TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.2
(1076 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO... 439 e-122
gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1... 439 e-122
emb|AX505699.1| Sequence 394 from Patent WO0216655 439 e-122
ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT... 439 e-122
dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhea... 434 e-120
ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G2... 434 e-120
dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for put... 432 e-119
emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGO... 431 e-119
emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cD... 373 e-102
ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G3... 294 3e-096
gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P... 78 3e-093
ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G2... 229 1e-090
gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 75 3e-080
gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis tha... 79 3e-080
gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11... 79 5e-077
gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flower... 202 7e-063
gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveg... 230 8e-059
gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveg... 229 1e-058
gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14... 73 6e-058
ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G2... 142 1e-055
emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cD... 142 8e-054
ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 129 5e-050
ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 129 5e-050
gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein... 129 5e-050
gb|BT000941.1| Arabidopsis thaliana clone C105223 putative ... 129 5e-050
gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence 129 5e-050
ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G4381... 129 7e-048
emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwil... 129 7e-048
emb|AX505737.1| Sequence 432 from Patent WO0216655 129 7e-048
emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cD... 129 2e-046
gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveg... 178 2e-043
gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana ... 129 2e-042
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 132 3e-041
ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1... 132 3e-041
gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds 132 3e-041
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 116 6e-040
gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis tha... 116 7e-040
ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G3... 115 7e-040
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 132 2e-039
gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS... 128 6e-039
gb|T21581.1|T21581 3589 Lambda-PRL2 Arabidopsis thaliana cD... 136 1e-036
gb|CA781259.1|CA781259 014A08AF Infected Arabidopsis Leaf A... 87 2e-035
ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2)... 116 1e-034
dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unk... 116 1e-034
gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complet... 116 1e-034
gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed... 96 1e-033
emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cD... 129 3e-033
gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2... 64 1e-032
gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K... 64 2e-032
gb|AV523023.1|AV523023 AV523023 Arabidopsis thaliana aboveg... 138 2e-031
gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Siliqu... 138 3e-031
gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green ... 132 1e-030
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 132 3e-029
gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveg... 125 3e-029
gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-... 129 2e-028
gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots ... 129 2e-028
gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green ... 129 2e-028
gb|CK121100.1|CK121100 204j21.p1 AtM1 Arabidopsis thaliana ... 72 7e-028
emb|BX943872.1| Arabidopsis thaliana T-DNA flanking sequenc... 72 1e-026
gb|AF154272.1|AF154272 Arabidopsis thaliana PINHEAD (PINHEA... 57 1e-025
gb|BU635669.1|BU635669 028G09 Infected Arabidopsis Leaf Ara... 107 1e-024
gb|BE528457.1|BE528457 M79F16STM Arabidopsis developing see... 111 4e-023
gb|CC794982.1|CC794982 SALK_060402.40.25.x Arabidopsis thal... 72 3e-022
emb|BX943873.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 9e-022
gb|CD534067.1|CD534067 35F4 Arabidopsis Leaf Senescence Lib... 72 1e-021
gb|AV546094.1|AV546094 AV546094 Arabidopsis thaliana roots ... 106 1e-021
dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosom... 57 3e-021
gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis tha... 56 4e-021
gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC ... 56 5e-021
>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
mRNA, complete cds
Length = 3171
Score = 439 bits (953), Expect = e-122
Identities = 173/245 (70%), Positives = 202/245 (82%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
REWPLISKYRASVRTQ K EMI+SL K T+DDG+I+E L+DFYTSS KRKP+ +IIF
Sbjct: 2171 REWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVDFYTSSNKRKPEHIIIF 2350
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++AQKNHHTKFF P P+NVP G
Sbjct: 2351 RDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPG 2530
Query: 668 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 489
T++DNK+CHP+N DFY+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQELVHSLSYVYQRS
Sbjct: 2531 TIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSLSYVYQRS 2710
Query: 488 TTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSS 309
T+AISVVAPICYAHLAAAQ+G F+KF++ + V +LPRL + V +S
Sbjct: 2711 TSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANS 2890
Query: 308 MFFC* 294
MFFC*
Sbjct: 2891 MFFC* 2905
Score = 269 bits (581), Expect = 1e-070
Identities = 145/255 (56%), Positives = 159/255 (62%)
Frame = +1 / -1
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 2901 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2722
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 657
MA+VLLWY KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 2721 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2542
Query: 658 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSL 837
S VP GT SG G KNLV *FF A N GF F+S++LQASMI +S+F T LN* SL
Sbjct: 2541 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSL 2362
Query: 838 TPSLKMMTWSGFLFPELV*KXXXXXXXXXXXXXXXGLNNESIISIFGDWVRTDALYFEIR 1017
TPSLK+M SGFL ELV*K L +SIIS VRTDALY +I
Sbjct: 2361 TPSLKIMICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDIS 2182
Query: 1018 GHSRELTTAATDXTS 1062
GHS ELTTAA D TS
Sbjct: 2181 GHSLELTTAAMDGTS 2137
Score = 213 bits (460), Expect = 7e-054
Identities = 104/250 (41%), Positives = 155/250 (62%)
Frame = +3 / -3
Query: 300 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 479
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 2899 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 2720
Query: 480 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 659
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 2719 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 2540
Query: 660 NNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTFTN 839
N+ NI E+ ++ILL + Q EL +P + + ASL+DL++ N+Q+L++L FT+
Sbjct: 2539 NDCPWRNIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTH 2360
Query: 840 TVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNHFHFW*LGADRCSVFRDKR 1019
T+PE+ D++ SL GVE+ Q L + IV S +L + +NH L +RCS+F +
Sbjct: 2359 TIPENYDMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQW 2180
Query: 1020 PFTRTNHSSN 1049
P RT+HSS+
Sbjct: 2179 PLPRTHHSSD 2150
Score = 105 bits (223), Expect(2) = 5e-022
Identities = 85/209 (40%), Positives = 103/209 (49%)
Frame = -2 / +3
Query: 1006 NTEHLSAPNHQKWK*LTRCLSHGKLMTMV*FGSV*LTSTPVQGRESLTKSSSSGTVLVKV 827
N EHL + + +*L+ +L TM S STP + RE+ + S SG V V +
Sbjct: 2193 NIEHLFGHSLLRLR*LSPLSRKMELKTMALSRSCW*ISTPARIRENQSIS*FSGMV*VNL 2372
Query: 826 SLTRC*TLSCNKSLRLANFLMRNGIPSSH*SLPRRITTLNFSFLESQIMFQLALLLTTKS 647
+ R * L+ +S RLA+ + G SS +RI + S MF LTTK
Sbjct: 2373 NSIRF*ILNLIRSSRLASS*TQIGTQSSFCWWLKRIIIPSSSSQRLLKMFLQGQSLTTKY 2552
Query: 646 VIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLL 467
V Q T IST V LE*L LP QLT TSCM R L R+ TRS CTK A P+ LL
Sbjct: 2553 VTQRTMISTSVLTLE*LELPAQLTTTSCMMRLVFQLTNFRNLSTRSPMCTKEAPVPFLLL 2732
Query: 466 LPSATPTLQPPRLGSS*SSTRCRRLHLAM 380
SA T Q LG S*S R H AM
Sbjct: 2733 RRSAMLTWQLLSLGRS*SLKISLRHHQAM 2819
Score = 22.1 bits (42), Expect(2) = 5e-022
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 1044 CCG*FS*MASYLEIQSIC 991
CCG F +A+ ++I SIC
Sbjct: 2155 CCGEF*GVATDIQI*SIC 2208
>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
mRNA, complete cds
Length = 2806
Score = 439 bits (953), Expect = e-122
Identities = 173/245 (70%), Positives = 202/245 (82%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
REWPLISKYRASVRTQ K EMI+SL K T+DDG+I+E L+DFYTSS KRKP+ +IIF
Sbjct: 2041 REWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVDFYTSSNKRKPEHIIIF 2220
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++AQKNHHTKFF P P+NVP G
Sbjct: 2221 RDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPG 2400
Query: 668 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 489
T++DNK+CHP+N DFY+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQELVHSLSYVYQRS
Sbjct: 2401 TIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSLSYVYQRS 2580
Query: 488 TTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSS 309
T+AISVVAPICYAHLAAAQ+G F+KF++ + V +LPRL + V +S
Sbjct: 2581 TSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANS 2760
Query: 308 MFFC* 294
MFFC*
Sbjct: 2761 MFFC* 2775
Score = 269 bits (581), Expect = 1e-070
Identities = 145/255 (56%), Positives = 159/255 (62%)
Frame = +1 / -3
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 2771 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2592
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 657
MA+VLLWY KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 2591 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2412
Query: 658 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSL 837
S VP GT SG G KNLV *FF A N GF F+S++LQASMI +S+F T LN* SL
Sbjct: 2411 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSL 2232
Query: 838 TPSLKMMTWSGFLFPELV*KXXXXXXXXXXXXXXXGLNNESIISIFGDWVRTDALYFEIR 1017
TPSLK+M SGFL ELV*K L +SIIS VRTDALY +I
Sbjct: 2231 TPSLKIMICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDIS 2052
Query: 1018 GHSRELTTAATDXTS 1062
GHS ELTTAA D TS
Sbjct: 2051 GHSLELTTAAMDGTS 2007
Score = 213 bits (460), Expect = 7e-054
Identities = 104/250 (41%), Positives = 155/250 (62%)
Frame = +3 / -2
Query: 300 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 479
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 2769 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 2590
Query: 480 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 659
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 2589 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 2410
Query: 660 NNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTFTN 839
N+ NI E+ ++ILL + Q EL +P + + ASL+DL++ N+Q+L++L FT+
Sbjct: 2409 NDCPWRNIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTH 2230
Query: 840 TVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNHFHFW*LGADRCSVFRDKR 1019
T+PE+ D++ SL GVE+ Q L + IV S +L + +NH L +RCS+F +
Sbjct: 2229 TIPENYDMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQW 2050
Query: 1020 PFTRTNHSSN 1049
P RT+HSS+
Sbjct: 2049 PLPRTHHSSD 2020
Score = 105 bits (223), Expect(2) = 5e-022
Identities = 85/209 (40%), Positives = 103/209 (49%)
Frame = -2 / +2
Query: 1006 NTEHLSAPNHQKWK*LTRCLSHGKLMTMV*FGSV*LTSTPVQGRESLTKSSSSGTVLVKV 827
N EHL + + +*L+ +L TM S STP + RE+ + S SG V V +
Sbjct: 2063 NIEHLFGHSLLRLR*LSPLSRKMELKTMALSRSCW*ISTPARIRENQSIS*FSGMV*VNL 2242
Query: 826 SLTRC*TLSCNKSLRLANFLMRNGIPSSH*SLPRRITTLNFSFLESQIMFQLALLLTTKS 647
+ R * L+ +S RLA+ + G SS +RI + S MF LTTK
Sbjct: 2243 NSIRF*ILNLIRSSRLASS*TQIGTQSSFCWWLKRIIIPSSSSQRLLKMFLQGQSLTTKY 2422
Query: 646 VIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLL 467
V Q T IST V LE*L LP QLT TSCM R L R+ TRS CTK A P+ LL
Sbjct: 2423 VTQRTMISTSVLTLE*LELPAQLTTTSCMMRLVFQLTNFRNLSTRSPMCTKEAPVPFLLL 2602
Query: 466 LPSATPTLQPPRLGSS*SSTRCRRLHLAM 380
SA T Q LG S*S R H AM
Sbjct: 2603 RRSAMLTWQLLSLGRS*SLKISLRHHQAM 2689
Score = 22.1 bits (42), Expect(2) = 5e-022
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 1044 CCG*FS*MASYLEIQSIC 991
CCG F +A+ ++I SIC
Sbjct: 2025 CCGEF*GVATDIQI*SIC 2078
>emb|AX505699.1| Sequence 394 from Patent WO0216655
Length = 2793
Score = 439 bits (953), Expect = e-122
Identities = 173/245 (70%), Positives = 202/245 (82%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
REWPLISKYRASVRTQ K EMI+SL K T+DDG+I+E L+DFYTSS KRKP+ +IIF
Sbjct: 2059 REWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVDFYTSSNKRKPEHIIIF 2238
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++AQKNHHTKFF P P+NVP G
Sbjct: 2239 RDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPG 2418
Query: 668 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 489
T++DNK+CHP+N DFY+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQELVHSLSYVYQRS
Sbjct: 2419 TIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSLSYVYQRS 2598
Query: 488 TTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSS 309
T+AISVVAPICYAHLAAAQ+G F+KF++ + V +LPRL + V +S
Sbjct: 2599 TSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANS 2778
Query: 308 MFFC* 294
MFFC*
Sbjct: 2779 MFFC* 2793
Score = 269 bits (581), Expect = 1e-070
Identities = 145/255 (56%), Positives = 159/255 (62%)
Frame = +1 / -2
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 2789 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2610
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 657
MA+VLLWY KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 2609 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2430
Query: 658 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSL 837
S VP GT SG G KNLV *FF A N GF F+S++LQASMI +S+F T LN* SL
Sbjct: 2429 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSL 2250
Query: 838 TPSLKMMTWSGFLFPELV*KXXXXXXXXXXXXXXXGLNNESIISIFGDWVRTDALYFEIR 1017
TPSLK+M SGFL ELV*K L +SIIS VRTDALY +I
Sbjct: 2249 TPSLKIMICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDIS 2070
Query: 1018 GHSRELTTAATDXTS 1062
GHS ELTTAA D TS
Sbjct: 2069 GHSLELTTAAMDGTS 2025
Score = 213 bits (460), Expect = 7e-054
Identities = 104/250 (41%), Positives = 155/250 (62%)
Frame = +3 / -1
Query: 300 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 479
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 2787 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 2608
Query: 480 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 659
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 2607 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 2428
Query: 660 NNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTFTN 839
N+ NI E+ ++ILL + Q EL +P + + ASL+DL++ N+Q+L++L FT+
Sbjct: 2427 NDCPWRNIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTH 2248
Query: 840 TVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNHFHFW*LGADRCSVFRDKR 1019
T+PE+ D++ SL GVE+ Q L + IV S +L + +NH L +RCS+F +
Sbjct: 2247 TIPENYDMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQW 2068
Query: 1020 PFTRTNHSSN 1049
P RT+HSS+
Sbjct: 2067 PLPRTHHSSD 2038
Score = 105 bits (223), Expect(2) = 5e-022
Identities = 85/209 (40%), Positives = 103/209 (49%)
Frame = -2 / +2
Query: 1006 NTEHLSAPNHQKWK*LTRCLSHGKLMTMV*FGSV*LTSTPVQGRESLTKSSSSGTVLVKV 827
N EHL + + +*L+ +L TM S STP + RE+ + S SG V V +
Sbjct: 2081 NIEHLFGHSLLRLR*LSPLSRKMELKTMALSRSCW*ISTPARIRENQSIS*FSGMV*VNL 2260
Query: 826 SLTRC*TLSCNKSLRLANFLMRNGIPSSH*SLPRRITTLNFSFLESQIMFQLALLLTTKS 647
+ R * L+ +S RLA+ + G SS +RI + S MF LTTK
Sbjct: 2261 NSIRF*ILNLIRSSRLASS*TQIGTQSSFCWWLKRIIIPSSSSQRLLKMFLQGQSLTTKY 2440
Query: 646 VIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLL 467
V Q T IST V LE*L LP QLT TSCM R L R+ TRS CTK A P+ LL
Sbjct: 2441 VTQRTMISTSVLTLE*LELPAQLTTTSCMMRLVFQLTNFRNLSTRSPMCTKEAPVPFLLL 2620
Query: 466 LPSATPTLQPPRLGSS*SSTRCRRLHLAM 380
SA T Q LG S*S R H AM
Sbjct: 2621 RRSAMLTWQLLSLGRS*SLKISLRHHQAM 2707
Score = 22.1 bits (42), Expect(2) = 5e-022
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 1044 CCG*FS*MASYLEIQSIC 991
CCG F +A+ ++I SIC
Sbjct: 2043 CCGEF*GVATDIQI*SIC 2096
>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA,
complete cds
Length = 3166
Score = 439 bits (953), Expect = e-122
Identities = 173/245 (70%), Positives = 202/245 (82%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
REWPLISKYRASVRTQ K EMI+SL K T+DDG+I+E L+DFYTSS KRKP+ +IIF
Sbjct: 2171 REWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVDFYTSSNKRKPEHIIIF 2350
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++AQKNHHTKFF P P+NVP G
Sbjct: 2351 RDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPG 2530
Query: 668 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 489
T++DNK+CHP+N DFY+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQELVHSLSYVYQRS
Sbjct: 2531 TIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSLSYVYQRS 2710
Query: 488 TTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSS 309
T+AISVVAPICYAHLAAAQ+G F+KF++ + V +LPRL + V +S
Sbjct: 2711 TSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANS 2890
Query: 308 MFFC* 294
MFFC*
Sbjct: 2891 MFFC* 2905
Score = 269 bits (581), Expect = 1e-070
Identities = 145/255 (56%), Positives = 159/255 (62%)
Frame = +1 / -2
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 2901 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2722
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 657
MA+VLLWY KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 2721 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2542
Query: 658 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSL 837
S VP GT SG G KNLV *FF A N GF F+S++LQASMI +S+F T LN* SL
Sbjct: 2541 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSL 2362
Query: 838 TPSLKMMTWSGFLFPELV*KXXXXXXXXXXXXXXXGLNNESIISIFGDWVRTDALYFEIR 1017
TPSLK+M SGFL ELV*K L +SIIS VRTDALY +I
Sbjct: 2361 TPSLKIMICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDIS 2182
Query: 1018 GHSRELTTAATDXTS 1062
GHS ELTTAA D TS
Sbjct: 2181 GHSLELTTAAMDGTS 2137
Score = 213 bits (460), Expect = 7e-054
Identities = 104/250 (41%), Positives = 155/250 (62%)
Frame = +3 / -1
Query: 300 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 479
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 2899 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 2720
Query: 480 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 659
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 2719 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 2540
Query: 660 NNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTFTN 839
N+ NI E+ ++ILL + Q EL +P + + ASL+DL++ N+Q+L++L FT+
Sbjct: 2539 NDCPWRNIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTH 2360
Query: 840 TVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNHFHFW*LGADRCSVFRDKR 1019
T+PE+ D++ SL GVE+ Q L + IV S +L + +NH L +RCS+F +
Sbjct: 2359 TIPENYDMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQW 2180
Query: 1020 PFTRTNHSSN 1049
P RT+HSS+
Sbjct: 2179 PLPRTHHSSD 2150
Score = 105 bits (223), Expect(2) = 5e-022
Identities = 85/209 (40%), Positives = 103/209 (49%)
Frame = -2 / +3
Query: 1006 NTEHLSAPNHQKWK*LTRCLSHGKLMTMV*FGSV*LTSTPVQGRESLTKSSSSGTVLVKV 827
N EHL + + +*L+ +L TM S STP + RE+ + S SG V V +
Sbjct: 2193 NIEHLFGHSLLRLR*LSPLSRKMELKTMALSRSCW*ISTPARIRENQSIS*FSGMV*VNL 2372
Query: 826 SLTRC*TLSCNKSLRLANFLMRNGIPSSH*SLPRRITTLNFSFLESQIMFQLALLLTTKS 647
+ R * L+ +S RLA+ + G SS +RI + S MF LTTK
Sbjct: 2373 NSIRF*ILNLIRSSRLASS*TQIGTQSSFCWWLKRIIIPSSSSQRLLKMFLQGQSLTTKY 2552
Query: 646 VIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLL 467
V Q T IST V LE*L LP QLT TSCM R L R+ TRS CTK A P+ LL
Sbjct: 2553 VTQRTMISTSVLTLE*LELPAQLTTTSCMMRLVFQLTNFRNLSTRSPMCTKEAPVPFLLL 2732
Query: 466 LPSATPTLQPPRLGSS*SSTRCRRLHLAM 380
SA T Q LG S*S R H AM
Sbjct: 2733 RRSAMLTWQLLSLGRS*SLKISLRHHQAM 2819
Score = 22.1 bits (42), Expect(2) = 5e-022
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 1044 CCG*FS*MASYLEIQSIC 991
CCG F +A+ ++I SIC
Sbjct: 2155 CCGEF*GVATDIQI*SIC 2208
>dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhead-like protein, partial
cds, clone: RAFL22-12-J01
Length = 1966
Score = 434 bits (941), Expect = e-120
Identities = 169/245 (68%), Positives = 203/245 (82%)
Frame = -1 / +3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
R+WPLISKY+A VRTQS KMEMID+LFKP D+G+ RE L+DFY SS RKP+ +IIF
Sbjct: 1011 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLDFYYSSENRKPEHIIIF 1190
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL Q+++ACKFLD+ W+PKFT+I+AQKNHHTKFF PDNVP G
Sbjct: 1191 RDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPG 1370
Query: 668 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 489
T++D+++CHPRNFDFY+C+HAGMIGTTRPTHYH+L+DEIGF DDLQELVHSLSYVYQRS
Sbjct: 1371 TIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQELVHSLSYVYQRS 1550
Query: 488 TTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSS 309
TTAISVVAP+CYAHLAAAQ+G +K++E+ +VPV +P+LH V +S
Sbjct: 1551 TTAISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGMTTPGAVPVPPMPQLHNNVSTS 1730
Query: 308 MFFC* 294
MFFC*
Sbjct: 1731 MFFC* 1745
Score = 213 bits (460), Expect = 7e-054
Identities = 101/256 (39%), Positives = 158/256 (61%)
Frame = +3 / -3
Query: 294 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 473
S EEHG + ++Q RD +R G MAR SLR L L+ +L C++ V N+
Sbjct: 1745 STEEHGG*NIIVQLRHRWHRDCSRCGHSSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 1566
Query: 474 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 653
* APLV + +R+H+ L+V+ + LV+Q++++ WP S NH+SM +EI+V W+TD
Sbjct: 1565 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 1386
Query: 654 VVNNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTF 833
VN+ + NII SR E+ VV+LLGN C+L +P +IKK A L+ L+Q N+++L++L
Sbjct: 1385 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRL 1206
Query: 834 TNTVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNHFHFW*LGADRCSVFRD 1013
T+PE++D++ + *T V+V Q P + V + ++ +NHFHF *L A C +F D
Sbjct: 1205 AYTIPENNDVLWFPIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*D 1026
Query: 1014 KRPFTRTNHSSNRXYL 1061
+ P + ++SSN Y+
Sbjct: 1025 EWPLS*AHNSSN*WYI 978
Score = 187 bits (402), Expect(2) = 4e-067
Identities = 100/171 (58%), Positives = 105/171 (61%)
Frame = +1 / -1
Query: 550 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFW 729
PISS R * VGLVVPI+PA *KSK G*Q LS VP GTLSG KN VW FFW
Sbjct: 1489 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 1310
Query: 730 AMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSLTPSLKMMTWSGFLFPELV*KXXXX 909
A I VN G H SSRNL A +I NS+ T LN* SLTPSLK+M SGFLF EL *K
Sbjct: 1309 ATITVNFGCHVSSRNLHACII*SNSILRT*LN*DSLTPSLKIMMCSGFLFSEL**KSNKS 1130
Query: 910 XXXXXXXXXXXGLNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDXTS 1062
GL SIISI D VRT ALYFE+ GH ELTTAA D S
Sbjct: 1129 SLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTTAAIDGIS 977
Score = 91.3 bits (193), Expect(2) = 4e-067
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +1 / -1
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* GATT
Sbjct: 1744 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 1565
Query: 475 DMAVVLLW 498
++AVVLLW
Sbjct: 1564 EIAVVLLW 1541
Score = 90.9 bits (192), Expect(2) = 2e-023
Identities = 75/202 (37%), Positives = 89/202 (44%)
Frame = -2 / +1
Query: 898 TSTPVQGRESLTKSSSSGTVLVKVSLTRC*TLSCNKSLRLANFLMRNGIPSSH*SLPRRI 719
T T VQ + + S SG V +S + L+ + R A+FLM GI S * LPRR
Sbjct: 1141 TFTTVQRIGNQSTSLFSGMV*ASLSSIKFLILNWIR*CRHASFLMIRGIRSLQ**LPRRT 1320
Query: 718 TTLNFSFLESQIMFQLALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASIL 539
TT + S LE+ IMF LT +SV T IS ML *L L GQ CMTR
Sbjct: 1321 TTQSSSSLEALIMFLQEQSLTARSVTHATLISISAPMLA*LELQGQHITMFCMTRLGLPQ 1500
Query: 538 MTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRRLHLAMGGIPRRA 359
T ++ C T+GA Q L T Q R *S C RL AM P
Sbjct: 1501 TTSKNLCILCPMSTRGAPLRSQSLHLYVTLIWQLHRWEL**SMKSCLRLLRAMEE*PHLE 1680
Query: 358 ASLSRSCPVCMRK*GAPCSSAE 293
SL C C PCSS +
Sbjct: 1681 QSLCHLCRSCTIMFQPPCSSVD 1746
Score = 41.4 bits (84), Expect(2) = 2e-023
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / +2
Query: 1047 CCCG*FS*MASYLEIQSICPHPITKNGND* 958
CCC MA++L+I +C H IT+NGND*
Sbjct: 992 CCCCELKTMATHLKI*GMCTHTITQNGND* 1081
>ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G21150 mRNA, complete cds
Length = 3018
Score = 434 bits (941), Expect = e-120
Identities = 169/245 (68%), Positives = 203/245 (82%)
Frame = -1 / +3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
R+WPLISKY+A VRTQS KMEMID+LFKP D+G+ RE L+DFY SS RKP+ +IIF
Sbjct: 2073 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLDFYYSSENRKPEHIIIF 2252
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL Q+++ACKFLD+ W+PKFT+I+AQKNHHTKFF PDNVP G
Sbjct: 2253 RDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPG 2432
Query: 668 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 489
T++D+++CHPRNFDFY+C+HAGMIGTTRPTHYH+L+DEIGF DDLQELVHSLSYVYQRS
Sbjct: 2433 TIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQELVHSLSYVYQRS 2612
Query: 488 TTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSS 309
TTAISVVAP+CYAHLAAAQ+G +K++E+ +VPV +P+LH V +S
Sbjct: 2613 TTAISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVPPMPQLHNNVSTS 2792
Query: 308 MFFC* 294
MFFC*
Sbjct: 2793 MFFC* 2807
Score = 213 bits (459), Expect = 1e-053
Identities = 101/256 (39%), Positives = 158/256 (61%)
Frame = +3 / -2
Query: 294 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 473
S EEHG + ++Q RD +R G MAR SLR L L+ +L C++ V N+
Sbjct: 2807 STEEHGG*NIIVQLRHRWHRDCSRCGDSSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 2628
Query: 474 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 653
* APLV + +R+H+ L+V+ + LV+Q++++ WP S NH+SM +EI+V W+TD
Sbjct: 2627 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2448
Query: 654 VVNNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTF 833
VN+ + NII SR E+ VV+LLGN C+L +P +IKK A L+ L+Q N+++L++L
Sbjct: 2447 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRL 2268
Query: 834 TNTVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNHFHFW*LGADRCSVFRD 1013
T+PE++D++ + *T V+V Q P + V + ++ +NHFHF *L A C +F D
Sbjct: 2267 AYTIPENNDVLWFPIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*D 2088
Query: 1014 KRPFTRTNHSSNRXYL 1061
+ P + ++SSN Y+
Sbjct: 2087 EWPLS*AHNSSN*WYI 2040
Score = 187 bits (402), Expect(2) = 4e-067
Identities = 100/171 (58%), Positives = 105/171 (61%)
Frame = +1 / -3
Query: 550 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFW 729
PISS R * VGLVVPI+PA *KSK G*Q LS VP GTLSG KN VW FFW
Sbjct: 2551 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2372
Query: 730 AMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSLTPSLKMMTWSGFLFPELV*KXXXX 909
A I VN G H SSRNL A +I NS+ T LN* SLTPSLK+M SGFLF EL *K
Sbjct: 2371 ATITVNFGCHVSSRNLHACII*SNSILRT*LN*DSLTPSLKIMMCSGFLFSEL**KSNKS 2192
Query: 910 XXXXXXXXXXXGLNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDXTS 1062
GL SIISI D VRT ALYFE+ GH ELTTAA D S
Sbjct: 2191 SLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTTAAIDGIS 2039
Score = 91.8 bits (194), Expect(2) = 9e-024
Identities = 75/202 (37%), Positives = 89/202 (44%)
Frame = -2 / +1
Query: 898 TSTPVQGRESLTKSSSSGTVLVKVSLTRC*TLSCNKSLRLANFLMRNGIPSSH*SLPRRI 719
T T VQ + + S SG V +S + L+ + R A+FLM GI S * LPRR
Sbjct: 2203 TFTTVQRIGNQSTSLFSGMV*ASLSSIKFLILNWIR*CRHASFLMIRGIRSLQ**LPRRT 2382
Query: 718 TTLNFSFLESQIMFQLALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASIL 539
TT + S LE+ IMF LT +SV T IS ML *L L GQ CMTR
Sbjct: 2383 TTQSSSSLEALIMFLQEQSLTARSVTHATLISISAPMLA*LELQGQHITMFCMTRLGLPQ 2562
Query: 538 MTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRRLHLAMGGIPRRA 359
T ++ C T+GA Q L T Q R *S C RL AM P
Sbjct: 2563 TTSKNLCILCPMSTRGAPLRSQSLHLYVTLIWQLHRWEL**SMKSCLRLLRAMEESPHLE 2742
Query: 358 ASLSRSCPVCMRK*GAPCSSAE 293
SL C C PCSS +
Sbjct: 2743 QSLCHLCRSCTIMFQPPCSSVD 2808
Score = 91.3 bits (193), Expect(2) = 4e-067
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +1 / -3
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* GATT
Sbjct: 2806 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 2627
Query: 475 DMAVVLLW 498
++AVVLLW
Sbjct: 2626 EIAVVLLW 2603
Score = 41.4 bits (84), Expect(2) = 9e-024
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / +2
Query: 1047 CCCG*FS*MASYLEIQSICPHPITKNGND* 958
CCC MA++L+I +C H IT+NGND*
Sbjct: 2054 CCCCELKTMATHLKI*GMCTHTITQNGND* 2143
>dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative zwille/pinhead,
complete cds, clone: RAFL19-56-B01
Length = 3090
Score = 432 bits (937), Expect = e-119
Identities = 168/245 (68%), Positives = 202/245 (82%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
R+WPLISKY+A VRTQS KMEMID+LFKP D+G+ RE L+DFY SS RKP+ +IIF
Sbjct: 2138 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLDFYYSSENRKPEHIIIF 2317
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL Q+++ACKFLD+ W+PKFT+I+AQKNHHTKFF PDNVP G
Sbjct: 2318 RDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPG 2497
Query: 668 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 489
T++D+++CHPRNFDFY+C+HAGMIGTTRPTHYH+L+DEIGF DDLQELVHSLSYVYQRS
Sbjct: 2498 TIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQELVHSLSYVYQRS 2677
Query: 488 TTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSS 309
TTAISVV P+CYAHLAAAQ+G +K++E+ +VPV +P+LH V +S
Sbjct: 2678 TTAISVVVPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVPPMPQLHNNVSTS 2857
Query: 308 MFFC* 294
MFFC*
Sbjct: 2858 MFFC* 2872
Score = 207 bits (446), Expect = 6e-052
Identities = 100/256 (39%), Positives = 157/256 (61%)
Frame = +3 / -3
Query: 294 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 473
S EEHG + ++Q RD +R G MAR SLR L L+ +L C++ V N+
Sbjct: 2872 STEEHGG*NIIVQLRHRWHRDCSRCGDSSMARRSLRQLFILHHSSHLCSCQMSVTYRYND 2693
Query: 474 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 653
* APLV + +R+H+ L+V+ + LV+Q++++ WP S NH+SM +EI+V W+TD
Sbjct: 2692 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2513
Query: 654 VVNNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTF 833
VN+ + NII SR E+ VV+LLGN C+L +P +IKK A L+ L+Q N+++L++L
Sbjct: 2512 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRL 2333
Query: 834 TNTVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNHFHFW*LGADRCSVFRD 1013
T+PE++D++ + *T V+V Q P + V + ++ +NHFHF *L A +F D
Sbjct: 2332 AYTIPENNDVLWFPIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTRLIF*D 2153
Query: 1014 KRPFTRTNHSSNRXYL 1061
+ P + ++SSN Y+
Sbjct: 2152 EWPLS*AHNSSN*WYI 2105
Score = 187 bits (402), Expect(2) = 1e-066
Identities = 100/171 (58%), Positives = 105/171 (61%)
Frame = +1 / -1
Query: 550 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFW 729
PISS R * VGLVVPI+PA *KSK G*Q LS VP GTLSG KN VW FFW
Sbjct: 2616 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2437
Query: 730 AMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSLTPSLKMMTWSGFLFPELV*KXXXX 909
A I VN G H SSRNL A +I NS+ T LN* SLTPSLK+M SGFLF EL *K
Sbjct: 2436 ATITVNFGCHVSSRNLHACII*SNSILRT*LN*DSLTPSLKIMMCSGFLFSEL**KSNKS 2257
Query: 910 XXXXXXXXXXXGLNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDXTS 1062
GL SIISI D VRT ALYFE+ GH ELTTAA D S
Sbjct: 2256 SLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTTAAIDGIS 2104
Score = 92.7 bits (196), Expect(2) = 2e-024
Identities = 75/202 (37%), Positives = 89/202 (44%)
Frame = -2 / +3
Query: 898 TSTPVQGRESLTKSSSSGTVLVKVSLTRC*TLSCNKSLRLANFLMRNGIPSSH*SLPRRI 719
T T VQ + + S SG V +S + L+ + R A+FLM GI S * LPRR
Sbjct: 2268 TFTTVQRIGNQSTSLFSGMV*ASLSSIKFLILNWIR*CRHASFLMIRGIRSLQ**LPRRT 2447
Query: 718 TTLNFSFLESQIMFQLALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASIL 539
TT + S LE+ IMF LT +SV T IS ML *L L GQ CMTR
Sbjct: 2448 TTQSSSSLEALIMFLQEQSLTARSVTHATLISISAPMLA*LELQGQHITMFCMTRLGLPQ 2627
Query: 538 MTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRRLHLAMGGIPRRA 359
T ++ C T+GA Q L T Q R *S C RL AM P
Sbjct: 2628 TTSKNLCILCPMSTRGAPLRSQSLYLYVTLIWQLHRWEL**SMKSCLRLLRAMEESPHLE 2807
Query: 358 ASLSRSCPVCMRK*GAPCSSAE 293
SL C C PCSS +
Sbjct: 2808 QSLCHLCRSCTIMFQPPCSSVD 2873
Score = 89.5 bits (189), Expect(2) = 1e-066
Identities = 40/68 (58%), Positives = 46/68 (67%)
Frame = +1 / -1
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* G TT
Sbjct: 2871 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGTTT 2692
Query: 475 DMAVVLLW 498
++AVVLLW
Sbjct: 2691 EIAVVLLW 2668
Score = 42.3 bits (86), Expect(2) = 2e-024
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / +1
Query: 1047 CCCG*FS*MASYLEIQSICPHPITKNGND* 958
CCC MA++L+I +C H IT+NGND*
Sbjct: 2119 CCCCELKTMATHLKI*GVCTHTITQNGND* 2208
>emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE9 protein (At5g21150 gene)
Length = 2897
Score = 431 bits (936), Expect = e-119
Identities = 168/245 (68%), Positives = 203/245 (82%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
R+WPLISKY+A VRTQS KMEMID+LFKP D+G+ RE L+DFY SS RKP+ +IIF
Sbjct: 1957 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLDFYYSSENRKPEHIIIF 2136
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL Q+++ACKFLD+ W+PKFT+I+AQKNHHTKFF PDNVP G
Sbjct: 2137 RDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPG 2316
Query: 668 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 489
T++D+++CHPRNFDFY+C+HAGMIGTTRPTHYH+L+DEIGF DDLQELVHSLS+VYQRS
Sbjct: 2317 TIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQELVHSLSHVYQRS 2496
Query: 488 TTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSS 309
TTAISVVAP+CYAHLAAAQ+G +K++E+ +VPV +P+LH V +S
Sbjct: 2497 TTAISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGTVPVPPMPQLHNNVSTS 2676
Query: 308 MFFC* 294
MFFC*
Sbjct: 2677 MFFC* 2691
Score = 215 bits (465), Expect = 1e-054
Identities = 102/256 (39%), Positives = 159/256 (62%)
Frame = +3 / -3
Query: 294 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 473
S EEHG + ++Q RD +R G P MAR SLR L L+ +L C++ V N+
Sbjct: 2691 STEEHGG*NIIVQLRHRWHRDCSRCGDPSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 2512
Query: 474 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 653
* APLV + +R+H+ L+V+ + LV+Q++++ WP S NH+SM +EI+V W+TD
Sbjct: 2511 *DRSGAPLVDMGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2332
Query: 654 VVNNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTF 833
VN+ + NII SR E+ VV+LLGN C+L +P +IKK A L+ L+Q N+++L++L
Sbjct: 2331 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRL 2152
Query: 834 TNTVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNHFHFW*LGADRCSVFRD 1013
T+PE++D++ + *T V+V Q P + V + ++ +NHFHF *L A C +F D
Sbjct: 2151 AYTIPENNDVLWFPIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*D 1972
Query: 1014 KRPFTRTNHSSNRXYL 1061
+ P + ++SSN Y+
Sbjct: 1971 EWPLS*AHNSSN*WYI 1924
Score = 187 bits (402), Expect(2) = 2e-067
Identities = 100/171 (58%), Positives = 105/171 (61%)
Frame = +1 / -1
Query: 550 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFW 729
PISS R * VGLVVPI+PA *KSK G*Q LS VP GTLSG KN VW FFW
Sbjct: 2435 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2256
Query: 730 AMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSLTPSLKMMTWSGFLFPELV*KXXXX 909
A I VN G H SSRNL A +I NS+ T LN* SLTPSLK+M SGFLF EL *K
Sbjct: 2255 ATITVNFGCHVSSRNLHACII*SNSILRT*LN*DSLTPSLKIMMCSGFLFSEL**KSNKS 2076
Query: 910 XXXXXXXXXXXGLNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDXTS 1062
GL SIISI D VRT ALYFE+ GH ELTTAA D S
Sbjct: 2075 SLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTTAAIDGIS 1923
Score = 95.5 bits (202), Expect(2) = 7e-025
Identities = 76/202 (37%), Positives = 90/202 (44%)
Frame = -2 / +2
Query: 898 TSTPVQGRESLTKSSSSGTVLVKVSLTRC*TLSCNKSLRLANFLMRNGIPSSH*SLPRRI 719
T T VQ + + S SG V +S + L+ + R A+FLM GI S * LPRR
Sbjct: 2087 TFTTVQRIGNQSTSLFSGMV*ASLSSIKFLILNWIR*CRHASFLMIRGIRSLQ**LPRRT 2266
Query: 718 TTLNFSFLESQIMFQLALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASIL 539
TT + S LE+ IMF LT +SV T IS ML *L L GQ CMTR
Sbjct: 2267 TTQSSSSLEALIMFLQEQSLTARSVTHATLISISAPMLA*LELQGQHITMFCMTRLGLPQ 2446
Query: 538 MTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRRLHLAMGGIPRRA 359
T ++ C T+GA Q L T Q R *S C RL AM G P
Sbjct: 2447 TTSKNLCILCPMSTRGAPLRSQSLHLYVTLIWQLHRWEL**SMKSCLRLLRAMEGSPHLE 2626
Query: 358 ASLSRSCPVCMRK*GAPCSSAE 293
SL C C PCSS +
Sbjct: 2627 QSLCHLCRSCTIMFQPPCSSVD 2692
Score = 92.3 bits (195), Expect(2) = 2e-067
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = +1 / -1
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKNME+ T C G TGT+P V PPWL+EVSD SS F+ P AAA+ A* GATT
Sbjct: 2690 QQKNMEVETLLCSCGIGGTGTVPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 2511
Query: 475 DMAVVLLW 498
++AVVLLW
Sbjct: 2510 EIAVVLLW 2487
Score = 41.4 bits (84), Expect(2) = 7e-025
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / +3
Query: 1047 CCCG*FS*MASYLEIQSICPHPITKNGND* 958
CCC MA++L+I +C H IT+NGND*
Sbjct: 1938 CCCCELKTMATHLKI*GMCTHTITQNGND* 2027
>emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS63ZA02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 838
Score = 373 bits (809), Expect = e-102
Identities = 145/206 (70%), Positives = 170/206 (82%)
Frame = -1 / +2
Query: 911 ECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLII 732
E L+DFYTSS KRKP+ +IIFRDGVSESQFNQVLNIEL QIIEACK LD WNPKF L++
Sbjct: 2 ELLVDFYTSSNKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLV 181
Query: 731 AQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEI 552
AQKNHHTKFF P P+NVP GT++DNK+CHP+N DFY+C+HAGMIGTTRPTHYH+L+DEI
Sbjct: 182 AQKNHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEI 361
Query: 551 GFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXX 372
GF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 362 GFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGI 541
Query: 371 XXXXSVPVQELPRLHEKVRSSMFFC* 294
+ V +LPRL + V +SMFFC*
Sbjct: 542 TAPGPISVAQLPRLKDNVANSMFFC* 619
Score = 223 bits (482), Expect = 6e-057
Identities = 120/200 (60%), Positives = 132/200 (66%)
Frame = +1 / -2
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 615 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 436
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 657
MA+VLLWY KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 435 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 256
Query: 658 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSL 837
S VP GT SG G KNLV *FF A N GF F+S++LQASMI +S+F T LN* SL
Sbjct: 255 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSL 76
Query: 838 TPSLKMMTWSGFLFPELV*K 897
TPSLK+M SGFL ELV*K
Sbjct: 75 TPSLKIMICSGFLLFELV*K 16
Score = 181 bits (390), Expect = 3e-044
Identities = 87/204 (42%), Positives = 129/204 (63%)
Frame = +3 / -1
Query: 300 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 479
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 613 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 434
Query: 480 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 659
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 433 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 254
Query: 660 NNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTFTN 839
N+ NI E+ ++ILL + Q EL +P + + ASL+DL++ N+Q+L++L FT+
Sbjct: 253 NDCPWRNIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTH 74
Query: 840 TVPEDDDLVRLSLP*TGVEVNQTL 911
T+PE+ D++ SL GVE+ Q L
Sbjct: 73 TIPENYDMLWFSLIRAGVEIYQQL 2
>ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 mRNA, complete cds
Length = 2637
Score = 294 bits (637), Expect(3) = 3e-096
Identities = 119/177 (67%), Positives = 142/177 (80%)
Frame = -1 / +1
Query: 938 ETDDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEK 759
E D+G++ E ++FY +S RKP Q+IIFRDGVSESQF QVL IE+ QII+A + L E
Sbjct: 2029 EKGDNGIMNELFVEFYRTSRARKPKQIIIFRDGVSESQFEQVLKIEVDQIIKAYQRLGES 2208
Query: 758 WNPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPT 579
PKFT+I+AQKNHHTK F P+NVPAGTVVD K+ HP N+DFYMC+HAG IGT+RP
Sbjct: 2209 DVPKFTVIVAQKNHHTKLFQAKGPENVPAGTVVDTKIVHPTNYDFYMCAHAGKIGTSRPA 2388
Query: 578 HYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 408
HYH+L DEIGF+PDDLQ L+HSLSYV QRSTTA S+VAP+ YAHLAAAQV QF KF+
Sbjct: 2389 HYHVLLDEIGFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQVAQFTKFE 2559
Score = 107 bits (228), Expect(4) = 4e-044
Identities = 61/111 (54%), Positives = 67/111 (60%)
Frame = +1 / -2
Query: 541 GLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW* 720
G KPISS ** GL VPI PA HM*KS F+G L+STTVPAGT SG NLVW
Sbjct: 2426 GEKPISSSNTW**AGLEVPIFPA*AHM*KS*FVGCTILVSTTVPAGTFSGPLA*NNLVWW 2247
Query: 721 FFWAMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSLTPSLKMMTWSGF 873
FF A + VN G S R A +I S+F T N SLTPSLKM+ GF
Sbjct: 2246 FF*ATMTVNFGTSDSPRR*YAFIIWSTSIFKTCSNCDSLTPSLKMIICLGF 2094
Score = 101 bits (215), Expect(2) = 1e-022
Identities = 59/178 (33%), Positives = 100/178 (56%)
Frame = +3 / -1
Query: 396 LRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVI 575
LR+ +L EL NL CK+ V+ S++ CA LV + ER+ ++LQVI E L+ ++
Sbjct: 2571 LRYTFKLCELRNLSCCKMSVSYWSHDRSCSCATLVDIGERMDEILQVIGGETNLIK*YMV 2392
Query: 576 VSWPGSPNHSSM*THVEIEVPWMTDFVVNNSASWNIIWLSRNEKFSVVILLGNDQCELGI 755
+S S S M THV+I V + D V++S+ NI ++ VV+LL ++ E
Sbjct: 2391 MSRS*SSYFSCMSTHVKIVVCRVYDLGVHDSSCRNIFRTLSLKQLGVVVLLSHNDSEFWH 2212
Query: 756 PFLIKKFASLNDLLQLNVQHLVKLTFTNTVPEDDDLVRLSLP*TGVEVNQTLPNQTIV 929
K L +L+ ++Q L++L FT+T+PE+D+L+R P +E+ + + T++
Sbjct: 2211 IRFTKTLIRLYNLVHFDLQDLLEL*FTHTIPENDNLLRFPCPACPIELYK*FVHDTVI 2038
Score = 63.8 bits (133), Expect(3) = 3e-096
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = -1 / +1
Query: 1022 WPLISKYRASVRTQSPKMEMIDSLFKPRETDDDG 921
WPLIS+YRA+VRTQSP++EMIDSLF+P E + G
Sbjct: 1936 WPLISRYRAAVRTQSPRLEMIDSLFQPIENTEKG 2037
Score = 48.7 bits (100), Expect(4) = 4e-044
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / -2
Query: 397 SDISSNFMNCPTWAAARWA*QMGATTDMAVVLLW 498
SDI SNF+NC T AAAR A + GAT ++AVVL W
Sbjct: 2570 SDIPSNFVNCAT*AAAR*AYRTGATIEVAVVLRW 2469
Score = 46.9 bits (96), Expect(4) = 4e-044
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +1 / -2
Query: 943 GLNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDXTS 1062
G +ESIIS GD V T ALY EI+G E TTAAT+ TS
Sbjct: 2015 GWKSESIISRRGD*VLTAALYLEIKGQHFEPTTAATEGTS 1896
Score = 36.3 bits (73), Expect(3) = 3e-096
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +1
Query: 350 VQELPRLHEKVRSSMFFC* 294
V ELPRLHE V +MFFC*
Sbjct: 2581 VPELPRLHENVEGNMFFC* 2637
Score = 34.5 bits (69), Expect(4) = 4e-044
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1 / -2
Query: 295 QQKNMELLTFSCRRGSSWT 351
QQKNM TFSCRRGSS T
Sbjct: 2636 QQKNMLPSTFSCRRGSSGT 2580
Score = 27.6 bits (54), Expect(2) = 1e-022
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3 / -1
Query: 945 LKQRVNHFHFW*LGADRCSVFRDKRPFTRTNH 1040
L++R+NH W*L + C + D P TN+
Sbjct: 2013 LEERINHLQTW*LSSYSCPIP*D*GPAF*TNN 1918
>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
sequence
Length = 99345
Score = 78.0 bits (164), Expect(8) = 4e-048
Identities = 37/58 (63%), Positives = 41/58 (70%)
Frame = +1 / +1
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GAT
Sbjct: 36274 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGAT 36447
Score = 77.6 bits (163), Expect(8) = 3e-093
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -1 / -2
Query: 785 EACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
+ACK LD WNPKF L++AQKNHHTKFF P P+NVP G
Sbjct: 37115 QACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPG 36999
Score = 76.2 bits (160), Expect(8) = 3e-093
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = -1 / -1
Query: 596 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 498
GTTRPTHYH+L+DEIGF+ D+LQELVHSLSYVY
Sbjct: 36762 GTTRPTHYHVLYDEIGFSADELQELVHSLSYVY 36664
Score = 71.2 bits (149), Expect(8) = 3e-093
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = -1 / -2
Query: 470 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC* 294
VAPICYAHLAAAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 36446 VAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 36270
Score = 68.9 bits (144), Expect(8) = 3e-093
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1 / -1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIR 912
REWPLISKYRASVRTQ K EMI+SL K T+DDG+I+
Sbjct: 37617 REWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIK 37501
Score = 61.6 bits (128), Expect(8) = 3e-093
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = -1 / -3
Query: 674 AGTVVDNKVCHPRNFDFYMCSHAGMI 597
AGT++DNK+CHP+N DFY+C+HAGMI
Sbjct: 36925 AGTIIDNKICHPKNNDFYLCAHAGMI 36848
Score = 49.2 bits (101), Expect(8) = 3e-093
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1 / -2
Query: 848 RDGVSESQFNQVLNIELQQIIE 783
RDGVSESQFNQVLNIEL QIIE
Sbjct: 37259 RDGVSESQFNQVLNIELDQIIE 37194
Score = 47.3 bits (97), Expect(8) = 3e-093
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -1 / -2
Query: 914 RECLIDFYTSSGKRKPDQVIIFRDGVSE 831
RE L+DFYTSS KRKP+ +IIFR SE
Sbjct: 37409 RELLVDFYTSSNKRKPEHIIIFRYVTSE 37326
Score = 46.0 bits (94), Expect(8) = 4e-048
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = +1 / +1
Query: 670 PAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQA 783
P GT SG G KNLV *FF A N GF F+S++LQA
Sbjct: 37000 PGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQA 37113
Score = 40.0 bits (81), Expect(8) = 4e-048
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3 / +1
Query: 498 VHVRERVHQLLQVIRIEAYLVMQDVIVSWPGS 593
+H+ ERV + L+ + + L++QDV+VSW GS
Sbjct: 36664 IHIGERVDKFLKFVS*KTNLIIQDVVVSWAGS 36759
Score = 36.3 bits (73), Expect(8) = 4e-048
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +3 / +3
Query: 774 FASLNDLLQLNVQHLVKLTFTNTVP 848
F L+DL++ N+Q+L++L FT+T+P
Sbjct: 37185 FNYLDDLIKFNIQNLIELRFTHTIP 37259
Score = 35.0 bits (70), Expect(8) = 4e-048
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3 / +2
Query: 597 NHSSM*THVEIEVPWMTDFVVNN 665
NHSS+ T VEI V W+T FVVN+
Sbjct: 36848 NHSSVSTEVEIIVLWVTYFVVND 36916
Score = 33.1 bits (66), Expect(8) = 4e-048
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3 / +1
Query: 915 NQTIVISFPWLKQRVNHFHFW*LGADRCSVFRDKRPFTRTNHSS 1046
+ IV S +L + +NH L +RCS+F + P RT+H S
Sbjct: 37504 DNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTHHLS 37635
Score = 26.3 bits (51), Expect(8) = 4e-048
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 843 VPEDDDLVRLSLP*TGVEVNQTLP 914
+PE+ D++ SL GVE+ Q LP
Sbjct: 37338 IPENYDMLWFSLIRAGVEIYQQLP 37409
Score = 24.4 bits (47), Expect(8) = 4e-048
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 472 TDMAVVLLWY 501
T+MA+VLLWY
Sbjct: 36538 TEMALVLLWY 36567
Score = 22.6 bits (43), Expect(8) = 3e-093
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 500 YQRSTTAISV 471
YQRST+AISV
Sbjct: 36566 YQRSTSAISV 36537
>ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 mRNA, complete cds
Length = 2553
Score = 229 bits (494), Expect(2) = 1e-090
Identities = 90/145 (62%), Positives = 109/145 (75%)
Frame = -1 / +1
Query: 728 QKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIG 549
Q NHHTKFF P+NV GT++D+ +CH N DFY+C+HAG IGTTRPTHYH+L+DEIG
Sbjct: 2119 QINHHTKFFQTESPNNVLPGTIIDSNICHQHNNDFYLCAHAGKIGTTRPTHYHVLYDEIG 2298
Query: 548 FNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXX 369
F+ D LQELVHSLSYVYQRSTTAIS+VAPICYAHLAAAQ+ +KF++M
Sbjct: 2299 FDTDQLQELVHSLSYVYQRSTTAISLVAPICYAHLAAAQMATAMKFEDMSETSSSHGGIT 2478
Query: 368 XXXSVPVQELPRLHEKVRSSMFFC* 294
+VPV +P+L+ V SSMFFC*
Sbjct: 2479 TAGAVPVPPMPKLNTNVASSMFFC* 2553
Score = 127 bits (272), Expect(2) = 1e-090
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
REWPLISKYRA VRTQSPK+EMIDSLFKP DD I L+ + SS +KP+ +IIF
Sbjct: 1876 REWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDDQGIMRELLLDFHSSSGKKPNHIIIF 2055
Query: 848 RDGVSESQFNQVLNIELQQIIE 783
RDGVSESQFNQVLNIEL Q+++
Sbjct: 2056 RDGVSESQFNQVLNIELDQMMQ 2121
Score = 91.8 bits (194), Expect(2) = 4e-022
Identities = 52/145 (35%), Positives = 83/145 (57%)
Frame = +3 / -1
Query: 294 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 473
SA+EH + +Q RD + G P +AR*SLRH+++L+ +L ++ + N
Sbjct: 2553 SAKEH*TSNVGVQLRHGRHRDCSSCGDPAVAR*SLRHVLKLHCSCHLCSRQMSITYRRNK 2374
Query: 474 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 653
G CAPLV + +H+ L++I +++ LV++ +++ WP S N SSM T +EI V +TD
Sbjct: 2373 RDGSCAPLVDIG**MHKFLELICVKSNLVVEHMVMCWPCSSNLSSMSTKIEIVVVLVTDV 2194
Query: 654 VVNNSASWNIIWLSRNEKFSVVILL 728
VN + NII E+ VV+ L
Sbjct: 2193 AVNYCSWKNIIRAFGLEELRVVVYL 2119
Score = 89.0 bits (188), Expect(4) = 1e-046
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +1 / -2
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKN+EL T G TGT PA V PPWLDEVSD+SSNF+ AAA+ A* +GAT
Sbjct: 2552 QQKNIELATLVFSFGMGGTGTAPAVVIPPWLDEVSDMSSNFIAVAICAAAK*A*HIGATR 2373
Query: 475 DMAVVLLW 498
+MAVVL W
Sbjct: 2372 EMAVVLRW 2349
Score = 59.3 bits (123), Expect(4) = 1e-046
Identities = 27/37 (72%), Positives = 27/37 (72%)
Frame = +1 / -2
Query: 943 GLNNESIISIFGDWVRTDALYFEIRGHSRELTTAATD 1053
GL SIIS GD VRT ALYFEI GHS ELTTAA D
Sbjct: 1961 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTAAMD 1851
Score = 52.8 bits (109), Expect(4) = 1e-046
Identities = 32/58 (55%), Positives = 32/58 (55%)
Frame = +1 / -2
Query: 550 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*F 723
PISS * VGLVVPI PA *KS *Q LLS VP TL G KN VW F
Sbjct: 2297 PISS*STW*CVGLVVPIFPA*AQR*KSLLCW*QMLLSIIVPGRTLLGLSVWKNFVWWF 2124
Score = 44.6 bits (91), Expect(4) = 1e-046
Identities = 15/29 (51%), Positives = 26/29 (89%)
Frame = +3 / -1
Query: 783 LNDLLQLNVQHLVKLTFTNTVPEDDDLVR 869
L+ L+Q N+++LVKL FT+T+PE+D+++R
Sbjct: 2121 LHHLIQFNIKNLVKLRFTDTIPENDNVIR 2035
Score = 35.9 bits (72), Expect(2) = 4e-022
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 799 NSMFSTWLN*LSLTPSLKMMTWSGF 873
+S+ TWLN* SLTPSLKM+ GF
Sbjct: 2105 SSILRTWLN*DSLTPSLKMIM*FGF 2031
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
Length = 96102
Score = 74.8 bits (157), Expect(4) = 2e-028
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = +1 / +2
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
QQKN+EL T G TGT PA V PPWLDEVSD+SSNF+ AAA+ A* +GAT
Sbjct: 83585 QQKNIELATLVFSFGMGGTGTAPAVVIPPWLDEVSDMSSNFIAVAICAAAK*A*HIGAT 83761
Score = 72.1 bits (151), Expect(8) = 3e-080
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -1 / -1
Query: 596 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 501
GTTRPTHYH+L+DEIGF+ D LQELVHSLSYV
Sbjct: 84063 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 83968
Score = 71.2 bits (149), Expect(8) = 3e-080
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -1 / -3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDD 924
REWPLISKYRA VRTQSPK+EMIDSLFKP DD
Sbjct: 84937 REWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 84833
Score = 70.7 bits (148), Expect(8) = 3e-080
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = -1 / -1
Query: 470 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC*A 291
VAPICYAHLAAAQ+ +KF++M +VPV +P+L+ V SSMFFC*
Sbjct: 83760 VAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVPPMPKLNTNVASSMFFC*K 83581
Query: 290 AGN 282
N
Sbjct: 83580 NKN 83572
Score = 65.7 bits (137), Expect(8) = 3e-080
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -1 / -3
Query: 782 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
ACKFLD+K +PKFTLIIAQ NHHTKFF P+NV G
Sbjct: 84418 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPG 84305
Score = 56.1 bits (116), Expect(8) = 3e-080
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -1 / -3
Query: 680 VPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYH 570
+PAGT++D+ +CH N DFY+C+HAG I + + +Y+
Sbjct: 84229 LPAGTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 84119
Score = 54.2 bits (112), Expect(4) = 2e-028
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 943 GLNNESIISIFGDWVRTDALYFEIRGHSRELTTAA 1047
GL SIIS GD VRT ALYFEI GHS ELTT A
Sbjct: 84852 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 84956
Score = 46.4 bits (95), Expect(4) = 2e-028
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1 / +3
Query: 646 QTLLSTTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQA 783
Q + +P TL G KN VW F AMI+VNLG +F S+NL A
Sbjct: 84282 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 84419
Score = 45.1 bits (92), Expect(8) = 3e-080
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -1 / -3
Query: 848 RDGVSESQFNQVLNIELQQIIE 783
RDGVSESQFNQVLNIEL Q+++
Sbjct: 84580 RDGVSESQFNQVLNIELDQMMQ 84515
Score = 34.5 bits (69), Expect(4) = 2e-028
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 783 LNDLLQLNVQHLVKLTFTNTVP 848
L+ L+Q N+++LVKL FT+T+P
Sbjct: 84515 LHHLIQFNIKNLVKLRFTDTIP 84580
Score = 26.3 bits (51), Expect(8) = 3e-080
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1 / -1
Query: 914 RECLIDFYTSSGKR 873
RE L+DF++SSGK+
Sbjct: 84720 RELLLDFHSSSGKK 84679
Score = 23.1 bits (44), Expect(8) = 3e-080
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 500 YQRSTTAISV 471
YQRSTTAIS+
Sbjct: 83866 YQRSTTAISL 83837
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
V, complete sequence
Length = 84413
Score = 79.0 bits (166), Expect(7) = 9e-078
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = -1 / -3
Query: 524 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQ 345
L H + Y+ + + + VAP+CYAHLAAAQ+G +K++E+ +VPV
Sbjct: 12138 LQHYVQYLNSQVSLCLFAVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVP 11959
Query: 344 ELPRLHEKVRSSMFFC* 294
+P+LH V +SMFFC*
Sbjct: 11958 PMPQLHNNVSTSMFFC* 11908
Score = 78.5 bits (165), Expect(7) = 9e-078
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = -1 / -2
Query: 782 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAGTV 663
ACKFLD+ W+PKFT+I+AQKNHHTKFF PDNVP G +
Sbjct: 12766 ACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 12647
Score = 74.8 bits (157), Expect(4) = 2e-028
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = +1 / -2
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
QQKN+EL T G TGT PA V PPWLDEVSD+SSNF+ AAA+ A* +GAT
Sbjct: 70129 QQKNIELATLVFSFGMGGTGTAPAVVIPPWLDEVSDMSSNFIAVAICAAAK*A*HIGAT 69953
Score = 73.9 bits (155), Expect(5) = 1e-033
Identities = 34/61 (55%), Positives = 39/61 (63%)
Frame = +1 / +2
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* GAT
Sbjct: 11909 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATA 12088
Query: 475 D 477
+
Sbjct: 12089 N 12091
Score = 73.5 bits (154), Expect(7) = 9e-078
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -1 / -2
Query: 596 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 501
GTTRPTHYH+L+DEIGF DDLQELVHSLSYV
Sbjct: 12403 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 12308
Score = 72.1 bits (151), Expect(8) = 3e-080
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -1 / +3
Query: 596 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 501
GTTRPTHYH+L+DEIGF+ D LQELVHSLSYV
Sbjct: 69651 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 69746
Score = 71.2 bits (149), Expect(8) = 3e-080
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDD 924
REWPLISKYRA VRTQSPK+EMIDSLFKP DD
Sbjct: 68777 REWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 68881
Score = 70.7 bits (148), Expect(8) = 3e-080
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = -1 / +3
Query: 470 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC*A 291
VAPICYAHLAAAQ+ +KF++M +VPV +P+L+ V SSMFFC*
Sbjct: 69954 VAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVPPMPKLNTNVASSMFFC*K 70133
Query: 290 AGN 282
N
Sbjct: 70134 NKN 70142
Score = 68.4 bits (143), Expect(7) = 9e-078
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -1 / -1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIR 912
R+WPLISKY+A VRTQS KMEMID+LFKP D+G+ R
Sbjct: 13337 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 13221
Score = 66.6 bits (139), Expect(7) = 9e-078
Identities = 20/28 (71%), Positives = 28/28 (100%)
Frame = -1 / -3
Query: 680 VPAGTVVDNKVCHPRNFDFYMCSHAGMI 597
+PAGT++D+++CHPRNFDFY+C+HAGMI
Sbjct: 12579 LPAGTIIDSQICHPRNFDFYLCAHAGMI 12496
Score = 65.7 bits (137), Expect(8) = 3e-080
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -1 / +2
Query: 782 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
ACKFLD+K +PKFTLIIAQ NHHTKFF P+NV G
Sbjct: 69296 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPG 69409
Score = 60.2 bits (125), Expect(5) = 1e-033
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = +1 / +3
Query: 667 VPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQA 783
+P GTLSG KN VW FFWA I VN G H SSRNL A
Sbjct: 12651 LPGGTLSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHA 12767
Score = 56.1 bits (116), Expect(8) = 3e-080
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -1 / +2
Query: 680 VPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYH 570
+PAGT++D+ +CH N DFY+C+HAG I + + +Y+
Sbjct: 69485 LPAGTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 69595
Score = 54.2 bits (112), Expect(4) = 2e-028
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = +1 / -3
Query: 943 GLNNESIISIFGDWVRTDALYFEIRGHSRELTTAA 1047
GL SIIS GD VRT ALYFEI GHS ELTT A
Sbjct: 68862 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 68758
Score = 47.8 bits (98), Expect(5) = 1e-033
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 943 GLNNESIISIFGDWVRTDALYFEIRGHSRELTT 1041
GL SIISI D VRT ALYFE+ GH ELTT
Sbjct: 13252 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 13350
Score = 46.4 bits (95), Expect(4) = 2e-028
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1 / -3
Query: 646 QTLLSTTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQA 783
Q + +P TL G KN VW F AMI+VNLG +F S+NL A
Sbjct: 69432 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 69295
Score = 45.1 bits (92), Expect(7) = 9e-078
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -1 / -3
Query: 848 RDGVSESQFNQVLNIELQQIIE 783
RDGVSESQFNQVLNIEL Q+++
Sbjct: 12945 RDGVSESQFNQVLNIELDQMMQ 12880
Score = 45.1 bits (92), Expect(8) = 3e-080
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -1 / +2
Query: 848 RDGVSESQFNQVLNIELQQIIE 783
RDGVSESQFNQVLNIEL Q+++
Sbjct: 69134 RDGVSESQFNQVLNIELDQMMQ 69199
Score = 39.1 bits (79), Expect(7) = 9e-078
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -2
Query: 914 RECLIDFYTSSGKRKPDQVIIFR 846
RE L+DFY SS RKP+ +IIFR
Sbjct: 13090 RELLLDFYYSSENRKPEHIIIFR 13022
Score = 35.0 bits (70), Expect(5) = 1e-033
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3 / +1
Query: 597 NHSSM*THVEIEVPWMTDFVVNN 665
NH+SM +EI+V W+TD VN+
Sbjct: 12496 NHASMGAEIEIKVAWVTDLAVND 12564
Score = 34.5 bits (69), Expect(4) = 2e-028
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 783 LNDLLQLNVQHLVKLTFTNTVP 848
L+ L+Q N+++LVKL FT+T+P
Sbjct: 69199 LHHLIQFNIKNLVKLRFTDTIP 69134
Score = 34.5 bits (69), Expect(5) = 1e-033
Identities = 11/32 (34%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 498 VHVRERVHQLLQVIRIEAYLVMQDVIVSWPGS 593
+H+ +R+H+ L+V+ + LV+Q++++ WP S
Sbjct: 12305 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCS 12400
Score = 26.3 bits (51), Expect(8) = 3e-080
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 914 RECLIDFYTSSGKR 873
RE L+DF++SSGK+
Sbjct: 68994 RELLLDFHSSSGKK 69035
Score = 23.1 bits (44), Expect(8) = 3e-080
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 500 YQRSTTAISV 471
YQRSTTAIS+
Sbjct: 69848 YQRSTTAISL 69877
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete
sequence
Length = 112600
Score = 79.0 bits (166), Expect(7) = 5e-077
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = -1 / -1
Query: 524 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQ 345
L H + Y+ + + + VAP+CYAHLAAAQ+G +K++E+ +VPV
Sbjct: 77053 LQHYVQYLNSQVSLCLFAVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVP 76874
Query: 344 ELPRLHEKVRSSMFFC* 294
+P+LH V +SMFFC*
Sbjct: 76873 PMPQLHNNVSTSMFFC* 76823
Score = 78.5 bits (165), Expect(7) = 5e-077
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = -1 / -3
Query: 782 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAGTV 663
ACKFLD+ W+PKFT+I+AQKNHHTKFF PDNVP G +
Sbjct: 77681 ACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 77562
Score = 73.9 bits (155), Expect(5) = 4e-033
Identities = 34/61 (55%), Positives = 39/61 (63%)
Frame = +1 / +3
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* GAT
Sbjct: 76824 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATA 77003
Query: 475 D 477
+
Sbjct: 77004 N 77006
Score = 73.5 bits (154), Expect(7) = 5e-077
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -1 / -3
Query: 596 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 501
GTTRPTHYH+L+DEIGF DDLQELVHSLSYV
Sbjct: 77318 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 77223
Score = 68.4 bits (143), Expect(7) = 5e-077
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -1 / -2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIR 912
R+WPLISKY+A VRTQS KMEMID+LFKP D+G+ R
Sbjct: 78252 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 78136
Score = 66.6 bits (139), Expect(7) = 5e-077
Identities = 20/28 (71%), Positives = 28/28 (100%)
Frame = -1 / -1
Query: 680 VPAGTVVDNKVCHPRNFDFYMCSHAGMI 597
+PAGT++D+++CHPRNFDFY+C+HAGMI
Sbjct: 77494 LPAGTIIDSQICHPRNFDFYLCAHAGMI 77411
Score = 60.2 bits (125), Expect(5) = 4e-033
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = +1 / +1
Query: 667 VPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQA 783
+P GTLSG KN VW FFWA I VN G H SSRNL A
Sbjct: 77566 LPGGTLSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHA 77682
Score = 47.8 bits (98), Expect(5) = 4e-033
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +1 / +2
Query: 943 GLNNESIISIFGDWVRTDALYFEIRGHSRELTT 1041
GL SIISI D VRT ALYFE+ GH ELTT
Sbjct: 78167 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 78265
Score = 45.1 bits (92), Expect(7) = 5e-077
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -1 / -1
Query: 848 RDGVSESQFNQVLNIELQQIIE 783
RDGVSESQFNQVLNIEL Q+++
Sbjct: 77860 RDGVSESQFNQVLNIELDQMMQ 77795
Score = 39.1 bits (79), Expect(7) = 5e-077
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 914 RECLIDFYTSSGKRKPDQVIIFR 846
RE L+DFY SS RKP+ +IIFR
Sbjct: 78005 RELLLDFYYSSENRKPEHIIIFR 77937
Score = 35.0 bits (70), Expect(5) = 4e-033
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3 / +2
Query: 597 NHSSM*THVEIEVPWMTDFVVNN 665
NH+SM +EI+V W+TD VN+
Sbjct: 77411 NHASMGAEIEIKVAWVTDLAVND 77479
Score = 34.5 bits (69), Expect(5) = 4e-033
Identities = 11/32 (34%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 498 VHVRERVHQLLQVIRIEAYLVMQDVIVSWPGS 593
+H+ +R+H+ L+V+ + LV+Q++++ WP S
Sbjct: 77220 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCS 77315
>gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB75ZH02 3PRIM, mRNA sequence
Length = 922
Score = 202 bits (435), Expect(2) = 7e-063
Identities = 79/120 (65%), Positives = 95/120 (79%)
Frame = -1 / -1
Query: 974 KMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQ 795
K +MI SL K T +DG+I+E ++DFYTSS KRKP+ +II DGVSESQ NQVLNIEL
Sbjct: 889 KAKMI*SLVKKNGTKEDGIIQELMVDFYTSSNKRKPEHIIILFDGVSESQLNQVLNIELD 710
Query: 794 QIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMC 615
QIIEA K LD WNPKF L++AQKNHHTKFF P P+NVP GT++DNK+ HP+N DFY+C
Sbjct: 709 QIIEARKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKIFHPKNNDFYLC 530
Score = 171 bits (369), Expect(2) = 8e-045
Identities = 71/116 (61%), Positives = 85/116 (73%)
Frame = -1 / -3
Query: 641 PRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAP 462
P+ F HAGMIGTTRPTHYH+L+DEIG + D+LQELVHSLSYVYQRST+AISVVAP
Sbjct: 557 PKEQ*FLPLCHAGMIGTTRPTHYHVLYDEIGLSADELQELVHSLSYVYQRSTSAISVVAP 378
Query: 461 ICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC* 294
ICYAHLAAAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 377 ICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 210
Score = 121 bits (259), Expect(2) = 4e-050
Identities = 61/104 (58%), Positives = 68/104 (65%)
Frame = +1 / +1
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 214 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 393
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPA 609
MA+VLLWY +PISS R **VG VVPIIPA
Sbjct: 394 MALVLLWYT*ESEWTSS*SSSAERPISSYRTW**VGRVVPIIPA 525
Score = 100 bits (212), Expect(2) = 4e-050
Identities = 55/92 (59%), Positives = 63/92 (68%)
Frame = +1 / +3
Query: 622 *KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQASMICCN 801
*KS F G* LLS VP GT SG G KNLV *FF A N GF F+S++L+ASMI +
Sbjct: 537 *KSLFFG*NILLSMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLRASMI*SS 716
Query: 802 SMFSTWLN*LSLTPSLKMMTWSGFLFPELV*K 897
S+F T L+* SLTPS +MM SGFL ELV*K
Sbjct: 717 SIFRT*LS*DSLTPSKRMMICSGFLLFELV*K 812
Score = 95.0 bits (201), Expect(2) = 4e-040
Identities = 44/104 (42%), Positives = 64/104 (61%)
Frame = +3 / +3
Query: 300 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 479
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 216 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 395
Query: 480 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM 611
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+
Sbjct: 396 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSV 527
Score = 93.2 bits (197), Expect(2) = 4e-040
Identities = 46/117 (39%), Positives = 71/117 (60%)
Frame = +3 / +2
Query: 615 THVEIEVPWMTDFVVNNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDL 794
T VEI V W+ FVVN+ NI E+ ++ILL + Q EL +P + + ASL+DL
Sbjct: 530 TEVEIIVLWVKYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDL 709
Query: 795 LQLNVQHLVKLTFTNTVPEDDDLVRLSLP*TGVEVNQTLPNQTIVISFPWLKQRVNH 965
++ N+Q+L++L FT+T+ E+DD++ SL GVE+ L I S +L + +NH
Sbjct: 710 IKFNIQNLIELRFTHTIKENDDMLWFSLIRAGVEIYHQLLYNAIFFSSIFLYKGLNH 880
Score = 62.0 bits (129), Expect(2) = 7e-063
Identities = 39/76 (51%), Positives = 41/76 (53%)
Frame = -2 / -1
Query: 607 LE*LGLPGQLTITSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRL 428
LE*L LP QLT TSCM R L R+ TRS CTK A P+ LL SA T Q L
Sbjct: 523 LE*LELPAQLTTTSCMMRLVFQLTNFRNLSTRSPMCTKEAPVPFLLLRRSAMLTWQLLSL 344
Query: 427 GSS*SSTRCRRLHLAM 380
G S*S R H AM
Sbjct: 343 GRS*SLKISLRHHQAM 296
Score = 31.8 bits (63), Expect(2) = 8e-045
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -3 / -3
Query: 936 N**RWSDSGVSD*LLHQFREEKA*PSHHLQGRC**KSV*PGAEH*VATNH*GLQIS**EM 757
N* RW + V LHQ EK HH C * S G+E+* ++H G Q ++
Sbjct: 851 N*RRWHYTRVDGRFLHQLE*EKTRAYHHSL*WCE*ISTQSGSEY*T*SDHRGSQALRRKL 672
Query: 756 ESQV 745
E +V
Sbjct: 671 EPKV 660
>gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL49a09F 3', mRNA
sequence
Length = 611
Score = 230 bits (496), Expect = 8e-059
Identities = 88/137 (64%), Positives = 108/137 (78%)
Frame = -1 / -2
Query: 704 FIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQE 525
F P P+NVP GT++DNK+CHP+ DFY+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQE
Sbjct: 610 FQPTSPENVPPGTIIDNKICHPKTNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQE 431
Query: 524 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQ 345
LVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++ + V
Sbjct: 430 LVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVA 251
Query: 344 ELPRLHEKVRSSMFFC* 294
+LPRL + V +SMFFC*
Sbjct: 250 QLPRLKDNVANSMFFC* 200
Score = 147 bits (316), Expect = 5e-034
Identities = 78/136 (57%), Positives = 84/136 (61%)
Frame = +1 / +3
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 204 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 383
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 657
MA+VLLWY KPISS R **VG VVPIIPA *KS G* LL
Sbjct: 384 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLVFG*HILL 563
Query: 658 STTVPAGTLSGFPGMK 705
S VP GT SG G K
Sbjct: 564 SMIVPGGTFSGDVGWK 611
Score = 114 bits (243), Expect = 6e-024
Identities = 56/128 (43%), Positives = 78/128 (60%)
Frame = +3 / +2
Query: 300 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 479
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 206 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 385
Query: 480 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 659
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI W+T FVV
Sbjct: 386 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIGLWVTYFVV 565
Query: 660 NNSASWNI 683
N+ NI
Sbjct: 566 NDCPWRNI 589
>gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL27f05F 3', mRNA
sequence
Length = 544
Score = 229 bits (494), Expect = 1e-058
Identities = 87/132 (65%), Positives = 107/132 (81%)
Frame = -1 / -3
Query: 689 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 510
P+NVP GT++DNK+CHP+N DFY+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQELVHSL
Sbjct: 542 PENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSL 363
Query: 509 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRL 330
SYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++ + V +LPRL
Sbjct: 362 SYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRL 183
Query: 329 HEKVRSSMFFC* 294
+ V +SMFFC*
Sbjct: 182 KDNVANSMFFC* 147
Score = 148 bits (318), Expect = 3e-034
Identities = 77/131 (58%), Positives = 83/131 (63%)
Frame = +1 / +1
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 151 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 330
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 657
MA+VLLWY KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 331 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 510
Query: 658 STTVPAGTLSG 690
S VP GT SG
Sbjct: 511 SMIVPGGTFSG 543
Score = 117 bits (250), Expect = 6e-025
Identities = 57/128 (44%), Positives = 79/128 (61%)
Frame = +3 / +3
Query: 300 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 479
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 153 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 332
Query: 480 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 659
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 333 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 512
Query: 660 NNSASWNI 683
N+ NI
Sbjct: 513 NDCPWRNI 536
>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete
sequence
Length = 96801
Score = 73.0 bits (153), Expect(6) = 6e-058
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -1 / +2
Query: 596 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAIS 474
GT+RP HYH+L DEIGF+PDDLQ L+HSLSYV S T+I+
Sbjct: 50789 GTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYV*VHSLTSIT 50911
Score = 63.8 bits (133), Expect(6) = 6e-058
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = -1 / +2
Query: 1022 WPLISKYRASVRTQSPKMEMIDSLFKPRETDDDG 921
WPLIS+YRA+VRTQSP++EMIDSLF+P E + G
Sbjct: 49904 WPLISRYRAAVRTQSPRLEMIDSLFQPIENTEKG 50005
Score = 55.1 bits (114), Expect(6) = 6e-058
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / +3
Query: 785 EACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
+A + L E PKFT+I+AQKNHHTK F P+NVPAG
Sbjct: 50424 QAYQRLGESDVPKFTVIVAQKNHHTKLFQAKGPENVPAG 50540
Score = 53.8 bits (111), Expect(6) = 6e-058
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1 / +1
Query: 674 AGTVVDNKVCHPRNFDFYMCSHAGMI 597
+GTVVD K+ HP N+DFYMC+HAG I
Sbjct: 50626 SGTVVDTKIVHPTNYDFYMCAHAGKI 50703
Score = 40.5 bits (82), Expect(6) = 6e-058
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 848 RDGVSESQFNQVLNIELQQIIE 783
RDGVSESQF QVL IE+ QII+
Sbjct: 50259 RDGVSESQFEQVLKIEVDQIIK 50324
Score = 33.1 bits (66), Expect(6) = 6e-058
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1 / +1
Query: 911 ECLIDFYTSSGKRKPDQVIIFR 846
E ++FY +S RKP Q+IIFR
Sbjct: 50107 ELFVEFYRTSRARKPKQIIIFR 50172
>ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G27880 mRNA, complete cds
Length = 2994
Score = 142 bits (305), Expect(4) = 1e-055
Identities = 56/133 (42%), Positives = 78/133 (58%)
Frame = -1 / +1
Query: 692 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 513
K N+ GTVVD K+CHP FDFY+ SHAG+ GT+RP HYH+L DE GF D LQ L ++
Sbjct: 2596 KSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNN 2775
Query: 512 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPR 333
L Y Y R T ++S+V P YAHLAA + +++ + + +LP
Sbjct: 2776 LCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPA 2955
Query: 332 LHEKVRSSMFFC* 294
+ + V+ MF+C*
Sbjct: 2956 IKDNVKEVMFYC* 2994
Score = 72.5 bits (152), Expect(4) = 1e-055
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -1 / +1
Query: 869 PDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
P ++I +RDGVSE QF+QVL E+ I +AC L E + P+ T +I QK HHT+ F
Sbjct: 2395 PQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 2562
Score = 39.1 bits (79), Expect(4) = 1e-055
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -1 / +1
Query: 1025 EWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQV 858
+WP I+KYR V Q+ + E+I L+K + GL+ LI + + +R Q+
Sbjct: 2227 DWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIAFRRATGQI 2394
Score = 22.1 bits (42), Expect(4) = 1e-055
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +3
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 2205 CCCCG 2219
>emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL43ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1092
Score = 142 bits (305), Expect(4) = 8e-054
Identities = 56/133 (42%), Positives = 78/133 (58%)
Frame = -1 / +2
Query: 692 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 513
K N+ GTVVD K+CHP FDFY+ SHAG+ GT+RP HYH+L DE GF D LQ L ++
Sbjct: 512 KSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNN 691
Query: 512 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPR 333
L Y Y R T ++S+V P YAHLAA + +++ + + +LP
Sbjct: 692 LCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPA 871
Query: 332 LHEKVRSSMFFC* 294
+ + V+ MF+C*
Sbjct: 872 IKDNVKEVMFYC* 910
Score = 72.5 bits (152), Expect(4) = 8e-054
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -1 / +2
Query: 869 PDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
P ++I +RDGVSE QF+QVL E+ I +AC L E + P+ T +I QK HHT+ F
Sbjct: 311 PQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 478
Score = 33.1 bits (66), Expect(4) = 8e-054
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 1025 EWPLISKYRASVRTQSPKMEMIDSLFK 945
+WP I+KYR V Q+ + E+I L+K
Sbjct: 144 DWPEINKYRGLVSAQAHREEIIQDLYK 224
Score = 22.1 bits (42), Expect(4) = 8e-054
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +2
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 122 CCCCG 136
>ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.2 mRNA, complete cds
Length = 3489
Score = 129 bits (276), Expect(4) = 5e-050
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +3
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2877 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3056
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 3057 TYARCTRSVSIVPPAYYAHLAA 3122
Score = 71.6 bits (150), Expect(4) = 5e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = -1 / +3
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 726
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 2631 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2810
Query: 725 KNHHTKFFIPGKPD 684
K HHT+ F D
Sbjct: 2811 KRHHTRLFAQNHND 2852
Score = 34.5 bits (69), Expect(4) = 5e-050
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1 / +3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLI 915
++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 2496 QDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 2609
Score = 22.1 bits (42), Expect(4) = 5e-050
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +2
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 2477 CCCCG 2491
>ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.1 mRNA, complete cds
Length = 3483
Score = 129 bits (276), Expect(4) = 5e-050
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +3
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2871 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3050
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 3051 TYARCTRSVSIVPPAYYAHLAA 3116
Score = 71.6 bits (150), Expect(4) = 5e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = -1 / +3
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 726
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 2625 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2804
Query: 725 KNHHTKFFIPGKPD 684
K HHT+ F D
Sbjct: 2805 KRHHTRLFAQNHND 2846
Score = 34.5 bits (69), Expect(4) = 5e-050
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1 / +3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLI 915
++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 2490 QDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 2603
Score = 22.1 bits (42), Expect(4) = 5e-050
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +2
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 2471 CCCCG 2485
>gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein (AGO1) mRNA, complete cds
Length = 3473
Score = 129 bits (276), Expect(4) = 5e-050
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +1
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2848 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3027
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 3028 TYARCTRSVSIVPPAYYAHLAA 3093
Score = 71.6 bits (150), Expect(4) = 5e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = -1 / +1
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 726
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 2602 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2781
Query: 725 KNHHTKFFIPGKPD 684
K HHT+ F D
Sbjct: 2782 KRHHTRLFAQNHND 2823
Score = 34.5 bits (69), Expect(4) = 5e-050
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLI 915
++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 2467 QDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 2580
Score = 22.1 bits (42), Expect(4) = 5e-050
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +3
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 2448 CCCCG 2462
>gb|BT000941.1| Arabidopsis thaliana clone C105223 putative leaf development protein
Argonaute (At1g48410) mRNA, complete cds
Length = 3177
Score = 129 bits (276), Expect(4) = 5e-050
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +1
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2722 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2901
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 2902 TYARCTRSVSIVPPAYYAHLAA 2967
Score = 71.6 bits (150), Expect(4) = 5e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = -1 / +1
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 726
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 2476 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2655
Query: 725 KNHHTKFFIPGKPD 684
K HHT+ F D
Sbjct: 2656 KRHHTRLFAQNHND 2697
Score = 34.5 bits (69), Expect(4) = 5e-050
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLI 915
++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 2341 QDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 2454
Score = 22.1 bits (42), Expect(4) = 5e-050
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +3
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 2322 CCCCG 2336
>gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence
Length = 2764
Score = 129 bits (276), Expect(4) = 5e-050
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +2
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2120 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2299
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 2300 TYARCTRSVSIVPPAYYAHLAA 2365
Score = 71.6 bits (150), Expect(4) = 5e-050
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = -1 / +2
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQ 726
L+ + S KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ Q
Sbjct: 1874 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQ 2053
Query: 725 KNHHTKFFIPGKPD 684
K HHT+ F D
Sbjct: 2054 KRHHTRLFAQNHND 2095
Score = 34.5 bits (69), Expect(4) = 5e-050
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLI 915
++WP I+KY V Q+ + E+I LFK + G++
Sbjct: 1739 QDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVV 1852
Score = 22.1 bits (42), Expect(4) = 5e-050
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +1
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 1720 CCCCG 1734
>ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G43810 (ZLL) mRNA, complete cds
Length = 3330
Score = 129 bits (276), Expect(3) = 7e-048
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = -1 / +3
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 2658 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2837
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2838 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2942
Score = 72.1 bits (151), Expect(3) = 7e-048
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = -1 / +3
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 2481 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2654
Score = 30.9 bits (61), Expect(3) = 7e-048
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1 / +3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFK 945
++WP ++KY V Q+ + E+I L+K
Sbjct: 2316 QDWPEVTKYAGLVCAQAHRQELIQDLYK 2399
>emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwille protein
Length = 3323
Score = 129 bits (276), Expect(3) = 7e-048
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = -1 / +3
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 2658 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2837
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2838 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2942
Score = 72.1 bits (151), Expect(3) = 7e-048
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = -1 / +3
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 2481 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2654
Score = 30.9 bits (61), Expect(3) = 7e-048
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1 / +3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFK 945
++WP ++KY V Q+ + E+I L+K
Sbjct: 2316 QDWPEVTKYAGLVCAQAHRQELIQDLYK 2399
>emb|AX505737.1| Sequence 432 from Patent WO0216655
Length = 2967
Score = 129 bits (276), Expect(3) = 7e-048
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = -1 / +1
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 2530 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2709
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2710 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2814
Score = 72.1 bits (151), Expect(3) = 7e-048
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = -1 / +1
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 2353 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2526
Score = 30.9 bits (61), Expect(3) = 7e-048
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFK 945
++WP ++KY V Q+ + E+I L+K
Sbjct: 2188 QDWPEVTKYAGLVCAQAHRQELIQDLYK 2271
>emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS34ZG07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3188
Score = 129 bits (276), Expect(5) = 2e-046
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +3
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2598 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2777
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 2778 TYARCTRSVSIVPPAYYAHLAA 2843
Score = 45.1 bits (92), Expect(5) = 2e-046
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -1 / +2
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 777
L+ + S KP ++I +RDGVSE QF QVL EL I +AC
Sbjct: 2351 LLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKAC 2479
Score = 35.4 bits (71), Expect(5) = 2e-046
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLI 915
++WP I+KY V Q+ + E+I LFK + GL+
Sbjct: 2216 QDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGLL 2329
Score = 30.9 bits (61), Expect(5) = 2e-046
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1 / +1
Query: 770 LDEKWNPKFTLIIAQKNHHTKFFIPGKPD 684
L+ + P T ++ QK HHT+ F D
Sbjct: 2485 LEAGYQPPVTFVVVQKRHHTRLFAQNHND 2571
Score = 22.1 bits (42), Expect(5) = 2e-046
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +1
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 2197 CCCCG 2211
>gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL43g03F 3', mRNA
sequence
Length = 484
Score = 178 bits (384), Expect = 2e-043
Identities = 71/109 (65%), Positives = 86/109 (78%)
Frame = -1 / -1
Query: 620 MCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLA 441
+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLA
Sbjct: 484 LCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLA 305
Query: 440 AAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC* 294
AAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 304 AAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 158
Score = 122 bits (262), Expect = 1e-026
Identities = 62/104 (59%), Positives = 68/104 (65%)
Frame = +1 / +3
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 162 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 341
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPA 609
MA+VLLWY KPISS R **VG VVPIIPA
Sbjct: 342 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA 473
>gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P13212
5-PRIME, mRNA sequence
Length = 775
Score = 129 bits (276), Expect(2) = 2e-042
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +3
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 204 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 383
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 384 TYARCTRSVSIVPPAYYAHLAA 449
Score = 66.6 bits (139), Expect(2) = 2e-042
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = -1 / +3
Query: 860 VIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPD 684
+I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F D
Sbjct: 3 IIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQNHND 179
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 132 bits (282), Expect(3) = 3e-041
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = -1 / -2
Query: 737 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 558
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 45332 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 45153
Query: 557 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 45152 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 45033
Score = 53.3 bits (110), Expect(3) = 3e-041
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -1 / -2
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 777
L+D + + K+ P+++I FRDGVSE+QF +VL ELQ I AC
Sbjct: 45500 LLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTAC 45372
Score = 24.4 bits (47), Expect(3) = 3e-041
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 341 LPRLHEKVRSSMFFC* 294
LP+L + V++ MF+C*
Sbjct: 44933 LPKLSDNVKNLMFYC* 44886
>ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1G69440 (AGO7) mRNA,
complete cds
Length = 3163
Score = 132 bits (282), Expect(3) = 3e-041
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = -1 / +1
Query: 737 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 558
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 2677 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 2856
Query: 557 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 2857 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 2976
Score = 53.3 bits (110), Expect(3) = 3e-041
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -1 / +1
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 777
L+D + + K+ P+++I FRDGVSE+QF +VL ELQ I AC
Sbjct: 2509 LLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTAC 2637
Score = 24.4 bits (47), Expect(3) = 3e-041
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1 / +1
Query: 341 LPRLHEKVRSSMFFC* 294
LP+L + V++ MF+C*
Sbjct: 3076 LPKLSDNVKNLMFYC* 3123
>gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds
Length = 3161
Score = 132 bits (282), Expect(3) = 3e-041
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = -1 / +1
Query: 737 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 558
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 2677 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 2856
Query: 557 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 2857 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 2976
Score = 53.3 bits (110), Expect(3) = 3e-041
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -1 / +1
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 777
L+D + + K+ P+++I FRDGVSE+QF +VL ELQ I AC
Sbjct: 2509 LLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTAC 2637
Score = 24.4 bits (47), Expect(3) = 3e-041
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1 / +1
Query: 341 LPRLHEKVRSSMFFC* 294
LP+L + V++ MF+C*
Sbjct: 3076 LPKLSDNVKNLMFYC* 3123
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 116 bits (249), Expect(2) = 2e-033
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = -1 / +3
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
NVP+GTVVD KV HP +DFY+CSH G IGT++PTHY+ L DE+GF D +Q+L+ + +
Sbjct: 11193474 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 11193653
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
+ R T +S+V P+ YA + A
Sbjct: 11193654 TFTRCTKPVSLVPPVYYADMVA 11193719
Score = 115 bits (246), Expect(3) = 6e-040
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = -1 / +2
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
NVP+GTVVD + HP +DFY+CS G IGT++PTHY++L DEIGFN + +Q+L+ L +
Sbjct: 11200679 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 11200858
Query: 503 VYQRSTTAISVVAPICYAHLAAAQ 432
+ R T +++V P+ YA AA++
Sbjct: 11200859 TFTRCTKPVALVPPVSYADKAASR 11200930
Score = 54.7 bits (113), Expect(3) = 6e-040
Identities = 18/39 (46%), Positives = 33/39 (84%)
Frame = -1 / +2
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 789
LI+ ++ + +++P++++IFRDGVS+ QF+ VLN+ELQ +
Sbjct: 11200445 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 11200561
Score = 48.3 bits (99), Expect(2) = 2e-033
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = -1 / +3
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 789
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 11193243 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 11193359
Score = 35.0 bits (70), Expect(3) = 6e-040
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1 / +2
Query: 758 WNPKFTLIIAQKNHHTKFF 702
+NP+ T+I+AQK H T+FF
Sbjct: 11200586 YNPQITVIVAQKRHQTRFF 11200642
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I,
complete sequence
Length = 87618
Score = 116 bits (249), Expect(3) = 1e-034
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = -1 / +3
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
NVP+GTVVD KV HP +DFY+CSH G IGT++PTHY+ L DE+GF D +Q+L+ + +
Sbjct: 25185 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 25364
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
+ R T +S+V P+ YA + A
Sbjct: 25365 TFTRCTKPVSLVPPVYYADMVA 25430
Score = 115 bits (246), Expect(3) = 7e-040
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = -1 / +2
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
NVP+GTVVD + HP +DFY+CS G IGT++PTHY++L DEIGFN + +Q+L+ L +
Sbjct: 32390 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 32569
Query: 503 VYQRSTTAISVVAPICYAHLAAAQ 432
+ R T +++V P+ YA AA++
Sbjct: 32570 TFTRCTKPVALVPPVSYADKAASR 32641
Score = 54.7 bits (113), Expect(3) = 7e-040
Identities = 18/39 (46%), Positives = 33/39 (84%)
Frame = -1 / +2
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 789
LI+ ++ + +++P++++IFRDGVS+ QF+ VLN+ELQ +
Sbjct: 32156 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 32272
Score = 48.3 bits (99), Expect(3) = 1e-034
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = -1 / +3
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 789
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 24954 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 25070
Score = 35.0 bits (70), Expect(3) = 7e-040
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1 / +2
Query: 758 WNPKFTLIIAQKNHHTKFF 702
+NP+ T+I+AQK H T+FF
Sbjct: 32297 YNPQITVIVAQKRHQTRFF 32353
Score = 22.1 bits (42), Expect(3) = 1e-034
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +2
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 24839 CCCCG 24853
>ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G31290 mRNA, complete cds
Length = 3585
Score = 115 bits (246), Expect(3) = 7e-040
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = -1 / +1
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
NVP+GTVVD + HP +DFY+CS G IGT++PTHY++L DEIGFN + +Q+L+ L +
Sbjct: 3166 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 3345
Query: 503 VYQRSTTAISVVAPICYAHLAAAQ 432
+ R T +++V P+ YA AA++
Sbjct: 3346 TFTRCTKPVALVPPVSYADKAASR 3417
Score = 54.7 bits (113), Expect(3) = 7e-040
Identities = 18/39 (46%), Positives = 33/39 (84%)
Frame = -1 / +1
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 789
LI+ ++ + +++P++++IFRDGVS+ QF+ VLN+ELQ +
Sbjct: 2932 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 3048
Score = 35.0 bits (70), Expect(3) = 7e-040
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1 / +1
Query: 758 WNPKFTLIIAQKNHHTKFF 702
+NP+ T+I+AQK H T+FF
Sbjct: 3073 YNPQITVIVAQKRHQTRFF 3129
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 132 bits (282), Expect(2) = 2e-039
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = -1 / -3
Query: 737 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 558
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 10344207 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 10344028
Query: 557 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 10344027 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 10343908
Score = 53.3 bits (110), Expect(2) = 2e-039
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -1 / -3
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEAC 777
L+D + + K+ P+++I FRDGVSE+QF +VL ELQ I AC
Sbjct: 10344375 LLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTAC 10344247
>gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769F213Q 5-PRIME, mRNA sequence
Length = 532
Score = 128 bits (275), Expect(2) = 6e-039
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = -1 / +3
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 144 NNHRDKNSTHRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 323
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 324 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 428
Score = 55.1 bits (114), Expect(2) = 6e-039
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = -1 / +3
Query: 839 VSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
VSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 3 VSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 140
>gb|T21581.1|T21581 3589 Lambda-PRL2 Arabidopsis thaliana cDNA clone 95A9T7, mRNA
sequence
Length = 507
Score = 136 bits (292), Expect(2) = 1e-036
Identities = 57/75 (76%), Positives = 63/75 (84%)
Frame = -1 / +3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQVIIF 849
REWPLISKYRASVRTQ K EMI SL K T+DDG+I+E L+DFYTSS KRKP+ +II
Sbjct: 117 REWPLISKYRASVRTQPSKAEMIXSLVKKNGTEDDGIIKELLVDFYTSSNKRKPEHIIIX 296
Query: 848 RDGVSESQFNQVLNI 804
RDGVSESQFNQVLNI
Sbjct: 297 RDGVSESQFNQVLNI 341
Score = 40.0 bits (81), Expect(2) = 1e-036
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1 / +2
Query: 800 LQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
L Q I A K LD W+PK + QK+HH + F
Sbjct: 347 LIQXIXAXKLLDANWDPKXXXVCGQKDHHXQVF 445
>gb|CA781259.1|CA781259 014A08AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 569
Score = 87.2 bits (184), Expect(3) = 2e-035
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = -1 / +2
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGF 546
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 389 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPGHYHVLWDENNF 565
Score = 72.1 bits (151), Expect(3) = 2e-035
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = -1 / +2
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T I+ QK HHT+ F
Sbjct: 212 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 385
Score = 30.9 bits (61), Expect(3) = 2e-035
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFK 945
++WP ++KY V Q+ + E+I L+K
Sbjct: 47 QDWPEVTKYAGLVCAQAHRQELIQDLYK 130
>ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2) mRNA, complete cds
Length = 3042
Score = 116 bits (249), Expect(3) = 1e-034
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = -1 / +1
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
NVP+GTVVD KV HP +DFY+CSH G IGT++PTHY+ L DE+GF D +Q+L+ + +
Sbjct: 2623 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 2802
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
+ R T +S+V P+ YA + A
Sbjct: 2803 TFTRCTKPVSLVPPVYYADMVA 2868
Score = 48.3 bits (99), Expect(3) = 1e-034
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = -1 / +1
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 789
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 2392 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 2508
Score = 22.1 bits (42), Expect(3) = 1e-034
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +3
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 2277 CCCCG 2291
>dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unknown protein, complete
cds, clone: RAFL19-70-F03
Length = 1950
Score = 116 bits (249), Expect(3) = 1e-034
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = -1 / +3
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
NVP+GTVVD KV HP +DFY+CSH G IGT++PTHY+ L DE+GF D +Q+L+ + +
Sbjct: 1299 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 1478
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
+ R T +S+V P+ YA + A
Sbjct: 1479 TFTRCTKPVSLVPPVYYADMVA 1544
Score = 48.3 bits (99), Expect(3) = 1e-034
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = -1 / +3
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 789
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 1068 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 1184
Score = 22.1 bits (42), Expect(3) = 1e-034
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +2
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 953 CCCCG 967
>gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complete cds
Length = 1623
Score = 116 bits (249), Expect(3) = 1e-034
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = -1 / +1
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
NVP+GTVVD KV HP +DFY+CSH G IGT++PTHY+ L DE+GF D +Q+L+ + +
Sbjct: 1204 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 1383
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
+ R T +S+V P+ YA + A
Sbjct: 1384 TFTRCTKPVSLVPPVYYADMVA 1449
Score = 48.3 bits (99), Expect(3) = 1e-034
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = -1 / +1
Query: 905 LIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQI 789
L+ + + ++P++++IFRDGVS++QF+ VLN+EL +
Sbjct: 973 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVELLDV 1089
Score = 22.1 bits (42), Expect(3) = 1e-034
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3 / +3
Query: 1050 CCCCG 1036
CCCCG
Sbjct: 858 CCCCG 872
>gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M35A4 5', mRNA sequence
Length = 394
Score = 95.9 bits (203), Expect(2) = 1e-033
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1 / +1
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 513
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++
Sbjct: 223 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNN 393
Score = 70.7 bits (148), Expect(2) = 1e-033
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = -1 / +1
Query: 872 KPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPG 693
KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 10 KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQN 189
Query: 692 KPD 684
D
Sbjct: 190 HND 198
>emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL91ZD02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 728
Score = 129 bits (276), Expect(2) = 3e-033
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +1
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 127 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 306
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 307 TYARCTRSVSIVPPAYYAHLAA 372
Score = 35.9 bits (72), Expect(2) = 3e-033
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1 / +3
Query: 782 ACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPD 684
AC L+ + P T ++ QK HHT+ F D
Sbjct: 3 ACSSLEAGYQPPVTFVVVQKRHHTRLFAQNHND 101
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete
sequence
Length = 94884
Score = 63.8 bits (133), Expect(5) = 1e-032
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = -1 / -1
Query: 854 IFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
++ DGVSE QF+QVL E+ I +AC L E + P+ T +I QK HHT+ F
Sbjct: 85149 LYSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 84997
Score = 51.0 bits (105), Expect(5) = 1e-032
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1 / -1
Query: 674 AGTVVDNKVCHPRNFDFYMCSHAGM 600
+GTVVD K+CHP FDFY+ SHAG+
Sbjct: 84861 SGTVVDTKICHPNEFDFYLNSHAGI 84787
Score = 50.1 bits (103), Expect(5) = 1e-032
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -1 / -3
Query: 596 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAI 477
GT+RP HYH+L DE GF D LQ L ++L Y + +T I
Sbjct: 84697 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT*ETTTLYI 84578
Score = 46.4 bits (95), Expect(5) = 1e-032
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1 / -3
Query: 500 YQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEK 321
Y R T ++S+V P YAHLAA + +++ + + +LP + +
Sbjct: 84514 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPAIKDN 84335
Query: 320 VRSSMFFC* 294
V+ MF+C*
Sbjct: 84334 VKEVMFYC* 84308
Score = 37.7 bits (76), Expect(5) = 1e-032
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 1025 EWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLI 900
+WP I+KYR V Q+ + E+I L+K + GL+ LI
Sbjct: 85491 DWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 85366
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
sequence
Length = 118196
Score = 63.8 bits (133), Expect(5) = 2e-032
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = -1 / -1
Query: 854 IFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
++ DGVSE QF+QVL E+ I +AC L E + P+ T +I QK HHT+ F
Sbjct: 3806 LYSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 3654
Score = 51.0 bits (105), Expect(5) = 2e-032
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1 / -1
Query: 674 AGTVVDNKVCHPRNFDFYMCSHAGM 600
+GTVVD K+CHP FDFY+ SHAG+
Sbjct: 3518 SGTVVDTKICHPNEFDFYLNSHAGI 3444
Score = 50.1 bits (103), Expect(5) = 2e-032
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -1 / -3
Query: 596 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAI 477
GT+RP HYH+L DE GF D LQ L ++L Y + +T I
Sbjct: 3354 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT*ETTTLYI 3235
Score = 46.4 bits (95), Expect(5) = 2e-032
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1 / -3
Query: 500 YQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEK 321
Y R T ++S+V P YAHLAA + +++ + + +LP + +
Sbjct: 3171 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPAIKDN 2992
Query: 320 VRSSMFFC* 294
V+ MF+C*
Sbjct: 2991 VKEVMFYC* 2965
Score = 37.7 bits (76), Expect(5) = 2e-032
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 1025 EWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLI 900
+WP I+KYR V Q+ + E+I L+K + GL+ LI
Sbjct: 4148 DWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 4023
>gb|AV523023.1|AV523023 AV523023 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL13c04F 3', mRNA
sequence
Length = 462
Score = 138 bits (297), Expect = 2e-031
Identities = 57/93 (61%), Positives = 70/93 (75%)
Frame = -1 / -3
Query: 572 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXX 393
H+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 460 HVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSET 281
Query: 392 XXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC* 294
+ V +LPRL + V +SMFFC*
Sbjct: 280 SSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 182
Score = 105 bits (223), Expect = 3e-021
Identities = 51/90 (56%), Positives = 57/90 (63%)
Frame = +1 / +3
Query: 298 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 477
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 186 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 365
Query: 478 MAVVLLWYXXXXXXXXXXXXXGLKPISSCR 567
MA+VLLWY KPISS R
Sbjct: 366 MALVLLWYT*ESEWTSS*SSSAEKPISSYR 455
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,258,054,258
Number of Sequences: 1013581
Number of extensions: 32102616
Number of successful extensions: 164651
Number of sequences better than 1.0e-020: 74
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 73807058073
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)