (57%)
Frame = +2 / +1
Query: 167 GVSD*LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDY 346
GV+ LHQ EK ++ QG C S+ SG+E+* ++HRGLQ ++E +V
Sbjct: 1 GVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGLQALRRKLEPKVPFVG 180
Query: 347 CPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**D 526
+ESS+ + + + C +R+ QQ++ KE FL +C+ WND +Y NSLP P **D
Sbjct: 181 GSKESSYQVLPANVS*KCSSRDNH*QQNMSPKEQ*FLPLCSRWNDWNYPPNSLPRPV**D 360
Score = 60.6 bits (126), Expect(2) = 2e-025
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 566 ALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSW 700
ALLCVPK+H H C+ LL + GSCS W VH+V V D+++ W
Sbjct: 400 ALLCVPKKHQCHFCCCADLLCSLGSCSAWDVHEV*RSV*DIIKPW 534
Score = 40.0 bits (81), Expect(2) = 1e-022
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = -3 / -3
Query: 363 DDSSGQ*ST*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCR 184
DDS + T S CKPR* Q S PD* + H P* * FS +WCR
Sbjct: 197 DDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*KL*YALVFSYSSWCR 18
Query: 183 S 181
+
Sbjct: 17 N 15
>ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 mRNA, complete cds
Length = 2637
Score = 294 bits (637), Expect(3) = 2e-096
Identities = 120/177 (67%), Positives = 141/177 (79%)
Frame = +3 / +1
Query: 141 EAEDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEK 320
E D+G++ E ++FY +S RKP Q+IIFRDGVSESQF QVL IE+ QII+A + L E
Sbjct: 2029 EKGDNGIMNELFVEFYRTSRARKPKQIIIFRDGVSESQFEQVLKIEVDQIIKAYQRLGES 2208
Query: 321 WNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPT 500
PKFT+I+AQKNHHTK F P+NVP GTVVD K+ HP N+DFYMCAHAG IGT+RP
Sbjct: 2209 DVPKFTVIVAQKNHHTKLFQAKGPENVPAGTVVDTKIVHPTNYDFYMCAHAGKIGTSRPA 2388
Query: 501 HYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 671
HYH+L DEIGFSPDDLQ L+HSLSYV QRSTTA S+VAP+ YAHLAAAQV QF KF+
Sbjct: 2389 HYHVLLDEIGFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQVAQFTKFE 2559
Score = 113 bits (242), Expect(3) = 2e-038
Identities = 66/178 (37%), Positives = 97/178 (54%)
Frame = -1 / -1
Query: 683 LRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVV 504
LR+ +L EL NLS C+M V+ S+D CA LV I ERM ++LQ+I E LI +V
Sbjct: 2571 LRYTFKLCELRNLSCCKMSVSYWSHDRSCSCATLVDIGERMDEILQVIGGETNLIK*YMV 2392
Query: 503 VSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGI 324
+S S S M THV+I V + D VH SS +I ++ V++LL +N E
Sbjct: 2391 MSRS*SSYFSCMSTHVKIVVCRVYDLGVHDSSCRNIFRTLSLKQLGVVVLLSHNDSEFWH 2212
Query: 323 PFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTII 150
K L +L+ ++Q L++L F +T+PE DNL+R P +E+ + T+I
Sbjct: 2211 IRFTKTLIRLYNLVHFDLQDLLEL*FTHTIPENDNLLRFPCPACPIELYK*FVHDTVI 2038
Score = 64.3 bits (134), Expect(3) = 2e-096
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +3 / +1
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDG 158
PG + WPLIS+YRA+VRTQSP++EMIDSLF+P E + G
Sbjct: 1885 PGRADVPSVAAVVGSKCWPLISRYRAAVRTQSPRLEMIDSLFQPIENTEKG 2037
Score = 54.2 bits (112), Expect(3) = 2e-038
Identities = 27/44 (61%), Positives = 30/44 (68%)
Frame = -2 / -2
Query: 136 GLNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDGTSECPG 5
G +ESIIS GD V T ALY EI+G E TTAAT+GTS PG
Sbjct: 2015 GWKSESIISRRGD*VLTAALYLEIKGQHFEPTTAATEGTSARPG 1884
Score = 36.3 bits (73), Expect(3) = 2e-096
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 729 VQELPRLHEKVRSSMFFC* 785
V ELPRLHE V +MFFC*
Sbjct: 2581 VPELPRLHENVEGNMFFC* 2637
Score = 32.7 bits (65), Expect(3) = 2e-038
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 784 QQKNIELLTFSCRRGSSWT 728
QQKN+ TFSCRRGSS T
Sbjct: 2636 QQKNMLPSTFSCRRGSSGT 2580
>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
sequence
Length = 99345
Score = 81.3 bits (171), Expect(8) = 1e-094
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3 / -2
Query: 294 EACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPG 410
+ACK LD WNPKF L++AQKNHHTKFF P P+NVPPG
Sbjct: 37115 QACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPG 36999
Score = 77.6 bits (163), Expect(8) = 1e-094
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3 / -1
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYVY 581
GTTRPTHYH+L+DEIGFS D+LQELVHSLSYVY
Sbjct: 36762 GTTRPTHYHVLYDEIGFSADELQELVHSLSYVY 36664
Score = 71.2 bits (149), Expect(8) = 1e-094
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +3 / -2
Query: 609 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 785
VAPICYAHLAAAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 36446 VAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 36270
Score = 68.0 bits (142), Expect(8) = 1e-094
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3 / -1
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIR 167
REWPLISKYRASVRTQ K EMI+SL K EDDG+I+
Sbjct: 37617 REWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIK 37501
Score = 62.5 bits (130), Expect(8) = 1e-094
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +3 / -3
Query: 408 GTVVDNKVCHPKNFDFYMCAHAGMI 482
GT++DNK+CHPKN DFY+CAHAGMI
Sbjct: 36922 GTIIDNKICHPKNNDFYLCAHAGMI 36848
Score = 57.4 bits (119), Expect(9) = 9e-047
Identities = 31/58 (53%), Positives = 35/58 (60%)
Frame = -2 / +1
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGAT 608
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GAT
Sbjct: 36274 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGAT 36447
Score = 51.0 bits (105), Expect(9) = 9e-047
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 409 PGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQA 296
PGGT SG G KNLV**FF A N GF F+S++LQA
Sbjct: 37000 PGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQA 37113
Score = 49.2 bits (101), Expect(8) = 1e-094
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3 / -2
Query: 231 RDGVSESQFNQVLNIELQQIIE 296
RDGVSESQFNQVLNIEL QIIE
Sbjct: 37259 RDGVSESQFNQVLNIELDQIIE 37194
Score = 47.3 bits (97), Expect(8) = 1e-094
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +3 / -2
Query: 165 RECLIDFYTSSGKRKPDQVIIFRDGVSE 248
RE L+DFYTSS KRKP+ +IIFR SE
Sbjct: 37409 RELLVDFYTSSNKRKPEHIIIFRYVTSE 37326
Score = 36.8 bits (74), Expect(9) = 9e-047
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = -1 / +3
Query: 305 FASLDDLLQLNVQHLIKLTFANTVP 231
F LDDL++ N+Q+LI+L F +T+P
Sbjct: 37185 FNYLDDLIKFNIQNLIELRFTHTIP 37259
Score = 36.8 bits (74), Expect(9) = 9e-047
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 581 VHIRERMHQLLQIIRTEAYLIMQDVVVSWPRS 486
+HI ER+ + L+ + + LI+QDVVVSW S
Sbjct: 36664 IHIGERVDKFLKFVS*KTNLIIQDVVVSWAGS 36759
Score = 33.6 bits (67), Expect(9) = 9e-047
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1 / +1
Query: 164 DQTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSS 33
D I+FS +L + +NH L +RCS+F + P RT++ S
Sbjct: 37504 DNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTHHLS 37635
Score = 32.2 bits (64), Expect(9) = 9e-047
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1 / +2
Query: 482 DHSSMRTHVEIEVLWMADFVVH 417
+HSS+ T VEI VLW+ FVV+
Sbjct: 36848 NHSSVSTEVEIIVLWVTYFVVN 36913
Score = 31.8 bits (63), Expect(9) = 9e-047
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / +3
Query: 40 TAATDGTSECPGD 2
TAA DGTS+CPGD
Sbjct: 37722 TAAMDGTSDCPGD 37760
Score = 26.7 bits (52), Expect(9) = 9e-047
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1 / +3
Query: 236 VPEYDNLVRLSLPRTGVEVNQTLP 165
+PE +++ SL R GVE+ Q LP
Sbjct: 37338 IPENYDMLWFSLIRAGVEIYQQLP 37409
Score = 24.4 bits (47), Expect(9) = 9e-047
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 607 TDMAVVLLWY 578
T+MA+VLLWY
Sbjct: 36538 TEMALVLLWY 36567
Score = 22.6 bits (43), Expect(8) = 1e-094
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 579 YQRSTTAISV 608
YQRST+AISV
Sbjct: 36566 YQRSTSAISV 36537
>ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 mRNA, complete cds
Length = 2553
Score = 233 bits (503), Expect(2) = 5e-092
Identities = 92/145 (63%), Positives = 108/145 (74%)
Frame = +3 / +1
Query: 351 QKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIG 530
Q NHHTKFF P+NV PGT++D+ +CH N DFY+CAHAG IGTTRPTHYH+L+DEIG
Sbjct: 2119 QINHHTKFFQTESPNNVLPGTIIDSNICHQHNNDFYLCAHAGKIGTTRPTHYHVLYDEIG 2298
Query: 531 FSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXX 710
F D LQELVHSLSYVYQRSTTAIS+VAPICYAHLAAAQ+ +KF++M
Sbjct: 2299 FDTDQLQELVHSLSYVYQRSTTAISLVAPICYAHLAAAQMATAMKFEDMSETSSSHGGIT 2478
Query: 711 XXXXVPVQELPRLHEKVRSSMFFC* 785
VPV +P+L+ V SSMFFC*
Sbjct: 2479 TAGAVPVPPMPKLNTNVASSMFFC* 2553
Score = 127 bits (273), Expect(2) = 5e-092
Identities = 56/82 (68%), Positives = 66/82 (80%)
Frame = +3 / +1
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLIDFYTSSGKRKPDQVIIF 230
REWPLISKYRA VRTQSPK+EMIDSLFKP +DD I L+ + SS +KP+ +IIF
Sbjct: 1876 REWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDDQGIMRELLLDFHSSSGKKPNHIIIF 2055
Query: 231 RDGVSESQFNQVLNIELQQIIE 296
RDGVSESQFNQVLNIEL Q+++
Sbjct: 2056 RDGVSESQFNQVLNIELDQMMQ 2121
Score = 95.0 bits (201), Expect(3) = 6e-038
Identities = 51/145 (35%), Positives = 82/145 (56%)
Frame = -1 / -1
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND 606
SAKEH + +Q R R+ + PA+ LRH+++L+ +L S QM + N
Sbjct: 2553 SAKEH*TSNVGVQLRHGRHRDCSSCGDPAVAR*SLRHVLKLHCSCHLCSRQMSITYRRNK 2374
Query: 605 *YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADF 426
G CAPLV I MH+ L++I ++ L+++ +V+ WP S + SSM T +EI V+ + D
Sbjct: 2373 RDGSCAPLVDIG**MHKFLELICVKSNLVVEHMVMCWPCSSNLSSMSTKIEIVVVLVTDV 2194
Query: 425 VVHHSSWWDIIWLSRNEKFSVMILL 351
V++ SW +II E+ V++ L
Sbjct: 2193 AVNYCSWKNIIRAFGLEELRVVVYL 2119
Score = 62.0 bits (129), Expect(3) = 6e-038
Identities = 28/38 (73%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 136 GLNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDG 23
GL SIIS GD VRT ALYFEI GHS ELTTAA DG
Sbjct: 1961 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTAAMDG 1848
Score = 41.8 bits (85), Expect(3) = 6e-038
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = -1 / -1
Query: 296 LDDLLQLNVQHLIKLTFANTVPEYDNLVR 210
L L+Q N+++L+KL F +T+PE DN++R
Sbjct: 2121 LHHLIQFNIKNLVKLRFTDTIPENDNVIR 2035
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
Length = 96102
Score = 71.6 bits (150), Expect(8) = 8e-081
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +3 / -1
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYV 578
GTTRPTHYH+L+DEIGF D LQELVHSLSYV
Sbjct: 84063 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 83968
Score = 71.6 bits (150), Expect(8) = 8e-081
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +3 / -3
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFKPREAEDD 155
REWPLISKYRA VRTQSPK+EMIDSLFKP +DD
Sbjct: 84937 REWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 84833
Score = 70.3 bits (147), Expect(8) = 8e-081
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +3 / -1
Query: 609 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 785
VAPICYAHLAAAQ+ +KF++M VPV +P+L+ V SSMFFC*
Sbjct: 83760 VAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVPPMPKLNTNVASSMFFC* 83584
Score = 69.3 bits (145), Expect(8) = 8e-081
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +3 / -3
Query: 297 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPG 410
ACKFLD+K +PKFTLIIAQ NHHTKFF P+NV PG
Sbjct: 84418 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPG 84305
Score = 55.1 bits (114), Expect(5) = 2e-022
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -2 / +2
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFM 659
QQKNIEL T G TGT PA V PP L++VSD+SSNF+
Sbjct: 83585 QQKNIELATLVFSFGMGGTGTAPAVVIPPWLDEVSDMSSNFI 83710
Score = 54.7 bits (113), Expect(8) = 8e-081
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +3 / -3
Query: 399 VPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYH 509
+P GT++D+ +CH N DFY+CAHAG I + + +Y+
Sbjct: 84229 LPAGTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 84119
Score = 54.2 bits (112), Expect(5) = 2e-022
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = -2 / +3
Query: 136 GLNNESIISIFGDWVRTDALYFEIRGHSRELTTAA 32
GL SIIS GD VRT ALYFEI GHS ELTT A
Sbjct: 84852 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 84956
Score = 45.1 bits (92), Expect(8) = 8e-081
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3 / -3
Query: 231 RDGVSESQFNQVLNIELQQIIE 296
RDGVSESQFNQVLNIEL Q+++
Sbjct: 84580 RDGVSESQFNQVLNIELDQMMQ 84515
Score = 40.5 bits (82), Expect(5) = 2e-022
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2 / +3
Query: 433 QTLLSTTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQA 296
Q + +PG TL G KN V F A+I+VNLG +F S+NL A
Sbjct: 84282 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 84419
Score = 33.1 bits (66), Expect(5) = 2e-022
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3 / +1
Query: 483 RSFQHAHTCRNRSSLDGRLCCPPQFL 406
+SFQH H RNR + R CC FL
Sbjct: 84145 QSFQHEHKDRNRCCVGDRCCCQLLFL 84222
Score = 29.9 bits (59), Expect(5) = 2e-022
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 581 VHIRERMHQLLQIIRTEAYLIMQDVVVSWPRS 486
+HI MH+ L++I ++ L+++ +V+ WP S
Sbjct: 83965 LHIG**MHKFLELICVKSNLVVEHMVMCWPCS 84060
Score = 26.3 bits (51), Expect(8) = 8e-081
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 165 RECLIDFYTSSGKR 206
RE L+DF++SSGK+
Sbjct: 84720 RELLLDFHSSSGKK 84679
Score = 23.1 bits (44), Expect(8) = 8e-081
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / -3
Query: 579 YQRSTTAISV 608
YQRSTTAIS+
Sbjct: 83866 YQRSTTAISL 83837
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
V, complete sequence
Length = 84413
Score = 82.2 bits (173), Expect(7) = 3e-079
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +3 / -2
Query: 297 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTV 416
ACKFLD+ W+PKFT+I+AQKNHHTKFF PDNVPPG +
Sbjct: 12766 ACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 12647
Score = 79.0 bits (166), Expect(7) = 3e-079
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +3 / -3
Query: 555 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQ 734
L H + Y+ + + + VAP+CYAHLAAAQ+G +K++E+ VPV
Sbjct: 12138 LQHYVQYLNSQVSLCLFAVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVP 11959
Query: 735 ELPRLHEKVRSSMFFC* 785
+P+LH V +SMFFC*
Sbjct: 11958 PMPQLHNNVSTSMFFC* 11908
Score = 74.8 bits (157), Expect(7) = 3e-079
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +3 / -2
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYV 578
GTTRPTHYH+L+DEIGF+ DDLQELVHSLSYV
Sbjct: 12403 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 12308
Score = 71.6 bits (150), Expect(8) = 8e-081
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +3 / +3
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYV 578
GTTRPTHYH+L+DEIGF D LQELVHSLSYV
Sbjct: 69651 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 69746
Score = 71.6 bits (150), Expect(8) = 8e-081
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +3 / +2
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFKPREAEDD 155
REWPLISKYRA VRTQSPK+EMIDSLFKP +DD
Sbjct: 68777 REWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 68881
Score = 70.3 bits (147), Expect(7) = 3e-079
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3 / -1
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIR 167
R+WPLISKY+A VRTQS KMEMID+LFKP +D+G+ R
Sbjct: 13337 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 13221
Score = 70.3 bits (147), Expect(8) = 8e-081
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +3 / +3
Query: 609 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 785
VAPICYAHLAAAQ+ +KF++M VPV +P+L+ V SSMFFC*
Sbjct: 69954 VAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVPPMPKLNTNVASSMFFC* 70130
Score = 69.3 bits (145), Expect(8) = 8e-081
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 297 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPG 410
ACKFLD+K +PKFTLIIAQ NHHTKFF P+NV PG
Sbjct: 69296 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPG 69409
Score = 64.3 bits (134), Expect(7) = 3e-079
Identities = 19/28 (67%), Positives = 27/28 (96%)
Frame = +3 / -3
Query: 399 VPPGTVVDNKVCHPKNFDFYMCAHAGMI 482
+P GT++D+++CHP+NFDFY+CAHAGMI
Sbjct: 12579 LPAGTIIDSQICHPRNFDFYLCAHAGMI 12496
Score = 56.1 bits (116), Expect(5) = 8e-026
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = -2 / +3
Query: 412 VPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQA 296
+PGGTLSG KN V FFWA I VN G H SSRNL A
Sbjct: 12651 LPGGTLSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHA 12767
Score = 55.1 bits (114), Expect(5) = 1e-022
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -2 / -2
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFM 659
QQKNIEL T G TGT PA V PP L++VSD+SSNF+
Sbjct: 70129 QQKNIELATLVFSFGMGGTGTAPAVVIPPWLDEVSDMSSNFI 70004
Score = 54.7 bits (113), Expect(8) = 8e-081
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 399 VPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYH 509
+P GT++D+ +CH N DFY+CAHAG I + + +Y+
Sbjct: 69485 LPAGTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 69595
Score = 54.2 bits (112), Expect(5) = 1e-022
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = -2 / -3
Query: 136 GLNNESIISIFGDWVRTDALYFEIRGHSRELTTAA 32
GL SIIS GD VRT ALYFEI GHS ELTT A
Sbjct: 68862 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 68758
Score = 53.3 bits (110), Expect(5) = 8e-026
Identities = 28/61 (45%), Positives = 33/61 (54%)
Frame = -2 / +2
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATT 605
QQKN+E+ T C G TGT P V PP LE+VSD SS F+ P * GAT
Sbjct: 11909 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATA 12088
Query: 604 D 602
+
Sbjct: 12089 N 12091
Score = 47.8 bits (98), Expect(5) = 8e-026
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2 / +1
Query: 136 GLNNESIISIFGDWVRTDALYFEIRGHSRELTT 38
GL SIISI D VRT ALYFE+ GH ELTT
Sbjct: 13252 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 13350
Score = 45.1 bits (92), Expect(7) = 3e-079
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3 / -3
Query: 231 RDGVSESQFNQVLNIELQQIIE 296
RDGVSESQFNQVLNIEL Q+++
Sbjct: 12945 RDGVSESQFNQVLNIELDQMMQ 12880
Score = 45.1 bits (92), Expect(8) = 8e-081
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3 / +2
Query: 231 RDGVSESQFNQVLNIELQQIIE 296
RDGVSESQFNQVLNIEL Q+++
Sbjct: 69134 RDGVSESQFNQVLNIELDQMMQ 69199
Score = 40.5 bits (82), Expect(5) = 1e-022
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2 / -3
Query: 433 QTLLSTTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQA 296
Q + +PG TL G KN V F A+I+VNLG +F S+NL A
Sbjct: 69432 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 69295
Score = 39.1 bits (79), Expect(7) = 3e-079
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3 / -2
Query: 165 RECLIDFYTSSGKRKPDQVIIFR 233
RE L+DFY SS RKP+ +IIFR
Sbjct: 13090 RELLLDFYYSSENRKPEHIIIFR 13022
Score = 37.3 bits (75), Expect(5) = 8e-026
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = -1 / +2
Query: 581 VHIRERMHQLLQIIRTEAYLIMQDVVVSWPRS 486
+HI +RMH+ L+++ + L++Q++V+ WP S
Sbjct: 12305 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCS 12400
Score = 33.1 bits (66), Expect(5) = 1e-022
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 483 RSFQHAHTCRNRSSLDGRLCCPPQFL 406
+SFQH H RNR + R CC FL
Sbjct: 69569 QSFQHEHKDRNRCCVGDRCCCQLLFL 69492
Score = 29.9 bits (59), Expect(5) = 1e-022
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1 / -1
Query: 581 VHIRERMHQLLQIIRTEAYLIMQDVVVSWPRS 486
+HI MH+ L++I ++ L+++ +V+ WP S
Sbjct: 69749 LHIG**MHKFLELICVKSNLVVEHMVMCWPCS 69654
Score = 29.5 bits (58), Expect(5) = 8e-026
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1 / +1
Query: 482 DHSSMRTHVEIEVLWMADFVVHHSS 408
+H+SM +EI+V W+ D V+ S
Sbjct: 12496 NHASMGAEIEIKVAWVTDLAVNDCS 12570
Score = 26.3 bits (51), Expect(8) = 8e-081
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 165 RECLIDFYTSSGKR 206
RE L+DF++SSGK+
Sbjct: 68994 RELLLDFHSSSGKK 69035
Score = 23.1 bits (44), Expect(8) = 8e-081
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 579 YQRSTTAISV 608
YQRSTTAIS+
Sbjct: 69848 YQRSTTAISL 69877
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete
sequence
Length = 112600
Score = 82.2 bits (173), Expect(7) = 2e-078
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +3 / -3
Query: 297 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTV 416
ACKFLD+ W+PKFT+I+AQKNHHTKFF PDNVPPG +
Sbjct: 77681 ACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 77562
Score = 79.0 bits (166), Expect(7) = 2e-078
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +3 / -1
Query: 555 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQ 734
L H + Y+ + + + VAP+CYAHLAAAQ+G +K++E+ VPV
Sbjct: 77053 LQHYVQYLNSQVSLCLFAVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVP 76874
Query: 735 ELPRLHEKVRSSMFFC* 785
+P+LH V +SMFFC*
Sbjct: 76873 PMPQLHNNVSTSMFFC* 76823
Score = 74.8 bits (157), Expect(7) = 2e-078
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +3 / -3
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYV 578
GTTRPTHYH+L+DEIGF+ DDLQELVHSLSYV
Sbjct: 77318 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 77223
Score = 70.3 bits (147), Expect(7) = 2e-078
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3 / -2
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIR 167
R+WPLISKY+A VRTQS KMEMID+LFKP +D+G+ R
Sbjct: 78252 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 78136
Score = 64.3 bits (134), Expect(7) = 2e-078
Identities = 19/28 (67%), Positives = 27/28 (96%)
Frame = +3 / -1
Query: 399 VPPGTVVDNKVCHPKNFDFYMCAHAGMI 482
+P GT++D+++CHP+NFDFY+CAHAGMI
Sbjct: 77494 LPAGTIIDSQICHPRNFDFYLCAHAGMI 77411
Score = 56.1 bits (116), Expect(5) = 2e-025
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = -2 / +1
Query: 412 VPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQA 296
+PGGTLSG KN V FFWA I VN G H SSRNL A
Sbjct: 77566 LPGGTLSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHA 77682
Score = 53.3 bits (110), Expect(5) = 2e-025
Identities = 28/61 (45%), Positives = 33/61 (54%)
Frame = -2 / +3
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATT 605
QQKN+E+ T C G TGT P V PP LE+VSD SS F+ P * GAT
Sbjct: 76824 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATA 77003
Query: 604 D 602
+
Sbjct: 77004 N 77006
Score = 47.8 bits (98), Expect(5) = 2e-025
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2 / +2
Query: 136 GLNNESIISIFGDWVRTDALYFEIRGHSRELTT 38
GL SIISI D VRT ALYFE+ GH ELTT
Sbjct: 78167 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 78265
Score = 45.1 bits (92), Expect(7) = 2e-078
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3 / -1
Query: 231 RDGVSESQFNQVLNIELQQIIE 296
RDGVSESQFNQVLNIEL Q+++
Sbjct: 77860 RDGVSESQFNQVLNIELDQMMQ 77795
Score = 39.1 bits (79), Expect(7) = 2e-078
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3 / -3
Query: 165 RECLIDFYTSSGKRKPDQVIIFR 233
RE L+DFY SS RKP+ +IIFR
Sbjct: 78005 RELLLDFYYSSENRKPEHIIIFR 77937
Score = 37.3 bits (75), Expect(5) = 2e-025
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = -1 / +3
Query: 581 VHIRERMHQLLQIIRTEAYLIMQDVVVSWPRS 486
+HI +RMH+ L+++ + L++Q++V+ WP S
Sbjct: 77220 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCS 77315
Score = 29.5 bits (58), Expect(5) = 2e-025
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1 / +2
Query: 482 DHSSMRTHVEIEVLWMADFVVHHSS 408
+H+SM +EI+V W+ D V+ S
Sbjct: 77411 NHASMGAEIEIKVAWVTDLAVNDCS 77485
>gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB75ZH02 3PRIM, mRNA sequence
Length = 922
Score = 205 bits (443), Expect(3) = 2e-067
Identities = 80/120 (66%), Positives = 96/120 (80%)
Frame = +3 / -1
Query: 105 KMEMIDSLFKPREAEDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQ 284
K +MI SL K ++DG+I+E ++DFYTSS KRKP+ +II DGVSESQ NQVLNIEL
Sbjct: 889 KAKMI*SLVKKNGTKEDGIIQELMVDFYTSSNKRKPEHIIILFDGVSESQLNQVLNIELD 710
Query: 285 QIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMC 464
QIIEA K LD WNPKF L++AQKNHHTKFF P P+NVPPGT++DNK+ HPKN DFY+C
Sbjct: 709 QIIEARKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKIFHPKNNDFYLC 530
Score = 175 bits (376), Expect(2) = 6e-045
Identities = 73/116 (62%), Positives = 85/116 (73%)
Frame = +3 / -3
Query: 438 PKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAP 617
PK F HAGMIGTTRPTHYH+L+DEIG S D+LQELVHSLSYVYQRST+AISVVAP
Sbjct: 557 PKEQ*FLPLCHAGMIGTTRPTHYHVLYDEIGLSADELQELVHSLSYVYQRSTSAISVVAP 378
Query: 618 ICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 785
ICYAHLAAAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 377 ICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 210
Score = 107 bits (229), Expect(2) = 3e-047
Identities = 57/104 (54%), Positives = 64/104 (61%)
Frame = -2 / +1
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 214 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 393
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPA 470
MA+VLLWY S +PISS R W**VG VVPIIPA
Sbjct: 394 MALVLLWYT*ESEWTSS*SSSAERPISSYRTW**VGRVVPIIPA 525
Score = 104 bits (221), Expect(2) = 3e-047
Identities = 49/117 (41%), Positives = 73/117 (62%)
Frame = -1 / +2
Query: 464 THVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDL 285
T VEI VLW+ FVV+ W +I E+ +MILL + Q+EL +P + + ASLDDL
Sbjct: 530 TEVEIIVLWVKYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDL 709
Query: 284 LQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFSFPWLKQ*VNH 114
++ N+Q+LI+L F +T+ E D+++ SL R GVE+ L I FS +L + +NH
Sbjct: 710 IKFNIQNLIELRFTHTIKENDDMLWFSLIRAGVEIYHQLLYNAIFFSSIFLYKGLNH 880
Score = 73.9 bits (155), Expect(2) = 2e-027
Identities = 34/72 (47%), Positives = 48/72 (66%)
Frame = -1 / +3
Query: 683 LRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVV 504
LR + +L+E LSSCQ+ +AD N+ G A LVHI ER+ + L+ + + LI+QDVV
Sbjct: 312 LRLIFKLHERPKLSSCQVSIADRRNNRNGTGASLVHIGERVDKFLKFVS*KTNLIIQDVV 491
Query: 503 VSWPRSPDHSSM 468
VSW S +HSS+
Sbjct: 492 VSWAGSSNHSSV 527
Score = 71.2 bits (149), Expect(2) = 2e-027
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -2 / +3
Query: 457 *KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMI 287
*KS FFG LLS VPGGT SG G KNLV**FF A N GF F+S++L+ASMI
Sbjct: 537 *KSLFFG*NILLSMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLRASMI 707
Score = 60.6 bits (126), Expect(3) = 2e-067
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2 / -2
Query: 566 ALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSW 700
ALLCVPK+H H C+ LL + GSCS W VH+V V D+++ W
Sbjct: 429 ALLCVPKKHQCHFCCCADLLCSLGSCSAWDVHEV*RSV*DIIKPW 295
Score = 31.3 bits (62), Expect(3) = 2e-067
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2 / -2
Query: 473 WNDRDYEANSLPHPA**D 526
WND +Y NSLP P **D
Sbjct: 522 WNDWNYPPNSLPRPV**D 469
Score = 29.0 bits (57), Expect(2) = 6e-045
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1 / -2
Query: 184 STPVLGRESLTKLSYSGTVLAKVSLIRC*TLSCNKSSRLANFLMRNGIPSSR*LLPRRII 363
STP RE+ + S+S V ++ IR * L+ +SSRLA+ + G SS +RII
Sbjct: 810 STPARIRENQSISSFSLMV*VNLNSIRF*ILNLIRSSRLASS*TQIGTQSSFCWWLKRII 631
>gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL49a09F 3', mRNA
sequence
Length = 611
Score = 237 bits (513), Expect = 3e-061
Identities = 92/137 (67%), Positives = 109/137 (79%)
Frame = +3 / -2
Query: 375 FIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQE 554
F P P+NVPPGT++DNK+CHPK DFY+CAHAGMIGTTRPTHYH+L+DEIGFS D+LQE
Sbjct: 610 FQPTSPENVPPGTIIDNKICHPKTNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQE 431
Query: 555 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQ 734
LVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++ + V
Sbjct: 430 LVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVA 251
Query: 735 ELPRLHEKVRSSMFFC* 785
+LPRL + V +SMFFC*
Sbjct: 250 QLPRLKDNVANSMFFC* 200
Score = 139 bits (298), Expect = 1e-031
Identities = 76/136 (55%), Positives = 82/136 (60%)
Frame = -2 / +3
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 204 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 383
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLL 422
MA+VLLWY S KPISS R W**VG VVPIIPA A *KS FG LL
Sbjct: 384 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLVFG*HILL 563
Query: 421 STTVPGGTLSGFPGMK 374
S VPGGT SG G K
Sbjct: 564 SMIVPGGTFSGDVGWK 611
>gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL27f05F 3', mRNA
sequence
Length = 544
Score = 237 bits (511), Expect = 6e-061
Identities = 91/132 (68%), Positives = 108/132 (81%)
Frame = +3 / -3
Query: 390 PDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSL 569
P+NVPPGT++DNK+CHPKN DFY+CAHAGMIGTTRPTHYH+L+DEIGFS D+LQELVHSL
Sbjct: 542 PENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSL 363
Query: 570 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRL 749
SYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++ + V +LPRL
Sbjct: 362 SYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRL 183
Query: 750 HEKVRSSMFFC* 785
+ V +SMFFC*
Sbjct: 182 KDNVANSMFFC* 147
Score = 140 bits (300), Expect = 8e-032
Identities = 75/131 (57%), Positives = 81/131 (61%)
Frame = -2 / +1
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 151 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 330
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLL 422
MA+VLLWY S KPISS R W**VG VVPIIPA A *KS FFG LL
Sbjct: 331 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 510
Query: 421 STTVPGGTLSG 389
S VPGGT SG
Sbjct: 511 SMIVPGGTFSG 543
>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete
sequence
Length = 96801
Score = 74.4 bits (156), Expect(6) = 1e-057
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3 / +2
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAIS 605
GT+RP HYH+L DEIGFSPDDLQ L+HSLSYV S T+I+
Sbjct: 50789 GTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYV*VHSLTSIT 50911
Score = 62.9 bits (131), Expect(6) = 1e-057
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +3 / +2
Query: 57 WPLISKYRASVRTQSPKMEMIDSLFKPREAEDDG 158
WPLIS+YRA+VRTQSP++EMIDSLF+P E + G
Sbjct: 49904 WPLISRYRAAVRTQSPRLEMIDSLFQPIENTEKG 50005
Score = 54.7 bits (113), Expect(6) = 1e-057
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3 / +1
Query: 408 GTVVDNKVCHPKNFDFYMCAHAGMI 482
GTVVD K+ HP N+DFYMCAHAG I
Sbjct: 50629 GTVVDTKIVHPTNYDFYMCAHAGKI 50703
Score = 52.8 bits (109), Expect(6) = 1e-057
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 294 EACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPG 410
+A + L E PKFT+I+AQKNHHTK F P+NVP G
Sbjct: 50424 QAYQRLGESDVPKFTVIVAQKNHHTKLFQAKGPENVPAG 50540
Score = 40.5 bits (82), Expect(6) = 1e-057
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 231 RDGVSESQFNQVLNIELQQIIE 296
RDGVSESQF QVL IE+ QII+
Sbjct: 50259 RDGVSESQFEQVLKIEVDQIIK 50324
Score = 33.1 bits (66), Expect(6) = 1e-057
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3 / +1
Query: 168 ECLIDFYTSSGKRKPDQVIIFR 233
E ++FY +S RKP Q+IIFR
Sbjct: 50107 ELFVEFYRTSRARKPKQIIIFR 50172
>ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G27880 mRNA, complete cds
Length = 2994
Score = 145 bits (311), Expect(3) = 7e-056
Identities = 56/133 (42%), Positives = 80/133 (60%)
Frame = +3 / +1
Query: 387 KPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
K N+ PGTVVD K+CHP FDFY+ +HAG+ GT+RP HYH+L DE GF+ D LQ L ++
Sbjct: 2596 KSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNN 2775
Query: 567 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPR 746
L Y Y R T ++S+V P YAHLAA + +++ + + +LP
Sbjct: 2776 LCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPA 2955
Query: 747 LHEKVRSSMFFC* 785
+ + V+ MF+C*
Sbjct: 2956 IKDNVKEVMFYC* 2994
Score = 72.5 bits (152), Expect(3) = 7e-056
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +3 / +1
Query: 210 PDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
P ++I +RDGVSE QF+QVL E+ I +AC L E + P+ T +I QK HHT+ F
Sbjct: 2395 PQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 2562
Score = 41.4 bits (84), Expect(3) = 7e-056
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +3 / +1
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLIDF 185
PG +WP I+KYR V Q+ + E+I L+K + GL+ LI
Sbjct: 2179 PGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIRE 2358
Query: 186 YTSSGKRKPDQV 221
+ + +R Q+
Sbjct: 2359 HFIAFRRATGQI 2394
>emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL43ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1092
Score = 145 bits (311), Expect(3) = 3e-054
Identities = 56/133 (42%), Positives = 80/133 (60%)
Frame = +3 / +2
Query: 387 KPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
K N+ PGTVVD K+CHP FDFY+ +HAG+ GT+RP HYH+L DE GF+ D LQ L ++
Sbjct: 512 KSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNN 691
Query: 567 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPR 746
L Y Y R T ++S+V P YAHLAA + +++ + + +LP
Sbjct: 692 LCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPA 871
Query: 747 LHEKVRSSMFFC* 785
+ + V+ MF+C*
Sbjct: 872 IKDNVKEVMFYC* 910
Score = 72.5 bits (152), Expect(3) = 3e-054
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +3 / +2
Query: 210 PDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
P ++I +RDGVSE QF+QVL E+ I +AC L E + P+ T +I QK HHT+ F
Sbjct: 311 PQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 478
Score = 35.9 bits (72), Expect(3) = 3e-054
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3 / +3
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFK 134
PG +WP I+KYR V Q+ + E+I L+K
Sbjct: 96 PGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYK 224
>ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.2 mRNA, complete cds
Length = 3489
Score = 132 bits (282), Expect(3) = 2e-050
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 2877 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3056
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 3057 TYARCTRSVSIVPPAYYAHLAA 3122
Score = 71.6 bits (150), Expect(3) = 2e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3 / +3
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 353
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 2631 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2810
Query: 354 KNHHTKFFIPGKPD 395
K HHT+ F D
Sbjct: 2811 KRHHTRLFAQNHND 2852
Score = 37.3 bits (75), Expect(3) = 2e-050
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3 / +3
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLI 164
PG ++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 2451 PGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 2609
>ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.1 mRNA, complete cds
Length = 3483
Score = 132 bits (282), Expect(3) = 2e-050
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 2871 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3050
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 3051 TYARCTRSVSIVPPAYYAHLAA 3116
Score = 71.6 bits (150), Expect(3) = 2e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3 / +3
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 353
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 2625 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2804
Query: 354 KNHHTKFFIPGKPD 395
K HHT+ F D
Sbjct: 2805 KRHHTRLFAQNHND 2846
Score = 37.3 bits (75), Expect(3) = 2e-050
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3 / +3
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLI 164
PG ++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 2445 PGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 2603
>gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein (AGO1) mRNA, complete cds
Length = 3473
Score = 132 bits (282), Expect(3) = 2e-050
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 2848 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3027
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 3028 TYARCTRSVSIVPPAYYAHLAA 3093
Score = 71.6 bits (150), Expect(3) = 2e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3 / +1
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 353
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 2602 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2781
Query: 354 KNHHTKFFIPGKPD 395
K HHT+ F D
Sbjct: 2782 KRHHTRLFAQNHND 2823
Score = 37.3 bits (75), Expect(3) = 2e-050
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3 / +1
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLI 164
PG ++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 2422 PGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 2580
>gb|BT000941.1| Arabidopsis thaliana clone C105223 putative leaf development protein
Argonaute (At1g48410) mRNA, complete cds
Length = 3177
Score = 132 bits (282), Expect(3) = 2e-050
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 2722 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2901
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 2902 TYARCTRSVSIVPPAYYAHLAA 2967
Score = 71.6 bits (150), Expect(3) = 2e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3 / +1
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 353
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 2476 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2655
Query: 354 KNHHTKFFIPGKPD 395
K HHT+ F D
Sbjct: 2656 KRHHTRLFAQNHND 2697
Score = 37.3 bits (75), Expect(3) = 2e-050
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3 / +1
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLI 164
PG ++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 2296 PGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 2454
>gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence
Length = 2764
Score = 132 bits (282), Expect(3) = 2e-050
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +2
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 2120 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2299
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 2300 TYARCTRSVSIVPPAYYAHLAA 2365
Score = 71.6 bits (150), Expect(3) = 2e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3 / +2
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 353
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 1874 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2053
Query: 354 KNHHTKFFIPGKPD 395
K HHT+ F D
Sbjct: 2054 KRHHTRLFAQNHND 2095
Score = 37.3 bits (75), Expect(3) = 2e-050
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3 / +2
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLI 164
PG ++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 1694 PGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 1852
>ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G43810 (ZLL) mRNA, complete cds
Length = 3330
Score = 132 bits (282), Expect(3) = 1e-048
Identities = 49/95 (51%), Positives = 65/95 (68%)
Frame = +3 / +3
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H + N+ PGTVVD K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 2658 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2837
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2838 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2942
Score = 72.1 bits (151), Expect(3) = 1e-048
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3 / +3
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 2481 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2654
Score = 30.9 bits (61), Expect(3) = 1e-048
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3 / +3
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFK 134
++WP ++KY V Q+ + E+I L+K
Sbjct: 2316 QDWPEVTKYAGLVCAQAHRQELIQDLYK 2399
>emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwille protein
Length = 3323
Score = 132 bits (282), Expect(3) = 1e-048
Identities = 49/95 (51%), Positives = 65/95 (68%)
Frame = +3 / +3
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H + N+ PGTVVD K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 2658 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2837
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2838 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2942
Score = 72.1 bits (151), Expect(3) = 1e-048
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3 / +3
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 2481 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2654
Score = 30.9 bits (61), Expect(3) = 1e-048
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3 / +3
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFK 134
++WP ++KY V Q+ + E+I L+K
Sbjct: 2316 QDWPEVTKYAGLVCAQAHRQELIQDLYK 2399
>emb|AX505737.1| Sequence 432 from Patent WO0216655
Length = 2967
Score = 132 bits (282), Expect(3) = 1e-048
Identities = 49/95 (51%), Positives = 65/95 (68%)
Frame = +3 / +1
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H + N+ PGTVVD K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 2530 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2709
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2710 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2814
Score = 72.1 bits (151), Expect(3) = 1e-048
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3 / +1
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 2353 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2526
Score = 30.9 bits (61), Expect(3) = 1e-048
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3 / +1
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFK 134
++WP ++KY V Q+ + E+I L+K
Sbjct: 2188 QDWPEVTKYAGLVCAQAHRQELIQDLYK 2271
>emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS34ZG07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3188
Score = 132 bits (282), Expect(4) = 1e-046
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 2598 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2777
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 2778 TYARCTRSVSIVPPAYYAHLAA 2843
Score = 45.1 bits (92), Expect(4) = 1e-046
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3 / +2
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 302
L+ + S KP ++I +RDGVSE QF QVL EL I +AC
Sbjct: 2351 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKAC 2479
Score = 38.2 bits (77), Expect(4) = 1e-046
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3 / +2
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLI 164
PG ++WP I+KY V Q+ + E+I LFK + GL+
Sbjct: 2171 PGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGLL 2329
Score = 30.9 bits (61), Expect(4) = 1e-046
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3 / +1
Query: 309 LDEKWNPKFTLIIAQKNHHTKFFIPGKPD 395
L+ + P T ++ QK HHT+ F D
Sbjct: 2485 LEAGYQPPVTFVVVQKRHHTRLFAQNHND 2571
>gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL43g03F 3', mRNA
sequence
Length = 484
Score = 181 bits (390), Expect = 3e-044
Identities = 73/109 (66%), Positives = 86/109 (78%)
Frame = +3 / -1
Query: 459 MCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLA 638
+CAHAGMIGTTRPTHYH+L+DEIGFS D+LQELVHSLSYVYQRST+AISVVAPICYAHLA
Sbjct: 484 LCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLA 305
Query: 639 AAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 785
AAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 304 AAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 158
Score = 109 bits (232), Expect = 2e-022
Identities = 58/104 (55%), Positives = 64/104 (61%)
Frame = -2 / +3
Query: 781 QKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTD 602
QKN+EL T S GS T P V PP L+DVSD SSNFMN P+ *Q+GATT+
Sbjct: 162 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 341
Query: 601 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPA 470
MA+VLLWY S KPISS R W**VG VVPIIPA
Sbjct: 342 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA 473
>gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P13212
5-PRIME, mRNA sequence
Length = 775
Score = 132 bits (282), Expect(2) = 3e-043
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 204 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 383
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 384 TYARCTRSVSIVPPAYYAHLAA 449
Score = 66.6 bits (139), Expect(2) = 3e-043
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +3 / +3
Query: 219 VIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPD 395
+I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F D
Sbjct: 3 IIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQNHND 179
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 136 bits (291), Expect(3) = 1e-042
Identities = 52/100 (52%), Positives = 70/100 (70%)
Frame = +3 / -2
Query: 342 IIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHD 521
++ +++H F +N+PPGTVVD + HPK FDFY+C+H G+ GT+RPTHYHIL D
Sbjct: 45332 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 45153
Query: 522 EIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
E F+ D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 45152 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 45033
Score = 54.2 bits (112), Expect(3) = 1e-042
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3 / -2
Query: 147 EDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 302
+D L+ + L+D + + K+ P+++I FRDGVSE+QF +VL ELQ I AC
Sbjct: 45527 QDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTAC 45372
Score = 24.4 bits (47), Expect(3) = 1e-042
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 738 LPRLHEKVRSSMFFC* 785
LP+L + V++ MF+C*
Sbjct: 44933 LPKLSDNVKNLMFYC* 44886
>ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1G69440 (AGO7) mRNA,
complete cds
Length = 3163
Score = 136 bits (291), Expect(3) = 1e-042
Identities = 52/100 (52%), Positives = 70/100 (70%)
Frame = +3 / +1
Query: 342 IIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHD 521
++ +++H F +N+PPGTVVD + HPK FDFY+C+H G+ GT+RPTHYHIL D
Sbjct: 2677 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 2856
Query: 522 EIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
E F+ D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 2857 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 2976
Score = 54.2 bits (112), Expect(3) = 1e-042
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3 / +1
Query: 147 EDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 302
+D L+ + L+D + + K+ P+++I FRDGVSE+QF +VL ELQ I AC
Sbjct: 2482 QDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTAC 2637
Score = 24.4 bits (47), Expect(3) = 1e-042
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 738 LPRLHEKVRSSMFFC* 785
LP+L + V++ MF+C*
Sbjct: 3076 LPKLSDNVKNLMFYC* 3123
>gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds
Length = 3161
Score = 136 bits (291), Expect(3) = 1e-042
Identities = 52/100 (52%), Positives = 70/100 (70%)
Frame = +3 / +1
Query: 342 IIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHD 521
++ +++H F +N+PPGTVVD + HPK FDFY+C+H G+ GT+RPTHYHIL D
Sbjct: 2677 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 2856
Query: 522 EIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
E F+ D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 2857 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 2976
Score = 54.2 bits (112), Expect(3) = 1e-042
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3 / +1
Query: 147 EDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 302
+D L+ + L+D + + K+ P+++I FRDGVSE+QF +VL ELQ I AC
Sbjct: 2482 QDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTAC 2637
Score = 24.4 bits (47), Expect(3) = 1e-042
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 738 LPRLHEKVRSSMFFC* 785
LP+L + V++ MF+C*
Sbjct: 3076 LPKLSDNVKNLMFYC* 3123
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 136 bits (291), Expect(2) = 7e-041
Identities = 52/100 (52%), Positives = 70/100 (70%)
Frame = +3 / -3
Query: 342 IIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHD 521
++ +++H F +N+PPGTVVD + HPK FDFY+C+H G+ GT+RPTHYHIL D
Sbjct: 10344207 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 10344028
Query: 522 EIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
E F+ D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 10344027 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 10343908
Score = 54.2 bits (112), Expect(2) = 7e-041
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3 / -3
Query: 147 EDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 302
+D L+ + L+D + + K+ P+++I FRDGVSE+QF +VL ELQ I AC
Sbjct: 10344402 QDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTAC 10344247
>gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769F213Q 5-PRIME, mRNA sequence
Length = 532
Score = 131 bits (281), Expect(2) = 9e-040
Identities = 49/95 (51%), Positives = 65/95 (68%)
Frame = +3 / +3
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H + N+ PGTVVD K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 144 NNHRDKNSTHRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 323
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 324 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 428
Score = 55.1 bits (114), Expect(2) = 9e-040
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +3 / +3
Query: 240 VSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
VSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 3 VSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 140
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 115 bits (245), Expect(2) = 7e-033
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +3 / +3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NVP GTVVD KV HP +DFY+C+H G IGT++PTHY+ L DE+GF+ D +Q+L+ + +
Sbjct: 11193474 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 11193653
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
+ R T +S+V P+ YA + A
Sbjct: 11193654 TFTRCTKPVSLVPPVYYADMVA 11193719
Score = 111 bits (236), Expect(3) = 1e-038
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +3 / +2
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NVP GTVVD + HP +DFY+C+ G IGT++PTHY++L DEIGF+ + +Q+L+ L +
Sbjct: 11200679 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 11200858
Query: 576 VYQRSTTAISVVAPICYAHLAAAQ 647
+ R T +++V P+ YA AA++
Sbjct: 11200859 TFTRCTKPVALVPPVSYADKAASR 11200930
Score = 54.7 bits (113), Expect(3) = 1e-038
Identities = 18/39 (46%), Positives = 33/39 (84%)
Frame = +3 / +2
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 290
LI+ ++ + +++P++++IFRDGVS+ QF+ VLN+ELQ +
Sbjct: 11200445 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 11200561
Score = 48.3 bits (99), Expect(2) = 7e-033
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = +3 / +3
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 290
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 11193243 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 11193359
Score = 35.0 bits (70), Expect(3) = 1e-038
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 321 WNPKFTLIIAQKNHHTKFF 377
+NP+ T+I+AQK H T+FF
Sbjct: 11200586 YNPQITVIVAQKRHQTRFF 11200642
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I,
complete sequence
Length = 87618
Score = 115 bits (245), Expect(2) = 8e-033
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +3 / +3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NVP GTVVD KV HP +DFY+C+H G IGT++PTHY+ L DE+GF+ D +Q+L+ + +
Sbjct: 25185 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 25364
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
+ R T +S+V P+ YA + A
Sbjct: 25365 TFTRCTKPVSLVPPVYYADMVA 25430
Score = 111 bits (236), Expect(3) = 2e-038
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +3 / +2
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NVP GTVVD + HP +DFY+C+ G IGT++PTHY++L DEIGF+ + +Q+L+ L +
Sbjct: 32390 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 32569
Query: 576 VYQRSTTAISVVAPICYAHLAAAQ 647
+ R T +++V P+ YA AA++
Sbjct: 32570 TFTRCTKPVALVPPVSYADKAASR 32641
Score = 54.7 bits (113), Expect(3) = 2e-038
Identities = 18/39 (46%), Positives = 33/39 (84%)
Frame = +3 / +2
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 290
LI+ ++ + +++P++++IFRDGVS+ QF+ VLN+ELQ +
Sbjct: 32156 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 32272
Score = 48.3 bits (99), Expect(2) = 8e-033
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = +3 / +3
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 290
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 24954 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 25070
Score = 35.0 bits (70), Expect(3) = 2e-038
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 321 WNPKFTLIIAQKNHHTKFF 377
+NP+ T+I+AQK H T+FF
Sbjct: 32297 YNPQITVIVAQKRHQTRFF 32353
>ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G31290 mRNA, complete cds
Length = 3585
Score = 111 bits (236), Expect(3) = 2e-038
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +3 / +1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NVP GTVVD + HP +DFY+C+ G IGT++PTHY++L DEIGF+ + +Q+L+ L +
Sbjct: 3166 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 3345
Query: 576 VYQRSTTAISVVAPICYAHLAAAQ 647
+ R T +++V P+ YA AA++
Sbjct: 3346 TFTRCTKPVALVPPVSYADKAASR 3417
Score = 54.7 bits (113), Expect(3) = 2e-038
Identities = 18/39 (46%), Positives = 33/39 (84%)
Frame = +3 / +1
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 290
LI+ ++ + +++P++++IFRDGVS+ QF+ VLN+ELQ +
Sbjct: 2932 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 3048
Score = 35.0 bits (70), Expect(3) = 2e-038
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 321 WNPKFTLIIAQKNHHTKFF 377
+NP+ T+I+AQK H T+FF
Sbjct: 3073 YNPQITVIVAQKRHQTRFF 3129
>gb|T21581.1|T21581 3589 Lambda-PRL2 Arabidopsis thaliana cDNA clone 95A9T7, mRNA
sequence
Length = 507
Score = 140 bits (300), Expect(2) = 7e-038
Identities = 60/91 (65%), Positives = 65/91 (71%)
Frame = +3 / +3
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPLISKYRASVRTQ K EMI SL K EDDG+I+E L+D
Sbjct: 69 SPGQSDVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIXSLVKKNGTEDDGIIKELLVD 248
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNI 275
FYTSS KRKP+ +II RDGVSESQFNQVLNI
Sbjct: 249 FYTSSNKRKPEHIIIXRDGVSESQFNQVLNI 341
Score = 40.0 bits (81), Expect(2) = 7e-038
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3 / +2
Query: 279 LQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
L Q I A K LD W+PK + QK+HH + F
Sbjct: 347 LIQXIXAXKLLDANWDPKXXXVCGQKDHHXQVF 445
>gb|CA781259.1|CA781259 014A08AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 569
Score = 90.0 bits (190), Expect(3) = 3e-036
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +3 / +2
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H + N+ PGTVVD K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 389 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPGHYHVLWDENNFT 568
Score = 72.1 bits (151), Expect(3) = 3e-036
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3 / +2
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 212 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 385
Score = 30.9 bits (61), Expect(3) = 3e-036
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFK 134
++WP ++KY V Q+ + E+I L+K
Sbjct: 47 QDWPEVTKYAGLVCAQAHRQELIQDLYK 130
>gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M35A4 5', mRNA sequence
Length = 394
Score = 98.7 bits (209), Expect(2) = 1e-034
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = +3 / +1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++
Sbjct: 223 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNN 393
Score = 70.7 bits (148), Expect(2) = 1e-034
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +3 / +1
Query: 207 KPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPG 386
KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 10 KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQN 189
Query: 387 KPD 395
D
Sbjct: 190 HND 198
>emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL91ZD02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 728
Score = 132 bits (282), Expect(2) = 4e-034
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3 / +1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D LQ L ++L Y
Sbjct: 127 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 306
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y R T ++S+V P YAHLAA
Sbjct: 307 TYARCTRSVSIVPPAYYAHLAA 372
Score = 35.9 bits (72), Expect(2) = 4e-034
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3 / +3
Query: 297 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPD 395
AC L+ + P T ++ QK HHT+ F D
Sbjct: 3 ACSSLEAGYQPPVTFVVVQKRHHTRLFAQNHND 101
>ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2) mRNA, complete cds
Length = 3042
Score = 115 bits (245), Expect(2) = 8e-033
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +3 / +1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NVP GTVVD KV HP +DFY+C+H G IGT++PTHY+ L DE+GF+ D +Q+L+ + +
Sbjct: 2623 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 2802
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
+ R T +S+V P+ YA + A
Sbjct: 2803 TFTRCTKPVSLVPPVYYADMVA 2868
Score = 48.3 bits (99), Expect(2) = 8e-033
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = +3 / +1
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 290
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 2392 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 2508
>dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unknown protein, complete
cds, clone: RAFL19-70-F03
Length = 1950
Score = 115 bits (245), Expect(2) = 8e-033
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +3 / +3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NVP GTVVD KV HP +DFY+C+H G IGT++PTHY+ L DE+GF+ D +Q+L+ + +
Sbjct: 1299 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 1478
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
+ R T +S+V P+ YA + A
Sbjct: 1479 TFTRCTKPVSLVPPVYYADMVA 1544
Score = 48.3 bits (99), Expect(2) = 8e-033
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = +3 / +3
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 290
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 1068 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 1184
>gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complete cds
Length = 1623
Score = 115 bits (245), Expect(2) = 8e-033
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +3 / +1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NVP GTVVD KV HP +DFY+C+H G IGT++PTHY+ L DE+GF+ D +Q+L+ + +
Sbjct: 1204 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 1383
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
+ R T +S+V P+ YA + A
Sbjct: 1384 TFTRCTKPVSLVPPVYYADMVA 1449
Score = 48.3 bits (99), Expect(2) = 8e-033
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = +3 / +1
Query: 174 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 290
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 973 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 1089
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete
sequence
Length = 94884
Score = 63.8 bits (133), Expect(5) = 3e-032
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3 / -1
Query: 225 IFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
++ DGVSE QF+QVL E+ I +AC L E + P+ T +I QK HHT+ F
Sbjct: 85149 LYSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 84997
Score = 50.6 bits (104), Expect(5) = 3e-032
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +3 / -3
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAI 602
GT+RP HYH+L DE GF+ D LQ L ++L Y + +T I
Sbjct: 84697 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT*ETTTLYI 84578
Score = 49.2 bits (101), Expect(5) = 3e-032
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3 / -1
Query: 408 GTVVDNKVCHPKNFDFYMCAHAGM 479
GTVVD K+CHP FDFY+ +HAG+
Sbjct: 84858 GTVVDTKICHPNEFDFYLNSHAGI 84787
Score = 46.4 bits (95), Expect(5) = 3e-032
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3 / -3
Query: 579 YQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEK 758
Y R T ++S+V P YAHLAA + +++ + + +LP + +
Sbjct: 84514 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPAIKDN 84335
Query: 759 VRSSMFFC* 785
V+ MF+C*
Sbjct: 84334 VKEVMFYC* 84308
Score = 37.3 bits (75), Expect(5) = 3e-032
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3 / -1
Query: 54 EWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLI 179
+WP I+KYR V Q+ + E+I L+K + GL+ LI
Sbjct: 85491 DWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 85366
>gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ053e11F 3', mRNA sequence
Length = 551
Score = 136 bits (291), Expect(2) = 6e-032
Identities = 52/100 (52%), Positives = 70/100 (70%)
Frame = +3 / -2
Query: 342 IIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHD 521
++ +++H F +N+PPGTVVD + HPK FDFY+C+H G+ GT+RPTHYHIL D
Sbjct: 484 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 305
Query: 522 EIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
E F+ D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 304 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 185
Score = 24.4 bits (47), Expect(2) = 6e-032
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 738 LPRLHEKVRSSMFFC* 785
LP+L + V++ MF+C*
Sbjct: 85 LPKLSDNVKNLMFYC* 38
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
sequence
Length = 118196
Score = 63.8 bits (133), Expect(5) = 6e-032
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3 / -1
Query: 225 IFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
++ DGVSE QF+QVL E+ I +AC L E + P+ T +I QK HHT+ F
Sbjct: 3806 LYSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 3654
Score = 50.6 bits (104), Expect(5) = 6e-032
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +3 / -3
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAI 602
GT+RP HYH+L DE GF+ D LQ L ++L Y + +T I
Sbjct: 3354 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT*ETTTLYI 3235
Score = 49.2 bits (101), Expect(5) = 6e-032
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3 / -1
Query: 408 GTVVDNKVCHPKNFDFYMCAHAGM 479
GTVVD K+CHP FDFY+ +HAG+
Sbjct: 3515 GTVVDTKICHPNEFDFYLNSHAGI 3444
Score = 46.4 bits (95), Expect(5) = 6e-032
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3 / -3
Query: 579 YQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEK 758
Y R T ++S+V P YAHLAA + +++ + + +LP + +
Sbjct: 3171 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPAIKDN 2992
Query: 759 VRSSMFFC* 785
V+ MF+C*
Sbjct: 2991 VKEVMFYC* 2965
Score = 37.3 bits (75), Expect(5) = 6e-032
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3 / -1
Query: 54 EWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLI 179
+WP I+KYR V Q+ + E+I L+K + GL+ LI
Sbjct: 4148 DWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 4023
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,109,560,603
Number of Sequences: 1013581
Number of extensions: 29047128
Number of successful extensions: 155316
Number of sequences better than 1.0e-020: 74
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 69883759305
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)