TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.1
(867 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhea... 273 5e-072
ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G2... 273 5e-072
dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for put... 271 2e-071
gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO... 271 2e-071
gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1... 271 2e-071
emb|AX505699.1| Sequence 394 from Patent WO0216655 271 2e-071
emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGO... 271 2e-071
emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cD... 271 2e-071
ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT... 271 2e-071
ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G3... 220 1e-060
gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveg... 230 6e-059
gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveg... 229 1e-058
ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G2... 229 1e-058
gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P... 78 9e-055
gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 72 7e-049
gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis tha... 79 7e-049
gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11... 79 5e-048
gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveg... 178 2e-043
gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flower... 171 2e-041
ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G2... 142 1e-035
emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cD... 142 1e-035
gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14... 73 1e-032
gb|AV523023.1|AV523023 AV523023 Arabidopsis thaliana aboveg... 138 2e-031
gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Siliqu... 138 2e-031
ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 129 3e-031
ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 129 3e-031
gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein... 129 3e-031
ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G4381... 129 3e-031
emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwil... 129 3e-031
emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cD... 129 3e-031
gb|BT000941.1| Arabidopsis thaliana clone C105223 putative ... 129 3e-031
emb|AX505737.1| Sequence 432 from Patent WO0216655 129 3e-031
gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence 129 3e-031
gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana ... 129 3e-031
emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cD... 129 3e-031
gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS... 128 4e-031
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 132 7e-031
gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds 132 7e-031
ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1... 132 7e-031
gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green ... 132 8e-031
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 132 2e-029
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 132 2e-029
gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveg... 125 2e-029
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 116 7e-029
gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis tha... 116 8e-029
ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G3... 115 8e-029
gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-... 129 1e-028
gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots ... 129 1e-028
gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green ... 129 1e-028
emb|BX943872.1| Arabidopsis thaliana T-DNA flanking sequenc... 72 8e-027
gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complet... 116 7e-025
dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unk... 116 7e-025
ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2)... 116 7e-025
gb|BE528457.1|BE528457 M79F16STM Arabidopsis developing see... 111 3e-023
gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K... 51 5e-023
gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2... 51 5e-023
gb|CC794982.1|CC794982 SALK_060402.40.25.x Arabidopsis thal... 72 2e-022
gb|BU635669.1|BU635669 028G09 Infected Arabidopsis Leaf Ara... 107 4e-022
emb|BX943873.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 7e-022
gb|AV546094.1|AV546094 AV546094 Arabidopsis thaliana roots ... 106 7e-022
gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed... 96 3e-021
>dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhead-like protein, partial
cds, clone: RAFL22-12-J01
Length = 1966
Score = 273 bits (591), Expect = 5e-072
Identities = 104/154 (67%), Positives = 125/154 (81%)
Frame = +1 / +3
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
+PKFT+I+AQKNHHTKFF PDNVP GT++D+++CHPRNFDFY+C+HAGMIGTTRPTH
Sbjct: 1284 HPKFTVIVAQKNHHTKFFQSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTH 1463
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF DDLQELVHSLSYVYQRSTTAISVVAP+CYAHLAAAQ+G +K++E+
Sbjct: 1464 YHVLYDEIGFATDDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAAAQMGTVMKYEELSE 1643
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
VPV +P+LH V +SMFFC*
Sbjct: 1644 TSSSHGGMTTPGAVPVPPMPQLHNNVSTSMFFC* 1745
Score = 132 bits (282), Expect = 2e-029
Identities = 63/152 (41%), Positives = 93/152 (61%)
Frame = -1 / -3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 400
S EEHG + ++Q RD +R G MAR SLR L L+ +L C++ V N+
Sbjct: 1745 STEEHGG*NIIVQLRHRWHRDCSRCGHSSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 1566
Query: 399 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 220
* APLV + +R+H+ L+V+ + LV+Q++++ WP S NH+SM +EI+V W+TD
Sbjct: 1565 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 1386
Query: 219 VVNNSAGWNIIWLSRNEKFSVVILLGNDQCEL 124
VN+ + NII SR E+ VV+LLGN C+L
Sbjct: 1385 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKL 1290
Score = 91.3 bits (193), Expect(2) = 1e-036
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -2 / -1
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* GATT
Sbjct: 1744 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 1565
Query: 398 DMAVVLLW 375
++AVVLLW
Sbjct: 1564 EIAVVLLW 1541
Score = 84.9 bits (179), Expect(2) = 1e-036
Identities = 43/68 (63%), Positives = 44/68 (64%)
Frame = -2 / -1
Query: 323 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFW 144
PISS R * VGLVVPI+PA *KSK G*Q LS VP GTLSG KN VW FFW
Sbjct: 1489 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 1310
Query: 143 AMINVNLG 120
A I VN G
Sbjct: 1309 ATITVNFG 1286
>ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G21150 mRNA, complete cds
Length = 3018
Score = 273 bits (591), Expect = 5e-072
Identities = 104/154 (67%), Positives = 125/154 (81%)
Frame = +1 / +3
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
+PKFT+I+AQKNHHTKFF PDNVP GT++D+++CHPRNFDFY+C+HAGMIGTTRPTH
Sbjct: 2346 HPKFTVIVAQKNHHTKFFQSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTH 2525
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF DDLQELVHSLSYVYQRSTTAISVVAP+CYAHLAAAQ+G +K++E+
Sbjct: 2526 YHVLYDEIGFATDDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAAAQMGTVMKYEELSE 2705
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
VPV +P+LH V +SMFFC*
Sbjct: 2706 TSSSHGGITTPGAVPVPPMPQLHNNVSTSMFFC* 2807
Score = 131 bits (281), Expect = 3e-029
Identities = 63/152 (41%), Positives = 93/152 (61%)
Frame = -1 / -2
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 400
S EEHG + ++Q RD +R G MAR SLR L L+ +L C++ V N+
Sbjct: 2807 STEEHGG*NIIVQLRHRWHRDCSRCGDSSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 2628
Query: 399 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 220
* APLV + +R+H+ L+V+ + LV+Q++++ WP S NH+SM +EI+V W+TD
Sbjct: 2627 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2448
Query: 219 VVNNSAGWNIIWLSRNEKFSVVILLGNDQCEL 124
VN+ + NII SR E+ VV+LLGN C+L
Sbjct: 2447 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKL 2352
Score = 91.3 bits (193), Expect(2) = 1e-036
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -2 / -3
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* GATT
Sbjct: 2806 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 2627
Query: 398 DMAVVLLW 375
++AVVLLW
Sbjct: 2626 EIAVVLLW 2603
Score = 84.9 bits (179), Expect(2) = 1e-036
Identities = 43/68 (63%), Positives = 44/68 (64%)
Frame = -2 / -3
Query: 323 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFW 144
PISS R * VGLVVPI+PA *KSK G*Q LS VP GTLSG KN VW FFW
Sbjct: 2551 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2372
Query: 143 AMINVNLG 120
A I VN G
Sbjct: 2371 ATITVNFG 2348
>dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative zwille/pinhead,
complete cds, clone: RAFL19-56-B01
Length = 3090
Score = 271 bits (587), Expect = 2e-071
Identities = 103/154 (66%), Positives = 124/154 (80%)
Frame = +1 / +2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
+PKFT+I+AQKNHHTKFF PDNVP GT++D+++CHPRNFDFY+C+HAGMIGTTRPTH
Sbjct: 2411 HPKFTVIVAQKNHHTKFFQSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTH 2590
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF DDLQELVHSLSYVYQRSTTAISVV P+CYAHLAAAQ+G +K++E+
Sbjct: 2591 YHVLYDEIGFATDDLQELVHSLSYVYQRSTTAISVVVPVCYAHLAAAQMGTVMKYEELSE 2770
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
VPV +P+LH V +SMFFC*
Sbjct: 2771 TSSSHGGITTPGAVPVPPMPQLHNNVSTSMFFC* 2872
Score = 131 bits (280), Expect = 4e-029
Identities = 63/152 (41%), Positives = 93/152 (61%)
Frame = -1 / -3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 400
S EEHG + ++Q RD +R G MAR SLR L L+ +L C++ V N+
Sbjct: 2872 STEEHGG*NIIVQLRHRWHRDCSRCGDSSMARRSLRQLFILHHSSHLCSCQMSVTYRYND 2693
Query: 399 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 220
* APLV + +R+H+ L+V+ + LV+Q++++ WP S NH+SM +EI+V W+TD
Sbjct: 2692 *DRSGAPLVDIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2513
Query: 219 VVNNSAGWNIIWLSRNEKFSVVILLGNDQCEL 124
VN+ + NII SR E+ VV+LLGN C+L
Sbjct: 2512 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKL 2417
Score = 89.5 bits (189), Expect(2) = 4e-036
Identities = 40/68 (58%), Positives = 46/68 (67%)
Frame = -2 / -1
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* G TT
Sbjct: 2871 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGTTT 2692
Query: 398 DMAVVLLW 375
++AVVLLW
Sbjct: 2691 EIAVVLLW 2668
Score = 84.9 bits (179), Expect(2) = 4e-036
Identities = 43/68 (63%), Positives = 44/68 (64%)
Frame = -2 / -1
Query: 323 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFW 144
PISS R * VGLVVPI+PA *KSK G*Q LS VP GTLSG KN VW FFW
Sbjct: 2616 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2437
Query: 143 AMINVNLG 120
A I VN G
Sbjct: 2436 ATITVNFG 2413
>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
mRNA, complete cds
Length = 3171
Score = 271 bits (586), Expect = 2e-071
Identities = 103/154 (66%), Positives = 125/154 (81%)
Frame = +1 / +2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
NPKF L++AQKNHHTKFF P P+NVP GT++DNK+CHP+N DFY+C+HAGMIGTTRPTH
Sbjct: 2444 NPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTH 2623
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 2624 YHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSE 2803
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
+ V +LPRL + V +SMFFC*
Sbjct: 2804 TSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 2905
Score = 166 bits (357), Expect = 9e-040
Identities = 90/153 (58%), Positives = 96/153 (62%)
Frame = -2 / -1
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 2901 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2722
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 216
MA+VLLWY S KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 2721 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2542
Query: 215 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGF 117
S VP GT SG G KNLV *FF A N GF
Sbjct: 2541 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGF 2443
Score = 127 bits (272), Expect = 5e-028
Identities = 64/152 (42%), Positives = 91/152 (59%)
Frame = -1 / -3
Query: 573 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 394
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 2899 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 2720
Query: 393 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 214
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 2719 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 2540
Query: 213 NNSAGWNIIWLSRNEKFSVVILLGNDQCELGI 118
N+ NI E+ ++ILL + Q EL +
Sbjct: 2539 NDCPWRNIFRRRWLEELGMMILLSHQQKELWV 2444
>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
mRNA, complete cds
Length = 2806
Score = 271 bits (586), Expect = 2e-071
Identities = 103/154 (66%), Positives = 125/154 (81%)
Frame = +1 / +1
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
NPKF L++AQKNHHTKFF P P+NVP GT++DNK+CHP+N DFY+C+HAGMIGTTRPTH
Sbjct: 2314 NPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTH 2493
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 2494 YHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSE 2673
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
+ V +LPRL + V +SMFFC*
Sbjct: 2674 TSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 2775
Score = 166 bits (357), Expect = 9e-040
Identities = 90/153 (58%), Positives = 96/153 (62%)
Frame = -2 / -3
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 2771 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2592
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 216
MA+VLLWY S KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 2591 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2412
Query: 215 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGF 117
S VP GT SG G KNLV *FF A N GF
Sbjct: 2411 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGF 2313
Score = 127 bits (272), Expect = 5e-028
Identities = 64/152 (42%), Positives = 91/152 (59%)
Frame = -1 / -2
Query: 573 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 394
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 2769 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 2590
Query: 393 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 214
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 2589 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 2410
Query: 213 NNSAGWNIIWLSRNEKFSVVILLGNDQCELGI 118
N+ NI E+ ++ILL + Q EL +
Sbjct: 2409 NDCPWRNIFRRRWLEELGMMILLSHQQKELWV 2314
>emb|AX505699.1| Sequence 394 from Patent WO0216655
Length = 2793
Score = 271 bits (586), Expect = 2e-071
Identities = 103/154 (66%), Positives = 125/154 (81%)
Frame = +1 / +1
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
NPKF L++AQKNHHTKFF P P+NVP GT++DNK+CHP+N DFY+C+HAGMIGTTRPTH
Sbjct: 2332 NPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTH 2511
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 2512 YHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSE 2691
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
+ V +LPRL + V +SMFFC*
Sbjct: 2692 TSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 2793
Score = 166 bits (357), Expect = 9e-040
Identities = 90/153 (58%), Positives = 96/153 (62%)
Frame = -2 / -2
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 2789 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2610
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 216
MA+VLLWY S KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 2609 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2430
Query: 215 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGF 117
S VP GT SG G KNLV *FF A N GF
Sbjct: 2429 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGF 2331
Score = 127 bits (272), Expect = 5e-028
Identities = 64/152 (42%), Positives = 91/152 (59%)
Frame = -1 / -1
Query: 573 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 394
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 2787 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 2608
Query: 393 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 214
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 2607 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 2428
Query: 213 NNSAGWNIIWLSRNEKFSVVILLGNDQCELGI 118
N+ NI E+ ++ILL + Q EL +
Sbjct: 2427 NDCPWRNIFRRRWLEELGMMILLSHQQKELWV 2332
>emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE9 protein (At5g21150 gene)
Length = 2897
Score = 271 bits (586), Expect = 2e-071
Identities = 103/154 (66%), Positives = 125/154 (81%)
Frame = +1 / +1
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
+PKFT+I+AQKNHHTKFF PDNVP GT++D+++CHPRNFDFY+C+HAGMIGTTRPTH
Sbjct: 2230 HPKFTVIVAQKNHHTKFFQSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTH 2409
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF DDLQELVHSLS+VYQRSTTAISVVAP+CYAHLAAAQ+G +K++E+
Sbjct: 2410 YHVLYDEIGFATDDLQELVHSLSHVYQRSTTAISVVAPVCYAHLAAAQMGTVMKYEELSE 2589
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
VPV +P+LH V +SMFFC*
Sbjct: 2590 TSSSHGGITTPGTVPVPPMPQLHNNVSTSMFFC* 2691
Score = 134 bits (287), Expect = 4e-030
Identities = 64/152 (42%), Positives = 94/152 (61%)
Frame = -1 / -3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 400
S EEHG + ++Q RD +R G P MAR SLR L L+ +L C++ V N+
Sbjct: 2691 STEEHGG*NIIVQLRHRWHRDCSRCGDPSMARRSLRQLFILHHSSHLCSCQMSVTYRCND 2512
Query: 399 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 220
* APLV + +R+H+ L+V+ + LV+Q++++ WP S NH+SM +EI+V W+TD
Sbjct: 2511 *DRSGAPLVDMGQRMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDL 2332
Query: 219 VVNNSAGWNIIWLSRNEKFSVVILLGNDQCEL 124
VN+ + NII SR E+ VV+LLGN C+L
Sbjct: 2331 AVNDCSWRNIIRASRLEELCVVVLLGNYHCKL 2236
Score = 92.3 bits (195), Expect(2) = 5e-037
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = -2 / -1
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKNME+ T C G TGT+P V PPWL+EVSD SS F+ P AAA+ A* GATT
Sbjct: 2690 QQKNMEVETLLCSCGIGGTGTVPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATT 2511
Query: 398 DMAVVLLW 375
++AVVLLW
Sbjct: 2510 EIAVVLLW 2487
Score = 84.9 bits (179), Expect(2) = 5e-037
Identities = 43/68 (63%), Positives = 44/68 (64%)
Frame = -2 / -1
Query: 323 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFW 144
PISS R * VGLVVPI+PA *KSK G*Q LS VP GTLSG KN VW FFW
Sbjct: 2435 PISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGTLSGPRDWKNFVWWFFW 2256
Query: 143 AMINVNLG 120
A I VN G
Sbjct: 2255 ATITVNFG 2232
>emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS63ZA02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 838
Score = 271 bits (586), Expect = 2e-071
Identities = 103/154 (66%), Positives = 125/154 (81%)
Frame = +1 / +2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
NPKF L++AQKNHHTKFF P P+NVP GT++DNK+CHP+N DFY+C+HAGMIGTTRPTH
Sbjct: 158 NPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTH 337
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 338 YHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSE 517
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
+ V +LPRL + V +SMFFC*
Sbjct: 518 TSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 619
Score = 166 bits (357), Expect = 9e-040
Identities = 90/153 (58%), Positives = 96/153 (62%)
Frame = -2 / -2
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 615 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 436
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 216
MA+VLLWY S KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 435 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 256
Query: 215 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGF 117
S VP GT SG G KNLV *FF A N GF
Sbjct: 255 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGF 157
Score = 127 bits (272), Expect = 5e-028
Identities = 64/152 (42%), Positives = 91/152 (59%)
Frame = -1 / -1
Query: 573 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 394
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 613 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 434
Query: 393 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 214
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 433 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 254
Query: 213 NNSAGWNIIWLSRNEKFSVVILLGNDQCELGI 118
N+ NI E+ ++ILL + Q EL +
Sbjct: 253 NDCPWRNIFRRRWLEELGMMILLSHQQKELWV 158
>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA,
complete cds
Length = 3166
Score = 271 bits (586), Expect = 2e-071
Identities = 103/154 (66%), Positives = 125/154 (81%)
Frame = +1 / +2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
NPKF L++AQKNHHTKFF P P+NVP GT++DNK+CHP+N DFY+C+HAGMIGTTRPTH
Sbjct: 2444 NPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTH 2623
Query: 298 YHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXX 477
YH+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 2624 YHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSE 2803
Query: 478 XXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
+ V +LPRL + V +SMFFC*
Sbjct: 2804 TSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 2905
Score = 166 bits (357), Expect = 9e-040
Identities = 90/153 (58%), Positives = 96/153 (62%)
Frame = -2 / -2
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 2901 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 2722
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 216
MA+VLLWY S KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 2721 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 2542
Query: 215 STTVPAGTLSGFPGMKNLVW*FFWAMINVNLGF 117
S VP GT SG G KNLV *FF A N GF
Sbjct: 2541 SMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGF 2443
Score = 127 bits (272), Expect = 5e-028
Identities = 64/152 (42%), Positives = 91/152 (59%)
Frame = -1 / -1
Query: 573 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 394
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 2899 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 2720
Query: 393 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 214
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 2719 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 2540
Query: 213 NNSAGWNIIWLSRNEKFSVVILLGNDQCELGI 118
N+ NI E+ ++ILL + Q EL +
Sbjct: 2539 NDCPWRNIFRRRWLEELGMMILLSHQQKELWV 2444
>ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 mRNA, complete cds
Length = 2637
Score = 220 bits (474), Expect(2) = 1e-060
Identities = 85/115 (73%), Positives = 98/115 (85%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHY 300
PKFT+I+AQKNHHTK F P+NVPAGTVVD K+ HP N+DFYMC+HAG IGT+RP HY
Sbjct: 2215 PKFTVIVAQKNHHTKLFQAKGPENVPAGTVVDTKIVHPTNYDFYMCAHAGKIGTSRPAHY 2394
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 465
H+L DEIGF+PDDLQ L+HSLSYV QRSTTA S+VAP+ YAHLAAAQV QF KF+
Sbjct: 2395 HVLLDEIGFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQVAQFTKFE 2559
Score = 81.3 bits (171), Expect(3) = 6e-028
Identities = 43/71 (60%), Positives = 46/71 (64%)
Frame = -2 / -2
Query: 332 GLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW* 153
G KPISS ** GL VPI PA HM*KS F+G L+STTVPAGT SG NLVW
Sbjct: 2426 GEKPISSSNTW**AGLEVPIFPA*AHM*KS*FVGCTILVSTTVPAGTFSGPLA*NNLVWW 2247
Query: 152 FFWAMINVNLG 120
FF A + VN G
Sbjct: 2246 FF*ATMTVNFG 2214
Score = 48.7 bits (100), Expect(3) = 6e-028
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -2 / -2
Query: 476 SDISSNFMNCPTWAAARWA*QMGATTDMAVVLLW 375
SDI SNF+NC T AAAR A + GAT ++AVVL W
Sbjct: 2570 SDIPSNFVNCAT*AAAR*AYRTGATIEVAVVLRW 2469
Score = 36.3 bits (73), Expect(2) = 1e-060
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 523 VQELPRLHEKVRSSMFFC* 579
V ELPRLHE V +MFFC*
Sbjct: 2581 VPELPRLHENVEGNMFFC* 2637
Score = 34.5 bits (69), Expect(3) = 6e-028
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 578 QQKNMELLTFSCRRGSSWT 522
QQKNM TFSCRRGSS T
Sbjct: 2636 QQKNMLPSTFSCRRGSSGT 2580
>gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL49a09F 3', mRNA
sequence
Length = 611
Score = 230 bits (496), Expect = 6e-059
Identities = 88/137 (64%), Positives = 108/137 (78%)
Frame = +1 / -2
Query: 169 FIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQE 348
F P P+NVP GT++DNK+CHP+ DFY+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQE
Sbjct: 610 FQPTSPENVPPGTIIDNKICHPKTNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQE 431
Query: 349 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQ 528
LVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++ + V
Sbjct: 430 LVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVA 251
Query: 529 ELPRLHEKVRSSMFFC* 579
+LPRL + V +SMFFC*
Sbjct: 250 QLPRLKDNVANSMFFC* 200
Score = 147 bits (316), Expect = 4e-034
Identities = 79/136 (58%), Positives = 85/136 (62%)
Frame = -2 / +3
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 204 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 383
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 216
MA+VLLWY S KPISS R **VG VVPIIPA *KS G* LL
Sbjct: 384 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLVFG*HILL 563
Query: 215 STTVPAGTLSGFPGMK 168
S VP GT SG G K
Sbjct: 564 SMIVPGGTFSGDVGWK 611
Score = 114 bits (244), Expect = 3e-024
Identities = 56/128 (43%), Positives = 78/128 (60%)
Frame = -1 / +2
Query: 573 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 394
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 206 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 385
Query: 393 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 214
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI W+T FVV
Sbjct: 386 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIGLWVTYFVV 565
Query: 213 NNSAGWNI 190
N+ NI
Sbjct: 566 NDCPWRNI 589
>gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL27f05F 3', mRNA
sequence
Length = 544
Score = 229 bits (494), Expect = 1e-058
Identities = 87/132 (65%), Positives = 107/132 (81%)
Frame = +1 / -3
Query: 184 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 363
P+NVP GT++DNK+CHP+N DFY+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQELVHSL
Sbjct: 542 PENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSL 363
Query: 364 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRL 543
SYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++ + V +LPRL
Sbjct: 362 SYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRL 183
Query: 544 HEKVRSSMFFC* 579
+ V +SMFFC*
Sbjct: 182 KDNVANSMFFC* 147
Score = 148 bits (318), Expect = 2e-034
Identities = 78/131 (59%), Positives = 84/131 (64%)
Frame = -2 / +1
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 151 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 330
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLL 216
MA+VLLWY S KPISS R **VG VVPIIPA *KS F G* LL
Sbjct: 331 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILL 510
Query: 215 STTVPAGTLSG 183
S VP GT SG
Sbjct: 511 SMIVPGGTFSG 543
Score = 117 bits (251), Expect = 4e-025
Identities = 57/128 (44%), Positives = 79/128 (61%)
Frame = -1 / +3
Query: 573 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 394
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 153 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 332
Query: 393 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVV 214
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+ T VEI V W+T FVV
Sbjct: 333 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVV 512
Query: 213 NNSAGWNI 190
N+ NI
Sbjct: 513 NDCPWRNI 536
>ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 mRNA, complete cds
Length = 2553
Score = 229 bits (494), Expect = 1e-058
Identities = 90/145 (62%), Positives = 108/145 (74%)
Frame = +1 / +1
Query: 145 QKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIG 324
Q NHHTKFF P+NV GT++D+ +CH N DFY+C+HAG IGTTRPTHYH+L+DEIG
Sbjct: 2119 QINHHTKFFQTESPNNVLPGTIIDSNICHQHNNDFYLCAHAGKIGTTRPTHYHVLYDEIG 2298
Query: 325 FNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXX 504
F+ D LQELVHSLSYVYQRSTTAIS+VAPICYAHLAAAQ+ +KF++M
Sbjct: 2299 FDTDQLQELVHSLSYVYQRSTTAISLVAPICYAHLAAAQMATAMKFEDMSETSSSHGGIT 2478
Query: 505 XXXXVPVQELPRLHEKVRSSMFFC* 579
VPV +P+L+ V SSMFFC*
Sbjct: 2479 TAGAVPVPPMPKLNTNVASSMFFC* 2553
Score = 89.0 bits (188), Expect(2) = 2e-026
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -2 / -2
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKN+EL T G TGT PA V PPWLDEVSD+SSNF+ AAA+ A* +GAT
Sbjct: 2552 QQKNIELATLVFSFGMGGTGTAPAVVIPPWLDEVSDMSSNFIAVAICAAAK*A*HIGATR 2373
Query: 398 DMAVVLLW 375
+MAVVL W
Sbjct: 2372 EMAVVLRW 2349
Score = 52.8 bits (109), Expect(2) = 2e-026
Identities = 32/58 (55%), Positives = 32/58 (55%)
Frame = -2 / -2
Query: 323 PISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*F 150
PISS * VGLVVPI PA *KS *Q LLS VP TL G KN VW F
Sbjct: 2297 PISS*STW*CVGLVVPIFPA*AQR*KSLLCW*QMLLSIIVPGRTLLGLSVWKNFVWWF 2124
>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
sequence
Length = 99345
Score = 78.0 bits (164), Expect(5) = 1e-031
Identities = 37/58 (63%), Positives = 41/58 (70%)
Frame = -2 / +1
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 402
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GAT
Sbjct: 36274 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGAT 36447
Score = 76.2 bits (160), Expect(5) = 9e-055
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +1 / -1
Query: 277 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 375
GTTRPTHYH+L+DEIGF+ D+LQELVHSLSYVY
Sbjct: 36762 GTTRPTHYHVLYDEIGFSADELQELVHSLSYVY 36664
Score = 71.2 bits (149), Expect(5) = 9e-055
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +1 / -2
Query: 403 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
VAPICYAHLAAAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 36446 VAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 36270
Score = 61.6 bits (128), Expect(5) = 9e-055
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = +1 / -3
Query: 199 AGTVVDNKVCHPRNFDFYMCSHAGMI 276
AGT++DNK+CHP+N DFY+C+HAGMI
Sbjct: 36925 AGTIIDNKICHPKNNDFYLCAHAGMI 36848
Score = 59.3 bits (123), Expect(5) = 9e-055
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1 / -2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAG 204
NPKF L++AQKNHHTKFF P P+NVP G
Sbjct: 37085 NPKFLLLVAQKNHHTKFFQPTSPENVPPG 36999
Score = 40.0 bits (81), Expect(5) = 1e-031
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 375 VHVRERVHQLLQVIRIEAYLVMQDVIVSWPGS 280
+H+ ERV + L+ + + L++QDV+VSW GS
Sbjct: 36664 IHIGERVDKFLKFVS*KTNLIIQDVVVSWAGS 36759
Score = 35.0 bits (70), Expect(5) = 1e-031
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 276 NHSSM*THVEIEVPWMTDFVVNN 208
NHSS+ T VEI V W+T FVVN+
Sbjct: 36848 NHSSVSTEVEIIVLWVTYFVVND 36916
Score = 33.6 bits (67), Expect(5) = 1e-031
Identities = 17/29 (58%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 203 PAGTLSGFPGMKNLVW*FFWAMINVNLGF 117
P GT SG G KNLV *FF A N GF
Sbjct: 37000 PGGTFSGDVGWKNLV**FF*ATNKRNFGF 37086
Score = 24.4 bits (47), Expect(5) = 1e-031
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 401 TDMAVVLLWY 372
T+MA+VLLWY
Sbjct: 36538 TEMALVLLWY 36567
Score = 22.6 bits (43), Expect(5) = 9e-055
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 373 YQRSTTAISV 402
YQRST+AISV
Sbjct: 36566 YQRSTSAISV 36537
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
Length = 96102
Score = 72.1 bits (151), Expect(5) = 7e-049
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1 / -1
Query: 277 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 372
GTTRPTHYH+L+DEIGF+ D LQELVHSLSYV
Sbjct: 84063 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 83968
Score = 70.7 bits (148), Expect(5) = 7e-049
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +1 / -1
Query: 403 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC*A 582
VAPICYAHLAAAQ+ +KF++M VPV +P+L+ V SSMFFC*
Sbjct: 83760 VAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVPPMPKLNTNVASSMFFC*K 83581
Query: 583 AGN 591
N
Sbjct: 83580 NKN 83572
Score = 56.1 bits (116), Expect(5) = 7e-049
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 193 VPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYH 303
+PAGT++D+ +CH N DFY+C+HAG I + + +Y+
Sbjct: 84229 LPAGTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 84119
Score = 48.7 bits (100), Expect(5) = 7e-049
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1 / -3
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAG 204
+PKFTLIIAQ NHHTKFF P+NV G
Sbjct: 84391 DPKFTLIIAQINHHTKFFQTESPNNVLPG 84305
Score = 23.1 bits (44), Expect(5) = 7e-049
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -3
Query: 373 YQRSTTAISV 402
YQRSTTAIS+
Sbjct: 83866 YQRSTTAISL 83837
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
V, complete sequence
Length = 84413
Score = 79.0 bits (166), Expect(4) = 2e-048
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1 / -3
Query: 349 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQ 528
L H + Y+ + + + VAP+CYAHLAAAQ+G +K++E+ VPV
Sbjct: 12138 LQHYVQYLNSQVSLCLFAVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVP 11959
Query: 529 ELPRLHEKVRSSMFFC* 579
+P+LH V +SMFFC*
Sbjct: 11958 PMPQLHNNVSTSMFFC* 11908
Score = 73.9 bits (155), Expect(4) = 7e-023
Identities = 34/61 (55%), Positives = 39/61 (63%)
Frame = -2 / +2
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* GAT
Sbjct: 11909 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATA 12088
Query: 398 D 396
+
Sbjct: 12089 N 12091
Score = 73.5 bits (154), Expect(4) = 2e-048
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1 / -2
Query: 277 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 372
GTTRPTHYH+L+DEIGF DDLQELVHSLSYV
Sbjct: 12403 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 12308
Score = 72.1 bits (151), Expect(5) = 7e-049
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1 / +3
Query: 277 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 372
GTTRPTHYH+L+DEIGF+ D LQELVHSLSYV
Sbjct: 69651 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 69746
Score = 70.7 bits (148), Expect(5) = 7e-049
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +1 / +3
Query: 403 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC*A 582
VAPICYAHLAAAQ+ +KF++M VPV +P+L+ V SSMFFC*
Sbjct: 69954 VAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVPPMPKLNTNVASSMFFC*K 70133
Query: 583 AGN 591
N
Sbjct: 70134 NKN 70142
Score = 66.6 bits (139), Expect(4) = 2e-048
Identities = 20/28 (71%), Positives = 28/28 (100%)
Frame = +1 / -3
Query: 193 VPAGTVVDNKVCHPRNFDFYMCSHAGMI 276
+PAGT++D+++CHPRNFDFY+C+HAGMI
Sbjct: 12579 LPAGTIIDSQICHPRNFDFYLCAHAGMI 12496
Score = 57.4 bits (119), Expect(4) = 2e-048
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1 / -2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTV 210
+PKFT+I+AQKNHHTKFF PDNVP G +
Sbjct: 12739 HPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 12647
Score = 56.1 bits (116), Expect(5) = 7e-049
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +1 / +2
Query: 193 VPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYH 303
+PAGT++D+ +CH N DFY+C+HAG I + + +Y+
Sbjct: 69485 LPAGTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 69595
Score = 48.7 bits (100), Expect(5) = 7e-049
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1 / +2
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAG 204
+PKFTLIIAQ NHHTKFF P+NV G
Sbjct: 69323 DPKFTLIIAQINHHTKFFQTESPNNVLPG 69409
Score = 45.5 bits (93), Expect(4) = 7e-023
Identities = 18/29 (62%), Positives = 19/29 (65%)
Frame = -2 / +3
Query: 206 VPAGTLSGFPGMKNLVW*FFWAMINVNLG 120
+P GTLSG KN VW FFWA I VN G
Sbjct: 12651 LPGGTLSGPRDWKNFVWWFFWATITVNFG 12737
Score = 35.0 bits (70), Expect(4) = 7e-023
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1 / +1
Query: 276 NHSSM*THVEIEVPWMTDFVVNN 208
NH+SM +EI+V W+TD VN+
Sbjct: 12496 NHASMGAEIEIKVAWVTDLAVND 12564
Score = 34.5 bits (69), Expect(4) = 7e-023
Identities = 11/32 (34%), Positives = 24/32 (75%)
Frame = -1 / +2
Query: 375 VHVRERVHQLLQVIRIEAYLVMQDVIVSWPGS 280
+H+ +R+H+ L+V+ + LV+Q++++ WP S
Sbjct: 12305 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCS 12400
Score = 23.1 bits (44), Expect(5) = 7e-049
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 373 YQRSTTAISV 402
YQRSTTAIS+
Sbjct: 69848 YQRSTTAISL 69877
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete
sequence
Length = 112600
Score = 79.0 bits (166), Expect(4) = 5e-048
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1 / -1
Query: 349 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQ 528
L H + Y+ + + + VAP+CYAHLAAAQ+G +K++E+ VPV
Sbjct: 77053 LQHYVQYLNSQVSLCLFAVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVP 76874
Query: 529 ELPRLHEKVRSSMFFC* 579
+P+LH V +SMFFC*
Sbjct: 76873 PMPQLHNNVSTSMFFC* 76823
Score = 73.9 bits (155), Expect(4) = 2e-022
Identities = 34/61 (55%), Positives = 39/61 (63%)
Frame = -2 / +3
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKNME+ T C G TGT P V PPWL+EVSD SS F+ P AAA+ A* GAT
Sbjct: 76824 QQKNMEVETLLCSCGIGGTGTAPGVVIPPWLEEVSDNSSYFITVPICAAAK*A*HTGATA 77003
Query: 398 D 396
+
Sbjct: 77004 N 77006
Score = 73.5 bits (154), Expect(4) = 5e-048
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1 / -3
Query: 277 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 372
GTTRPTHYH+L+DEIGF DDLQELVHSLSYV
Sbjct: 77318 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 77223
Score = 66.6 bits (139), Expect(4) = 5e-048
Identities = 20/28 (71%), Positives = 28/28 (100%)
Frame = +1 / -1
Query: 193 VPAGTVVDNKVCHPRNFDFYMCSHAGMI 276
+PAGT++D+++CHPRNFDFY+C+HAGMI
Sbjct: 77494 LPAGTIIDSQICHPRNFDFYLCAHAGMI 77411
Score = 57.4 bits (119), Expect(4) = 5e-048
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1 / -3
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTV 210
+PKFT+I+AQKNHHTKFF PDNVP G +
Sbjct: 77654 HPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 77562
Score = 45.5 bits (93), Expect(4) = 2e-022
Identities = 18/29 (62%), Positives = 19/29 (65%)
Frame = -2 / +1
Query: 206 VPAGTLSGFPGMKNLVW*FFWAMINVNLG 120
+P GTLSG KN VW FFWA I VN G
Sbjct: 77566 LPGGTLSGPRDWKNFVWWFFWATITVNFG 77652
Score = 35.0 bits (70), Expect(4) = 2e-022
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1 / +2
Query: 276 NHSSM*THVEIEVPWMTDFVVNN 208
NH+SM +EI+V W+TD VN+
Sbjct: 77411 NHASMGAEIEIKVAWVTDLAVND 77479
Score = 34.5 bits (69), Expect(4) = 2e-022
Identities = 11/32 (34%), Positives = 24/32 (75%)
Frame = -1 / +3
Query: 375 VHVRERVHQLLQVIRIEAYLVMQDVIVSWPGS 280
+H+ +R+H+ L+V+ + LV+Q++++ WP S
Sbjct: 77220 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCS 77315
>gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL43g03F 3', mRNA
sequence
Length = 484
Score = 178 bits (384), Expect = 2e-043
Identities = 71/109 (65%), Positives = 86/109 (78%)
Frame = +1 / -1
Query: 253 MCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLA 432
+C+HAGMIGTTRPTHYH+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLA
Sbjct: 484 LCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLA 305
Query: 433 AAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
AAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 304 AAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 158
Score = 122 bits (262), Expect = 1e-026
Identities = 63/104 (60%), Positives = 69/104 (66%)
Frame = -2 / +3
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 162 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 341
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPA 264
MA+VLLWY S KPISS R **VG VVPIIPA
Sbjct: 342 MALVLLWYT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA 473
>gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB75ZH02 3PRIM, mRNA sequence
Length = 922
Score = 171 bits (369), Expect = 2e-041
Identities = 71/116 (61%), Positives = 85/116 (73%)
Frame = +1 / -3
Query: 232 PRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAP 411
P+ F HAGMIGTTRPTHYH+L+DEIG + D+LQELVHSLSYVYQRST+AISVVAP
Sbjct: 557 PKEQ*FLPLCHAGMIGTTRPTHYHVLYDEIGLSADELQELVHSLSYVYQRSTSAISVVAP 378
Query: 412 ICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
ICYAHLAAAQ+G F+KF++ + V +LPRL + V +SMFFC*
Sbjct: 377 ICYAHLAAAQLGTFMKFEDQSETSSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 210
Score = 121 bits (259), Expect(2) = 4e-035
Identities = 62/104 (59%), Positives = 69/104 (66%)
Frame = -2 / +1
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 214 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 393
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPA 264
MA+VLLWY S +PISS R **VG VVPIIPA
Sbjct: 394 MALVLLWYT*ESEWTSS*SSSAERPISSYRTW**VGRVVPIIPA 525
Score = 95.5 bits (202), Expect(2) = 4e-031
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = +1 / -1
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMC 258
NPKF L++AQKNHHTKFF P P+NVP GT++DNK+ HP+N DFY+C
Sbjct: 670 NPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKIFHPKNNDFYLC 530
Score = 95.0 bits (201), Expect(2) = 8e-023
Identities = 44/104 (42%), Positives = 64/104 (61%)
Frame = -1 / +3
Query: 573 EEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*Y 394
EEHG + ++ +L +RD + MA * LR + +L+E P L C+V +AD NN
Sbjct: 216 EEHGVGDVVFESWELCNRDWSWSCDTTMA**CLRLIFKLHERPKLSSCQVSIADRRNNRN 395
Query: 393 GCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM 262
G A LVH+ ERV + L+ + + L++QDV+VSW GS NHSS+
Sbjct: 396 GTGASLVHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSV 527
Score = 62.0 bits (129), Expect(2) = 4e-031
Identities = 39/76 (51%), Positives = 41/76 (53%)
Frame = +2 / -1
Query: 266 LE*LGLPGQLTITSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRL 445
LE*L LP QLT TSCM R L R+ TRS CTK A P+ LL SA T Q L
Sbjct: 523 LE*LELPAQLTTTSCMMRLVFQLTNFRNLSTRSPMCTKEAPVPFLLLRRSAMLTWQLLSL 344
Query: 446 GSS*SSTRCRRLHLAM 493
G S*S R H AM
Sbjct: 343 GRS*SLKISLRHHQAM 296
Score = 49.2 bits (101), Expect(2) = 4e-035
Identities = 27/45 (60%), Positives = 27/45 (60%)
Frame = -2 / +3
Query: 251 *KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAMINVNLGF 117
*KS F G* LLS VP GT SG G KNLV *FF A N GF
Sbjct: 537 *KSLFFG*NILLSMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGF 671
Score = 34.5 bits (69), Expect(2) = 8e-023
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1 / +2
Query: 258 THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSVVILLGNDQCELGI 118
T VEI V W+ FVVN+ NI E+ ++ILL + Q EL +
Sbjct: 530 TEVEIIVLWVKYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWV 670
>ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G27880 mRNA, complete cds
Length = 2994
Score = 142 bits (305), Expect(2) = 1e-035
Identities = 56/133 (42%), Positives = 78/133 (58%)
Frame = +1 / +1
Query: 181 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 360
K N+ GTVVD K+CHP FDFY+ SHAG+ GT+RP HYH+L DE GF D LQ L ++
Sbjct: 2596 KSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNN 2775
Query: 361 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPR 540
L Y Y R T ++S+V P YAHLAA + +++ + + +LP
Sbjct: 2776 LCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPA 2955
Query: 541 LHEKVRSSMFFC* 579
+ + V+ MF+C*
Sbjct: 2956 IKDNVKEVMFYC* 2994
Score = 29.9 bits (59), Expect(2) = 1e-035
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFF 171
P+ T +I QK HHT+ F
Sbjct: 2512 PRVTFVIVQKRHHTRLF 2562
>emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL43ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1092
Score = 142 bits (305), Expect(2) = 1e-035
Identities = 56/133 (42%), Positives = 78/133 (58%)
Frame = +1 / +2
Query: 181 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 360
K N+ GTVVD K+CHP FDFY+ SHAG+ GT+RP HYH+L DE GF D LQ L ++
Sbjct: 512 KSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNN 691
Query: 361 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPR 540
L Y Y R T ++S+V P YAHLAA + +++ + + +LP
Sbjct: 692 LCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPA 871
Query: 541 LHEKVRSSMFFC* 579
+ + V+ MF+C*
Sbjct: 872 IKDNVKEVMFYC* 910
Score = 29.9 bits (59), Expect(2) = 1e-035
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFF 171
P+ T +I QK HHT+ F
Sbjct: 428 PRVTFVIVQKRHHTRLF 478
>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete
sequence
Length = 96801
Score = 73.0 bits (153), Expect(3) = 1e-032
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +2
Query: 277 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAIS 399
GT+RP HYH+L DEIGF+PDDLQ L+HSLSYV S T+I+
Sbjct: 50789 GTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYV*VHSLTSIT 50911
Score = 53.8 bits (111), Expect(3) = 1e-032
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1 / +1
Query: 199 AGTVVDNKVCHPRNFDFYMCSHAGMI 276
+GTVVD K+ HP N+DFYMC+HAG I
Sbjct: 50626 SGTVVDTKIVHPTNYDFYMCAHAGKI 50703
Score = 53.8 bits (111), Expect(3) = 1e-032
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAG 204
PKFT+I+AQKNHHTK F P+NVPAG
Sbjct: 50457 PKFTVIVAQKNHHTKLFQAKGPENVPAG 50540
>gb|AV523023.1|AV523023 AV523023 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL13c04F 3', mRNA
sequence
Length = 462
Score = 138 bits (297), Expect = 2e-031
Identities = 57/93 (61%), Positives = 70/93 (75%)
Frame = +1 / -3
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXX 480
H+L+DEIGF+ D+LQELVHSLSYVYQRST+AISVVAPICYAHLAAAQ+G F+KF++
Sbjct: 460 HVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSET 281
Query: 481 XXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
+ V +LPRL + V +SMFFC*
Sbjct: 280 SSSHGGITAPGPISVAQLPRLKDNVANSMFFC* 182
Score = 105 bits (223), Expect = 3e-021
Identities = 52/90 (57%), Positives = 58/90 (64%)
Frame = -2 / +3
Query: 575 QKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATTD 396
QKNMEL T S GS T P V PPWLD+VSD SSNFMN P+ AAA+ A*Q+GATT+
Sbjct: 186 QKNMELATLSLSLGSCATEIGPGAVIPPWLDDVSD*SSNFMNVPS*AAAK*A*QIGATTE 365
Query: 395 MAVVLLWYXXXXXXXXXXXXSGLKPISSCR 306
MA+VLLWY S KPISS R
Sbjct: 366 MALVLLWYT*ESEWTSS*SSSAEKPISSYR 455
>gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Silique Col-0 Arabidopsis thaliana
cDNA clone GSLTSIL68ZF03 5PRIM, mRNA sequence
Length = 616
Score = 138 bits (296), Expect = 2e-031
Identities = 54/127 (42%), Positives = 76/127 (59%)
Frame = +1 / +1
Query: 199 AGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQ 378
+GTVVD K+CHP FDFY+ SHAG+ GT+RP HYH+L DE GF D LQ L ++L Y Y
Sbjct: 19 SGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYA 198
Query: 379 RSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVR 558
R T ++S+V P YAHLAA + +++ + + +LP + + V+
Sbjct: 199 RCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPAIKDNVK 378
Query: 559 SSMFFC* 579
MF+C*
Sbjct: 379 EVMFYC* 399
>ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.2 mRNA, complete cds
Length = 3489
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2877 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3056
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 3057 TYARCTRSVSIVPPAYYAHLAA 3122
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFFIPGKPD 189
P T ++ QK HHT+ F D
Sbjct: 2784 PPVTFVVVQKRHHTRLFAQNHND 2852
>ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.1 mRNA, complete cds
Length = 3483
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2871 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3050
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 3051 TYARCTRSVSIVPPAYYAHLAA 3116
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFFIPGKPD 189
P T ++ QK HHT+ F D
Sbjct: 2778 PPVTFVVVQKRHHTRLFAQNHND 2846
>gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein (AGO1) mRNA, complete cds
Length = 3473
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2848 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3027
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 3028 TYARCTRSVSIVPPAYYAHLAA 3093
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPD 189
P T ++ QK HHT+ F D
Sbjct: 2755 PPVTFVVVQKRHHTRLFAQNHND 2823
>ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G43810 (ZLL) mRNA, complete cds
Length = 3330
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = +1 / +3
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 2658 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2837
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2838 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2942
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFF 171
P T I+ QK HHT+ F
Sbjct: 2604 PPVTFIVVQKRHHTRLF 2654
>emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwille protein
Length = 3323
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = +1 / +3
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 2658 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2837
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2838 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2942
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFF 171
P T I+ QK HHT+ F
Sbjct: 2604 PPVTFIVVQKRHHTRLF 2654
>emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS34ZG07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3188
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2598 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2777
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 2778 TYARCTRSVSIVPPAYYAHLAA 2843
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPD 189
P T ++ QK HHT+ F D
Sbjct: 2503 PPVTFVVVQKRHHTRLFAQNHND 2571
>gb|BT000941.1| Arabidopsis thaliana clone C105223 putative leaf development protein
Argonaute (At1g48410) mRNA, complete cds
Length = 3177
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2722 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2901
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 2902 TYARCTRSVSIVPPAYYAHLAA 2967
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPD 189
P T ++ QK HHT+ F D
Sbjct: 2629 PPVTFVVVQKRHHTRLFAQNHND 2697
>emb|AX505737.1| Sequence 432 from Patent WO0216655
Length = 2967
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = +1 / +1
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 2530 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2709
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 2710 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 2814
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFF 171
P T I+ QK HHT+ F
Sbjct: 2476 PPVTFIVVQKRHHTRLF 2526
>gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence
Length = 2764
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +2
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 2120 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2299
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 2300 TYARCTRSVSIVPPAYYAHLAA 2365
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFFIPGKPD 189
P T ++ QK HHT+ F D
Sbjct: 2027 PPVTFVVVQKRHHTRLFAQNHND 2095
>gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P13212
5-PRIME, mRNA sequence
Length = 775
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 204 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 383
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 384 TYARCTRSVSIVPPAYYAHLAA 449
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFFIPGKPD 189
P T ++ QK HHT+ F D
Sbjct: 111 PPVTFVVVQKRHHTRLFAQNHND 179
>emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL91ZD02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 728
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / +1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 127 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 306
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 307 TYARCTRSVSIVPPAYYAHLAA 372
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFFIPGKPD 189
P T ++ QK HHT+ F D
Sbjct: 33 PPVTFVVVQKRHHTRLFAQNHND 101
>gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769F213Q 5-PRIME, mRNA sequence
Length = 532
Score = 128 bits (275), Expect(2) = 4e-031
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = +1 / +3
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N+H + N+ GTVVD K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 144 NNHRDKNSTHRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 323
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
D +Q L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 324 ADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 428
Score = 28.6 bits (56), Expect(2) = 4e-031
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFF 171
P T I+ QK HHT+ F
Sbjct: 90 PPVTFIVVQKRHHTRLF 140
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 132 bits (282), Expect(2) = 7e-031
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +1 / -2
Query: 136 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 315
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 45332 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 45153
Query: 316 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 45152 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 45033
Score = 24.4 bits (47), Expect(2) = 7e-031
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 532 LPRLHEKVRSSMFFC* 579
LP+L + V++ MF+C*
Sbjct: 44933 LPKLSDNVKNLMFYC* 44886
>gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds
Length = 3161
Score = 132 bits (282), Expect(2) = 7e-031
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +1 / +1
Query: 136 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 315
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 2677 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 2856
Query: 316 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 2857 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 2976
Score = 24.4 bits (47), Expect(2) = 7e-031
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 532 LPRLHEKVRSSMFFC* 579
LP+L + V++ MF+C*
Sbjct: 3076 LPKLSDNVKNLMFYC* 3123
>ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1G69440 (AGO7) mRNA,
complete cds
Length = 3163
Score = 132 bits (282), Expect(2) = 7e-031
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +1 / +1
Query: 136 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 315
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 2677 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 2856
Query: 316 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 2857 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 2976
Score = 24.4 bits (47), Expect(2) = 7e-031
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 532 LPRLHEKVRSSMFFC* 579
LP+L + V++ MF+C*
Sbjct: 3076 LPKLSDNVKNLMFYC* 3123
>gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ053e11F 3', mRNA sequence
Length = 551
Score = 132 bits (282), Expect(2) = 8e-031
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +1 / -2
Query: 136 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 315
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 484 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 305
Query: 316 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 304 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 185
Score = 24.4 bits (47), Expect(2) = 8e-031
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 532 LPRLHEKVRSSMFFC* 579
LP+L + V++ MF+C*
Sbjct: 85 LPKLSDNVKNLMFYC* 38
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 132 bits (282), Expect = 2e-029
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +1 / -3
Query: 136 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 315
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 10344207 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 10344028
Query: 316 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 10344027 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 10343908
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 132 bits (282), Expect = 2e-029
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +1 / -2
Query: 136 IIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHD 315
++ +++H F +N+P GTVVD + HP+ FDFY+CSH G+ GT+RPTHYHIL D
Sbjct: 26105674 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 26105495
Query: 316 EIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
E F D+LQ LV++L Y + R T IS+V P YAHLAA
Sbjct: 26105494 ENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAA 26105375
Score = 116 bits (249), Expect = 7e-025
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +1 / +2
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
NVP+GTVVD KV HP +DFY+CSH G IGT++PTHY+ L DE+GF D +Q+L+ + +
Sbjct: 11184674 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 11184853
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
+ R T +S+V P+ YA + A
Sbjct: 11184854 TFTRCTKPVSLVPPVYYADMVA 11184919
Score = 115 bits (246), Expect = 2e-024
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = +1 / +1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
NVP+GTVVD + HP +DFY+CS G IGT++PTHY++L DEIGFN + +Q+L+ L +
Sbjct: 11191879 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 11192058
Query: 370 VYQRSTTAISVVAPICYAHLAAAQ 441
+ R T +++V P+ YA AA++
Sbjct: 11192059 TFTRCTKPVALVPPVSYADKAASR 11192130
>gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL40f03F 3', mRNA
sequence
Length = 447
Score = 125 bits (267), Expect(2) = 2e-029
Identities = 47/82 (57%), Positives = 59/82 (71%)
Frame = +1 / -1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CH FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 360 NILPGTVVDSKICHRTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 181
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 180 TYARCTRSVSIVPPAYYAHLAA 115
Score = 26.3 bits (51), Expect(2) = 2e-029
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1 / -1
Query: 130 TLIIAQKNHHTKFFIPGKPD 189
T ++ QK HHT+ F D
Sbjct: 444 TFVVVQKRHHTRLFAQNHND 385
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 116 bits (249), Expect = 7e-025
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +1 / +3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
NVP+GTVVD KV HP +DFY+CSH G IGT++PTHY+ L DE+GF D +Q+L+ + +
Sbjct: 11193474 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 11193653
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
+ R T +S+V P+ YA + A
Sbjct: 11193654 TFTRCTKPVSLVPPVYYADMVA 11193719
Score = 115 bits (246), Expect(2) = 7e-029
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = +1 / +2
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
NVP+GTVVD + HP +DFY+CS G IGT++PTHY++L DEIGFN + +Q+L+ L +
Sbjct: 11200679 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 11200858
Query: 370 VYQRSTTAISVVAPICYAHLAAAQ 441
+ R T +++V P+ YA AA++
Sbjct: 11200859 TFTRCTKPVALVPPVSYADKAASR 11200930
Score = 34.1 bits (68), Expect(2) = 7e-029
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 118 NPKFTLIIAQKNHHTKFF 171
NP+ T+I+AQK H T+FF
Sbjct: 11200589 NPQITVIVAQKRHQTRFF 11200642
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I,
complete sequence
Length = 87618
Score = 116 bits (249), Expect = 7e-025
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +1 / +3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
NVP+GTVVD KV HP +DFY+CSH G IGT++PTHY+ L DE+GF D +Q+L+ + +
Sbjct: 25185 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 25364
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
+ R T +S+V P+ YA + A
Sbjct: 25365 TFTRCTKPVSLVPPVYYADMVA 25430
Score = 115 bits (246), Expect(2) = 8e-029
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = +1 / +2
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
NVP+GTVVD + HP +DFY+CS G IGT++PTHY++L DEIGFN + +Q+L+ L +
Sbjct: 32390 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 32569
Query: 370 VYQRSTTAISVVAPICYAHLAAAQ 441
+ R T +++V P+ YA AA++
Sbjct: 32570 TFTRCTKPVALVPPVSYADKAASR 32641
Score = 34.1 bits (68), Expect(2) = 8e-029
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 118 NPKFTLIIAQKNHHTKFF 171
NP+ T+I+AQK H T+FF
Sbjct: 32300 NPQITVIVAQKRHQTRFF 32353
>ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G31290 mRNA, complete cds
Length = 3585
Score = 115 bits (246), Expect(2) = 8e-029
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = +1 / +1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
NVP+GTVVD + HP +DFY+CS G IGT++PTHY++L DEIGFN + +Q+L+ L +
Sbjct: 3166 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 3345
Query: 370 VYQRSTTAISVVAPICYAHLAAAQ 441
+ R T +++V P+ YA AA++
Sbjct: 3346 TFTRCTKPVALVPPVSYADKAASR 3417
Score = 34.1 bits (68), Expect(2) = 8e-029
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1 / +1
Query: 118 NPKFTLIIAQKNHHTKFF 171
NP+ T+I+AQK H T+FF
Sbjct: 3076 NPQITVIVAQKRHQTRFF 3129
>gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ31g03_f 3', mRNA
sequence
Length = 607
Score = 129 bits (276), Expect = 1e-028
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / -2
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 543 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 364
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 363 TYARCTRSVSIVPPAYYAHLAA 298
>gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL06e02F 3', mRNA sequence
Length = 575
Score = 129 bits (276), Expect = 1e-028
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / -1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 554 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 375
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 374 TYARCTRSVSIVPPAYYAHLAA 309
>gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ191b06F 3', mRNA sequence
Length = 601
Score = 129 bits (276), Expect = 1e-028
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +1 / -3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 554 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 375
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y R T ++S+V P YAHLAA
Sbjct: 374 TYARCTRSVSIVPPAYYAHLAA 309
>emb|BX943872.1| Arabidopsis thaliana T-DNA flanking sequence GK-693B05-025068,
genomic survey sequence
Length = 551
Score = 72.1 bits (151), Expect(3) = 8e-027
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1 / +1
Query: 277 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 372
GTTRPTHYH+L+DEIGF+ D LQELVHSLSYV
Sbjct: 76 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 171
Score = 65.7 bits (137), Expect(3) = 8e-027
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +1 / +1
Query: 403 VAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFF 573
VAPICYAHLAAAQ+ +KF++M VPV +P+L+ V SSMFF
Sbjct: 379 VAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVPPMPKLNTNVASSMFF 549
Score = 23.1 bits (44), Expect(3) = 8e-027
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 373 YQRSTTAISV 402
YQRSTTAIS+
Sbjct: 273 YQRSTTAISL 302
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,828,906,312
Number of Sequences: 1013581
Number of extensions: 26436792
Number of successful extensions: 156309
Number of sequences better than 1.0e-020: 65
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 57122982928
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)