TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404725.2.2
(910 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY056409.1| Arabidopsis thaliana AT3g13400/MRP15_3 mRNA,... 230 5e-059
gb|AY072225.1| Arabidopsis thaliana putative pollen specifi... 230 5e-059
gb|AY096473.1| Arabidopsis thaliana putative pollen-specifi... 230 5e-059
ref|NM_112185.2| Arabidopsis thaliana SKS13; copper ion bin... 230 5e-059
gb|BT005910.1| Arabidopsis thaliana At1g55560 gene, complet... 223 5e-057
dbj|AK118598.1| Arabidopsis thaliana At1g55560 mRNA for unk... 223 5e-057
emb|AJ249211.1|ATH249211 Arabidopsis thaliana mRNA for BNH ... 223 5e-057
ref|NM_104432.2| Arabidopsis thaliana SKS14; copper ion bin... 223 5e-057
dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosom... 174 2e-054
gb|BT003958.1| Arabidopsis thaliana clone RAFL15-11-H21 (R2... 210 4e-053
gb|BT005058.1| Arabidopsis thaliana clone U20780 putative p... 210 4e-053
ref|NM_112184.2| Arabidopsis thaliana SKS11; copper ion bin... 210 4e-053
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 169 1e-052
gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14,... 169 1e-052
gb|AF367325.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA,... 203 1e-051
ref|NM_104433.2| Arabidopsis thaliana SKS12; copper ion bin... 203 1e-051
gb|AY133602.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA,... 203 1e-051
gb|AI995603.1|AI995603 701675059 A. thaliana, Columbia Col-... 189 9e-047
gb|CD530123.1|CD530123 39L4 Arabidopsis Leaf Senescence Lib... 182 1e-044
gb|CD533976.1|CD533976 34M4 Arabidopsis Leaf Senescence Lib... 181 3e-044
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 174 3e-042
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 174 3e-042
ref|NM_102033.1| Arabidopsis thaliana SKS8; copper ion bind... 171 2e-041
gb|AI999238.1|AI999238 701555127 A. thaliana, Columbia Col-... 171 3e-041
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 169 1e-040
gb|BP643869.1|BP643869 BP643869 RAFL19 Arabidopsis thaliana... 166 1e-039
ref|NM_102034.1| Arabidopsis thaliana SKS7; copper ion bind... 166 1e-039
gb|AY081335.1| Arabidopsis thaliana pectinesterase-like pro... 164 3e-039
emb|AX507059.1| Sequence 1754 from Patent WO0216655 164 3e-039
gb|BT008899.1| Arabidopsis thaliana At4g22010 mRNA, complet... 164 3e-039
ref|NM_118322.3| Arabidopsis thaliana SKS4; copper ion bind... 164 3e-039
gb|AV544145.1|AV544145 AV544145 Arabidopsis thaliana roots ... 163 9e-039
gb|BP659146.1|BP659146 BP659146 RAFL19 Arabidopsis thaliana... 162 2e-038
gb|BX836294.1|BX836294 BX836294 Arabidopsis thaliana Hormon... 161 2e-038
gb|AV537619.1|AV537619 AV537619 Arabidopsis thaliana roots ... 161 2e-038
gb|CK118224.1|CK118224 217n04.p1 AtM1 Arabidopsis thaliana ... 161 2e-038
gb|CK118777.1|CK118777 216b24.p1 AtM1 Arabidopsis thaliana ... 161 2e-038
gb|AY057492.1| Arabidopsis thaliana At1g76160/T23E18_10 mRN... 161 2e-038
ref|NM_106265.2| Arabidopsis thaliana SKS5; copper ion bind... 161 2e-038
gb|CB261040.1|CB261040 39-E9570-012-004-M09-T7R MPIZ-ADIS-0... 160 6e-038
gb|CK117520.1|CK117520 218e09.p1 AtM1 Arabidopsis thaliana ... 160 6e-038
gb|AY059814.1| Arabidopsis thaliana Unknown protein mRNA, c... 160 6e-038
gb|AY094401.1| Arabidopsis thaliana AT5g66920/MUD21_18 mRNA... 160 6e-038
gb|AY128725.1| Arabidopsis thaliana unknown protein (At1g41... 160 6e-038
gb|BT000862.1| Arabidopsis thaliana At5g66920/MUD21_18 mRNA... 160 6e-038
emb|BX831134.1|CNS09ZEQ Arabidopsis thaliana Full-length cD... 160 6e-038
emb|CQ805442.1| Sequence 1853 from Patent WO2004035798 160 6e-038
ref|NM_103408.1| Arabidopsis thaliana SKS6; pectinesterase ... 160 6e-038
ref|NM_126091.2| Arabidopsis thaliana SKS17; copper ion bin... 160 6e-038
gb|AV537452.1|AV537452 AV537452 Arabidopsis thaliana roots ... 160 8e-038
gb|BP646385.1|BP646385 BP646385 RAFL19 Arabidopsis thaliana... 98 9e-038
gb|AY136404.1| Arabidopsis thaliana pectinesterase, putativ... 159 1e-037
gb|BT000227.1| Arabidopsis thaliana pectinesterase, putativ... 159 1e-037
gb|CD530290.1|CD530290 05J01 Arabidopsis Leaf Senescence Li... 158 2e-037
gb|AV546963.1|AV546963 AV546963 Arabidopsis thaliana roots ... 158 2e-037
gb|AY072215.1| Arabidopsis thaliana putative pectinesterase... 158 2e-037
gb|AY096593.1| Arabidopsis thaliana putative pectinesterase... 158 2e-037
emb|AX507015.1| Sequence 1710 from Patent WO0216655 158 2e-037
ref|NM_120004.3| Arabidopsis thaliana SKS9; copper ion bind... 158 2e-037
gb|AY084759.1| Arabidopsis thaliana clone 116979 mRNA, comp... 158 3e-037
gb|BP653921.1|BP653921 BP653921 RAFL19 Arabidopsis thaliana... 110 4e-037
gb|AV547447.1|AV547447 AV547447 Arabidopsis thaliana roots ... 157 5e-037
gb|AV532213.1|AV532213 AV532213 Arabidopsis thaliana flower... 156 7e-037
emb|BX817191.1|CNS0AE02 Arabidopsis thaliana Full-length cD... 155 1e-036
gb|CB254770.1|CB254770 60-E012994-019-004-H15-SP6r MPIZ-ADI... 153 7e-036
gb|BP594696.1|BP594696 BP594696 RAFL15 Arabidopsis thaliana... 108 7e-036
gb|BP640164.1|BP640164 BP640164 RAFL19 Arabidopsis thaliana... 153 9e-036
gb|AI998955.1|AI998955 701547724 A. thaliana, Columbia Col-... 152 1e-035
gb|AV558425.1|AV558425 AV558425 Arabidopsis thaliana green ... 152 1e-035
gb|BP639377.1|BP639377 BP639377 RAFL19 Arabidopsis thaliana... 152 1e-035
gb|AI994271.1|AI994271 701502007 A. thaliana, Ohio State cl... 152 2e-035
gb|BP648595.1|BP648595 BP648595 RAFL19 Arabidopsis thaliana... 152 2e-035
ref|NM_119879.2| Arabidopsis thaliana SKS15; copper ion bin... 152 2e-035
gb|AV549603.1|AV549603 AV549603 Arabidopsis thaliana roots ... 150 5e-035
ref|NM_118949.1| Arabidopsis thaliana SKS10; copper ion bin... 150 6e-035
gb|AV546304.1|AV546304 AV546304 Arabidopsis thaliana roots ... 149 9e-035
gb|AV815329.1|AV815329 AV815329 RAFL9 Arabidopsis thaliana ... 149 2e-034
gb|BP639469.1|BP639469 BP639469 RAFL19 Arabidopsis thaliana... 149 2e-034
gb|AV540166.1|AV540166 AV540166 Arabidopsis thaliana roots ... 147 6e-034
gb|BP657564.1|BP657564 BP657564 RAFL19 Arabidopsis thaliana... 147 6e-034
gb|BP655818.1|BP655818 BP655818 RAFL19 Arabidopsis thaliana... 146 8e-034
gb|AV539026.1|AV539026 AV539026 Arabidopsis thaliana roots ... 144 3e-033
gb|BP640624.1|BP640624 BP640624 RAFL19 Arabidopsis thaliana... 115 1e-032
gb|AA042225.1|AA042225 24546 CD4-13 Arabidopsis thaliana cD... 143 1e-032
gb|AV548867.1|AV548867 AV548867 Arabidopsis thaliana roots ... 143 1e-032
gb|AU230778.1|AU230778 AU230778 RAFL19 Arabidopsis thaliana... 142 1e-032
emb|BX829416.1|CNS0A1XP Arabidopsis thaliana Full-length cD... 142 2e-032
emb|BX820822.1|CNS0A83H Arabidopsis thaliana Full-length cD... 142 2e-032
ref|NM_127927.2| Arabidopsis thaliana SKS16; copper ion bin... 142 2e-032
gb|BP637078.1|BP637078 BP637078 RAFL19 Arabidopsis thaliana... 141 3e-032
gb|AV552616.1|AV552616 AV552616 Arabidopsis thaliana roots ... 141 4e-032
gb|BP640292.1|BP640292 BP640292 RAFL19 Arabidopsis thaliana... 121 2e-031
emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome ... 130 2e-031
gb|AF439406.1| Arabidopsis thaliana multi-copper oxidase-re... 138 3e-031
emb|AX506931.1| Sequence 1626 from Patent WO0216655 138 3e-031
ref|NM_117312.2| Arabidopsis thaliana SKU5; copper ion bind... 138 3e-031
emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosom... 130 4e-031
gb|AV541870.1|AV541870 AV541870 Arabidopsis thaliana roots ... 134 3e-030
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 111 3e-030
gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8... 111 4e-030
gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis tha... 111 4e-030
gb|AI996542.1|AI996542 701667381 A. thaliana, Columbia Col-... 134 4e-030
gb|BP647934.1|BP647934 BP647934 RAFL19 Arabidopsis thaliana... 98 5e-030
dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosom... 97 8e-030
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 130 3e-029
gb|AV802568.1|AV802568 AV802568 RAFL9 Arabidopsis thaliana ... 73 3e-029
gb|BP790305.1|BP790305 BP790305 RAFL7 Arabidopsis thaliana ... 130 5e-029
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 130 5e-029
gb|BP638345.1|BP638345 BP638345 RAFL19 Arabidopsis thaliana... 130 7e-029
gb|BP653520.1|BP653520 BP653520 RAFL19 Arabidopsis thaliana... 87 1e-028
gb|AY074379.1| Arabidopsis thaliana putative Pollen-specifi... 129 1e-028
gb|AY091230.1| Arabidopsis thaliana putative pollen-specifi... 129 1e-028
ref|NM_118656.3| Arabidopsis thaliana SKS1 (SKU5 SIMILAR 1)... 129 1e-028
gb|BP642092.1|BP642092 BP642092 RAFL19 Arabidopsis thaliana... 116 2e-028
gb|CB074550.1|CB074550 EST01327 Avirulent Peronospora paras... 128 2e-028
emb|AX507345.1| Sequence 2040 from Patent WO0216655 127 4e-028
gb|W43071.1|W43071 22662 Lambda-PRL2 Arabidopsis thaliana c... 127 7e-028
gb|AV793898.1|AV793898 AV793898 RAFL8 Arabidopsis thaliana ... 126 9e-028
gb|BP642279.1|BP642279 BP642279 RAFL19 Arabidopsis thaliana... 114 1e-027
gb|BP649850.1|BP649850 BP649850 RAFL19 Arabidopsis thaliana... 74 2e-027
gb|BT004129.1| Arabidopsis thaliana clone RAFL15-06-D22 (R2... 124 3e-027
gb|BT004990.1| Arabidopsis thaliana clone U20700 unknown pr... 124 3e-027
emb|BX830464.1|CNS0A1MM Arabidopsis thaliana Full-length cD... 124 3e-027
ref|NM_124220.1| Arabidopsis thaliana SKS3; copper ion bind... 124 3e-027
ref|NM_124527.3| Arabidopsis thaliana copper ion binding AT... 124 3e-027
gb|AI992516.1|AI992516 701558085 A. thaliana, Ohio State cl... 113 4e-027
gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis tha... 107 5e-027
emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ... 87 5e-027
emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosom... 87 5e-027
gb|AY088897.1| Arabidopsis thaliana clone 99023 mRNA, compl... 118 5e-027
ref|NM_106229.1| Arabidopsis thaliana SKS18; copper ion bin... 118 5e-027
emb|BX814551.1|CNS0ADPL Arabidopsis thaliana Full-length cD... 118 5e-027
gb|AC008046.4|AC008046 Arabidopsis thaliana chromosome I BA... 102 9e-027
gb|AC022456.5|AC022456 Arabidopsis thaliana chromosome 1 BA... 102 9e-027
dbj|AB062093.1| Arabidopsis thaliana DNA, chromosome 1 cent... 102 9e-027
emb|AX059475.1| Sequence 208 from Patent WO0055325 102 9e-027
emb|AX059467.1| Sequence 200 from Patent WO0055325 102 1e-026
gb|AV813039.1|AV813039 AV813039 RAFL9 Arabidopsis thaliana ... 91 1e-026
gb|BP790694.1|BP790694 BP790694 RAFL7 Arabidopsis thaliana ... 122 1e-026
gb|BP586841.1|BP586841 BP586841 RAFL15 Arabidopsis thaliana... 122 2e-026
gb|BP650649.1|BP650649 BP650649 RAFL19 Arabidopsis thaliana... 51 2e-026
gb|AV544367.1|AV544367 AV544367 Arabidopsis thaliana roots ... 120 8e-026
gb|AV541839.1|AV541839 AV541839 Arabidopsis thaliana roots ... 119 1e-025
gb|BP598501.1|BP598501 BP598501 RAFL16 Arabidopsis thaliana... 119 1e-025
gb|BP650173.1|BP650173 BP650173 RAFL19 Arabidopsis thaliana... 118 3e-025
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 100 1e-024
gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis tha... 100 1e-024
emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome... 100 1e-024
gb|T21473.1|T21473 3481 Lambda-PRL2 Arabidopsis thaliana cD... 114 4e-024
gb|BP638635.1|BP638635 BP638635 RAFL19 Arabidopsis thaliana... 72 4e-024
gb|BP619415.1|BP619415 BP619415 RAFL16 Arabidopsis thaliana... 114 5e-024
gb|AV557988.1|AV557988 AV557988 Arabidopsis thaliana green ... 113 7e-024
gb|AI994449.1|AI994449 701498347 A. thaliana, Ohio State cl... 113 9e-024
gb|AV439987.1|AV439987 AV439987 Arabidopsis thaliana above-... 113 9e-024
gb|BP654705.1|BP654705 BP654705 RAFL19 Arabidopsis thaliana... 109 1e-023
gb|AV791536.1|AV791536 AV791536 RAFL7 Arabidopsis thaliana ... 79 1e-023
emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosom... 97 2e-023
emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome ... 97 2e-023
gb|AV794098.1|AV794098 AV794098 RAFL8 Arabidopsis thaliana ... 112 2e-023
emb|AL082756.1|CNS00O4M Arabidopsis thaliana genome survey ... 97 2e-023
gb|BP640216.1|BP640216 BP640216 RAFL19 Arabidopsis thaliana... 111 2e-023
gb|AV558633.1|AV558633 AV558633 Arabidopsis thaliana green ... 110 6e-023
gb|AQ249742.1|AQ249742 T30H8-Sp6.1 TAMU Arabidopsis thalian... 75 8e-023
gb|BP604333.1|BP604333 BP604333 RAFL16 Arabidopsis thaliana... 110 9e-023
gb|AV807347.1|AV807347 AV807347 RAFL9 Arabidopsis thaliana ... 109 1e-022
gb|BP789378.1|BP789378 BP789378 RAFL7 Arabidopsis thaliana ... 109 1e-022
gb|BP643391.1|BP643391 BP643391 RAFL19 Arabidopsis thaliana... 59 3e-022
gb|AQ967962.1|AQ967962 LERIW71TR LERG Arabidopsis thaliana ... 91 6e-022
gb|BP783865.1|BP783865 BP783865 RAFL7 Arabidopsis thaliana ... 105 1e-021
gb|AV788530.1|AV788530 AV788530 RAFL6 Arabidopsis thaliana ... 104 5e-021
gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B... 86 6e-021
gb|AV793285.1|AV793285 AV793285 RAFL7 Arabidopsis thaliana ... 103 7e-021
gb|AV439870.1|AV439870 AV439870 Arabidopsis thaliana above-... 103 7e-021
gb|BP641591.1|BP641591 BP641591 RAFL19 Arabidopsis thaliana... 64 8e-021
gb|AC004482.3| Arabidopsis thaliana chromosome 2 clone F27L... 86 8e-021
>gb|AY056409.1| Arabidopsis thaliana AT3g13400/MRP15_3 mRNA, complete cds
Length = 1879
Score = 230 bits (497), Expect = 5e-059
Identities = 89/169 (52%), Positives = 116/169 (68%)
Frame = -1 / +3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ V FEN EKS+
Sbjct: 1260 TPLKLAEYFGMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQS 1439
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ +FFAV PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++R
Sbjct: 1440 FHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 1619
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
S WER+YLG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 1620 SENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 1766
Score = 158 bits (339), Expect = 3e-037
Identities = 79/173 (45%), Positives = 94/173 (54%)
Frame = +3 / -1
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 1756 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 1577
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXM 749
A DLGYT VC LT S +L + + VHLPG TAKK LFS FSK T
Sbjct: 1576 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKDCMLFSWFSKTTST 1397
Query: 750 NXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXXXXXT 908
R L TLG+ + +L G M L S KY GV T
Sbjct: 1396 KVRKVMLRTLGSTVSVVILAAGSSLMTLYLKTFSDMPKYSASFKGVSVSTCDT 1238
>gb|AY072225.1| Arabidopsis thaliana putative pollen specific protein (At3g13400)
mRNA, complete cds
Length = 1895
Score = 230 bits (497), Expect = 5e-059
Identities = 89/169 (52%), Positives = 116/169 (68%)
Frame = -1 / +3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ V FEN EKS+
Sbjct: 1260 TPLKLAEYFGMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQS 1439
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ +FFAV PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++R
Sbjct: 1440 FHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 1619
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
S WER+YLG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 1620 SENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 1766
Score = 158 bits (339), Expect = 3e-037
Identities = 79/173 (45%), Positives = 94/173 (54%)
Frame = +3 / -2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 1756 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 1577
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXM 749
A DLGYT VC LT S +L + + VHLPG TAKK LFS FSK T
Sbjct: 1576 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKDCMLFSWFSKTTST 1397
Query: 750 NXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXXXXXT 908
R L TLG+ + +L G M L S KY GV T
Sbjct: 1396 KVRKVMLRTLGSTVSVVILAAGSSLMTLYLKTFSDMPKYSASFKGVSVSTCDT 1238
>gb|AY096473.1| Arabidopsis thaliana putative pollen-specific protein (At3g13400)
mRNA, complete cds
Length = 1687
Score = 230 bits (497), Expect = 5e-059
Identities = 89/169 (52%), Positives = 116/169 (68%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ V FEN EKS+
Sbjct: 1141 TPLKLAEYFGMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQS 1320
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ +FFAV PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++R
Sbjct: 1321 FHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 1500
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
S WER+YLG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 1501 SENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 1647
Score = 158 bits (339), Expect = 3e-037
Identities = 79/173 (45%), Positives = 94/173 (54%)
Frame = +3 / -3
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 1637 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 1458
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXM 749
A DLGYT VC LT S +L + + VHLPG TAKK LFS FSK T
Sbjct: 1457 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKDCMLFSWFSKTTST 1278
Query: 750 NXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXXXXXT 908
R L TLG+ + +L G M L S KY GV T
Sbjct: 1277 KVRKVMLRTLGSTVSVVILAAGSSLMTLYLKTFSDMPKYSASFKGVSVSTCDT 1119
>ref|NM_112185.2| Arabidopsis thaliana SKS13; copper ion binding AT3G13400 (SKS13)
mRNA, complete cds
Length = 1898
Score = 230 bits (497), Expect = 5e-059
Identities = 89/169 (52%), Positives = 116/169 (68%)
Frame = -1 / +3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ V FEN EKS+
Sbjct: 1260 TPLKLAEYFGMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQS 1439
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ +FFAV PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++R
Sbjct: 1440 FHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 1619
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
S WER+YLG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 1620 SENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 1766
Score = 158 bits (339), Expect = 3e-037
Identities = 79/173 (45%), Positives = 94/173 (54%)
Frame = +3 / -2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 1756 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 1577
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXM 749
A DLGYT VC LT S +L + + VHLPG TAKK LFS FSK T
Sbjct: 1576 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKDCMLFSWFSKTTST 1397
Query: 750 NXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXXXXXT 908
R L TLG+ + +L G M L S KY GV T
Sbjct: 1396 KVRKVMLRTLGSTVSVVILAAGSSLMTLYLKTFSDMPKYSASFKGVSVSTCDT 1238
>gb|BT005910.1| Arabidopsis thaliana At1g55560 gene, complete cds
Length = 1650
Score = 223 bits (482), Expect = 5e-057
Identities = 87/169 (51%), Positives = 114/169 (67%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ + FEN EK++
Sbjct: 1138 TPLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQS 1317
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ +FFAV PG+WT R YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++R
Sbjct: 1318 FHLDGYSFFAVASEPGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 1497
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
S ER+YLGEQLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 1498 SENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHY 1644
Score = 120 bits (257), Expect(2) = 2e-030
Identities = 56/99 (56%), Positives = 67/99 (67%)
Frame = +3 / -2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++ GMLYSSLSD SG+ TLTY+CSPRY LS+ + H+PALSNV
Sbjct: 1634 GNGKPLTMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRI 1455
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKK 686
A DLG T VC LT S +L + VHLPG TAKK
Sbjct: 1454 ADQDLG*TCTVCLLTASSKL*FSLFSGVHLPGSEATAKK 1338
Score = 34.5 bits (69), Expect(2) = 2e-030
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +3 / -2
Query: 717 LFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXX 896
+FS FSK R L TLG + +L G + L S KY GV
Sbjct: 1307 VFSWFSKMISTKVRKVMLRTLGCTVNAVILAAGSSLITLYLKTFSDIWKYSASFKGVSVS 1128
Query: 897 XXXT 908
T
Sbjct: 1127 TCDT 1116
>dbj|AK118598.1| Arabidopsis thaliana At1g55560 mRNA for unknown protein, complete
cds, clone: RAFL19-84-I12
Length = 1881
Score = 223 bits (482), Expect = 5e-057
Identities = 87/169 (51%), Positives = 114/169 (67%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ + FEN EK++
Sbjct: 1247 TPLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQS 1426
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ +FFAV PG+WT R YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++R
Sbjct: 1427 FHLDGYSFFAVASEPGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 1606
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
S ER+YLGEQLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 1607 SENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHY 1753
Score = 120 bits (257), Expect(2) = 2e-030
Identities = 56/99 (56%), Positives = 67/99 (67%)
Frame = +3 / -1
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++ GMLYSSLSD SG+ TLTY+CSPRY LS+ + H+PALSNV
Sbjct: 1743 GNGKPLTMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRI 1564
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKK 686
A DLG T VC LT S +L + VHLPG TAKK
Sbjct: 1563 ADQDLG*TCTVCLLTASSKL*FSLFSGVHLPGSEATAKK 1447
Score = 34.5 bits (69), Expect(2) = 2e-030
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +3 / -1
Query: 717 LFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXX 896
+FS FSK R L TLG + +L G + L S KY GV
Sbjct: 1416 VFSWFSKMISTKVRKVMLRTLGCTVNAVILAAGSSLITLYLKTFSDIWKYSASFKGVSVS 1237
Query: 897 XXXT 908
T
Sbjct: 1236 TCDT 1225
>emb|AJ249211.1|ATH249211 Arabidopsis thaliana mRNA for BNH protein (T5A14.2 gene)
Length = 1954
Score = 223 bits (482), Expect = 5e-057
Identities = 87/169 (51%), Positives = 114/169 (67%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ + FEN EK++
Sbjct: 1273 TPLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQS 1452
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ +FFAV PG+WT R YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++R
Sbjct: 1453 FHLDGYSFFAVASEPGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 1632
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
S ER+YLGEQLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 1633 SENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHY 1779
Score = 145 bits (311), Expect = 2e-033
Identities = 75/173 (43%), Positives = 90/173 (52%)
Frame = +3 / -3
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++ GMLYSSLSD SG+ TLTY+CSPRY LS+ + H+PALSNV
Sbjct: 1769 GNGKPLTMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRI 1590
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXM 749
A DLG T VC LT S +L + VHLPG TAKK +FS FSK
Sbjct: 1589 ADQDLG*TCTVCLLTASSKL*FSLFSGVHLPGSEATAKKE*PSKWNDCMVFSWFSKMIST 1410
Query: 750 NXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXXXXXT 908
R L TLG + +L G + L S KY GV T
Sbjct: 1409 KVRKVMLRTLGCTVNAVILAAGSSLITLYLKTFSDIWKYSASFKGVSVSTCDT 1251
>ref|NM_104432.2| Arabidopsis thaliana SKS14; copper ion binding AT1G55560 (SKS14)
mRNA, complete cds
Length = 1928
Score = 223 bits (482), Expect = 5e-057
Identities = 87/169 (51%), Positives = 114/169 (67%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ + FEN EK++
Sbjct: 1265 TPLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQS 1444
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ +FFAV PG+WT R YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++R
Sbjct: 1445 FHLDGYSFFAVASEPGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 1624
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
S ER+YLGEQLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 1625 SENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHY 1771
Score = 120 bits (257), Expect(2) = 2e-030
Identities = 56/99 (56%), Positives = 67/99 (67%)
Frame = +3 / -3
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++ GMLYSSLSD SG+ TLTY+CSPRY LS+ + H+PALSNV
Sbjct: 1761 GNGKPLTMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRI 1582
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKK 686
A DLG T VC LT S +L + VHLPG TAKK
Sbjct: 1581 ADQDLG*TCTVCLLTASSKL*FSLFSGVHLPGSEATAKK 1465
Score = 34.5 bits (69), Expect(2) = 2e-030
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +3 / -3
Query: 717 LFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXX 896
+FS FSK R L TLG + +L G + L S KY GV
Sbjct: 1434 VFSWFSKMISTKVRKVMLRTLGCTVNAVILAAGSSLITLYLKTFSDIWKYSASFKGVSVS 1255
Query: 897 XXXT 908
T
Sbjct: 1254 TCDT 1243
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15
Length = 83287
Score = 174 bits (375), Expect(2) = 2e-054
Identities = 64/101 (63%), Positives = 82/101 (81%)
Frame = -1 / +1
Query: 682 FAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQY 503
F+ PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++RS WER+Y
Sbjct: 10924 FSHSSEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRY 11103
Query: 502 LGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
LG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 11104 LGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 11226
Score = 170 bits (365), Expect(2) = 3e-045
Identities = 64/95 (67%), Positives = 75/95 (78%)
Frame = -1 / -3
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG WT R YNLLD VSRHT+QVYP+ W A+++TFDN GMW+VRS ER+YLG+QLY
Sbjct: 5627 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLY 5448
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SV+SPE+SLRDEYNMPETSL+CG V G P P Y
Sbjct: 5447 ASVLSPEKSLRDEYNMPETSLQCGLVKGTPKPNPY 5343
Score = 121 bits (258), Expect(2) = 9e-033
Identities = 53/92 (57%), Positives = 65/92 (70%)
Frame = +3 / -3
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 11216 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 11037
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
A DLGYT VC LT S +L + + VHLPG
Sbjct: 11036 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPG 10941
Score = 60.6 bits (126), Expect(2) = 2e-054
Identities = 26/71 (36%), Positives = 36/71 (50%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ V FEN EKS+
Sbjct: 10609 TPLKLAEYFGMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQS 10788
Query: 706 IXIXXXAFFAV 674
+ +FFAV
Sbjct: 10789 FHLDGYSFFAV 10821
Score = 44.1 bits (90), Expect(2) = 3e-045
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -1 / -2
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAV 674
P K+ PNV++ R FI V FEN EKS+ + +FFAV
Sbjct: 5910 PEQIKSIKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAV 5773
Score = 41.8 bits (85), Expect(2) = 9e-033
Identities = 26/78 (33%), Positives = 29/78 (37%)
Frame = +3 / -3
Query: 675 TAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSX 854
TAKK LFS FSK T R L TLG+ + +L G M L S
Sbjct: 10820 TAKKE*PSKWKDCMLFSWFSKTTSTKVRKVMLRTLGSTVSVVILAAGSSLMTLYLKTFSD 10641
Query: 855 ALKYXXXLTGVXXXXXXT 908
KY GV T
Sbjct: 10640 MPKYSASFKGVSVSTCDT 10587
>gb|BT003958.1| Arabidopsis thaliana clone RAFL15-11-H21 (R20780) putative
pectinesterase (pectin methylesterase) family protein
(At3g13390) mRNA, complete cds
Length = 2083
Score = 210 bits (454), Expect = 4e-053
Identities = 83/144 (57%), Positives = 101/144 (70%)
Frame = -1 / +2
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
P K+ PNV++ R FI V FEN EKS+ + +FFAV + PG WT R
Sbjct: 1268 PEQIKSIKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKN 1447
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNLLD VSRHT+QVYP+ W A+++TFDN GMW+VRS ER+YLG+QLY SV+SPE+SLR
Sbjct: 1448 YNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLR 1627
Query: 451 DEYNMPETSLRCGKVVGLPMPPSY 380
DEYNMPETSL+CG V G P P Y
Sbjct: 1628 DEYNMPETSLQCGLVKGTPKPNPY 1699
Score = 110 bits (235), Expect(2) = 2e-024
Identities = 53/99 (53%), Positives = 61/99 (61%)
Frame = +3 / -2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G+G P T P RLVSGMLYSSLSD SG+ TL SC P+ LS+ +RT H+P LSNV
Sbjct: 1689 GLGVPFTRPHWRLVSGMLYSSLSDFSGDKTLA*SCCPK*RLSEFSDRTFHIPQLSNVSKI 1510
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKK 686
A G TW VC LT S RL + V +PG TAKK
Sbjct: 1509 AAQHFG*TWTVCLLTASSRL*FFLFSGVQVPGSTATAKK 1393
Score = 24.4 bits (47), Expect(2) = 2e-024
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2 / -1
Query: 671 ADGEKGXXXDXDXXDALLGVLEXHXDE 751
+DG++G + LL VL+ H DE
Sbjct: 1408 SDGKEGVTVQVPRLNTLLVVLKHHLDE 1328
>gb|BT005058.1| Arabidopsis thaliana clone U20780 putative pectinesterase (pectin
methylesterase) family protein (At3g13390) mRNA, complete
cds
Length = 1696
Score = 210 bits (454), Expect = 4e-053
Identities = 83/144 (57%), Positives = 101/144 (70%)
Frame = -1 / +1
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
P K+ PNV++ R FI V FEN EKS+ + +FFAV + PG WT R
Sbjct: 1222 PEQIKSIKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKN 1401
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNLLD VSRHT+QVYP+ W A+++TFDN GMW+VRS ER+YLG+QLY SV+SPE+SLR
Sbjct: 1402 YNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLR 1581
Query: 451 DEYNMPETSLRCGKVVGLPMPPSY 380
DEYNMPETSL+CG V G P P Y
Sbjct: 1582 DEYNMPETSLQCGLVKGTPKPNPY 1653
Score = 110 bits (235), Expect(2) = 2e-024
Identities = 53/99 (53%), Positives = 61/99 (61%)
Frame = +3 / -3
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G+G P T P RLVSGMLYSSLSD SG+ TL SC P+ LS+ +RT H+P LSNV
Sbjct: 1643 GLGVPFTRPHWRLVSGMLYSSLSDFSGDKTLA*SCCPK*RLSEFSDRTFHIPQLSNVSKI 1464
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKK 686
A G TW VC LT S RL + V +PG TAKK
Sbjct: 1463 AAQHFG*TWTVCLLTASSRL*FFLFSGVQVPGSTATAKK 1347
Score = 24.4 bits (47), Expect(2) = 2e-024
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2 / -2
Query: 671 ADGEKGXXXDXDXXDALLGVLEXHXDE 751
+DG++G + LL VL+ H DE
Sbjct: 1362 SDGKEGVTVQVPRLNTLLVVLKHHLDE 1282
>ref|NM_112184.2| Arabidopsis thaliana SKS11; copper ion binding AT3G13390 (SKS11)
mRNA, complete cds
Length = 2067
Score = 210 bits (454), Expect = 4e-053
Identities = 83/144 (57%), Positives = 101/144 (70%)
Frame = -1 / +2
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
P K+ PNV++ R FI V FEN EKS+ + +FFAV + PG WT R
Sbjct: 1268 PEQIKSIKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKN 1447
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNLLD VSRHT+QVYP+ W A+++TFDN GMW+VRS ER+YLG+QLY SV+SPE+SLR
Sbjct: 1448 YNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLR 1627
Query: 451 DEYNMPETSLRCGKVVGLPMPPSY 380
DEYNMPETSL+CG V G P P Y
Sbjct: 1628 DEYNMPETSLQCGLVKGTPKPNPY 1699
Score = 110 bits (235), Expect(2) = 2e-024
Identities = 53/99 (53%), Positives = 61/99 (61%)
Frame = +3 / -1
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G+G P T P RLVSGMLYSSLSD SG+ TL SC P+ LS+ +RT H+P LSNV
Sbjct: 1689 GLGVPFTRPHWRLVSGMLYSSLSDFSGDKTLA*SCCPK*RLSEFSDRTFHIPQLSNVSKI 1510
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKK 686
A G TW VC LT S RL + V +PG TAKK
Sbjct: 1509 AAQHFG*TWTVCLLTASSRL*FFLFSGVQVPGSTATAKK 1393
Score = 24.4 bits (47), Expect(2) = 2e-024
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2 / -3
Query: 671 ADGEKGXXXDXDXXDALLGVLEXHXDE 751
+DG++G + LL VL+ H DE
Sbjct: 1408 SDGKEGVTVQVPRLNTLLVVLKHHLDE 1328
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 169 bits (363), Expect(2) = 1e-052
Identities = 63/95 (66%), Positives = 78/95 (82%)
Frame = -1 / -3
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG+WT R YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++RS ER+YLGEQLY
Sbjct: 5114196 PGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLY 5114017
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
VSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 5114016 VSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHY 5113912
Score = 165 bits (354), Expect(2) = 7e-046
Identities = 62/95 (65%), Positives = 74/95 (77%)
Frame = -1 / +1
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG WT R YNLLD VSRHT+QVYP+ W A+++TFDN GMW++RS ER+YLG+QLY
Sbjct: 5118907 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLY 5119086
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SV+SPE+SLRDEYNMPETSL+CG V G P Y
Sbjct: 5119087 ASVLSPEKSLRDEYNMPETSLQCGLVKGKPKVNPY 5119191
Score = 113 bits (242), Expect = 7e-024
Identities = 52/92 (56%), Positives = 63/92 (68%)
Frame = +3 / +2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++ GMLYSSLSD SG+ TLTY+CSPRY LS+ + H+PALSNV
Sbjct: 5113922 GNGKPLTMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRI 5114101
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
A DLG T VC LT S +L + VHLPG
Sbjct: 5114102 ADQDLG*TCTVCLLTASSKL*FSLFSGVHLPG 5114197
Score = 107 bits (229), Expect(2) = 5e-027
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = -1 / -2
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP SWTA+++ DN GMW++RS W RQYLG+QLY+ V +P SLRDEY +P+ +L
Sbjct: 12819643 IQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 12819464
Query: 418 CGKVVGLPMPP 386
CG+ G P
Sbjct: 12819463 CGRASGRSTRP 12819431
Score = 105 bits (223), Expect(2) = 3e-024
Identities = 49/91 (53%), Positives = 56/91 (61%)
Frame = +3 / -1
Query: 393 IGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITA 572
+G P T P RLVSGMLYSS D SG+ TL YSC P+ LS + H+P LSNV A
Sbjct: 5119178 LGLPLTRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIA 5118999
Query: 573 VHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
LG TW VCRLT SRRL + VH+PG
Sbjct: 5118998 AQHLG*TWTVCRLTASRRL*FFLFSGVHVPG 5118906
Score = 102 bits (217), Expect(2) = 9e-027
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = -1 / -3
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP+SWTA+ + DN GMW++RS W RQYLG+QLY+ V + SLRDEY +P+ S
Sbjct: 90441 IQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 90262
Query: 418 CGKVVG 401
CG+ G
Sbjct: 90261 CGRARG 90244
Score = 60.2 bits (125), Expect(2) = 1e-052
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = -1 / -3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ + FEN EK++
Sbjct: 5114505 TPLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQS 5114326
Query: 706 IXIXXXAFFAVGMGP 662
+ +FFAV P
Sbjct: 5114325 FHLDGYSFFAVA*AP 5114281
Score = 41.8 bits (85), Expect(2) = 7e-046
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -1 / +3
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAV 674
P K+ PNV++ R FI V FEN E+S+ + +FFAV
Sbjct: 5118672 PDQIKNIKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAV 5118809
Score = 40.5 bits (82), Expect(2) = 9e-027
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1 / -3
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYP 584
M G+W SR+ YNL D VSR T+QV P
Sbjct: 90606 MDGGQWKTGSRNGYNLRDAVSRSTVQVSP 90520
Score = 35.9 bits (72), Expect(2) = 5e-027
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1 / -2
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQV 590
M G+W+ SR+ YNL D V+R T+QV
Sbjct: 12819805 MDGGQWSPDSRNEYNLRDAVARCTVQV 12819725
Score = 29.0 bits (57), Expect(2) = 3e-024
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +3 / -2
Query: 675 TAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEG 812
TAKK L S FS T M R L TLG+IL+ + G
Sbjct: 5118808 TAKKE*PSKCQDWTLLSWFSNTTSMKVR*VMLRTLGSILMFLI*SG 5118671
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence
Length = 87967
Score = 169 bits (363), Expect(2) = 1e-052
Identities = 63/95 (66%), Positives = 78/95 (82%)
Frame = -1 / +2
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG+WT R YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++RS ER+YLGEQLY
Sbjct: 16172 PGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLY 16351
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
VSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 16352 VSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHY 16456
Score = 165 bits (354), Expect(3) = 4e-047
Identities = 62/95 (65%), Positives = 74/95 (77%)
Frame = -1 / -1
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG WT R YNLLD VSRHT+QVYP+ W A+++TFDN GMW++RS ER+YLG+QLY
Sbjct: 11461 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLY 11282
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SV+SPE+SLRDEYNMPETSL+CG V G P Y
Sbjct: 11281 ASVLSPEKSLRDEYNMPETSLQCGLVKGKPKVNPY 11177
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 52/92 (56%), Positives = 63/92 (68%)
Frame = +3 / -2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++ GMLYSSLSD SG+ TLTY+CSPRY LS+ + H+PALSNV
Sbjct: 16446 GNGKPLTMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRI 16267
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
A DLG T VC LT S +L + VHLPG
Sbjct: 16266 ADQDLG*TCTVCLLTASSKL*FSLFSGVHLPG 16171
Score = 105 bits (223), Expect(2) = 4e-024
Identities = 49/91 (53%), Positives = 56/91 (61%)
Frame = +3 / +3
Query: 393 IGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITA 572
+G P T P RLVSGMLYSS D SG+ TL YSC P+ LS + H+P LSNV A
Sbjct: 11190 LGLPLTRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIA 11369
Query: 573 VHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
LG TW VCRLT SRRL + VH+PG
Sbjct: 11370 AQHLG*TWTVCRLTASRRL*FFLFSGVHVPG 11462
Score = 60.2 bits (125), Expect(2) = 1e-052
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YF FK +I P + + PNV++ FR F+ + FEN EK++
Sbjct: 15863 TPLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQS 16042
Query: 706 IXIXXXAFFAVGMGP 662
+ +FFAV P
Sbjct: 16043 FHLDGYSFFAVA*AP 16087
Score = 41.8 bits (85), Expect(3) = 4e-047
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -1 / -3
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAV 674
P K+ PNV++ R FI V FEN E+S+ + +FFAV
Sbjct: 11696 PDQIKNIKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAV 11559
Score = 34.5 bits (69), Expect(2) = 1e-025
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +3 / -2
Query: 717 LFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXX 896
+FS FSK R L TLG + +L G + L S KY GV
Sbjct: 16032 VFSWFSKMISTKVRKVMLRTLGCTVNAVILAAGSSLITLYLKTFSDIWKYSASFKGVSVS 15853
Query: 897 XXXT 908
T
Sbjct: 15852 TCDT 15841
Score = 29.0 bits (57), Expect(2) = 4e-024
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +3 / +1
Query: 675 TAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEG 812
TAKK L S FS T M R L TLG+IL+ + G
Sbjct: 11560 TAKKE*PSKCQDWTLLSWFSNTTSMKVR*VMLRTLGSILMFLI*SG 11697
Score = 22.6 bits (43), Expect(3) = 4e-047
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1 / -3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXP 812
TP+K YF FK I P
Sbjct: 11774 TPLKLAEYFGVADKVFKYDTISDNP 11700
>gb|AF367325.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA, complete cds
Length = 2088
Score = 203 bits (438), Expect(2) = 1e-051
Identities = 80/144 (55%), Positives = 100/144 (69%)
Frame = -1 / +2
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
P K+ PNV++ R FI V FEN E+S+ + +FFAV + PG WT R
Sbjct: 1340 PDQIKNIKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKN 1519
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNLLD VSRHT+QVYP+ W A+++TFDN GMW++RS ER+YLG+QLY SV+SPE+SLR
Sbjct: 1520 YNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLR 1699
Query: 451 DEYNMPETSLRCGKVVGLPMPPSY 380
DEYNMPETSL+CG V G P Y
Sbjct: 1700 DEYNMPETSLQCGLVKGKPKVNPY 1771
Score = 129 bits (277), Expect = 1e-028
Identities = 67/140 (47%), Positives = 77/140 (55%)
Frame = +3 / -1
Query: 393 IGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITA 572
+G P T P RLVSGMLYSS D SG+ TL YSC P+ LS + H+P LSNV A
Sbjct: 1758 LGLPLTRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIA 1579
Query: 573 VHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMN 752
LG TW VCRLT SRRL + VH+PG TAKK L S FS T M
Sbjct: 1578 AQHLG*TWTVCRLTASRRL*FFLFSGVHVPGSTATAKKE*PSKCQDWTLLSWFSNTTSMK 1399
Query: 753 XRNSALMTLGAILVGAVLEG 812
R L TLG+IL+ + G
Sbjct: 1398 VR*VMLRTLGSILMFLI*SG 1339
Score = 22.6 bits (43), Expect(2) = 1e-051
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXP 812
TP+K YF FK I P
Sbjct: 1262 TPLKLAEYFGVADKVFKYDTISDNP 1336
>ref|NM_104433.2| Arabidopsis thaliana SKS12; copper ion binding AT1G55570 (SKS12)
mRNA, complete cds
Length = 2083
Score = 203 bits (438), Expect(2) = 1e-051
Identities = 80/144 (55%), Positives = 100/144 (69%)
Frame = -1 / +3
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
P K+ PNV++ R FI V FEN E+S+ + +FFAV + PG WT R
Sbjct: 1335 PDQIKNIKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKN 1514
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNLLD VSRHT+QVYP+ W A+++TFDN GMW++RS ER+YLG+QLY SV+SPE+SLR
Sbjct: 1515 YNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLR 1694
Query: 451 DEYNMPETSLRCGKVVGLPMPPSY 380
DEYNMPETSL+CG V G P Y
Sbjct: 1695 DEYNMPETSLQCGLVKGKPKVNPY 1766
Score = 129 bits (277), Expect = 1e-028
Identities = 67/140 (47%), Positives = 77/140 (55%)
Frame = +3 / -1
Query: 393 IGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITA 572
+G P T P RLVSGMLYSS D SG+ TL YSC P+ LS + H+P LSNV A
Sbjct: 1753 LGLPLTRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIA 1574
Query: 573 VHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMN 752
LG TW VCRLT SRRL + VH+PG TAKK L S FS T M
Sbjct: 1573 AQHLG*TWTVCRLTASRRL*FFLFSGVHVPGSTATAKKE*PSKCQDWTLLSWFSNTTSMK 1394
Query: 753 XRNSALMTLGAILVGAVLEG 812
R L TLG+IL+ + G
Sbjct: 1393 VR*VMLRTLGSILMFLI*SG 1334
Score = 22.6 bits (43), Expect(2) = 1e-051
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1 / +3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXP 812
TP+K YF FK I P
Sbjct: 1257 TPLKLAEYFGVADKVFKYDTISDNP 1331
>gb|AY133602.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA, complete cds
Length = 1668
Score = 203 bits (438), Expect(2) = 1e-051
Identities = 80/144 (55%), Positives = 100/144 (69%)
Frame = -1 / +1
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
P K+ PNV++ R FI V FEN E+S+ + +FFAV + PG WT R
Sbjct: 1225 PDQIKNIKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKN 1404
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNLLD VSRHT+QVYP+ W A+++TFDN GMW++RS ER+YLG+QLY SV+SPE+SLR
Sbjct: 1405 YNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLR 1584
Query: 451 DEYNMPETSLRCGKVVGLPMPPSY 380
DEYNMPETSL+CG V G P Y
Sbjct: 1585 DEYNMPETSLQCGLVKGKPKVNPY 1656
Score = 129 bits (277), Expect = 1e-028
Identities = 67/140 (47%), Positives = 77/140 (55%)
Frame = +3 / -2
Query: 393 IGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITA 572
+G P T P RLVSGMLYSS D SG+ TL YSC P+ LS + H+P LSNV A
Sbjct: 1643 LGLPLTRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIA 1464
Query: 573 VHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMN 752
LG TW VCRLT SRRL + VH+PG TAKK L S FS T M
Sbjct: 1463 AQHLG*TWTVCRLTASRRL*FFLFSGVHVPGSTATAKKE*PSKCQDWTLLSWFSNTTSMK 1284
Query: 753 XRNSALMTLGAILVGAVLEG 812
R L TLG+IL+ + G
Sbjct: 1283 VR*VMLRTLGSILMFLI*SG 1224
Score = 22.6 bits (43), Expect(2) = 1e-051
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXP 812
TP+K YF FK I P
Sbjct: 1147 TPLKLAEYFGVADKVFKYDTISDNP 1221
>gb|AI995603.1|AI995603 701675059 A. thaliana, Columbia Col-0, inflorescence-1 Arabidopsis
thaliana cDNA clone 701675059, mRNA sequence
Length = 562
Score = 189 bits (408), Expect = 9e-047
Identities = 72/127 (56%), Positives = 93/127 (73%)
Frame = -1 / -2
Query: 760 FRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPR 581
FR F+ V FEN EKS+ + +F V PG+WT R+ YNLLD VSRHT+QVYP+
Sbjct: 492 FRTFVEVVFENHEKSMQSFHLDGYSFSPVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPK 313
Query: 580 SWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 401
SW+A+++TFDNAGMW++RS WER+YLG+QLYVSV+ E+SLRDEYN+P + CG V G
Sbjct: 312 SWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLYXEKSLRDEYNIPLNTNLCGIVKG 133
Query: 400 LPMPPSY 380
P+P Y
Sbjct: 132 XPLPTPY 112
Score = 127 bits (271), Expect = 7e-028
Identities = 62/123 (50%), Positives = 73/123 (59%)
Frame = +3 / +2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G P T+PQR ++SGMLYSSLSD S TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 122 GNGXPLTMPQRLVLSGMLYSSLSDFSXYRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 301
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXM 749
A DLGYT VC LT S +L + + VHLPG T +K LFS FSK T
Sbjct: 302 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPGSEATGEKE*PSKWKDCMLFSWFSKTTST 481
Query: 750 NXR 758
R
Sbjct: 482 KVR 490
>gb|CD530123.1|CD530123 39L4 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 449
Score = 182 bits (392), Expect = 1e-044
Identities = 67/103 (65%), Positives = 85/103 (82%)
Frame = -1 / -3
Query: 688 AFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWER 509
+FFAV PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++RS WER
Sbjct: 423 SFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWER 244
Query: 508 QYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
+YLG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 243 RYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 115
Score = 127 bits (273), Expect = 4e-028
Identities = 57/99 (57%), Positives = 69/99 (69%)
Frame = +3 / +2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 125 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 304
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKK 686
A DLGYT VC LT S +L + + VHLPG TAKK
Sbjct: 305 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPGSEATAKK 421
>gb|CD533976.1|CD533976 34M4 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 483
Score = 181 bits (390), Expect = 3e-044
Identities = 68/114 (59%), Positives = 87/114 (76%)
Frame = -1 / -2
Query: 721 KSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAG 542
KS+ +FF V PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAG
Sbjct: 455 KSMQSFHWDGYSFFXVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAG 276
Query: 541 MWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
MW++RS WER+YLG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 275 MWNIRSENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 114
Score = 126 bits (269), Expect = 1e-027
Identities = 56/99 (56%), Positives = 68/99 (68%)
Frame = +3 / +1
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 124 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 303
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKK 686
A DLGYT VC LT S +L + + VHLPG T KK
Sbjct: 304 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPGSEATXKK 420
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 174 bits (375), Expect = 3e-042
Identities = 64/101 (63%), Positives = 82/101 (81%)
Frame = -1 / +3
Query: 682 FAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQY 503
F+ PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++RS WER+Y
Sbjct: 4350300 FSHSSEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRY 4350479
Query: 502 LGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
LG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 4350480 LGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 4350602
Score = 170 bits (365), Expect = 7e-041
Identities = 64/95 (67%), Positives = 75/95 (78%)
Frame = -1 / -3
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG WT R YNLLD VSRHT+QVYP+ W A+++TFDN GMW+VRS ER+YLG+QLY
Sbjct: 4345003 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLY 4344824
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SV+SPE+SLRDEYNMPETSL+CG V G P P Y
Sbjct: 4344823 ASVLSPEKSLRDEYNMPETSLQCGLVKGTPKPNPY 4344719
Score = 121 bits (258), Expect = 4e-026
Identities = 53/92 (57%), Positives = 65/92 (70%)
Frame = +3 / -3
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 4350592 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 4350413
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
A DLGYT VC LT S +L + + VHLPG
Sbjct: 4350412 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPG 4350317
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 174 bits (375), Expect = 3e-042
Identities = 64/101 (63%), Positives = 82/101 (81%)
Frame = -1 / +2
Query: 682 FAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQY 503
F+ PG+WT R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++RS WER+Y
Sbjct: 4357001 FSHSSEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRY 4357180
Query: 502 LGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
LG+QLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 4357181 LGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 4357303
Score = 170 bits (365), Expect = 7e-041
Identities = 64/95 (67%), Positives = 75/95 (78%)
Frame = -1 / -3
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG WT R YNLLD VSRHT+QVYP+ W A+++TFDN GMW+VRS ER+YLG+QLY
Sbjct: 4351704 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLY 4351525
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SV+SPE+SLRDEYNMPETSL+CG V G P P Y
Sbjct: 4351524 ASVLSPEKSLRDEYNMPETSLQCGLVKGTPKPNPY 4351420
Score = 121 bits (258), Expect = 4e-026
Identities = 53/92 (57%), Positives = 65/92 (70%)
Frame = +3 / -3
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 4357293 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 4357114
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
A DLGYT VC LT S +L + + VHLPG
Sbjct: 4357113 ADQDLGYTCTVCLLTASSKL*LFLFSGVHLPG 4357018
>ref|NM_102033.1| Arabidopsis thaliana SKS8; copper ion binding AT1G21850 (SKS8) mRNA,
complete cds
Length = 1656
Score = 171 bits (369), Expect = 2e-041
Identities = 64/126 (50%), Positives = 89/126 (70%)
Frame = -1 / +1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ +++ F+ + FEN E + + +FF VGM GKW+AASR YNL D VSR T
Sbjct: 1228 SVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFFVVGMELGKWSAASRKVYNLNDAVSRCT 1407
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYPRSWTA+ ++ DN GMW++RS +WERQYLG+Q Y+ V +P SLRDEY +P+ +L
Sbjct: 1408 VQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPSTSLRDEYLIPKNALL 1587
Query: 418 CGKVVG 401
CG+ G
Sbjct: 1588 CGRATG 1605
>gb|AI999238.1|AI999238 701555127 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701555127, mRNA sequence
Length = 607
Score = 171 bits (368), Expect = 3e-041
Identities = 67/119 (56%), Positives = 83/119 (69%)
Frame = -1 / -3
Query: 736 FENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMT 557
F P + I V PG+WT R YNLLD VSRHT+QVYP+SW+A+++T
Sbjct: 470 FREP*EDHAVISFGWLLLLPVASEPGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLT 291
Query: 556 FDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
FDNAGMW++RS ER+YLGEQLYVSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 290 FDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHY 114
Score = 116 bits (248), Expect(2) = 3e-026
Identities = 53/100 (53%), Positives = 67/100 (67%)
Frame = +3 / +1
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++ GMLYSSLSD SG+ TLTY+CSPRY LS+ + H+PALSNV
Sbjct: 124 GNGKPLTMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRI 303
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKA 689
A DLG T VC LT S +L + VHLPG T +++
Sbjct: 304 ADQDLG*TCTVCLLTASSKL*FSLFSGVHLPGSEATGRRS 423
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 14/50 (28%), Positives = 18/50 (36%)
Frame = +3 / +3
Query: 717 LFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKY 866
+F FSK R L TLG + + G + L S KY
Sbjct: 450 VFLWFSKMISTKVRKVMLRTLGCTVNAVIXAAGSSLITLYLKTFSDIWKY 599
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 169 bits (363), Expect = 1e-040
Identities = 63/95 (66%), Positives = 78/95 (82%)
Frame = -1 / -1
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG+WT R YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++RS ER+YLGEQLY
Sbjct: 20758430 PGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLY 20758251
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
VSV+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 20758250 VSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHY 20758146
Score = 165 bits (354), Expect = 2e-039
Identities = 62/95 (65%), Positives = 74/95 (77%)
Frame = -1 / +3
Query: 664 PGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLY 485
PG WT R YNLLD VSRHT+QVYP+ W A+++TFDN GMW++RS ER+YLG+QLY
Sbjct: 20763141 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLY 20763320
Query: 484 VSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SV+SPE+SLRDEYNMPETSL+CG V G P Y
Sbjct: 20763321 ASVLSPEKSLRDEYNMPETSLQCGLVKGKPKVNPY 20763425
Score = 113 bits (242), Expect = 7e-024
Identities = 52/92 (56%), Positives = 63/92 (68%)
Frame = +3 / +1
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++ GMLYSSLSD SG+ TLTY+CSPRY LS+ + H+PALSNV
Sbjct: 20758156 GNGKPLTMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRI 20758335
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
A DLG T VC LT S +L + VHLPG
Sbjct: 20758336 ADQDLG*TCTVCLLTASSKL*FSLFSGVHLPG 20758431
Score = 111 bits (236), Expect = 5e-023
Identities = 38/66 (57%), Positives = 52/66 (78%)
Frame = -1 / -2
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYPRSWTA+ ++ DN GMW++RS +WERQYLG+Q Y+ V +P SLRDEY +P+ +L
Sbjct: 7668040 VQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPSTSLRDEYLIPKNALL 7667861
Query: 418 CGKVVG 401
CG+ G
Sbjct: 7667860 CGRATG 7667843
Score = 107 bits (229), Expect = 4e-022
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = -1 / -2
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP SWTA+++ DN GMW++RS W RQYLG+QLY+ V +P SLRDEY +P+ +L
Sbjct: 28583323 IQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 28583144
Query: 418 CGKVVGLPMPP 386
CG+ G P
Sbjct: 28583143 CGRASGRSTRP 28583111
Score = 105 bits (223), Expect = 3e-021
Identities = 49/91 (53%), Positives = 56/91 (61%)
Frame = +3 / -2
Query: 393 IGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITA 572
+G P T P RLVSGMLYSS D SG+ TL YSC P+ LS + H+P LSNV A
Sbjct: 20763412 LGLPLTRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIA 20763233
Query: 573 VHDLGYTWIVCRLTVSRRLYVLRDAAVHLPG 665
LG TW VCRLT SRRL + VH+PG
Sbjct: 20763232 AQHLG*TWTVCRLTASRRL*FFLFSGVHVPG 20763140
>gb|BP643869.1|BP643869 BP643869 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-63-H17 3',
mRNA sequence
Length = 410
Score = 166 bits (356), Expect = 1e-039
Identities = 60/92 (65%), Positives = 77/92 (83%)
Frame = -1 / -3
Query: 655 WTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSV 476
WT R+ YNLLD V+RHT+QVYP+SW+A+++TFDNAGMW++RS WER+YLG+QLYVSV
Sbjct: 408 WTPEKRNNYNLLDAVTRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSV 229
Query: 475 ISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
+SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 228 LSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 133
Score = 111 bits (238), Expect = 2e-023
Identities = 49/89 (55%), Positives = 62/89 (69%)
Frame = +3 / +2
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 143 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 322
Query: 570 AVHDLGYTWIVCRLTVSRRLYVLRDAAVH 656
A DLGYT VC +T S +L + + VH
Sbjct: 323 ADQDLGYTCTVCLVTASSKL*LFLFSGVH 409
>ref|NM_102034.1| Arabidopsis thaliana SKS7; copper ion binding AT1G21860 (SKS7) mRNA,
complete cds
Length = 1617
Score = 166 bits (356), Expect = 1e-039
Identities = 64/123 (52%), Positives = 85/123 (69%)
Frame = -1 / +1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ V FEN E + + +F+ VGM GKW+ ASR YNL D + R T
Sbjct: 1228 SVMQADFRAFVEVIFENSEDIVQSWHLDGYSFYVVGMELGKWSPASRKVYNLNDAILRCT 1407
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYPRSWTA+ + DN GMW++RS IWERQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 1408 IQVYPRSWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALL 1587
Query: 418 CGK 410
CG+
Sbjct: 1588 CGR 1596
>gb|AY081335.1| Arabidopsis thaliana pectinesterase-like protein (At4g22010) mRNA,
complete cds
Length = 1980
Score = 164 bits (353), Expect = 3e-039
Identities = 65/137 (47%), Positives = 87/137 (63%)
Frame = -1 / +1
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
PS + +V++A FR FI V F+N E S+ + +FF VGM G+WT SR+
Sbjct: 1300 PSGGNGGYLQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAK 1479
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNL D VSR T+QVYPR+WTA+ + DN GMW++RS W RQYLG+Q Y+ V + S R
Sbjct: 1480 YNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYR 1659
Query: 451 DEYNMPETSLRCGKVVG 401
DEY P+ +L CG+ G
Sbjct: 1660 DEYPPPKNALMCGRAKG 1710
>emb|AX507059.1| Sequence 1754 from Patent WO0216655
Length = 1626
Score = 164 bits (353), Expect = 3e-039
Identities = 65/137 (47%), Positives = 87/137 (63%)
Frame = -1 / +1
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
PS + +V++A FR FI V F+N E S+ + +FF VGM G+WT SR+
Sbjct: 1195 PSGGNGGYLQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAK 1374
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNL D VSR T+QVYPR+WTA+ + DN GMW++RS W RQYLG+Q Y+ V + S R
Sbjct: 1375 YNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYR 1554
Query: 451 DEYNMPETSLRCGKVVG 401
DEY P+ +L CG+ G
Sbjct: 1555 DEYPPPKNALMCGRAKG 1605
>gb|BT008899.1| Arabidopsis thaliana At4g22010 mRNA, complete cds
Length = 1626
Score = 164 bits (353), Expect = 3e-039
Identities = 65/137 (47%), Positives = 87/137 (63%)
Frame = -1 / +1
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
PS + +V++A FR FI V F+N E S+ + +FF VGM G+WT SR+
Sbjct: 1195 PSGGNGGYLQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAK 1374
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNL D VSR T+QVYPR+WTA+ + DN GMW++RS W RQYLG+Q Y+ V + S R
Sbjct: 1375 YNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYR 1554
Query: 451 DEYNMPETSLRCGKVVG 401
DEY P+ +L CG+ G
Sbjct: 1555 DEYPPPKNALMCGRAKG 1605
>ref|NM_118322.3| Arabidopsis thaliana SKS4; copper ion binding AT4G22010 (SKS4) mRNA,
complete cds
Length = 1983
Score = 164 bits (353), Expect = 3e-039
Identities = 65/137 (47%), Positives = 87/137 (63%)
Frame = -1 / +1
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
PS + +V++A FR FI V F+N E S+ + +FF VGM G+WT SR+
Sbjct: 1300 PSGGNGGYLQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAK 1479
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNL D VSR T+QVYPR+WTA+ + DN GMW++RS W RQYLG+Q Y+ V + S R
Sbjct: 1480 YNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYR 1659
Query: 451 DEYNMPETSLRCGKVVG 401
DEY P+ +L CG+ G
Sbjct: 1660 DEYPPPKNALMCGRAKG 1710
>gb|AV544145.1|AV544145 AV544145 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ34e12F 3', mRNA sequence
Length = 619
Score = 163 bits (350), Expect = 9e-039
Identities = 65/137 (47%), Positives = 87/137 (63%)
Frame = -1 / -3
Query: 811 PSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRST 632
PS + +V++A FR FI V F+N E S+ + +FF VGM G+WT SR+
Sbjct: 515 PSGGNGGYLQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAK 336
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNL D VSR T+QVYPR+WTA+ + DN GMW++RS W RQYLG+Q Y+ V + S R
Sbjct: 335 YNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSDR 156
Query: 451 DEYNMPETSLRCGKVVG 401
DEY P+ +L CG+ G
Sbjct: 155 DEYPPPKNALMCGRAKG 105
>gb|BP659146.1|BP659146 BP659146 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-38-E19 3',
mRNA sequence
Length = 379
Score = 162 bits (348), Expect = 2e-038
Identities = 60/91 (65%), Positives = 76/91 (83%)
Frame = -1 / -3
Query: 652 TAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVI 473
T R+ YNLLD VSRHT+QVYP+SW+A+++TFDNAGMW++RS WER+YLG+QLYVSV+
Sbjct: 377 TPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVL 198
Query: 472 SPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SPE+SLRDEYN+P + CG V GLP+P Y
Sbjct: 197 SPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 105
Score = 116 bits (249), Expect = 7e-025
Identities = 49/80 (61%), Positives = 59/80 (73%)
Frame = +3 / +1
Query: 390 GIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIIT 569
G G+P T+PQR ++SGMLYSSLSD SG+ TLTY+C P+Y LSQ + H+PALSNV
Sbjct: 115 GNGKPLTMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRM 294
Query: 570 AVHDLGYTWIVCRLTVSRRL 629
A DLGYTW VC LT S +L
Sbjct: 295 ADQDLGYTWTVCLLTASSKL 354
>gb|BX836294.1|BX836294 BX836294 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH72ZB11 3PRIM,
mRNA sequence
Length = 814
Score = 161 bits (347), Expect = 2e-038
Identities = 60/131 (45%), Positives = 87/131 (66%)
Frame = -1 / -1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R F+ + FEN E + + +F+ VGM G+W+ SR+ YNL D V+R T
Sbjct: 553 SVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVNRCT 374
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP SWTA+++ DN GMW++RS W RQYLG+QLY+ V +P SLRDEY +P+ +L
Sbjct: 373 VQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 194
Query: 418 CGKVVGLPMPP 386
CG+ G P
Sbjct: 193 CGRASGRSTRP 161
Score = 107 bits (228), Expect = 6e-022
Identities = 51/117 (43%), Positives = 66/117 (56%)
Frame = +3 / +3
Query: 387 GGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVII 566
G + RP LPQRR G+ YSSL + G T Y+C P+YCL+Q + H+P LS+ I
Sbjct: 162 GLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAIN 341
Query: 567 TAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSK 737
AVH+LGYT V R T SRRLY + +H P +PT +K + S FSK
Sbjct: 342 IAVHELGYT*TVQRFTASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSK 512
>gb|AV537619.1|AV537619 AV537619 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09h05F 3', mRNA sequence
Length = 602
Score = 161 bits (347), Expect = 2e-038
Identities = 60/131 (45%), Positives = 87/131 (66%)
Frame = -1 / -1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R F+ + FEN E + + +F+ VGM G+W+ SR+ YNL D V+R T
Sbjct: 587 SVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARCT 408
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP SWTA+++ DN GMW++RS W RQYLG+QLY+ V +P SLRDEY +P+ +L
Sbjct: 407 VQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 228
Query: 418 CGKVVGLPMPP 386
CG+ G P
Sbjct: 227 CGRASGRSTRP 195
Score = 106 bits (227), Expect = 8e-022
Identities = 51/117 (43%), Positives = 66/117 (56%)
Frame = +3 / +1
Query: 387 GGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVII 566
G + RP LPQRR G+ YSSL + G T Y+C P+YCL+Q + H+P LS+ I
Sbjct: 196 GLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAIN 375
Query: 567 TAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSK 737
AVH+LGYT V R T SRRLY + +H P +PT +K + S FSK
Sbjct: 376 IAVHELGYT*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSK 546
>gb|CK118224.1|CK118224 217n04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N04217
5-PRIME, mRNA sequence
Length = 558
Score = 161 bits (347), Expect = 2e-038
Identities = 60/131 (45%), Positives = 87/131 (66%)
Frame = -1 / +3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R F+ + FEN E + + +F+ VGM G+W+ SR+ YNL D V+R T
Sbjct: 51 SVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARCT 230
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP SWTA+++ DN GMW++RS W RQYLG+QLY+ V +P SLRDEY +P+ +L
Sbjct: 231 VQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 410
Query: 418 CGKVVGLPMPP 386
CG+ G P
Sbjct: 411 CGRASGRSTRP 443
Score = 106 bits (227), Expect = 8e-022
Identities = 51/117 (43%), Positives = 66/117 (56%)
Frame = +3 / -3
Query: 387 GGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVII 566
G + RP LPQRR G+ YSSL + G T Y+C P+YCL+Q + H+P LS+ I
Sbjct: 442 GLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAIN 263
Query: 567 TAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSK 737
AVH+LGYT V R T SRRLY + +H P +PT +K + S FSK
Sbjct: 262 IAVHELGYT*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSK 92
>gb|CK118777.1|CK118777 216b24.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B24216
5-PRIME, mRNA sequence
Length = 673
Score = 161 bits (347), Expect = 2e-038
Identities = 60/131 (45%), Positives = 87/131 (66%)
Frame = -1 / +3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R F+ + FEN E + + +F+ VGM G+W+ SR+ YNL D V+R T
Sbjct: 21 SVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARCT 200
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP SWTA+++ DN GMW++RS W RQYLG+QLY+ V +P SLRDEY +P+ +L
Sbjct: 201 VQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 380
Query: 418 CGKVVGLPMPP 386
CG+ G P
Sbjct: 381 CGRASGRSTRP 413
Score = 106 bits (227), Expect = 8e-022
Identities = 51/117 (43%), Positives = 66/117 (56%)
Frame = +3 / -1
Query: 387 GGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVII 566
G + RP LPQRR G+ YSSL + G T Y+C P+YCL+Q + H+P LS+ I
Sbjct: 412 GLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAIN 233
Query: 567 TAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSK 737
AVH+LGYT V R T SRRLY + +H P +PT +K + S FSK
Sbjct: 232 IAVHELGYT*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSK 62
>gb|AY057492.1| Arabidopsis thaliana At1g76160/T23E18_10 mRNA, complete cds
Length = 1934
Score = 161 bits (347), Expect = 2e-038
Identities = 60/131 (45%), Positives = 87/131 (66%)
Frame = -1 / +1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R F+ + FEN E + + +F+ VGM G+W+ SR+ YNL D V+R T
Sbjct: 1294 SVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARCT 1473
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP SWTA+++ DN GMW++RS W RQYLG+QLY+ V +P SLRDEY +P+ +L
Sbjct: 1474 VQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 1653
Query: 418 CGKVVGLPMPP 386
CG+ G P
Sbjct: 1654 CGRASGRSTRP 1686
Score = 106 bits (227), Expect = 8e-022
Identities = 51/117 (43%), Positives = 66/117 (56%)
Frame = +3 / -1
Query: 387 GGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVII 566
G + RP LPQRR G+ YSSL + G T Y+C P+YCL+Q + H+P LS+ I
Sbjct: 1685 GLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAIN 1506
Query: 567 TAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSK 737
AVH+LGYT V R T SRRLY + +H P +PT +K + S FSK
Sbjct: 1505 IAVHELGYT*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSK 1335
>ref|NM_106265.2| Arabidopsis thaliana SKS5; copper ion binding AT1G76160 (SKS5) mRNA,
complete cds
Length = 1987
Score = 161 bits (347), Expect = 2e-038
Identities = 60/131 (45%), Positives = 87/131 (66%)
Frame = -1 / +3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R F+ + FEN E + + +F+ VGM G+W+ SR+ YNL D V+R T
Sbjct: 1320 SVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARCT 1499
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP SWTA+++ DN GMW++RS W RQYLG+QLY+ V +P SLRDEY +P+ +L
Sbjct: 1500 VQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 1679
Query: 418 CGKVVGLPMPP 386
CG+ G P
Sbjct: 1680 CGRASGRSTRP 1712
Score = 106 bits (227), Expect = 8e-022
Identities = 51/117 (43%), Positives = 66/117 (56%)
Frame = +3 / -1
Query: 387 GGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVII 566
G + RP LPQRR G+ YSSL + G T Y+C P+YCL+Q + H+P LS+ I
Sbjct: 1711 GLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAIN 1532
Query: 567 TAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSK 737
AVH+LGYT V R T SRRLY + +H P +PT +K + S FSK
Sbjct: 1531 IAVHELGYT*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSK 1361
>gb|CB261040.1|CB261040 39-E9570-012-004-M09-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769M094Q 5-PRIME, mRNA sequence
Length = 702
Score = 160 bits (344), Expect = 6e-038
Identities = 60/126 (47%), Positives = 83/126 (65%)
Frame = -1 / +1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R FI + FEN E + + +F+ VGM G+W SR+ YNL D VSR T
Sbjct: 160 SVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGYNLRDAVSRST 339
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP+SWTA+ + DN GMW++RS W RQYLG+QLY+ V + SLRDEY +P+ S
Sbjct: 340 VQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 519
Query: 418 CGKVVG 401
CG+ G
Sbjct: 520 CGRARG 537
>gb|CK117520.1|CK117520 218e09.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011E09218
5-PRIME, mRNA sequence
Length = 770
Score = 160 bits (344), Expect = 6e-038
Identities = 60/126 (47%), Positives = 83/126 (65%)
Frame = -1 / +3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R FI + FEN E + + +F+ VGM G+W SR+ YNL D VSR T
Sbjct: 384 SVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGYNLRDAVSRST 563
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP+SWTA+ + DN GMW++RS W RQYLG+QLY+ V + SLRDEY +P+ S
Sbjct: 564 VQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 743
Query: 418 CGKVVG 401
CG+ G
Sbjct: 744 CGRARG 761
>gb|AY059814.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
Length = 1963
Score = 160 bits (344), Expect = 6e-038
Identities = 60/126 (47%), Positives = 83/126 (65%)
Frame = -1 / +3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R FI + FEN E + + +F+ VGM G+W SR+ YNL D VSR T
Sbjct: 1290 SVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWETGSRNGYNLRDAVSRST 1469
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP+SWTA+ + DN GMW++RS W RQYLG+QLY+ V + SLRDEY +P+ S
Sbjct: 1470 VQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 1649
Query: 418 CGKVVG 401
CG+ G
Sbjct: 1650 CGRARG 1667
>gb|AY094401.1| Arabidopsis thaliana AT5g66920/MUD21_18 mRNA, complete cds
Length = 2010
Score = 160 bits (344), Expect = 6e-038
Identities = 60/135 (44%), Positives = 88/135 (65%)
Frame = -1 / +3
Query: 805 NTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYN 626
+ +P +A +V+ F+ + F+N EKS+ + F+ VG G G+WT A RS +N
Sbjct: 1338 SNSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHN 1517
Query: 625 LLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDE 446
L+D ++RHT QVYP SWT ++++ DN GMW++RS IWERQY G+Q Y+ V + +SL +E
Sbjct: 1518 LVDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANE 1697
Query: 445 YNMPETSLRCGKVVG 401
YN P+ CGK VG
Sbjct: 1698 YNPPDNLQLCGKAVG 1742
>gb|AY128725.1| Arabidopsis thaliana unknown protein (At1g41830) mRNA, complete cds
Length = 1666
Score = 160 bits (344), Expect = 6e-038
Identities = 60/126 (47%), Positives = 83/126 (65%)
Frame = -1 / +1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R FI + FEN E + + +F+ VGM G+W SR+ YNL D VSR T
Sbjct: 1231 SVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWETGSRNGYNLRDAVSRST 1410
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP+SWTA+ + DN GMW++RS W RQYLG+QLY+ V + SLRDEY +P+ S
Sbjct: 1411 VQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 1590
Query: 418 CGKVVG 401
CG+ G
Sbjct: 1591 CGRARG 1608
>gb|BT000862.1| Arabidopsis thaliana At5g66920/MUD21_18 mRNA, complete cds
Length = 1641
Score = 160 bits (344), Expect = 6e-038
Identities = 60/135 (44%), Positives = 88/135 (65%)
Frame = -1 / +1
Query: 805 NTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYN 626
+ +P +A +V+ F+ + F+N EKS+ + F+ VG G G+WT A RS +N
Sbjct: 1225 SNSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHN 1404
Query: 625 LLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDE 446
L+D ++RHT QVYP SWT ++++ DN GMW++RS IWERQY G+Q Y+ V + +SL +E
Sbjct: 1405 LVDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANE 1584
Query: 445 YNMPETSLRCGKVVG 401
YN P+ CGK VG
Sbjct: 1585 YNPPDNLQLCGKAVG 1629
>emb|BX831134.1|CNS09ZEQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS5ZH03 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1832
Score = 160 bits (344), Expect = 6e-038
Identities = 60/135 (44%), Positives = 88/135 (65%)
Frame = -1 / +2
Query: 805 NTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYN 626
+ +P +A +V+ F+ + F+N EKS+ + F+ VG G G+WT A RS +N
Sbjct: 1283 SNSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHN 1462
Query: 625 LLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDE 446
L+D ++RHT QVYP SWT ++++ DN GMW++RS IWERQY G+Q Y+ V + +SL +E
Sbjct: 1463 LVDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANE 1642
Query: 445 YNMPETSLRCGKVVG 401
YN P+ CGK VG
Sbjct: 1643 YNPPDNLQLCGKAVG 1687
>emb|CQ805442.1| Sequence 1853 from Patent WO2004035798
Length = 1629
Score = 160 bits (344), Expect = 6e-038
Identities = 60/126 (47%), Positives = 83/126 (65%)
Frame = -1 / +1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R FI + FEN E + + +F+ VGM G+W SR+ YNL D VSR T
Sbjct: 1231 SVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGYNLRDAVSRST 1410
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP+SWTA+ + DN GMW++RS W RQYLG+QLY+ V + SLRDEY +P+ S
Sbjct: 1411 VQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 1590
Query: 418 CGKVVG 401
CG+ G
Sbjct: 1591 CGRARG 1608
>ref|NM_103408.1| Arabidopsis thaliana SKS6; pectinesterase AT1G41830 (SKS6) mRNA,
complete cds
Length = 1963
Score = 160 bits (344), Expect = 6e-038
Identities = 60/126 (47%), Positives = 83/126 (65%)
Frame = -1 / +3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ ++R FI + FEN E + + +F+ VGM G+W SR+ YNL D VSR T
Sbjct: 1290 SVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGYNLRDAVSRST 1469
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP+SWTA+ + DN GMW++RS W RQYLG+QLY+ V + SLRDEY +P+ S
Sbjct: 1470 VQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 1649
Query: 418 CGKVVG 401
CG+ G
Sbjct: 1650 CGRARG 1667
>ref|NM_126091.2| Arabidopsis thaliana SKS17; copper ion binding AT5G66920 (SKS17)
mRNA, complete cds
Length = 2010
Score = 160 bits (344), Expect = 6e-038
Identities = 60/135 (44%), Positives = 88/135 (65%)
Frame = -1 / +3
Query: 805 NTAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYN 626
+ +P +A +V+ F+ + F+N EKS+ + F+ VG G G+WT A RS +N
Sbjct: 1338 SNSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHN 1517
Query: 625 LLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDE 446
L+D ++RHT QVYP SWT ++++ DN GMW++RS IWERQY G+Q Y+ V + +SL +E
Sbjct: 1518 LVDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANE 1697
Query: 445 YNMPETSLRCGKVVG 401
YN P+ CGK VG
Sbjct: 1698 YNPPDNLQLCGKAVG 1742
>gb|AV537452.1|AV537452 AV537452 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ06c11F 3', mRNA sequence
Length = 617
Score = 160 bits (343), Expect = 8e-038
Identities = 60/133 (45%), Positives = 87/133 (65%)
Frame = -1 / -2
Query: 799 APTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLL 620
+P +A +V+ F+ + F+N EKS+ + F+ VG G G+WT A RS +NL+
Sbjct: 613 SPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNLV 434
Query: 619 DTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYN 440
D ++RHT QVYP SWT ++++ DN GMW++RS IWERQY G+Q Y+ V + +SL +EYN
Sbjct: 433 DALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEYN 254
Query: 439 MPETSLRCGKVVG 401
P+ CGK VG
Sbjct: 253 PPDNLQLCGKAVG 215
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,349,333,498
Number of Sequences: 1013581
Number of extensions: 17099309
Number of successful extensions: 168874
Number of sequences better than 1.0e-020: 196
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 60570059484
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)