TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276642.2.1
(1062 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_117312.2| Arabidopsis thaliana SKU5; copper ion bind... 263 3e-074
gb|AF439406.1| Arabidopsis thaliana multi-copper oxidase-re... 263 3e-074
emb|AX506931.1| Sequence 1626 from Patent WO0216655 263 3e-074
ref|NM_124220.1| Arabidopsis thaliana SKS3; copper ion bind... 252 2e-065
gb|AY074379.1| Arabidopsis thaliana putative Pollen-specifi... 221 8e-062
ref|NM_118656.3| Arabidopsis thaliana SKS1 (SKU5 SIMILAR 1)... 221 8e-062
gb|AY091230.1| Arabidopsis thaliana putative pollen-specifi... 221 8e-062
emb|AX507345.1| Sequence 2040 from Patent WO0216655 221 3e-061
gb|BT004129.1| Arabidopsis thaliana clone RAFL15-06-D22 (R2... 193 6e-058
ref|NM_124527.3| Arabidopsis thaliana copper ion binding AT... 193 6e-058
gb|BT004990.1| Arabidopsis thaliana clone U20700 unknown pr... 193 6e-058
emb|BX830464.1|CNS0A1MM Arabidopsis thaliana Full-length cD... 193 2e-057
dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosom... 109 1e-056
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 111 8e-054
emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosom... 111 9e-054
emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome ... 111 9e-054
emb|AL080318.1|ATT4C9 Arabidopsis thaliana DNA chromosome 4... 111 9e-054
emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosom... 100 1e-052
emb|AL035396.1|ATF24A6 Arabidopsis thaliana DNA chromosome ... 100 1e-052
dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosom... 90 3e-051
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 109 3e-041
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 109 3e-041
gb|AV439870.1|AV439870 AV439870 Arabidopsis thaliana above-... 153 2e-040
ref|NM_102033.1| Arabidopsis thaliana SKS8; copper ion bind... 151 4e-037
gb|AY072215.1| Arabidopsis thaliana putative pectinesterase... 149 7e-037
ref|NM_120004.3| Arabidopsis thaliana SKS9; copper ion bind... 149 7e-037
gb|AY096593.1| Arabidopsis thaliana putative pectinesterase... 149 7e-037
emb|AX507015.1| Sequence 1710 from Patent WO0216655 149 7e-037
gb|BX836294.1|BX836294 BX836294 Arabidopsis thaliana Hormon... 156 9e-037
gb|AV549603.1|AV549603 AV549603 Arabidopsis thaliana roots ... 156 9e-037
gb|CK118224.1|CK118224 217n04.p1 AtM1 Arabidopsis thaliana ... 156 9e-037
gb|AY057492.1| Arabidopsis thaliana At1g76160/T23E18_10 mRN... 156 9e-037
ref|NM_106265.2| Arabidopsis thaliana SKS5; copper ion bind... 156 9e-037
gb|AY136404.1| Arabidopsis thaliana pectinesterase, putativ... 155 2e-036
gb|BT000227.1| Arabidopsis thaliana pectinesterase, putativ... 155 2e-036
gb|AY059814.1| Arabidopsis thaliana Unknown protein mRNA, c... 146 3e-036
ref|NM_103408.1| Arabidopsis thaliana SKS6; pectinesterase ... 146 3e-036
gb|AY128725.1| Arabidopsis thaliana unknown protein (At1g41... 146 3e-036
emb|CQ805442.1| Sequence 1853 from Patent WO2004035798 146 3e-036
gb|CK117520.1|CK117520 218e09.p1 AtM1 Arabidopsis thaliana ... 146 3e-036
gb|CB261040.1|CB261040 39-E9570-012-004-M09-T7R MPIZ-ADIS-0... 146 3e-036
gb|AV537619.1|AV537619 AV537619 Arabidopsis thaliana roots ... 154 4e-036
gb|CK118777.1|CK118777 216b24.p1 AtM1 Arabidopsis thaliana ... 154 4e-036
ref|NM_118322.3| Arabidopsis thaliana SKS4; copper ion bind... 147 5e-036
gb|AY081335.1| Arabidopsis thaliana pectinesterase-like pro... 147 5e-036
emb|AX507059.1| Sequence 1754 from Patent WO0216655 147 5e-036
gb|BT008899.1| Arabidopsis thaliana At4g22010 mRNA, complet... 147 5e-036
gb|AY088897.1| Arabidopsis thaliana clone 99023 mRNA, compl... 153 8e-036
emb|BX814551.1|CNS0ADPL Arabidopsis thaliana Full-length cD... 153 8e-036
ref|NM_106229.1| Arabidopsis thaliana SKS18; copper ion bin... 153 8e-036
gb|AV544145.1|AV544145 AV544145 Arabidopsis thaliana roots ... 146 1e-035
gb|AV552616.1|AV552616 AV552616 Arabidopsis thaliana roots ... 146 1e-035
ref|NM_118949.1| Arabidopsis thaliana SKS10; copper ion bin... 141 4e-035
gb|CB074550.1|CB074550 EST01327 Avirulent Peronospora paras... 149 1e-034
gb|CD530290.1|CD530290 05J01 Arabidopsis Leaf Senescence Li... 149 1e-034
gb|AV546963.1|AV546963 AV546963 Arabidopsis thaliana roots ... 149 1e-034
emb|BX817191.1|CNS0AE02 Arabidopsis thaliana Full-length cD... 140 3e-034
gb|CB254770.1|CB254770 60-E012994-019-004-H15-SP6r MPIZ-ADI... 146 9e-034
gb|AY084759.1| Arabidopsis thaliana clone 116979 mRNA, comp... 146 9e-034
gb|AY094401.1| Arabidopsis thaliana AT5g66920/MUD21_18 mRNA... 146 1e-033
gb|BT000862.1| Arabidopsis thaliana At5g66920/MUD21_18 mRNA... 146 1e-033
emb|BX831134.1|CNS09ZEQ Arabidopsis thaliana Full-length cD... 146 1e-033
ref|NM_126091.2| Arabidopsis thaliana SKS17; copper ion bin... 146 1e-033
gb|AV537452.1|AV537452 AV537452 Arabidopsis thaliana roots ... 143 1e-032
gb|CW801527.1|CW801527 WiscDsLox493D11 Arabidopsis thaliana... 90 1e-032
gb|BT005910.1| Arabidopsis thaliana At1g55560 gene, complet... 142 2e-032
dbj|AK118598.1| Arabidopsis thaliana At1g55560 mRNA for unk... 142 2e-032
emb|AJ249211.1|ATH249211 Arabidopsis thaliana mRNA for BNH ... 142 2e-032
ref|NM_104432.2| Arabidopsis thaliana SKS14; copper ion bin... 142 2e-032
gb|W43071.1|W43071 22662 Lambda-PRL2 Arabidopsis thaliana c... 141 4e-032
emb|BX829416.1|CNS0A1XP Arabidopsis thaliana Full-length cD... 141 4e-032
ref|NM_102034.1| Arabidopsis thaliana SKS7; copper ion bind... 140 8e-032
gb|AV547447.1|AV547447 AV547447 Arabidopsis thaliana roots ... 139 1e-031
gb|AV539026.1|AV539026 AV539026 Arabidopsis thaliana roots ... 139 2e-031
gb|AY056409.1| Arabidopsis thaliana AT3g13400/MRP15_3 mRNA,... 139 2e-031
gb|AY072225.1| Arabidopsis thaliana putative pollen specifi... 139 2e-031
gb|AY096473.1| Arabidopsis thaliana putative pollen-specifi... 139 2e-031
ref|NM_112185.2| Arabidopsis thaliana SKS13; copper ion bin... 139 2e-031
gb|AV546304.1|AV546304 AV546304 Arabidopsis thaliana roots ... 138 4e-031
gb|AF367325.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA,... 136 1e-030
gb|AY133602.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA,... 136 1e-030
ref|NM_104433.2| Arabidopsis thaliana SKS12; copper ion bin... 136 1e-030
gb|AI998955.1|AI998955 701547724 A. thaliana, Columbia Col-... 135 2e-030
gb|BT003958.1| Arabidopsis thaliana clone RAFL15-11-H21 (R2... 135 2e-030
ref|NM_112184.2| Arabidopsis thaliana SKS11; copper ion bin... 135 2e-030
gb|BT005058.1| Arabidopsis thaliana clone U20780 putative p... 135 2e-030
gb|AV540166.1|AV540166 AV540166 Arabidopsis thaliana roots ... 133 7e-030
gb|AI994449.1|AI994449 701498347 A. thaliana, Ohio State cl... 126 1e-029
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 90 2e-029
gb|AC008046.4|AC008046 Arabidopsis thaliana chromosome I BA... 64 2e-029
gb|AC022456.5|AC022456 Arabidopsis thaliana chromosome 1 BA... 64 2e-029
dbj|AB062093.1| Arabidopsis thaliana DNA, chromosome 1 cent... 64 2e-029
emb|AX059475.1| Sequence 208 from Patent WO0055325 64 2e-029
emb|AX059467.1| Sequence 200 from Patent WO0055325 64 2e-029
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 66 6e-029
gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis tha... 66 6e-029
emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome... 66 6e-029
gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis tha... 64 1e-028
emb|BX820822.1|CNS0A83H Arabidopsis thaliana Full-length cD... 128 3e-028
ref|NM_127927.2| Arabidopsis thaliana SKS16; copper ion bin... 128 3e-028
ref|NM_119879.2| Arabidopsis thaliana SKS15; copper ion bin... 123 4e-028
gb|AI995603.1|AI995603 701675059 A. thaliana, Columbia Col-... 127 6e-028
emb|AL082092.1|CNS00NM6 Arabidopsis thaliana genome survey ... 79 8e-028
gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis tha... 66 1e-027
gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis tha... 66 1e-027
gb|AQ964231.1|AQ964231 LERGU67TR LERG Arabidopsis thaliana ... 66 1e-027
gb|AQ964230.1|AQ964230 LERGU67TF LERG Arabidopsis thaliana ... 66 1e-027
gb|AV558425.1|AV558425 AV558425 Arabidopsis thaliana green ... 126 1e-027
gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14,... 90 1e-027
gb|AI999238.1|AI999238 701555127 A. thaliana, Columbia Col-... 91 2e-027
gb|AA042225.1|AA042225 24546 CD4-13 Arabidopsis thaliana cD... 124 4e-027
emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosom... 60 5e-027
emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome ... 60 5e-027
gb|AI994271.1|AI994271 701502007 A. thaliana, Ohio State cl... 123 1e-026
emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome ... 96 5e-026
gb|T21473.1|T21473 3481 Lambda-PRL2 Arabidopsis thaliana cD... 121 5e-026
gb|AQ967962.1|AQ967962 LERIW71TR LERG Arabidopsis thaliana ... 66 6e-026
emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosom... 96 9e-026
gb|AI996542.1|AI996542 701667381 A. thaliana, Columbia Col-... 119 1e-025
gb|BE038597.1|BE038597 AB01F09 AB Arabidopsis thaliana cDNA... 96 2e-024
dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosom... 90 6e-024
gb|CB263805.1|CB263805 08-E8879-008-014-O02-pBl2 MPIZ-ADIS-... 106 6e-024
gb|BZ358506.1|BZ358506 SALK_132882.50.60.x Arabidopsis thal... 85 2e-023
gb|CD530123.1|CD530123 39L4 Arabidopsis Leaf Senescence Lib... 111 4e-023
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 111 5e-023
gb|CD533976.1|CD533976 34M4 Arabidopsis Leaf Senescence Lib... 109 1e-022
gb|AQ967961.1|AQ967961 LERIW71TF LERG Arabidopsis thaliana ... 66 2e-022
gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis tha... 62 7e-022
gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8... 62 1e-021
gb|AV542451.1|AV542451 AV542451 Arabidopsis thaliana roots ... 87 3e-021
gb|AV548867.1|AV548867 AV548867 Arabidopsis thaliana roots ... 105 3e-021
gb|AI992516.1|AI992516 701558085 A. thaliana, Ohio State cl... 73 8e-021
gb|CL511496.1|CL511496 SAIL_849_C12.v1 SAIL Collection Arab... 62 1e-020
>ref|NM_117312.2| Arabidopsis thaliana SKU5; copper ion binding AT4G12420 (SKU5) mRNA,
complete cds
Length = 1919
Score = 263 bits (568), Expect(2) = 3e-074
Identities = 94/139 (67%), Positives = 119/139 (85%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD KDVY LDFP P+ GP + TS+IN TY+ F+E+V QNND+ +Q+YH
Sbjct: 1332 PSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYH 1511
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+ GYAF+VVGMDYGEWTENSRGTYNKWDG++R T QV+PGAW+A+++SLD+PG WN+RTE
Sbjct: 1512 MSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTE 1691
Query: 695 NLDTWYLGQETYIRVVDPN 639
NLD+WYLGQETY+RVV+P+
Sbjct: 1692 NLDSWYLGQETYVRVVNPD 1748
Score = 150 bits (323), Expect(2) = 4e-037
Identities = 80/138 (57%), Positives = 92/138 (66%)
Frame = +1 / -2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G TTL *VS PRYH SRFSV FQ PGLS+D A HAPG T*+V+R PSHLL VP LF
Sbjct: 1744 GLTTLT*VSCPRYHESRFSVLRFQAPGLSNDINIADHAPGYT*IVERAIPSHLLYVPLLF 1565
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVHSP*SIPTT+ A P M *+ + SLF* T S V L+ +V GP G++GKSS
Sbjct: 1564 SVHSP*SIPTTKKA*PLM**LCILVSLF*RTTSMNPR*VPLIIEVATLAGPVKGLLGKSS 1385
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+ TS SA+L GV G
Sbjct: 1384 LYTSLTLSLSASLIGVEG 1331
Score = 39.1 bits (79), Expect(2) = 3e-074
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -2 / +3
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQKPHGSRSSA 531
N TE PDN+LYCG L QK QK S S +
Sbjct: 1755 NKTEFGHPDNVLYCGALSKLQKPQKVSSSASKS 1853
Score = 27.2 bits (53), Expect(2) = 4e-037
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1 / -2
Query: 556 F*AFCLSLRRPQ*SMLSGATISVTL 630
F FC LR PQ* LSG SV L
Sbjct: 1828 FCGFCSLLRAPQ*RTLSGCPNSVLL 1754
>gb|AF439406.1| Arabidopsis thaliana multi-copper oxidase-related protein (SKU5)
mRNA, complete cds
Length = 1764
Score = 263 bits (568), Expect(2) = 3e-074
Identities = 94/139 (67%), Positives = 119/139 (85%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD KDVY LDFP P+ GP + TS+IN TY+ F+E+V QNND+ +Q+YH
Sbjct: 1177 PSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYH 1356
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+ GYAF+VVGMDYGEWTENSRGTYNKWDG++R T QV+PGAW+A+++SLD+PG WN+RTE
Sbjct: 1357 MSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTE 1536
Query: 695 NLDTWYLGQETYIRVVDPN 639
NLD+WYLGQETY+RVV+P+
Sbjct: 1537 NLDSWYLGQETYVRVVNPD 1593
Score = 150 bits (323), Expect(2) = 4e-037
Identities = 80/138 (57%), Positives = 92/138 (66%)
Frame = +1 / -2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G TTL *VS PRYH SRFSV FQ PGLS+D A HAPG T*+V+R PSHLL VP LF
Sbjct: 1589 GLTTLT*VSCPRYHESRFSVLRFQAPGLSNDINIADHAPGYT*IVERAIPSHLLYVPLLF 1410
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVHSP*SIPTT+ A P M *+ + SLF* T S V L+ +V GP G++GKSS
Sbjct: 1409 SVHSP*SIPTTKKA*PLM**LCILVSLF*RTTSMNPR*VPLIIEVATLAGPVKGLLGKSS 1230
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+ TS SA+L GV G
Sbjct: 1229 LYTSLTLSLSASLIGVEG 1176
Score = 39.1 bits (79), Expect(2) = 3e-074
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -2 / +1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQKPHGSRSSA 531
N TE PDN+LYCG L QK QK S S +
Sbjct: 1600 NKTEFGHPDNVLYCGALSKLQKPQKVSSSASKS 1698
Score = 27.2 bits (53), Expect(2) = 4e-037
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1 / -2
Query: 556 F*AFCLSLRRPQ*SMLSGATISVTL 630
F FC LR PQ* LSG SV L
Sbjct: 1673 FCGFCSLLRAPQ*RTLSGCPNSVLL 1599
>emb|AX506931.1| Sequence 1626 from Patent WO0216655
Length = 1764
Score = 263 bits (568), Expect(2) = 3e-074
Identities = 94/139 (67%), Positives = 119/139 (85%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD KDVY LDFP P+ GP + TS+IN TY+ F+E+V QNND+ +Q+YH
Sbjct: 1177 PSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYH 1356
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+ GYAF+VVGMDYGEWTENSRGTYNKWDG++R T QV+PGAW+A+++SLD+PG WN+RTE
Sbjct: 1357 MSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTE 1536
Query: 695 NLDTWYLGQETYIRVVDPN 639
NLD+WYLGQETY+RVV+P+
Sbjct: 1537 NLDSWYLGQETYVRVVNPD 1593
Score = 150 bits (323), Expect(2) = 4e-037
Identities = 80/138 (57%), Positives = 92/138 (66%)
Frame = +1 / -2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G TTL *VS PRYH SRFSV FQ PGLS+D A HAPG T*+V+R PSHLL VP LF
Sbjct: 1589 GLTTLT*VSCPRYHESRFSVLRFQAPGLSNDINIADHAPGYT*IVERAIPSHLLYVPLLF 1410
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVHSP*SIPTT+ A P M *+ + SLF* T S V L+ +V GP G++GKSS
Sbjct: 1409 SVHSP*SIPTTKKA*PLM**LCILVSLF*RTTSMNPR*VPLIIEVATLAGPVKGLLGKSS 1230
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+ TS SA+L GV G
Sbjct: 1229 LYTSLTLSLSASLIGVEG 1176
Score = 39.1 bits (79), Expect(2) = 3e-074
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -2 / +1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQKPHGSRSSA 531
N TE PDN+LYCG L QK QK S S +
Sbjct: 1600 NKTEFGHPDNVLYCGALSKLQKPQKVSSSASKS 1698
Score = 27.2 bits (53), Expect(2) = 4e-037
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1 / -2
Query: 556 F*AFCLSLRRPQ*SMLSGATISVTL 630
F FC LR PQ* LSG SV L
Sbjct: 1673 FCGFCSLLRAPQ*RTLSGCPNSVLL 1599
>ref|NM_124220.1| Arabidopsis thaliana SKS3; copper ion binding AT5G48450 (SKS3) mRNA,
complete cds
Length = 1653
Score = 252 bits (544), Expect = 2e-065
Identities = 98/165 (59%), Positives = 125/165 (75%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTY 879
PP TPL+LA Y+ VY LDFP P++ P + TSVIN T+K F+EI+FQN+D+TV++Y
Sbjct: 1156 PPATPLKLAQQYNISGVYKLDFPKRPMNRHPRVDTSVINGTFKGFVEIIFQNSDTTVKSY 1335
Query: 878 HIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRT 699
H+DGYAF+VVGMD+G WTENSR TYNK D V+R TTQVFPGAWTAV++SLD+ G WN+R
Sbjct: 1336 HLDGYAFFVVGMDFGLWTENSRSTYNKGDAVARSTTQVFPGAWTAVLVSLDNAGMWNLRI 1515
Query: 698 ENLDTWYLGQETYIRVVDPNGGYNVTEMVAPDNMLYCGLLKDKQK 564
+NL +WYLGQE Y+ VV+P + +E P N +YCG L QK
Sbjct: 1516 DNLASWYLGQELYLSVVNPEIDIDSSENSVPKNSIYCGRLSPLQK 1650
Score = 150 bits (323), Expect = 5e-035
Identities = 78/140 (55%), Positives = 92/140 (65%)
Frame = +1 / -2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G TTL S PRYH +R S+R F P LS ++ TAVHAPGNT VV R T S LL V LF
Sbjct: 1571 GLTTLKYSSWPRYHEARLSIRRFHMPALSKETKTAVHAPGNTCVVDRATASPLLYVLLLF 1392
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVH P SIPTT+NA PS W*+ TV SLF*N IS L V MT+V G IG+ GKS+
Sbjct: 1391 SVHRPKSIPTTKNA*PSKW*LLTVVSLF*NMISTNPLNVPFMTEVSTLGCLFIGLFGKSN 1212
Query: 1003 V*TSFLSYRSANLRGVSGGE 1062
+ T + Y A+ RGV+GG+
Sbjct: 1211 LYTPEMLYC*ASFRGVAGGK 1152
>gb|AY074379.1| Arabidopsis thaliana putative Pollen-specific protein precursor
(At4g25240) mRNA, complete cds
Length = 2173
Score = 221 bits (478), Expect(2) = 8e-062
Identities = 77/138 (55%), Positives = 108/138 (78%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD K Y LDFP P + P + S+IN+TYK F+++VFQNND+ +Q++H
Sbjct: 1323 PSTPVRLADRNKVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFH 1502
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+DGY+F+VVGMD+G W+E+ +G+YN WD +SR T +V+PG WTAV++SLD+ G WN+R E
Sbjct: 1503 VDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVE 1682
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD WYLG+ETY+R+ +P
Sbjct: 1683 NLDRWYLGEETYMRITNP 1736
Score = 122 bits (262), Expect(2) = 8e-029
Identities = 68/138 (49%), Positives = 80/138 (57%)
Frame = +1 / -1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G +*VS PRYH+SRFS R FQ P LS + TAV PG T +V E S LL P L
Sbjct: 1735 GFVIRI*VSSPRYHLSRFSTRMFQTPTLSREISTAVQPPGYTSIVLLEMASQLLYEPFLS 1556
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
S P SIPTT+N PS W +W + SLF T K LYV L+ D+ G G+ GKSS
Sbjct: 1555 SDQIPKSIPTTKNE*PSTWKLWILVSLFWKTTCIKPLYVALIIDLSKRRGLLKGLSGKSS 1376
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+* F RSA+L GV G
Sbjct: 1375 L*APFTLLRSASLTGVLG 1322
Score = 38.6 bits (78), Expect(2) = 8e-062
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 623 TEMVAPDNMLYCGLLKDKQKAQ 558
TEM PDN+LYCG LK+ QK Q
Sbjct: 1752 TEMDPPDNVLYCGALKNLQKEQ 1817
Score = 27.2 bits (53), Expect(2) = 8e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / -1
Query: 562 AFCLSLRRPQ*SMLSGATISV 624
+FC LR PQ LSG +ISV
Sbjct: 1813 SFCKFLRAPQYRTLSGGSISV 1751
>ref|NM_118656.3| Arabidopsis thaliana SKS1 (SKU5 SIMILAR 1); copper ion binding
AT4G25240 (SKS1) mRNA, complete cds
Length = 2157
Score = 221 bits (478), Expect(2) = 8e-062
Identities = 77/138 (55%), Positives = 108/138 (78%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD K Y LDFP P + P + S+IN+TYK F+++VFQNND+ +Q++H
Sbjct: 1323 PSTPVRLADRNKVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFH 1502
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+DGY+F+VVGMD+G W+E+ +G+YN WD +SR T +V+PG WTAV++SLD+ G WN+R E
Sbjct: 1503 VDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVE 1682
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD WYLG+ETY+R+ +P
Sbjct: 1683 NLDRWYLGEETYMRITNP 1736
Score = 122 bits (262), Expect(2) = 8e-029
Identities = 68/138 (49%), Positives = 80/138 (57%)
Frame = +1 / -3
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G +*VS PRYH+SRFS R FQ P LS + TAV PG T +V E S LL P L
Sbjct: 1735 GFVIRI*VSSPRYHLSRFSTRMFQTPTLSREISTAVQPPGYTSIVLLEMASQLLYEPFLS 1556
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
S P SIPTT+N PS W +W + SLF T K LYV L+ D+ G G+ GKSS
Sbjct: 1555 SDQIPKSIPTTKNE*PSTWKLWILVSLFWKTTCIKPLYVALIIDLSKRRGLLKGLSGKSS 1376
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+* F RSA+L GV G
Sbjct: 1375 L*APFTLLRSASLTGVLG 1322
Score = 38.6 bits (78), Expect(2) = 8e-062
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 623 TEMVAPDNMLYCGLLKDKQKAQ 558
TEM PDN+LYCG LK+ QK Q
Sbjct: 1752 TEMDPPDNVLYCGALKNLQKEQ 1817
Score = 27.2 bits (53), Expect(2) = 8e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / -3
Query: 562 AFCLSLRRPQ*SMLSGATISV 624
+FC LR PQ LSG +ISV
Sbjct: 1813 SFCKFLRAPQYRTLSGGSISV 1751
>gb|AY091230.1| Arabidopsis thaliana putative pollen-specific protein precursor
(At4g25240) mRNA, complete cds
Length = 1801
Score = 221 bits (478), Expect(2) = 8e-062
Identities = 77/138 (55%), Positives = 108/138 (78%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD K Y LDFP P + P + S+IN+TYK F+++VFQNND+ +Q++H
Sbjct: 1186 PSTPVRLADRNKVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFH 1365
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+DGY+F+VVGMD+G W+E+ +G+YN WD +SR T +V+PG WTAV++SLD+ G WN+R E
Sbjct: 1366 VDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVE 1545
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD WYLG+ETY+R+ +P
Sbjct: 1546 NLDRWYLGEETYMRITNP 1599
Score = 122 bits (262), Expect(2) = 8e-029
Identities = 68/138 (49%), Positives = 80/138 (57%)
Frame = +1 / -3
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G +*VS PRYH+SRFS R FQ P LS + TAV PG T +V E S LL P L
Sbjct: 1598 GFVIRI*VSSPRYHLSRFSTRMFQTPTLSREISTAVQPPGYTSIVLLEMASQLLYEPFLS 1419
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
S P SIPTT+N PS W +W + SLF T K LYV L+ D+ G G+ GKSS
Sbjct: 1418 SDQIPKSIPTTKNE*PSTWKLWILVSLFWKTTCIKPLYVALIIDLSKRRGLLKGLSGKSS 1239
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+* F RSA+L GV G
Sbjct: 1238 L*APFTLLRSASLTGVLG 1185
Score = 38.6 bits (78), Expect(2) = 8e-062
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQKAQ 558
TEM PDN+LYCG LK+ QK Q
Sbjct: 1615 TEMDPPDNVLYCGALKNLQKEQ 1680
Score = 27.2 bits (53), Expect(2) = 8e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / -3
Query: 562 AFCLSLRRPQ*SMLSGATISV 624
+FC LR PQ LSG +ISV
Sbjct: 1676 SFCKFLRAPQYRTLSGGSISV 1614
>emb|AX507345.1| Sequence 2040 from Patent WO0216655
Length = 1686
Score = 221 bits (478), Expect(2) = 3e-061
Identities = 77/138 (55%), Positives = 108/138 (78%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD K Y LDFP P + P + S+IN+TYK F+++VFQNND+ +Q++H
Sbjct: 1186 PSTPVRLADRNKVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFH 1365
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+DGY+F+VVGMD+G W+E+ +G+YN WD +SR T +V+PG WTAV++SLD+ G WN+R E
Sbjct: 1366 VDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVE 1545
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD WYLG+ETY+R+ +P
Sbjct: 1546 NLDRWYLGEETYMRITNP 1599
Score = 122 bits (262), Expect(2) = 1e-028
Identities = 68/138 (49%), Positives = 80/138 (57%)
Frame = +1 / -2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G +*VS PRYH+SRFS R FQ P LS + TAV PG T +V E S LL P L
Sbjct: 1598 GFVIRI*VSSPRYHLSRFSTRMFQTPTLSREISTAVQPPGYTSIVLLEMASQLLYEPFLS 1419
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
S P SIPTT+N PS W +W + SLF T K LYV L+ D+ G G+ GKSS
Sbjct: 1418 SDQIPKSIPTTKNE*PSTWKLWILVSLFWKTTCIKPLYVALIIDLSKRRGLLKGLSGKSS 1239
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+* F RSA+L GV G
Sbjct: 1238 L*APFTLLRSASLTGVLG 1185
Score = 36.8 bits (74), Expect(2) = 3e-061
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TEM PDN+LYCG LK+ QK
Sbjct: 1615 TEMDPPDNVLYCGALKNLQK 1674
Score = 26.7 bits (52), Expect(2) = 1e-028
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / -2
Query: 565 FCLSLRRPQ*SMLSGATISV 624
FC LR PQ LSG +ISV
Sbjct: 1673 FCKFLRAPQYRTLSGGSISV 1614
>gb|BT004129.1| Arabidopsis thaliana clone RAFL15-06-D22 (R20700) unknown protein
(At5g51480) mRNA, complete cds
Length = 2279
Score = 193 bits (415), Expect(3) = 6e-058
Identities = 64/109 (58%), Positives = 92/109 (84%)
Frame = -2 / +1
Query: 968 PVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDG 789
P + +S+IN+TYK F++++FQNND+ +Q++HIDGYAF+VV MD+G W+E+ +YN WD
Sbjct: 1462 PRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDA 1641
Query: 788 VSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+R T +V+PGAWTAV++SLD+ G WN+R ENLD WYLGQETY+R+++P
Sbjct: 1642 VARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINP 1788
Score = 107 bits (228), Expect(2) = 2e-023
Identities = 56/100 (56%), Positives = 63/100 (63%)
Frame = +1 / -1
Query: 658 M*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLFSVHSP 837
M VS PRYH+SRFS R FQ P LS + TAVHAPG T V R T S LL* L S H P
Sbjct: 1772 MYVSWPRYHLSRFSTRIFQTPTLSREISTAVHAPG*TSTVLRATASQLL*ELFLSSDHIP 1593
Query: 838 *SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDV 957
SI TT NAYPS+W +W + SLF K LYV LM ++
Sbjct: 1592 KSIATT*NAYPSIWKLWILVSLFWKITCIKPLYVALMIEL 1473
Score = 38.6 bits (78), Expect(3) = 6e-058
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPID 975
P TP+RLAD + K Y LDFP P+D
Sbjct: 1372 PSTPMRLADDHKVKGDYMLDFPDRPLD 1452
Score = 34.5 bits (69), Expect(3) = 6e-058
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQKAQKPHGSRSSASAAKL 516
TEM P+N++YCG L+ QK Q + S + +L
Sbjct: 1804 TEMDPPENVMYCGALQAMQKEQHHSSATKSMTNGQL 1911
Score = 24.4 bits (47), Expect(2) = 2e-023
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / -1
Query: 562 AFCLSLRRPQ*SMLSGATISV 624
+FC++ R PQ SG +ISV
Sbjct: 1865 SFCMA*RAPQYITFSGGSISV 1803
>ref|NM_124527.3| Arabidopsis thaliana copper ion binding AT5G51480 mRNA, complete cds
Length = 2263
Score = 193 bits (415), Expect(3) = 6e-058
Identities = 64/109 (58%), Positives = 92/109 (84%)
Frame = -2 / +1
Query: 968 PVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDG 789
P + +S+IN+TYK F++++FQNND+ +Q++HIDGYAF+VV MD+G W+E+ +YN WD
Sbjct: 1462 PRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDA 1641
Query: 788 VSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+R T +V+PGAWTAV++SLD+ G WN+R ENLD WYLGQETY+R+++P
Sbjct: 1642 VARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINP 1788
Score = 107 bits (228), Expect(2) = 2e-023
Identities = 56/100 (56%), Positives = 63/100 (63%)
Frame = +1 / -3
Query: 658 M*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLFSVHSP 837
M VS PRYH+SRFS R FQ P LS + TAVHAPG T V R T S LL* L S H P
Sbjct: 1772 MYVSWPRYHLSRFSTRIFQTPTLSREISTAVHAPG*TSTVLRATASQLL*ELFLSSDHIP 1593
Query: 838 *SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDV 957
SI TT NAYPS+W +W + SLF K LYV LM ++
Sbjct: 1592 KSIATT*NAYPSIWKLWILVSLFWKITCIKPLYVALMIEL 1473
Score = 38.6 bits (78), Expect(3) = 6e-058
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPID 975
P TP+RLAD + K Y LDFP P+D
Sbjct: 1372 PSTPMRLADDHKVKGDYMLDFPDRPLD 1452
Score = 34.5 bits (69), Expect(3) = 6e-058
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQKAQKPHGSRSSASAAKL 516
TEM P+N++YCG L+ QK Q + S + +L
Sbjct: 1804 TEMDPPENVMYCGALQAMQKEQHHSSATKSMTNGQL 1911
Score = 24.4 bits (47), Expect(2) = 2e-023
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / -3
Query: 562 AFCLSLRRPQ*SMLSGATISV 624
+FC++ R PQ SG +ISV
Sbjct: 1865 SFCMA*RAPQYITFSGGSISV 1803
>gb|BT004990.1| Arabidopsis thaliana clone U20700 unknown protein (At5g51480) mRNA,
complete cds
Length = 1810
Score = 193 bits (415), Expect(3) = 6e-058
Identities = 64/109 (58%), Positives = 92/109 (84%)
Frame = -2 / +1
Query: 968 PVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDG 789
P + +S+IN+TYK F++++FQNND+ +Q++HIDGYAF+VV MD+G W+E+ +YN WD
Sbjct: 1273 PRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDA 1452
Query: 788 VSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+R T +V+PGAWTAV++SLD+ G WN+R ENLD WYLGQETY+R+++P
Sbjct: 1453 VARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINP 1599
Score = 107 bits (228), Expect(2) = 2e-023
Identities = 56/100 (56%), Positives = 63/100 (63%)
Frame = +1 / -3
Query: 658 M*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLFSVHSP 837
M VS PRYH+SRFS R FQ P LS + TAVHAPG T V R T S LL* L S H P
Sbjct: 1583 MYVSWPRYHLSRFSTRIFQTPTLSREISTAVHAPG*TSTVLRATASQLL*ELFLSSDHIP 1404
Query: 838 *SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDV 957
SI TT NAYPS+W +W + SLF K LYV LM ++
Sbjct: 1403 KSIATT*NAYPSIWKLWILVSLFWKITCIKPLYVALMIEL 1284
Score = 38.6 bits (78), Expect(3) = 6e-058
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPID 975
P TP+RLAD + K Y LDFP P+D
Sbjct: 1183 PSTPMRLADDHKVKGDYMLDFPDRPLD 1263
Score = 34.5 bits (69), Expect(3) = 6e-058
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQKAQKPHGSRSSASAAKL 516
TEM P+N++YCG L+ QK Q + S + +L
Sbjct: 1615 TEMDPPENVMYCGALQAMQKEQHHSSATKSMTNGQL 1722
Score = 24.4 bits (47), Expect(2) = 2e-023
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / -3
Query: 562 AFCLSLRRPQ*SMLSGATISV 624
+FC++ R PQ SG +ISV
Sbjct: 1676 SFCMA*RAPQYITFSGGSISV 1614
>emb|BX830464.1|CNS0A1MM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB83ZF06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2205
Score = 193 bits (415), Expect(3) = 2e-057
Identities = 64/109 (58%), Positives = 92/109 (84%)
Frame = -2 / +3
Query: 968 PVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDG 789
P + +S+IN+TYK F++++FQNND+ +Q++HIDGYAF+VV MD+G W+E+ +YN WD
Sbjct: 1449 PRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDA 1628
Query: 788 VSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+R T +V+PGAWTAV++SLD+ G WN+R ENLD WYLGQETY+R+++P
Sbjct: 1629 VARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINP 1775
Score = 107 bits (228), Expect(2) = 2e-023
Identities = 56/100 (56%), Positives = 63/100 (63%)
Frame = +1 / -3
Query: 658 M*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLFSVHSP 837
M VS PRYH+SRFS R FQ P LS + TAVHAPG T V R T S LL* L S H P
Sbjct: 1759 MYVSWPRYHLSRFSTRIFQTPTLSREISTAVHAPG*TSTVLRATASQLL*ELFLSSDHIP 1580
Query: 838 *SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDV 957
SI TT NAYPS+W +W + SLF K LYV LM ++
Sbjct: 1579 KSIATT*NAYPSIWKLWILVSLFWKITCIKPLYVALMIEL 1460
Score = 38.6 bits (78), Expect(3) = 2e-057
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPID 975
P TP+RLAD + K Y LDFP P+D
Sbjct: 1359 PSTPMRLADDHKVKGDYMLDFPDRPLD 1439
Score = 33.1 bits (66), Expect(3) = 2e-057
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2 / +3
Query: 623 TEMVAPDNMLYCGLLKDKQKAQ 558
TEM P+N++YCG L+ QK Q
Sbjct: 1791 TEMDPPENVMYCGALQAMQKEQ 1856
Score = 24.4 bits (47), Expect(2) = 2e-023
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / -3
Query: 562 AFCLSLRRPQ*SMLSGATISV 624
+FC++ R PQ SG +ISV
Sbjct: 1852 SFCMA*RAPQYITFSGGSISV 1790
>dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJE7
Length = 74298
Score = 109 bits (233), Expect(3) = 1e-056
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = -2 / -1
Query: 1058 PPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTY 879
PP TPL+LA Y+ VY LDFP P++ P + TSVIN T+K F+EI+FQN+D+TV++Y
Sbjct: 29388 PPATPLKLAQQYNISGVYKLDFPKRPMNRHPRVDTSVINGTFKGFVEIIFQNSDTTVKSY 29209
Query: 878 HIDGYAFWVVG 846
H+DGYAF+VVG
Sbjct: 29208 HLDGYAFFVVG 29176
Score = 100 bits (212), Expect(3) = 1e-056
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = -2 / -1
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNGGYNVTEMVAPDNMLY 591
QVFPGAWTAV++SLD+ G WN+R +NL +WYLGQE Y+ VV+P + +E P N +Y
Sbjct: 28923 QVFPGAWTAVLVSLDNAGMWNLRIDNLASWYLGQELYLSVVNPEIDIDSSENSVPKNSIY 28744
Query: 590 CGLLKDKQK 564
CG L QK
Sbjct: 28743 CGRLSPLQK 28717
Score = 71.2 bits (149), Expect(3) = 3e-026
Identities = 37/72 (51%), Positives = 47/72 (65%)
Frame = +1 / +2
Query: 847 PTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSSV*TSFLSY 1026
PTT+NA PS W*+ TV SLF*N IS L V MT+V G IG+ GKS++ T + Y
Sbjct: 29177 PTTKNA*PSKW*LLTVVSLF*NMISTNPLNVPFMTEVSTLGCLFIGLFGKSNLYTPEMLY 29356
Query: 1027 RSANLRGVSGGE 1062
A+ RGV+GG+
Sbjct: 29357 C*ASFRGVAGGK 29392
Score = 58.3 bits (121), Expect(3) = 3e-026
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +1 / +2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT 768
G TTL S PRYH +R S+R F P LS ++ TAVHAPGNT
Sbjct: 28796 GLTTLKYSSWPRYHEARLSIRRFHMPALSKETKTAVHAPGNT 28921
Score = 52.4 bits (108), Expect(3) = 1e-056
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -2 / -3
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQV 765
MD+G WTENSR TYNK D V+R TTQV
Sbjct: 29074 MDFGLWTENSRSTYNKGDAVARSTTQV 28994
Score = 29.5 bits (58), Expect(3) = 3e-026
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +1 / +3
Query: 766 T*VVQRETPSHLL*VPRLFSVHSP*SI 846
T VV R T S LL V LFSVH P SI
Sbjct: 28995 TCVVDRATASPLLYVLLLFSVHRPKSI 29075
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 111 bits (236), Expect(4) = 8e-054
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = -2 / -1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD KDVY LDFP P+ GP + TS+IN TY+ F+E+V QNND+ +Q+YH
Sbjct: 3263515 PSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYH 3263336
Query: 875 IDGYAFWVVG 846
+ GYAF+VVG
Sbjct: 3263335 MSGYAFFVVG 3263306
Score = 100 bits (212), Expect(4) = 1e-052
Identities = 37/70 (52%), Positives = 52/70 (74%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD K Y LDFP P + P + S+IN+TYK F+++VFQNND+ +Q++H
Sbjct: 8845503 PSTPVRLADRNKVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFH 8845682
Query: 875 IDGYAFWVVG 846
+DGY+F+VVG
Sbjct: 8845683 VDGYSFFVVG 8845712
Score = 96.4 bits (204), Expect(4) = 8e-054
Identities = 32/45 (71%), Positives = 44/45 (97%)
Frame = -2 / -3
Query: 773 TQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
+QV+PGAW+A+++SLD+PG WN+RTENLD+WYLGQETY+RVV+P+
Sbjct: 3263063 SQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPD 3262929
Score = 96.4 bits (204), Expect(2) = 6e-024
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = -2 / +1
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQE 666
MD G+WT SR YN D VSR T QV+P AWTA+ ++LD+ G WN+R+EN YLGQ+
Sbjct: 7578940 MDGGQWTPGSRAKYNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQ 7579119
Query: 665 TYIRVVDPNGGY 630
Y+RV + Y
Sbjct: 7579120 FYLRVYTSSTSY 7579155
Score = 83.1 bits (175), Expect(4) = 1e-052
Identities = 27/42 (64%), Positives = 36/42 (85%)
Frame = -2 / +1
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+PG WTAV++SLD+ G WN+R ENLD WYLG+ETY+R+ +P
Sbjct: 8845954 VYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNP 8846079
Score = 65.7 bits (137), Expect(3) = 5e-026
Identities = 22/39 (56%), Positives = 33/39 (84%)
Frame = -2 / +3
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVG 846
+ TSV+ + +++FLEI+FQN + VQ+YH+DGY+FWVVG
Sbjct: 13897380 METSVMGAHHRDFLEIIFQNREKIVQSYHLDGYSFWVVG 13897496
Score = 61.1 bits (127), Expect(3) = 4e-024
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT 768
G TTL *VS PRYH SRFSV FQ PGLS+D A HAPG T
Sbjct: 3262933 GLTTLT*VSCPRYHESRFSVLRFQAPGLSNDINIADHAPGYT 3263058
Score = 60.2 bits (125), Expect(4) = 4e-027
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = -2 / -2
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVG 846
T+V+ + + FLEI+FQN + VQ+YH+DGY FWVVG
Sbjct: 9875244 TAVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVG 9875134
Score = 57.4 bits (119), Expect(3) = 5e-026
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = -2 / +2
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+P +WTAV ++LD+ G WN+R+E YLGQ+ Y+RV P
Sbjct: 13897754 VYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSP 13897879
Score = 57.4 bits (119), Expect(4) = 4e-027
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -2 / -2
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
V+P +WTAV ++LD+ G WN+R++ YLGQ+ Y+RV PN
Sbjct: 9874881 VYPKSWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVHSPN 9874753
Score = 54.2 bits (112), Expect(2) = 6e-024
Identities = 17/39 (43%), Positives = 34/39 (87%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVG 846
+++SV+ + ++ F+E+VFQN +++VQ++H+ GY+F+VVG
Sbjct: 7578676 LQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVG 7578792
Score = 51.0 bits (105), Expect(3) = 4e-024
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1 / +3
Query: 847 PTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSSV*TSFLSY 1026
PTT+ A P M *+ + SLF* T S V L+ +V GP G++GKSS+ TS
Sbjct: 3263307 PTTKKA*PLM**LCILVSLF*RTTSMNPR*VPLIIEVATLAGPVKGLLGKSSLYTSLTLS 3263486
Query: 1027 RSANLRGVSG 1056
SA+L GV G
Sbjct: 3263487 LSASLIGVEG 3263516
Score = 46.4 bits (95), Expect(4) = 1e-052
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2 / +1
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQV 765
MD+G W+E+ +G+YN WD +SR T +V
Sbjct: 8845804 MDFGIWSEDKKGSYNNWDAISRSTIEV 8845884
Score = 39.6 bits (80), Expect(3) = 4e-024
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 765 HLSRATRNTIPLVVSPTAILSPLTIVHSYNPECISIN 875
+L+ TR+TIP VV + +L PL+I+H+ + + +S N
Sbjct: 3263145 YLNSGTRDTIPFVVCSSTVLCPLSIIHTTSNQNVSRN 3263255
Score = 36.8 bits (74), Expect(4) = 1e-052
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TEM PDN+LYCG LK+ QK
Sbjct: 8846095 TEMDPPDNVLYCGALKNLQK 8846154
Score = 35.0 bits (70), Expect(3) = 5e-026
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2 / +1
Query: 842 DYGEWTENSRGTYNKWDGVSRCTTQV 765
D G W++ SR YN D +SR TTQV
Sbjct: 13897600 DRGTWSKASRREYNLRDAISRSTTQV 13897677
Score = 32.7 bits (65), Expect(4) = 8e-054
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 629 NVTEMVAPDNMLYCGLLKDKQK 564
N TE PDN+LYCG L QK
Sbjct: 3262922 NKTEFGHPDNVLYCGALSKLQK 3262857
Score = 31.8 bits (63), Expect(4) = 4e-027
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / -2
Query: 836 GEWTENSRGTYNKWDGVSRCTTQV 765
G W+ SR YN D +SR TTQV
Sbjct: 9875043 GIWSRASRREYNLKDAISRSTTQV 9874972
Score = 29.9 bits (59), Expect(4) = 8e-054
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / -2
Query: 843 GLW*VD*E*PWDLQQVGWCFSLHDSG 766
GLW VD E ++QQ+GW + H SG
Sbjct: 3263223 GLWRVDREQ*RNIQQMGWYRAFHYSG 3263146
Score = 29.5 bits (58), Expect(4) = 4e-027
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 1058 PPDTPLRLADLYDKKDVY 1005
P DTPL+LAD + KDV+
Sbjct: 9875352 PSDTPLKLADHFKIKDVF 9875299
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34
Length = 196107
Score = 111 bits (236), Expect(4) = 9e-054
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = -2 / -1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD KDVY LDFP P+ GP + TS+IN TY+ F+E+V QNND+ +Q+YH
Sbjct: 22905 PSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYH 22726
Query: 875 IDGYAFWVVG 846
+ GYAF+VVG
Sbjct: 22725 MSGYAFFVVG 22696
Score = 96.4 bits (204), Expect(4) = 9e-054
Identities = 32/45 (71%), Positives = 44/45 (97%)
Frame = -2 / -3
Query: 773 TQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
+QV+PGAW+A+++SLD+PG WN+RTENLD+WYLGQETY+RVV+P+
Sbjct: 22453 SQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPD 22319
Score = 61.1 bits (127), Expect(4) = 8e-027
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +3
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT 768
G TTL *VS PRYH SRFSV FQ PGLS+D A HAPG T
Sbjct: 22323 GLTTLT*VSCPRYHESRFSVLRFQAPGLSNDINIADHAPGYT 22448
Score = 51.0 bits (105), Expect(4) = 8e-027
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1 / +2
Query: 847 PTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSSV*TSFLSY 1026
PTT+ A P M *+ + SLF* T S V L+ +V GP G++GKSS+ TS
Sbjct: 22697 PTTKKA*PLM**LCILVSLF*RTTSMNPR*VPLIIEVATLAGPVKGLLGKSSLYTSLTLS 22876
Query: 1027 RSANLRGVSG 1056
SA+L GV G
Sbjct: 22877 LSASLIGVEG 22906
Score = 39.6 bits (80), Expect(4) = 8e-027
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3 / +2
Query: 765 HLSRATRNTIPLVVSPTAILSPLTIVHSYNPECISIN 875
+L+ TR+TIP VV + +L PL+I+H+ + + +S N
Sbjct: 22535 YLNSGTRDTIPFVVCSSTVLCPLSIIHTTSNQNVSRN 22645
Score = 32.7 bits (65), Expect(4) = 9e-054
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 629 NVTEMVAPDNMLYCGLLKDKQK 564
N TE PDN+LYCG L QK
Sbjct: 22312 NKTEFGHPDNVLYCGALSKLQK 22247
Score = 29.9 bits (59), Expect(4) = 9e-054
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / -2
Query: 843 GLW*VD*E*PWDLQQVGWCFSLHDSG 766
GLW VD E ++QQ+GW + H SG
Sbjct: 22613 GLWRVDREQ*RNIQQMGWYRAFHYSG 22536
Score = 26.3 bits (51), Expect(4) = 8e-027
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1 / +3
Query: 565 FCLSLRRPQ*SMLSGATISVTL 630
FC LR PQ* LSG SV L
Sbjct: 22248 FCSLLRAPQ*RTLSGCPNSVLL 22313
>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project)
Length = 137519
Score = 111 bits (236), Expect(4) = 9e-054
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = -2 / -2
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD KDVY LDFP P+ GP + TS+IN TY+ F+E+V QNND+ +Q+YH
Sbjct: 18373 PSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYH 18194
Query: 875 IDGYAFWVVG 846
+ GYAF+VVG
Sbjct: 18193 MSGYAFFVVG 18164
Score = 96.4 bits (204), Expect(4) = 9e-054
Identities = 32/45 (71%), Positives = 44/45 (97%)
Frame = -2 / -1
Query: 773 TQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
+QV+PGAW+A+++SLD+PG WN+RTENLD+WYLGQETY+RVV+P+
Sbjct: 17921 SQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPD 17787
Score = 61.1 bits (127), Expect(4) = 9e-027
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT 768
G TTL *VS PRYH SRFSV FQ PGLS+D A HAPG T
Sbjct: 17791 GLTTLT*VSCPRYHESRFSVLRFQAPGLSNDINIADHAPGYT 17916
Score = 51.0 bits (105), Expect(4) = 9e-027
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1 / +3
Query: 847 PTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSSV*TSFLSY 1026
PTT+ A P M *+ + SLF* T S V L+ +V GP G++GKSS+ TS
Sbjct: 18165 PTTKKA*PLM**LCILVSLF*RTTSMNPR*VPLIIEVATLAGPVKGLLGKSSLYTSLTLS 18344
Query: 1027 RSANLRGVSG 1056
SA+L GV G
Sbjct: 18345 LSASLIGVEG 18374
Score = 39.6 bits (80), Expect(4) = 9e-027
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 765 HLSRATRNTIPLVVSPTAILSPLTIVHSYNPECISIN 875
+L+ TR+TIP VV + +L PL+I+H+ + + +S N
Sbjct: 18003 YLNSGTRDTIPFVVCSSTVLCPLSIIHTTSNQNVSRN 18113
Score = 32.7 bits (65), Expect(4) = 9e-054
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -1
Query: 629 NVTEMVAPDNMLYCGLLKDKQK 564
N TE PDN+LYCG L QK
Sbjct: 17780 NKTEFGHPDNVLYCGALSKLQK 17715
Score = 29.9 bits (59), Expect(4) = 9e-054
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / -3
Query: 843 GLW*VD*E*PWDLQQVGWCFSLHDSG 766
GLW VD E ++QQ+GW + H SG
Sbjct: 18081 GLWRVDREQ*RNIQQMGWYRAFHYSG 18004
Score = 26.3 bits (51), Expect(4) = 9e-027
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1 / +1
Query: 565 FCLSLRRPQ*SMLSGATISVTL 630
FC LR PQ* LSG SV L
Sbjct: 17716 FCSLLRAPQ*RTLSGCPNSVLL 17781
>emb|AL080318.1|ATT4C9 Arabidopsis thaliana DNA chromosome 4, BAC clone T4C9 (ESSA project)
Length = 85356
Score = 111 bits (236), Expect(4) = 9e-054
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = -2 / -2
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD KDVY LDFP P+ GP + TS+IN TY+ F+E+V QNND+ +Q+YH
Sbjct: 84875 PSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYH 84696
Query: 875 IDGYAFWVVG 846
+ GYAF+VVG
Sbjct: 84695 MSGYAFFVVG 84666
Score = 96.4 bits (204), Expect(4) = 9e-054
Identities = 32/45 (71%), Positives = 44/45 (97%)
Frame = -2 / -1
Query: 773 TQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
+QV+PGAW+A+++SLD+PG WN+RTENLD+WYLGQETY+RVV+P+
Sbjct: 84423 SQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPD 84289
Score = 61.1 bits (127), Expect(4) = 9e-027
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT 768
G TTL *VS PRYH SRFSV FQ PGLS+D A HAPG T
Sbjct: 84293 GLTTLT*VSCPRYHESRFSVLRFQAPGLSNDINIADHAPGYT 84418
Score = 51.0 bits (105), Expect(4) = 9e-027
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1 / +1
Query: 847 PTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSSV*TSFLSY 1026
PTT+ A P M *+ + SLF* T S V L+ +V GP G++GKSS+ TS
Sbjct: 84667 PTTKKA*PLM**LCILVSLF*RTTSMNPR*VPLIIEVATLAGPVKGLLGKSSLYTSLTLS 84846
Query: 1027 RSANLRGVSG 1056
SA+L GV G
Sbjct: 84847 LSASLIGVEG 84876
Score = 39.6 bits (80), Expect(4) = 9e-027
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3 / +1
Query: 765 HLSRATRNTIPLVVSPTAILSPLTIVHSYNPECISIN 875
+L+ TR+TIP VV + +L PL+I+H+ + + +S N
Sbjct: 84505 YLNSGTRDTIPFVVCSSTVLCPLSIIHTTSNQNVSRN 84615
Score = 32.7 bits (65), Expect(4) = 9e-054
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -1
Query: 629 NVTEMVAPDNMLYCGLLKDKQK 564
N TE PDN+LYCG L QK
Sbjct: 84282 NKTEFGHPDNVLYCGALSKLQK 84217
Score = 29.9 bits (59), Expect(4) = 9e-054
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / -3
Query: 843 GLW*VD*E*PWDLQQVGWCFSLHDSG 766
GLW VD E ++QQ+GW + H SG
Sbjct: 84583 GLWRVDREQ*RNIQQMGWYRAFHYSG 84506
Score = 26.3 bits (51), Expect(4) = 9e-027
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1 / +2
Query: 565 FCLSLRRPQ*SMLSGATISVTL 630
FC LR PQ* LSG SV L
Sbjct: 84218 FCSLLRAPQ*RTLSGCPNSVLL 84283
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63
Length = 198777
Score = 100 bits (212), Expect(4) = 1e-052
Identities = 37/70 (52%), Positives = 52/70 (74%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD K Y LDFP P + P + S+IN+TYK F+++VFQNND+ +Q++H
Sbjct: 14967 PSTPVRLADRNKVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFH 15146
Query: 875 IDGYAFWVVG 846
+DGY+F+VVG
Sbjct: 15147 VDGYSFFVVG 15176
Score = 83.1 bits (175), Expect(4) = 1e-052
Identities = 27/42 (64%), Positives = 36/42 (85%)
Frame = -2 / +1
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+PG WTAV++SLD+ G WN+R ENLD WYLG+ETY+R+ +P
Sbjct: 15418 VYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNP 15543
Score = 46.4 bits (95), Expect(4) = 1e-052
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2 / +1
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQV 765
MD+G W+E+ +G+YN WD +SR T +V
Sbjct: 15268 MDFGIWSEDKKGSYNNWDAISRSTIEV 15348
Score = 36.8 bits (74), Expect(4) = 1e-052
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TEM PDN+LYCG LK+ QK
Sbjct: 15559 TEMDPPDNVLYCGALKNLQK 15618
>emb|AL035396.1|ATF24A6 Arabidopsis thaliana DNA chromosome 4, BAC clone F24A6 (ESSAII
project)
Length = 92073
Score = 100 bits (212), Expect(4) = 1e-052
Identities = 37/70 (52%), Positives = 52/70 (74%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD K Y LDFP P + P + S+IN+TYK F+++VFQNND+ +Q++H
Sbjct: 65155 PSTPVRLADRNKVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFH 65334
Query: 875 IDGYAFWVVG 846
+DGY+F+VVG
Sbjct: 65335 VDGYSFFVVG 65364
Score = 83.1 bits (175), Expect(4) = 1e-052
Identities = 27/42 (64%), Positives = 36/42 (85%)
Frame = -2 / +2
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+PG WTAV++SLD+ G WN+R ENLD WYLG+ETY+R+ +P
Sbjct: 65606 VYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNP 65731
Score = 46.4 bits (95), Expect(4) = 1e-052
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2 / +2
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQV 765
MD+G W+E+ +G+YN WD +SR T +V
Sbjct: 65456 MDFGIWSEDKKGSYNNWDAISRSTIEV 65536
Score = 36.8 bits (74), Expect(4) = 1e-052
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TEM PDN+LYCG LK+ QK
Sbjct: 65747 TEMDPPDNVLYCGALKNLQK 65806
>dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K17N15
Length = 81293
Score = 90.0 bits (190), Expect(5) = 3e-051
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = -2 / +3
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
QV+PGAWTAV++SLD+ G WN+R ENLD WYLGQETY+R+++P
Sbjct: 11331 QVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINP 11459
Score = 71.2 bits (149), Expect(5) = 3e-051
Identities = 23/40 (57%), Positives = 36/40 (90%)
Frame = -2 / +3
Query: 968 PVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVV 849
P + +S+IN+TYK F++++FQNND+ +Q++HIDGYAF+VV
Sbjct: 10938 PRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVV 11057
Score = 48.3 bits (99), Expect(5) = 3e-051
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / +1
Query: 866 YAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQV 765
+ FW MD+G W+E+ +YN WD V+R T +V
Sbjct: 11131 FKFWYSRMDFGIWSEDRNSSYNNWDAVARSTVEV 11232
Score = 38.6 bits (78), Expect(5) = 3e-051
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPID 975
P TP+RLAD + K Y LDFP P+D
Sbjct: 10848 PSTPMRLADDHKVKGDYMLDFPDRPLD 10928
Score = 31.3 bits (62), Expect(5) = 3e-051
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2 / +3
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TEM P+N++YCG L+ QK
Sbjct: 11475 TEMDPPENVMYCGALQAMQK 11534
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 109 bits (233), Expect(2) = 3e-041
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = -2 / -2
Query: 1058 PPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTY 879
PP TPL+LA Y+ VY LDFP P++ P + TSVIN T+K F+EI+FQN+D+TV++Y
Sbjct: 17724096 PPATPLKLAQQYNISGVYKLDFPKRPMNRHPRVDTSVINGTFKGFVEIIFQNSDTTVKSY 17723917
Query: 878 HIDGYAFWVVG 846
H+DGYAF+VVG
Sbjct: 17723916 HLDGYAFFVVG 17723884
Score = 100 bits (212), Expect(2) = 3e-041
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = -2 / -2
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNGGYNVTEMVAPDNMLY 591
QVFPGAWTAV++SLD+ G WN+R +NL +WYLGQE Y+ VV+P + +E P N +Y
Sbjct: 17723631 QVFPGAWTAVLVSLDNAGMWNLRIDNLASWYLGQELYLSVVNPEIDIDSSENSVPKNSIY 17723452
Query: 590 CGLLKDKQK 564
CG L QK
Sbjct: 17723451 CGRLSPLQK 17723425
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 109 bits (233), Expect(2) = 3e-041
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = -2 / -3
Query: 1058 PPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTY 879
PP TPL+LA Y+ VY LDFP P++ P + TSVIN T+K F+EI+FQN+D+TV++Y
Sbjct: 19651195 PPATPLKLAQQYNISGVYKLDFPKRPMNRHPRVDTSVINGTFKGFVEIIFQNSDTTVKSY 19651016
Query: 878 HIDGYAFWVVG 846
H+DGYAF+VVG
Sbjct: 19651015 HLDGYAFFVVG 19650983
Score = 100 bits (212), Expect(2) = 3e-041
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = -2 / -3
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNGGYNVTEMVAPDNMLY 591
QVFPGAWTAV++SLD+ G WN+R +NL +WYLGQE Y+ VV+P + +E P N +Y
Sbjct: 19650730 QVFPGAWTAVLVSLDNAGMWNLRIDNLASWYLGQELYLSVVNPEIDIDSSENSVPKNSIY 19650551
Query: 590 CGLLKDKQK 564
CG L QK
Sbjct: 19650550 CGRLSPLQK 19650524
>gb|AV439870.1|AV439870 AV439870 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD19d12_f 3', mRNA
sequence
Length = 585
Score = 153 bits (329), Expect(2) = 2e-040
Identities = 53/70 (75%), Positives = 66/70 (94%)
Frame = -2 / -1
Query: 848 GMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQ 669
GMDYGEWTENSRGTYNKWDG++R T QV+PGAW+A+++SL +PG WN+RTENLD+WYLGQ
Sbjct: 585 GMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLVNPGAWNLRTENLDSWYLGQ 406
Query: 668 ETYIRVVDPN 639
ETY+RVV+P+
Sbjct: 405 ETYVRVVNPD 376
Score = 101 bits (215), Expect(2) = 9e-022
Identities = 48/68 (70%), Positives = 52/68 (76%)
Frame = +1 / +2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G TTL *VS PRYH SRFSV FQ PGL++D A HAPG T*+V+R PSHLL VP LF
Sbjct: 380 GLTTLT*VSCPRYHESRFSVLRFQAPGLTNDINIADHAPGYT*IVERAIPSHLLYVPLLF 559
Query: 823 SVHSP*SI 846
SVHSP*SI
Sbjct: 560 SVHSP*SI 583
Score = 35.4 bits (71), Expect(2) = 2e-040
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2 / -1
Query: 623 TEMVAPDNMLYCGLLKDKQKAQKPHGSRSSA 531
TE PDN+LYCG L QK K S S +
Sbjct: 363 TEFGRPDNVLYCGALSKLQKPHKVSSSASKS 271
Score = 24.9 bits (48), Expect(2) = 9e-022
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1 / +2
Query: 559 *AFCLSLRRPQ*SMLSGATISV 624
* FC LR PQ* LSG SV
Sbjct: 299 *GFCSLLRAPQ*RTLSGRPNSV 364
>ref|NM_102033.1| Arabidopsis thaliana SKS8; copper ion binding AT1G21850 (SKS8) mRNA,
complete cds
Length = 1656
Score = 151 bits (325), Expect(2) = 4e-037
Identities = 60/118 (50%), Positives = 83/118 (70%)
Frame = -2 / +1
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P G TSV+ + YK F+EIVF+N + VQT+H+DGY+F+VVGM+ G+W+ SR
Sbjct: 1189 PDQPTHGAIYPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFFVVGMELGKWSAASR 1368
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
YN D VSRCT QV+P +WTA+ +SLD+ G WN+R+E + YLGQ+ Y+RV P+
Sbjct: 1369 KVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPS 1542
Score = 26.3 bits (51), Expect(2) = 4e-037
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVY 1005
P DTPL+LAD + VY
Sbjct: 1120 PTDTPLKLADYFKIAGVY 1173
>gb|AY072215.1| Arabidopsis thaliana putative pectinesterase (At4g38420) mRNA,
complete cds
Length = 1906
Score = 149 bits (321), Expect(2) = 7e-037
Identities = 56/107 (52%), Positives = 79/107 (73%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+ TSV+ + +++FLEI+FQN + VQ+YH+DGY+FWVVG D G W++ SR YN D +S
Sbjct: 1312 METSVMGAHHRDFLEIIFQNREKIVQSYHLDGYSFWVVGTDRGTWSKASRREYNLRDAIS 1491
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
R TTQV+P +WTAV ++LD+ G WN+R+E YLGQ+ Y+RV P
Sbjct: 1492 RSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSP 1632
Score = 27.2 bits (53), Expect(2) = 7e-037
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTL 999
P DTPL+LAD + K V+ +
Sbjct: 1210 PGDTPLKLADYFKIKGVFKM 1269
>ref|NM_120004.3| Arabidopsis thaliana SKS9; copper ion binding AT4G38420 (SKS9) mRNA,
complete cds
Length = 1899
Score = 149 bits (321), Expect(2) = 7e-037
Identities = 56/107 (52%), Positives = 79/107 (73%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+ TSV+ + +++FLEI+FQN + VQ+YH+DGY+FWVVG D G W++ SR YN D +S
Sbjct: 1312 METSVMGAHHRDFLEIIFQNREKIVQSYHLDGYSFWVVGTDRGTWSKASRREYNLRDAIS 1491
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
R TTQV+P +WTAV ++LD+ G WN+R+E YLGQ+ Y+RV P
Sbjct: 1492 RSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSP 1632
Score = 27.2 bits (53), Expect(2) = 7e-037
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTL 999
P DTPL+LAD + K V+ +
Sbjct: 1210 PGDTPLKLADYFKIKGVFKM 1269
>gb|AY096593.1| Arabidopsis thaliana putative pectinesterase (At4g38420) mRNA,
complete cds
Length = 1681
Score = 149 bits (321), Expect(2) = 7e-037
Identities = 56/107 (52%), Positives = 79/107 (73%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+ TSV+ + +++FLEI+FQN + VQ+YH+DGY+FWVVG D G W++ SR YN D +S
Sbjct: 1246 METSVMGAHHRDFLEIIFQNREKIVQSYHLDGYSFWVVGTDRGTWSKASRREYNLRDAIS 1425
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
R TTQV+P +WTAV ++LD+ G WN+R+E YLGQ+ Y+RV P
Sbjct: 1426 RSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSP 1566
Score = 27.2 bits (53), Expect(2) = 7e-037
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTL 999
P DTPL+LAD + K V+ +
Sbjct: 1144 PGDTPLKLADYFKIKGVFKM 1203
>emb|AX507015.1| Sequence 1710 from Patent WO0216655
Length = 1647
Score = 149 bits (321), Expect(2) = 7e-037
Identities = 56/107 (52%), Positives = 79/107 (73%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+ TSV+ + +++FLEI+FQN + VQ+YH+DGY+FWVVG D G W++ SR YN D +S
Sbjct: 1243 METSVMGAHHRDFLEIIFQNREKIVQSYHLDGYSFWVVGTDRGTWSKASRREYNLRDAIS 1422
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
R TTQV+P +WTAV ++LD+ G WN+R+E YLGQ+ Y+RV P
Sbjct: 1423 RSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSP 1563
Score = 27.2 bits (53), Expect(2) = 7e-037
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTL 999
P DTPL+LAD + K V+ +
Sbjct: 1141 PGDTPLKLADYFKIKGVFKM 1200
>gb|BX836294.1|BX836294 BX836294 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH72ZB11 3PRIM,
mRNA sequence
Length = 814
Score = 156 bits (336), Expect = 9e-037
Identities = 56/115 (48%), Positives = 84/115 (73%)
Frame = -2 / -1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR Y
Sbjct: 583 PTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEY 404
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
N D V+RCT QV+P +WTA++++LD+ G WN+R+E YLGQ+ Y+RV P+
Sbjct: 403 NLRDAVNRCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPS 239
>gb|AV549603.1|AV549603 AV549603 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09h05R 5', mRNA sequence
Length = 539
Score = 156 bits (336), Expect = 9e-037
Identities = 56/115 (48%), Positives = 84/115 (73%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR Y
Sbjct: 154 PTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEY 333
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
N D V+RCT QV+P +WTA++++LD+ G WN+R+E YLGQ+ Y+RV P+
Sbjct: 334 NLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPS 498
>gb|CK118224.1|CK118224 217n04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N04217
5-PRIME, mRNA sequence
Length = 558
Score = 156 bits (336), Expect = 9e-037
Identities = 56/115 (48%), Positives = 84/115 (73%)
Frame = -2 / +3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR Y
Sbjct: 21 PTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEY 200
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
N D V+RCT QV+P +WTA++++LD+ G WN+R+E YLGQ+ Y+RV P+
Sbjct: 201 NLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPS 365
>gb|AY057492.1| Arabidopsis thaliana At1g76160/T23E18_10 mRNA, complete cds
Length = 1934
Score = 156 bits (336), Expect = 9e-037
Identities = 56/115 (48%), Positives = 84/115 (73%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR Y
Sbjct: 1264 PTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEY 1443
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
N D V+RCT QV+P +WTA++++LD+ G WN+R+E YLGQ+ Y+RV P+
Sbjct: 1444 NLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPS 1608
>ref|NM_106265.2| Arabidopsis thaliana SKS5; copper ion binding AT1G76160 (SKS5) mRNA,
complete cds
Length = 1987
Score = 156 bits (336), Expect = 9e-037
Identities = 56/115 (48%), Positives = 84/115 (73%)
Frame = -2 / +3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR Y
Sbjct: 1290 PTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEY 1469
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
N D V+RCT QV+P +WTA++++LD+ G WN+R+E YLGQ+ Y+RV P+
Sbjct: 1470 NLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPS 1634
>gb|AY136404.1| Arabidopsis thaliana pectinesterase, putative (At1g76160) mRNA,
complete cds
Length = 1914
Score = 155 bits (334), Expect = 2e-036
Identities = 56/115 (48%), Positives = 83/115 (72%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR Y
Sbjct: 1246 PTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEY 1425
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
N D V+RCT QV+P +WTA++++LD+ G WN+R E YLGQ+ Y+RV P+
Sbjct: 1426 NLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRPEFWARQYLGQQLYLRVYTPS 1590
>gb|BT000227.1| Arabidopsis thaliana pectinesterase, putative (At1g76160) mRNA,
complete cds
Length = 1662
Score = 155 bits (334), Expect = 2e-036
Identities = 56/115 (48%), Positives = 83/115 (72%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR Y
Sbjct: 1198 PTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEY 1377
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
N D V+RCT QV+P +WTA++++LD+ G WN+R E YLGQ+ Y+RV P+
Sbjct: 1378 NLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRPEFWARQYLGQQLYLRVYTPS 1542
>gb|AY059814.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
Length = 1963
Score = 146 bits (314), Expect(2) = 3e-036
Identities = 56/111 (50%), Positives = 77/111 (69%)
Frame = -2 / +3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVF+N + VQ+YH++GY+FWVVGMD G+W SR Y
Sbjct: 1260 PTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWETGSRNGY 1439
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D VSR T QV+P +WTA+ ++LD+ G WN+R+E YLGQ+ Y+RV
Sbjct: 1440 NLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRV 1592
Score = 28.1 bits (55), Expect(2) = 3e-036
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2 / +3
Query: 1058 PPDTPLRLADLYDKKDVYTLD 996
P DTPL+LAD + VY ++
Sbjct: 1182 PADTPLKLADFFKISGVYKIN 1244
>ref|NM_103408.1| Arabidopsis thaliana SKS6; pectinesterase AT1G41830 (SKS6) mRNA,
complete cds
Length = 1963
Score = 146 bits (314), Expect(2) = 3e-036
Identities = 56/111 (50%), Positives = 77/111 (69%)
Frame = -2 / +3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVF+N + VQ+YH++GY+FWVVGMD G+W SR Y
Sbjct: 1260 PTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGY 1439
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D VSR T QV+P +WTA+ ++LD+ G WN+R+E YLGQ+ Y+RV
Sbjct: 1440 NLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRV 1592
Score = 28.1 bits (55), Expect(2) = 3e-036
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2 / +3
Query: 1058 PPDTPLRLADLYDKKDVYTLD 996
P DTPL+LAD + VY ++
Sbjct: 1182 PADTPLKLADFFKISGVYKIN 1244
>gb|AY128725.1| Arabidopsis thaliana unknown protein (At1g41830) mRNA, complete cds
Length = 1666
Score = 146 bits (314), Expect(2) = 3e-036
Identities = 56/111 (50%), Positives = 77/111 (69%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVF+N + VQ+YH++GY+FWVVGMD G+W SR Y
Sbjct: 1201 PTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWETGSRNGY 1380
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D VSR T QV+P +WTA+ ++LD+ G WN+R+E YLGQ+ Y+RV
Sbjct: 1381 NLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRV 1533
Score = 28.1 bits (55), Expect(2) = 3e-036
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTLD 996
P DTPL+LAD + VY ++
Sbjct: 1123 PADTPLKLADFFKISGVYKIN 1185
>emb|CQ805442.1| Sequence 1853 from Patent WO2004035798
Length = 1629
Score = 146 bits (314), Expect(2) = 3e-036
Identities = 56/111 (50%), Positives = 77/111 (69%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVF+N + VQ+YH++GY+FWVVGMD G+W SR Y
Sbjct: 1201 PTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGY 1380
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D VSR T QV+P +WTA+ ++LD+ G WN+R+E YLGQ+ Y+RV
Sbjct: 1381 NLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRV 1533
Score = 28.1 bits (55), Expect(2) = 3e-036
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTLD 996
P DTPL+LAD + VY ++
Sbjct: 1123 PADTPLKLADFFKISGVYKIN 1185
>gb|CK117520.1|CK117520 218e09.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011E09218
5-PRIME, mRNA sequence
Length = 770
Score = 146 bits (314), Expect(2) = 3e-036
Identities = 56/111 (50%), Positives = 77/111 (69%)
Frame = -2 / +3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVF+N + VQ+YH++GY+FWVVGMD G+W SR Y
Sbjct: 354 PTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGY 533
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D VSR T QV+P +WTA+ ++LD+ G WN+R+E YLGQ+ Y+RV
Sbjct: 534 NLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRV 686
Score = 28.1 bits (55), Expect(2) = 3e-036
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2 / +3
Query: 1058 PPDTPLRLADLYDKKDVYTLD 996
P DTPL+LAD + VY ++
Sbjct: 276 PADTPLKLADFFKISGVYKIN 338
>gb|CB261040.1|CB261040 39-E9570-012-004-M09-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769M094Q 5-PRIME, mRNA sequence
Length = 702
Score = 146 bits (314), Expect(2) = 3e-036
Identities = 56/111 (50%), Positives = 77/111 (69%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVF+N + VQ+YH++GY+FWVVGMD G+W SR Y
Sbjct: 130 PTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGY 309
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D VSR T QV+P +WTA+ ++LD+ G WN+R+E YLGQ+ Y+RV
Sbjct: 310 NLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRV 462
Score = 28.1 bits (55), Expect(2) = 3e-036
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTLD 996
P DTPL+LAD + VY ++
Sbjct: 52 PADTPLKLADFFKISGVYKIN 114
>gb|AV537619.1|AV537619 AV537619 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09h05F 3', mRNA sequence
Length = 602
Score = 154 bits (331), Expect = 4e-036
Identities = 54/106 (50%), Positives = 81/106 (76%)
Frame = -2 / -1
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRC 777
TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR YN D V+RC
Sbjct: 590 TSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARC 411
Query: 776 TTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
T QV+P +WTA++++LD+ G WN+R+E YLGQ+ Y+RV P+
Sbjct: 410 TVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPS 273
>gb|CK118777.1|CK118777 216b24.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B24216
5-PRIME, mRNA sequence
Length = 673
Score = 154 bits (331), Expect = 4e-036
Identities = 54/106 (50%), Positives = 81/106 (76%)
Frame = -2 / +3
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRC 777
TSV+ Y+ F+EI+F+N++ VQ++H+DGY+FWVVGMD G+W+ +SR YN D V+RC
Sbjct: 18 TSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARC 197
Query: 776 TTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
T QV+P +WTA++++LD+ G WN+R+E YLGQ+ Y+RV P+
Sbjct: 198 TVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPS 335
>ref|NM_118322.3| Arabidopsis thaliana SKS4; copper ion binding AT4G22010 (SKS4) mRNA,
complete cds
Length = 1983
Score = 147 bits (316), Expect(2) = 5e-036
Identities = 54/111 (48%), Positives = 82/111 (73%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+++SV+ + ++ F+E+VFQN +++VQ++H+ GY+F+VVGMD G+WT SR YN D VS
Sbjct: 1324 LQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVS 1503
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNGGY 630
R T QV+P AWTA+ ++LD+ G WN+R+EN YLGQ+ Y+RV + Y
Sbjct: 1504 RSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSY 1656
Score = 26.7 bits (52), Expect(2) = 5e-036
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTL 999
PDTPL+LAD + V+ L
Sbjct: 1225 PDTPLKLADYFKIPGVFNL 1281
>gb|AY081335.1| Arabidopsis thaliana pectinesterase-like protein (At4g22010) mRNA,
complete cds
Length = 1980
Score = 147 bits (316), Expect(2) = 5e-036
Identities = 54/111 (48%), Positives = 82/111 (73%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+++SV+ + ++ F+E+VFQN +++VQ++H+ GY+F+VVGMD G+WT SR YN D VS
Sbjct: 1324 LQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVS 1503
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNGGY 630
R T QV+P AWTA+ ++LD+ G WN+R+EN YLGQ+ Y+RV + Y
Sbjct: 1504 RSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSY 1656
Score = 26.7 bits (52), Expect(2) = 5e-036
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTL 999
PDTPL+LAD + V+ L
Sbjct: 1225 PDTPLKLADYFKIPGVFNL 1281
>emb|AX507059.1| Sequence 1754 from Patent WO0216655
Length = 1626
Score = 147 bits (316), Expect(2) = 5e-036
Identities = 54/111 (48%), Positives = 82/111 (73%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+++SV+ + ++ F+E+VFQN +++VQ++H+ GY+F+VVGMD G+WT SR YN D VS
Sbjct: 1219 LQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVS 1398
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNGGY 630
R T QV+P AWTA+ ++LD+ G WN+R+EN YLGQ+ Y+RV + Y
Sbjct: 1399 RSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSY 1551
Score = 26.7 bits (52), Expect(2) = 5e-036
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTL 999
PDTPL+LAD + V+ L
Sbjct: 1120 PDTPLKLADYFKIPGVFNL 1176
>gb|BT008899.1| Arabidopsis thaliana At4g22010 mRNA, complete cds
Length = 1626
Score = 147 bits (316), Expect(2) = 5e-036
Identities = 54/111 (48%), Positives = 82/111 (73%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+++SV+ + ++ F+E+VFQN +++VQ++H+ GY+F+VVGMD G+WT SR YN D VS
Sbjct: 1219 LQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVS 1398
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNGGY 630
R T QV+P AWTA+ ++LD+ G WN+R+EN YLGQ+ Y+RV + Y
Sbjct: 1399 RSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSY 1551
Score = 26.7 bits (52), Expect(2) = 5e-036
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTL 999
PDTPL+LAD + V+ L
Sbjct: 1120 PDTPLKLADYFKIPGVFNL 1176
>gb|AY088897.1| Arabidopsis thaliana clone 99023 mRNA, complete sequence
Length = 1956
Score = 153 bits (329), Expect = 8e-036
Identities = 56/115 (48%), Positives = 82/115 (71%)
Frame = -2 / +2
Query: 995 FPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENS 816
FP P + P + TSV++ YK+F+ IVFQN +++YHIDGY F+VVG +G W+E+
Sbjct: 1319 FPVYPSNKTPTLGTSVVDIHYKDFIHIVFQNPLFGLESYHIDGYNFFVVGYGFGAWSESK 1498
Query: 815 RGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
+ YN D VSR T QV+P +WTA+++++D+ G WNVR++ + WYLGQE Y+RV
Sbjct: 1499 KAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRV 1663
>emb|BX814551.1|CNS0ADPL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB7ZF11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1794
Score = 153 bits (329), Expect = 8e-036
Identities = 56/115 (48%), Positives = 82/115 (71%)
Frame = -2 / +3
Query: 995 FPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENS 816
FP P + P + TSV++ YK+F+ IVFQN +++YHIDGY F+VVG +G W+E+
Sbjct: 1299 FPVYPSNKTPTLGTSVVDIHYKDFIHIVFQNPLFGLESYHIDGYNFFVVGYGFGAWSESK 1478
Query: 815 RGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
+ YN D VSR T QV+P +WTA+++++D+ G WNVR++ + WYLGQE Y+RV
Sbjct: 1479 KAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRV 1643
>ref|NM_106229.1| Arabidopsis thaliana SKS18; copper ion binding / pectinesterase
AT1G75790 (SKS18) mRNA, complete cds
Length = 1955
Score = 153 bits (329), Expect = 8e-036
Identities = 56/115 (48%), Positives = 82/115 (71%)
Frame = -2 / +2
Query: 995 FPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENS 816
FP P + P + TSV++ YK+F+ IVFQN +++YHIDGY F+VVG +G W+E+
Sbjct: 1319 FPVYPSNKTPTLGTSVVDIHYKDFIHIVFQNPLFGLESYHIDGYNFFVVGYGFGAWSESK 1498
Query: 815 RGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
+ YN D VSR T QV+P +WTA+++++D+ G WNVR++ + WYLGQE Y+RV
Sbjct: 1499 KAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRV 1663
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,393,882,178
Number of Sequences: 1013581
Number of extensions: 36672855
Number of successful extensions: 195528
Number of sequences better than 1.0e-020: 154
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 72581027208
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)