TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2193041.2.1
(877 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB264110.1|CB264110 91-E014993-035-003-E23-T7R MPIZ-ADIS... 380 e-104
gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribos... 380 e-104
gb|AV825327.1|AV825327 AV825327 RAFL7 Arabidopsis thaliana ... 379 e-104
gb|AY056141.1| Arabidopsis thaliana putative 60S ribosomal ... 379 e-104
gb|BT000711.1| Arabidopsis thaliana clone RAFL09-17-C05 (R0... 379 e-104
ref|NM_122667.2| Arabidopsis thaliana structural constituen... 379 e-104
gb|AV822119.1|AV822119 AV822119 RAFL5 Arabidopsis thaliana ... 378 e-103
gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA... 378 e-103
ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROT... 378 e-103
gb|AY122996.1| Arabidopsis thaliana putative 60S ribosomal ... 377 e-103
emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cD... 374 e-102
gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA... 374 e-102
gb|CF652156.1|CF652156 37-L020525-066-003-J09-SP6P MPIZ-ADI... 372 e-101
gb|CF652057.1|CF652057 31-L020362-066-002-N08-SP6P MPIZ-ADI... 370 e-101
gb|CA781829.1|CA781829 051E12AF Infected Arabidopsis Leaf A... 369 e-100
emb|BX822675.1|CNS0A7MK Arabidopsis thaliana Full-length cD... 365 e-100
gb|BE038821.1|BE038821 AB07C09 AB Arabidopsis thaliana cDNA... 362 8e-099
gb|CB254873.1|CB254873 57-E018361-019-007-A16-T7R MPIZ-ADIS... 347 2e-094
gb|AV559994.1|AV559994 AV559994 Arabidopsis thaliana green ... 327 2e-088
gb|AV550190.1|AV550190 AV550190 Arabidopsis thaliana roots ... 324 3e-087
gb|AV782778.1|AV782778 AV782778 RAFL5 Arabidopsis thaliana ... 317 4e-085
gb|AV827922.1|AV827922 AV827922 RAFL9 Arabidopsis thaliana ... 234 8e-084
gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome II... 121 6e-081
gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from... 119 1e-080
gb|AV535094.1|AV535094 AV535094 Arabidopsis thaliana flower... 281 2e-074
gb|AW004212.1|AW004212 701549078 A. thaliana, Columbia Col-... 277 3e-073
emb|BX832577.1|CNS0A1WZ Arabidopsis thaliana Full-length cD... 269 8e-071
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 112 6e-070
gb|BP853538.1|BP853538 BP853538 RAFL21 Arabidopsis thaliana... 244 2e-063
gb|BP820622.1|BP820622 BP820622 RAFL19 Arabidopsis thaliana... 242 2e-062
gb|AV552450.1|AV552450 AV552450 Arabidopsis thaliana roots ... 212 4e-062
gb|BP813190.1|BP813190 BP813190 RAFL19 Arabidopsis thaliana... 232 5e-061
gb|AV552035.1|AV552035 AV552035 Arabidopsis thaliana roots ... 236 7e-061
gb|BP844795.1|BP844795 BP844795 RAFL21 Arabidopsis thaliana... 236 1e-060
emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cD... 235 2e-060
gb|AV542782.1|AV542782 AV542782 Arabidopsis thaliana roots ... 234 2e-060
gb|BP857535.1|BP857535 BP857535 RAFL21 Arabidopsis thaliana... 231 3e-059
gb|BP844305.1|BP844305 BP844305 RAFL21 Arabidopsis thaliana... 215 7e-059
ref|NM_130325.1| Arabidopsis thaliana structural constituen... 130 2e-058
gb|BP812879.1|BP812879 BP812879 RAFL19 Arabidopsis thaliana... 228 2e-058
gb|BP586227.1|BP586227 BP586227 RAFL15 Arabidopsis thaliana... 226 6e-058
gb|BP798427.1|BP798427 BP798427 RAFL14 Arabidopsis thaliana... 226 8e-058
gb|BP796897.1|BP796897 BP796897 RAFL14 Arabidopsis thaliana... 178 1e-057
gb|AV538046.1|AV538046 AV538046 Arabidopsis thaliana roots ... 225 1e-057
gb|BP814189.1|BP814189 BP814189 RAFL19 Arabidopsis thaliana... 225 2e-057
gb|BP864195.1|BP864195 BP864195 RAFL21 Arabidopsis thaliana... 224 3e-057
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 121 3e-056
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 121 3e-056
gb|AV543075.1|AV543075 AV543075 Arabidopsis thaliana roots ... 221 3e-056
gb|BP823019.1|BP823019 BP823019 RAFL19 Arabidopsis thaliana... 219 9e-056
gb|BP798204.1|BP798204 BP798204 RAFL14 Arabidopsis thaliana... 137 1e-055
gb|BP868224.1|BP868224 BP868224 RAFL21 Arabidopsis thaliana... 193 1e-055
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 119 4e-055
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 119 4e-055
gb|BP842649.1|BP842649 BP842649 RAFL21 Arabidopsis thaliana... 155 5e-055
gb|BP851600.1|BP851600 BP851600 RAFL21 Arabidopsis thaliana... 123 5e-055
gb|BP845763.1|BP845763 BP845763 RAFL21 Arabidopsis thaliana... 215 2e-054
gb|BP862150.1|BP862150 BP862150 RAFL21 Arabidopsis thaliana... 164 3e-054
gb|BP802761.1|BP802761 BP802761 RAFL14 Arabidopsis thaliana... 166 3e-054
gb|BP868414.1|BP868414 BP868414 RAFL21 Arabidopsis thaliana... 184 6e-054
gb|BP835680.1|BP835680 BP835680 RAFL19 Arabidopsis thaliana... 177 6e-054
gb|BP868924.1|BP868924 BP868924 RAFL21 Arabidopsis thaliana... 212 1e-053
gb|BP843276.1|BP843276 BP843276 RAFL21 Arabidopsis thaliana... 190 1e-053
gb|AW004263.1|AW004263 701669857 A. thaliana, Columbia Col-... 211 2e-053
gb|BP851830.1|BP851830 BP851830 RAFL21 Arabidopsis thaliana... 210 5e-053
gb|BP813557.1|BP813557 BP813557 RAFL19 Arabidopsis thaliana... 207 3e-052
gb|BP813523.1|BP813523 BP813523 RAFL19 Arabidopsis thaliana... 131 7e-052
gb|BP801137.1|BP801137 BP801137 RAFL14 Arabidopsis thaliana... 159 1e-051
gb|BP822627.1|BP822627 BP822627 RAFL19 Arabidopsis thaliana... 188 1e-051
gb|BP860180.1|BP860180 BP860180 RAFL21 Arabidopsis thaliana... 180 9e-051
gb|BP854674.1|BP854674 BP854674 RAFL21 Arabidopsis thaliana... 158 8e-050
gb|BP565250.1|BP565250 BP565250 RAFL14 Arabidopsis thaliana... 198 3e-049
gb|BP813743.1|BP813743 BP813743 RAFL19 Arabidopsis thaliana... 133 3e-049
gb|BP867531.1|BP867531 BP867531 RAFL21 Arabidopsis thaliana... 167 4e-049
gb|BP848813.1|BP848813 BP848813 RAFL21 Arabidopsis thaliana... 159 7e-049
gb|BP779131.1|BP779131 BP779131 RAFL7 Arabidopsis thaliana ... 196 1e-048
gb|BP821222.1|BP821222 BP821222 RAFL19 Arabidopsis thaliana... 188 1e-048
gb|BP800537.1|BP800537 BP800537 RAFL14 Arabidopsis thaliana... 179 2e-048
gb|BP802107.1|BP802107 BP802107 RAFL14 Arabidopsis thaliana... 194 2e-048
gb|BP796589.1|BP796589 BP796589 RAFL5 Arabidopsis thaliana ... 193 5e-048
gb|BP829227.1|BP829227 BP829227 RAFL19 Arabidopsis thaliana... 93 8e-048
gb|BP797186.1|BP797186 BP797186 RAFL14 Arabidopsis thaliana... 166 9e-048
gb|BP846504.1|BP846504 BP846504 RAFL21 Arabidopsis thaliana... 111 1e-047
gb|BP582516.1|BP582516 BP582516 RAFL14 Arabidopsis thaliana... 192 1e-047
gb|BP826238.1|BP826238 BP826238 RAFL19 Arabidopsis thaliana... 192 2e-047
gb|AV799915.1|AV799915 AV799915 RAFL9 Arabidopsis thaliana ... 191 2e-047
gb|BP854760.1|BP854760 BP854760 RAFL21 Arabidopsis thaliana... 137 3e-047
gb|CB185942.1|CB185942 EST01133 Arabidopsis virulent Pseudo... 116 3e-047
gb|BP855236.1|BP855236 BP855236 RAFL21 Arabidopsis thaliana... 153 6e-047
gb|BP816223.1|BP816223 BP816223 RAFL19 Arabidopsis thaliana... 181 1e-046
gb|BP842212.1|BP842212 BP842212 RAFL21 Arabidopsis thaliana... 150 1e-046
gb|T88582.1|T88582 12278 Lambda-PRL2 Arabidopsis thaliana c... 188 3e-046
gb|BP570489.1|BP570489 BP570489 RAFL14 Arabidopsis thaliana... 168 4e-046
gb|BP581119.1|BP581119 BP581119 RAFL14 Arabidopsis thaliana... 187 4e-046
gb|AV798876.1|AV798876 AV798876 RAFL9 Arabidopsis thaliana ... 186 8e-046
gb|BP582622.1|BP582622 BP582622 RAFL14 Arabidopsis thaliana... 186 8e-046
gb|BP569107.1|BP569107 BP569107 RAFL14 Arabidopsis thaliana... 115 1e-045
gb|BP830020.1|BP830020 BP830020 RAFL19 Arabidopsis thaliana... 127 1e-045
gb|BP809097.1|BP809097 BP809097 RAFL16 Arabidopsis thaliana... 127 1e-045
gb|BP846681.1|BP846681 BP846681 RAFL21 Arabidopsis thaliana... 137 2e-045
gb|BP819869.1|BP819869 BP819869 RAFL19 Arabidopsis thaliana... 105 2e-045
gb|AV785594.1|AV785594 AV785594 RAFL6 Arabidopsis thaliana ... 183 5e-045
gb|BP564039.1|BP564039 BP564039 RAFL14 Arabidopsis thaliana... 183 5e-045
gb|BP817978.1|BP817978 BP817978 RAFL19 Arabidopsis thaliana... 81 1e-044
gb|BP848292.1|BP848292 BP848292 RAFL21 Arabidopsis thaliana... 155 2e-044
gb|BP587066.1|BP587066 BP587066 RAFL15 Arabidopsis thaliana... 181 2e-044
gb|BP859852.1|BP859852 BP859852 RAFL21 Arabidopsis thaliana... 104 3e-044
gb|BP861583.1|BP861583 BP861583 RAFL21 Arabidopsis thaliana... 72 4e-044
gb|BP590170.1|BP590170 BP590170 RAFL15 Arabidopsis thaliana... 180 6e-044
gb|BP835483.1|BP835483 BP835483 RAFL19 Arabidopsis thaliana... 106 7e-044
gb|BP817272.1|BP817272 BP817272 RAFL19 Arabidopsis thaliana... 111 1e-043
gb|BP803026.1|BP803026 BP803026 RAFL14 Arabidopsis thaliana... 162 1e-043
gb|AV798678.1|AV798678 AV798678 RAFL9 Arabidopsis thaliana ... 179 1e-043
gb|BP643928.1|BP643928 BP643928 RAFL19 Arabidopsis thaliana... 171 3e-043
gb|BP574543.1|BP574543 BP574543 RAFL14 Arabidopsis thaliana... 177 4e-043
gb|BP665657.1|BP665657 BP665657 RAFL21 Arabidopsis thaliana... 177 4e-043
gb|BP589410.1|BP589410 BP589410 RAFL15 Arabidopsis thaliana... 177 6e-043
gb|BP572722.1|BP572722 BP572722 RAFL14 Arabidopsis thaliana... 121 1e-042
gb|BP596379.1|BP596379 BP596379 RAFL15 Arabidopsis thaliana... 175 2e-042
gb|BP573170.1|BP573170 BP573170 RAFL14 Arabidopsis thaliana... 175 2e-042
gb|BP858433.1|BP858433 BP858433 RAFL21 Arabidopsis thaliana... 109 2e-042
gb|BP794410.1|BP794410 BP794410 RAFL7 Arabidopsis thaliana ... 174 4e-042
gb|AA389792.1|AA389792 OS107 NaCl-treated Arabidopsis subtr... 173 6e-042
gb|BP588244.1|BP588244 BP588244 RAFL15 Arabidopsis thaliana... 173 8e-042
gb|BP794339.1|BP794339 BP794339 RAFL7 Arabidopsis thaliana ... 173 8e-042
gb|BP801000.1|BP801000 BP801000 RAFL14 Arabidopsis thaliana... 90 1e-041
gb|BP816617.1|BP816617 BP816617 RAFL19 Arabidopsis thaliana... 92 1e-041
gb|BP809195.1|BP809195 BP809195 RAFL16 Arabidopsis thaliana... 137 2e-041
gb|AV789092.1|AV789092 AV789092 RAFL6 Arabidopsis thaliana ... 171 3e-041
gb|AV811194.1|AV811194 AV811194 RAFL9 Arabidopsis thaliana ... 171 3e-041
gb|AV789045.1|AV789045 AV789045 RAFL6 Arabidopsis thaliana ... 171 4e-041
gb|BP563291.1|BP563291 BP563291 RAFL14 Arabidopsis thaliana... 171 4e-041
gb|BP618021.1|BP618021 BP618021 RAFL16 Arabidopsis thaliana... 171 4e-041
gb|BP644058.1|BP644058 BP644058 RAFL19 Arabidopsis thaliana... 171 4e-041
gb|BP825445.1|BP825445 BP825445 RAFL19 Arabidopsis thaliana... 112 7e-041
gb|BP630665.1|BP630665 BP630665 RAFL17 Arabidopsis thaliana... 168 2e-040
gb|BP792479.1|BP792479 BP792479 RAFL7 Arabidopsis thaliana ... 168 2e-040
gb|BP856964.1|BP856964 BP856964 RAFL21 Arabidopsis thaliana... 115 2e-040
gb|BP815153.1|BP815153 BP815153 RAFL19 Arabidopsis thaliana... 114 3e-040
gb|BP825082.1|BP825082 BP825082 RAFL19 Arabidopsis thaliana... 152 4e-040
gb|BP584798.1|BP584798 BP584798 RAFL14 Arabidopsis thaliana... 166 6e-040
gb|BP594504.1|BP594504 BP594504 RAFL15 Arabidopsis thaliana... 166 9e-040
gb|BP603650.1|BP603650 BP603650 RAFL16 Arabidopsis thaliana... 166 1e-039
gb|BP670478.1|BP670478 BP670478 RAFL21 Arabidopsis thaliana... 157 2e-039
gb|BP668226.1|BP668226 BP668226 RAFL21 Arabidopsis thaliana... 165 2e-039
gb|BP573575.1|BP573575 BP573575 RAFL14 Arabidopsis thaliana... 164 3e-039
gb|BP830636.1|BP830636 BP830636 RAFL19 Arabidopsis thaliana... 134 4e-039
gb|BP574755.1|BP574755 BP574755 RAFL14 Arabidopsis thaliana... 164 4e-039
gb|BP778148.1|BP778148 BP778148 RAFL7 Arabidopsis thaliana ... 164 4e-039
gb|BP648105.1|BP648105 BP648105 RAFL19 Arabidopsis thaliana... 162 1e-038
gb|BP816293.1|BP816293 BP816293 RAFL19 Arabidopsis thaliana... 92 1e-038
gb|BP567003.1|BP567003 BP567003 RAFL14 Arabidopsis thaliana... 161 3e-038
gb|BP631221.1|BP631221 BP631221 RAFL17 Arabidopsis thaliana... 161 3e-038
gb|T04593.1|T04593 640 Lambda-PRL2 Arabidopsis thaliana cDN... 160 4e-038
gb|BP663630.1|BP663630 BP663630 RAFL21 Arabidopsis thaliana... 160 4e-038
gb|BP643383.1|BP643383 BP643383 RAFL19 Arabidopsis thaliana... 107 5e-038
gb|T21082.1|T21082 3090 Lambda-PRL2 Arabidopsis thaliana cD... 160 8e-038
gb|BP571926.1|BP571926 BP571926 RAFL14 Arabidopsis thaliana... 159 1e-037
gb|BP626619.1|BP626619 BP626619 RAFL17 Arabidopsis thaliana... 159 1e-037
gb|CW846934.1|CW846934 GT13816.Ds5.01.29.2004.jx50.782 Arab... 95 1e-037
gb|AV803160.1|AV803160 AV803160 RAFL9 Arabidopsis thaliana ... 159 1e-037
gb|BP827616.1|BP827616 BP827616 RAFL19 Arabidopsis thaliana... 74 4e-037
gb|AV792990.1|AV792990 AV792990 RAFL7 Arabidopsis thaliana ... 157 5e-037
gb|AV812697.1|AV812697 AV812697 RAFL9 Arabidopsis thaliana ... 157 5e-037
gb|BP578804.1|BP578804 BP578804 RAFL14 Arabidopsis thaliana... 122 6e-037
gb|AV815515.1|AV815515 AV815515 RAFL9 Arabidopsis thaliana ... 132 8e-037
gb|BP852019.1|BP852019 BP852019 RAFL21 Arabidopsis thaliana... 100 8e-037
gb|BP576468.1|BP576468 BP576468 RAFL14 Arabidopsis thaliana... 155 2e-036
gb|BP638690.1|BP638690 BP638690 RAFL19 Arabidopsis thaliana... 155 2e-036
gb|BP783315.1|BP783315 BP783315 RAFL7 Arabidopsis thaliana ... 155 2e-036
gb|BP795490.1|BP795490 BP795490 RAFL7 Arabidopsis thaliana ... 155 2e-036
gb|BP822697.1|BP822697 BP822697 RAFL19 Arabidopsis thaliana... 104 4e-036
gb|BP571303.1|BP571303 BP571303 RAFL14 Arabidopsis thaliana... 154 5e-036
gb|BP819871.1|BP819871 BP819871 RAFL19 Arabidopsis thaliana... 98 5e-036
gb|BP656658.1|BP656658 BP656658 RAFL19 Arabidopsis thaliana... 153 6e-036
gb|AV789547.1|AV789547 AV789547 RAFL6 Arabidopsis thaliana ... 153 9e-036
gb|BP855610.1|BP855610 BP855610 RAFL21 Arabidopsis thaliana... 127 1e-035
gb|BP574678.1|BP574678 BP574678 RAFL14 Arabidopsis thaliana... 150 4e-035
gb|BP801663.1|BP801663 BP801663 RAFL14 Arabidopsis thaliana... 89 5e-035
gb|BP595302.1|BP595302 BP595302 RAFL15 Arabidopsis thaliana... 68 2e-034
gb|BP649946.1|BP649946 BP649946 RAFL19 Arabidopsis thaliana... 87 2e-034
gb|BP839479.1|BP839479 BP839479 RAFL19 Arabidopsis thaliana... 119 2e-034
gb|BP573703.1|BP573703 BP573703 RAFL14 Arabidopsis thaliana... 148 3e-034
gb|BP611180.1|BP611180 BP611180 RAFL16 Arabidopsis thaliana... 86 4e-034
gb|BP647250.1|BP647250 BP647250 RAFL19 Arabidopsis thaliana... 125 4e-034
gb|BP659553.1|BP659553 BP659553 RAFL19 Arabidopsis thaliana... 101 6e-034
gb|BP657518.1|BP657518 BP657518 RAFL19 Arabidopsis thaliana... 97 6e-034
gb|BP583356.1|BP583356 BP583356 RAFL14 Arabidopsis thaliana... 105 8e-034
gb|BP815320.1|BP815320 BP815320 RAFL19 Arabidopsis thaliana... 83 1e-033
gb|BP601934.1|BP601934 BP601934 RAFL16 Arabidopsis thaliana... 86 1e-033
gb|BP801399.1|BP801399 BP801399 RAFL14 Arabidopsis thaliana... 136 2e-033
gb|BP569056.1|BP569056 BP569056 RAFL14 Arabidopsis thaliana... 84 3e-033
gb|BP803264.1|BP803264 BP803264 RAFL14 Arabidopsis thaliana... 113 4e-033
gb|BP563794.1|BP563794 BP563794 RAFL14 Arabidopsis thaliana... 98 4e-033
gb|T13864.1|T13864 2029 Lambda-PRL2 Arabidopsis thaliana cD... 144 5e-033
gb|BP634722.1|BP634722 BP634722 RAFL17 Arabidopsis thaliana... 107 1e-032
gb|BP629963.1|BP629963 BP629963 RAFL17 Arabidopsis thaliana... 141 2e-032
gb|BP647593.1|BP647593 BP647593 RAFL19 Arabidopsis thaliana... 81 4e-032
gb|BP839970.1|BP839970 BP839970 RAFL19 Arabidopsis thaliana... 87 6e-032
gb|CF773255.1|CF773255 AG_FSL_14G11 Arabidopsis ag-1 35S:AG... 140 6e-032
gb|BP574142.1|BP574142 BP574142 RAFL14 Arabidopsis thaliana... 140 6e-032
gb|BP567844.1|BP567844 BP567844 RAFL14 Arabidopsis thaliana... 139 9e-032
gb|BP576513.1|BP576513 BP576513 RAFL14 Arabidopsis thaliana... 93 1e-031
emb|BX533607.1| Arabidopsis thaliana T-DNA flanking sequenc... 121 2e-031
gb|BP564828.1|BP564828 BP564828 RAFL14 Arabidopsis thaliana... 127 2e-031
gb|BP604569.1|BP604569 BP604569 RAFL16 Arabidopsis thaliana... 138 2e-031
gb|BP665046.1|BP665046 BP665046 RAFL21 Arabidopsis thaliana... 101 3e-031
gb|BP630794.1|BP630794 BP630794 RAFL17 Arabidopsis thaliana... 136 1e-030
gb|BP831474.1|BP831474 BP831474 RAFL19 Arabidopsis thaliana... 112 3e-030
gb|BP631002.1|BP631002 BP631002 RAFL17 Arabidopsis thaliana... 81 3e-030
gb|BP801190.1|BP801190 BP801190 RAFL14 Arabidopsis thaliana... 115 4e-030
gb|BP595871.1|BP595871 BP595871 RAFL15 Arabidopsis thaliana... 129 5e-030
gb|BP799006.1|BP799006 BP799006 RAFL14 Arabidopsis thaliana... 104 1e-029
gb|BP629322.1|BP629322 BP629322 RAFL17 Arabidopsis thaliana... 105 1e-029
gb|BP851981.1|BP851981 BP851981 RAFL21 Arabidopsis thaliana... 111 1e-029
gb|BP569257.1|BP569257 BP569257 RAFL14 Arabidopsis thaliana... 133 1e-029
gb|BP630836.1|BP630836 BP630836 RAFL17 Arabidopsis thaliana... 132 1e-029
gb|BP570153.1|BP570153 BP570153 RAFL14 Arabidopsis thaliana... 132 2e-029
gb|BP591647.1|BP591647 BP591647 RAFL15 Arabidopsis thaliana... 76 6e-029
gb|CF774080.1|CF774080 AG_FSL_27B02 Arabidopsis ag-1 35S:AG... 123 9e-029
gb|BP593635.1|BP593635 BP593635 RAFL15 Arabidopsis thaliana... 84 9e-029
gb|BP581456.1|BP581456 BP581456 RAFL14 Arabidopsis thaliana... 129 1e-028
gb|BP632442.1|BP632442 BP632442 RAFL17 Arabidopsis thaliana... 126 1e-028
gb|BP659409.1|BP659409 BP659409 RAFL19 Arabidopsis thaliana... 118 2e-028
gb|BP649530.1|BP649530 BP649530 RAFL19 Arabidopsis thaliana... 127 3e-028
gb|BP803757.1|BP803757 BP803757 RAFL14 Arabidopsis thaliana... 109 4e-028
gb|BP670710.1|BP670710 BP670710 RAFL21 Arabidopsis thaliana... 85 5e-028
gb|B24608.1|B24608 F21A19TF IGF Arabidopsis thaliana genomi... 81 6e-028
gb|BP586950.1|BP586950 BP586950 RAFL15 Arabidopsis thaliana... 127 6e-028
gb|BP671465.1|BP671465 BP671465 RAFL21 Arabidopsis thaliana... 127 6e-028
gb|BP641460.1|BP641460 BP641460 RAFL19 Arabidopsis thaliana... 62 7e-028
gb|BP656608.1|BP656608 BP656608 RAFL19 Arabidopsis thaliana... 71 3e-027
gb|BP566808.1|BP566808 BP566808 RAFL14 Arabidopsis thaliana... 124 3e-027
gb|Z17549.1|Z17549 ATTS0123 AC16H Arabidopsis thaliana cDNA... 125 3e-027
gb|BP564437.1|BP564437 BP564437 RAFL14 Arabidopsis thaliana... 105 7e-027
gb|BP583363.1|BP583363 BP583363 RAFL14 Arabidopsis thaliana... 123 8e-027
gb|BP812235.1|BP812235 BP812235 RAFL19 Arabidopsis thaliana... 63 1e-026
gb|BZ381580.1|BZ381580 SALK_116957.51.75.x Arabidopsis thal... 121 2e-026
gb|CC888027.1|CC888027 SALK_151173.46.20.x Arabidopsis thal... 121 2e-026
gb|BP583670.1|BP583670 BP583670 RAFL14 Arabidopsis thaliana... 118 3e-026
gb|BP590033.1|BP590033 BP590033 RAFL15 Arabidopsis thaliana... 120 8e-026
gb|BP804604.1|BP804604 BP804604 RAFL16 Arabidopsis thaliana... 111 9e-026
gb|BP636075.1|BP636075 BP636075 RAFL18 Arabidopsis thaliana... 119 1e-025
gb|BP633404.1|BP633404 BP633404 RAFL17 Arabidopsis thaliana... 114 2e-025
gb|BP644476.1|BP644476 BP644476 RAFL19 Arabidopsis thaliana... 118 2e-025
gb|BP575740.1|BP575740 BP575740 RAFL14 Arabidopsis thaliana... 82 6e-025
gb|BP824901.1|BP824901 BP824901 RAFL19 Arabidopsis thaliana... 58 1e-024
gb|CA781577.1|CA781577 024G01AF Infected Arabidopsis Leaf A... 89 1e-024
gb|CL492521.1|CL492521 SAIL_567_G05.v1 SAIL Collection Arab... 115 2e-024
gb|N97136.1|N97136 22315 Lambda-PRL2 Arabidopsis thaliana c... 115 2e-024
gb|BP664884.1|BP664884 BP664884 RAFL21 Arabidopsis thaliana... 115 2e-024
gb|BP667981.1|BP667981 BP667981 RAFL21 Arabidopsis thaliana... 112 2e-024
gb|AA597851.1|AA597851 29918 Lambda-PRL2 Arabidopsis thalia... 114 3e-024
gb|BP639086.1|BP639086 BP639086 RAFL19 Arabidopsis thaliana... 106 5e-024
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 112 2e-023
gb|B62040.1|B62040 T20B24TF TAMU Arabidopsis thaliana genom... 81 3e-023
emb|BX531257.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 4e-023
emb|BX531258.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 5e-023
gb|AV789863.1|AV789863 AV789863 RAFL6 Arabidopsis thaliana ... 110 6e-023
gb|BP589707.1|BP589707 BP589707 RAFL15 Arabidopsis thaliana... 109 1e-022
gb|BZ381471.1|BZ381471 SALK_116765.30.95.n Arabidopsis thal... 108 2e-022
gb|CF653073.1|CF653073 94-L020167-066-001-L24-SP6P MPIZ-ADI... 108 2e-022
gb|BP656927.1|BP656927 BP656927 RAFL19 Arabidopsis thaliana... 87 3e-022
gb|BP641877.1|BP641877 BP641877 RAFL19 Arabidopsis thaliana... 103 8e-022
gb|AV557800.1|AV557800 AV557800 Arabidopsis thaliana green ... 106 8e-022
gb|BP577125.1|BP577125 BP577125 RAFL14 Arabidopsis thaliana... 79 1e-021
gb|BP602398.1|BP602398 BP602398 RAFL16 Arabidopsis thaliana... 105 1e-021
gb|BP658014.1|BP658014 BP658014 RAFL19 Arabidopsis thaliana... 105 1e-021
gb|BP571864.1|BP571864 BP571864 RAFL14 Arabidopsis thaliana... 88 2e-021
gb|BP631731.1|BP631731 BP631731 RAFL17 Arabidopsis thaliana... 105 2e-021
gb|CC886702.1|CC886702 SALK_148920.56.00.x Arabidopsis thal... 104 4e-021
gb|BP579526.1|BP579526 BP579526 RAFL14 Arabidopsis thaliana... 76 5e-021
>gb|CB264110.1|CB264110 91-E014993-035-003-E23-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000E233Q 5-PRIME, mRNA sequence
Length = 705
Score = 380 bits (824), Expect = e-104
Identities = 158/195 (81%), Positives = 175/195 (89%)
Frame = +3 / +1
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 4 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 183
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 184 NKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 363
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKAR 602
ECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKAR
Sbjct: 364 ECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKAR 543
Query: 603 GRRNSRGFKV*VATA 647
G+R SRGF+V*+ A
Sbjct: 544 GKRKSRGFRV*IVVA 588
Score = 164 bits (352), Expect(2) = 1e-045
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / -2
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 512 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 333
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 332 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 153
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 152 TPLNLLLV 129
Score = 122 bits (261), Expect = 2e-026
Identities = 58/158 (36%), Positives = 96/158 (60%)
Frame = -3 / -1
Query: 647 GSGHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVL 468
G+ +L+ E+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL
Sbjct: 588 GNNYLNPESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVL 409
Query: 467 PKWGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLP 288
+W +E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L
Sbjct: 408 AQWSSESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLA 229
Query: 287 LHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
HE + R+R V AHE+ L+ H +E+A+ +++
Sbjct: 228 SHELHKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 115
Score = 41.8 bits (85), Expect(2) = 1e-045
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 74 DFGAVLLVFLLLPPAIRSIPIVVR 3
>gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribosomal protein L18 mRNA,
complete cds
Length = 778
Score = 380 bits (823), Expect = e-104
Identities = 159/191 (83%), Positives = 173/191 (90%)
Frame = +3 / +3
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 18 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 197
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
NR PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 198 NRAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 377
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKAR 602
ECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKAR
Sbjct: 378 ECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKAR 557
Query: 603 GRRNSRGFKV* 635
G+R SRGFKV*
Sbjct: 558 GKRKSRGFKV* 590
Score = 164 bits (352), Expect(2) = 1e-045
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / -1
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 526 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 347
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 346 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 167
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 166 TPLNLLLV 143
Score = 122 bits (262), Expect = 1e-026
Identities = 58/154 (37%), Positives = 95/154 (61%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 590 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 411
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 410 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 231
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R +V AHE+ L+ H +E+A+ +++
Sbjct: 230 HKPR*RKRSSVDFAHEKPLQYHTIELAISSPYQK 129
Score = 41.8 bits (85), Expect(2) = 1e-045
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 88 DFGAVLLVFLLLPPAIRSIPIVVR 17
>gb|AV825327.1|AV825327 AV825327 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-E24 5',
mRNA sequence
Length = 612
Score = 379 bits (821), Expect = e-104
Identities = 159/189 (84%), Positives = 174/189 (92%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 11 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNK 190
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 191 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 370
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+
Sbjct: 371 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGK 550
Query: 609 RNSRGFKV* 635
R SRGFKV*
Sbjct: 551 RKSRGFKV* 577
Score = 177 bits (382), Expect(2) = 4e-050
Identities = 85/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -1
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 510 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 331
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 330 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 151
Query: 208 ALKLL 194
ALKLL
Sbjct: 150 ALKLL 136
Score = 118 bits (253), Expect = 2e-025
Identities = 57/154 (37%), Positives = 91/154 (59%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 577 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 398
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 397 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 218
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ +R V AHE+ ++H +EVA+ H++
Sbjct: 217 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSPHQK 116
Score = 43.2 bits (88), Expect(2) = 4e-050
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 75 DLGAVLLVFLLLPPAIRSIPMA 10
>gb|AY056141.1| Arabidopsis thaliana putative 60S ribosomal protein (At5g27850)
mRNA, complete cds
Length = 893
Score = 379 bits (821), Expect = e-104
Identities = 159/189 (84%), Positives = 174/189 (92%)
Frame = +3 / +1
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 10 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNK 189
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 190 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 369
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+
Sbjct: 370 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGK 549
Query: 609 RNSRGFKV* 635
R SRGFKV*
Sbjct: 550 RKSRGFKV* 576
Score = 177 bits (382), Expect(2) = 4e-050
Identities = 85/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -1
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 509 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 330
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 329 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 150
Query: 208 ALKLL 194
ALKLL
Sbjct: 149 ALKLL 135
Score = 118 bits (253), Expect = 2e-025
Identities = 57/154 (37%), Positives = 91/154 (59%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 576 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 397
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 396 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 217
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ +R V AHE+ ++H +EVA+ H++
Sbjct: 216 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSPHQK 115
Score = 43.2 bits (88), Expect(2) = 4e-050
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 74 DLGAVLLVFLLLPPAIRSIPMA 9
>gb|BT000711.1| Arabidopsis thaliana clone RAFL09-17-C05 (R09425) putative 60S
ribosomal protein (At5g27850) mRNA, complete cds
Length = 775
Score = 379 bits (821), Expect = e-104
Identities = 159/189 (84%), Positives = 174/189 (92%)
Frame = +3 / +1
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 10 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNK 189
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 190 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 369
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+
Sbjct: 370 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGK 549
Query: 609 RNSRGFKV* 635
R SRGFKV*
Sbjct: 550 RKSRGFKV* 576
Score = 177 bits (382), Expect(2) = 4e-050
Identities = 85/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 509 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 330
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 329 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 150
Query: 208 ALKLL 194
ALKLL
Sbjct: 149 ALKLL 135
Score = 118 bits (253), Expect = 2e-025
Identities = 57/154 (37%), Positives = 91/154 (59%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 576 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 397
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 396 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 217
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ +R V AHE+ ++H +EVA+ H++
Sbjct: 216 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSPHQK 115
Score = 43.2 bits (88), Expect(2) = 4e-050
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 74 DLGAVLLVFLLLPPAIRSIPMA 9
>ref|NM_122667.2| Arabidopsis thaliana structural constituent of ribosome AT5G27850
mRNA, complete cds
Length = 878
Score = 379 bits (821), Expect = e-104
Identities = 159/189 (84%), Positives = 174/189 (92%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 11 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNK 190
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 191 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 370
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+
Sbjct: 371 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGK 550
Query: 609 RNSRGFKV* 635
R SRGFKV*
Sbjct: 551 RKSRGFKV* 577
Score = 177 bits (382), Expect(2) = 4e-050
Identities = 85/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 510 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 331
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 330 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 151
Query: 208 ALKLL 194
ALKLL
Sbjct: 150 ALKLL 136
Score = 118 bits (253), Expect = 2e-025
Identities = 57/154 (37%), Positives = 91/154 (59%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 577 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 398
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 397 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 218
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ +R V AHE+ ++H +EVA+ H++
Sbjct: 217 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSPHQK 116
Score = 43.2 bits (88), Expect(2) = 4e-050
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 75 DLGAVLLVFLLLPPAIRSIPMA 10
>gb|AV822119.1|AV822119 AV822119 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-01-F21 5',
mRNA sequence
Length = 660
Score = 378 bits (820), Expect = e-103
Identities = 158/191 (82%), Positives = 173/191 (90%)
Frame = +3 / +3
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 24 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 203
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 204 NKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 383
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKAR 602
ECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKAR
Sbjct: 384 ECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKAR 563
Query: 603 GRRNSRGFKV* 635
G+R SRGFKV*
Sbjct: 564 GKRKSRGFKV* 596
Score = 164 bits (352), Expect(2) = 1e-045
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / -3
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 532 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 353
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 352 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 173
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 172 TPLNLLLV 149
Score = 121 bits (259), Expect = 3e-026
Identities = 58/154 (37%), Positives = 94/154 (61%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 596 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 417
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 416 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 237
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R V AHE+ L+ H +E+A+ +++
Sbjct: 236 HKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 135
Score = 41.8 bits (85), Expect(2) = 1e-045
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 94 DFGAVLLVFLLLPPAIRSIPIVVR 23
>gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds
Length = 794
Score = 378 bits (820), Expect = e-103
Identities = 158/191 (82%), Positives = 173/191 (90%)
Frame = +3 / +2
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 23 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 202
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 203 NKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 382
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKAR 602
ECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKAR
Sbjct: 383 ECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKAR 562
Query: 603 GRRNSRGFKV* 635
G+R SRGFKV*
Sbjct: 563 GKRKSRGFKV* 595
Score = 164 bits (352), Expect(2) = 1e-045
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / -3
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 531 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 352
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 351 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 172
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 171 TPLNLLLV 148
Score = 121 bits (259), Expect = 3e-026
Identities = 58/154 (37%), Positives = 94/154 (61%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 595 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 416
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 415 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 236
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R V AHE+ L+ H +E+A+ +++
Sbjct: 235 HKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 134
Score = 41.8 bits (85), Expect(2) = 1e-045
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 93 DFGAVLLVFLLLPPAIRSIPIVVR 22
>ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROTEIN L18); structural
constituent of ribosome AT3G05590 (RPL18) mRNA, complete
cds
Length = 834
Score = 378 bits (820), Expect = e-103
Identities = 158/191 (82%), Positives = 173/191 (90%)
Frame = +3 / +2
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 23 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 202
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 203 NKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 382
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKAR 602
ECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKAR
Sbjct: 383 ECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKAR 562
Query: 603 GRRNSRGFKV* 635
G+R SRGFKV*
Sbjct: 563 GKRKSRGFKV* 595
Score = 164 bits (352), Expect(2) = 1e-045
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / -1
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 531 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 352
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 351 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 172
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 171 TPLNLLLV 148
Score = 121 bits (259), Expect = 3e-026
Identities = 58/154 (37%), Positives = 94/154 (61%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 595 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 416
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 415 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 236
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R V AHE+ L+ H +E+A+ +++
Sbjct: 235 HKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 134
Score = 41.8 bits (85), Expect(2) = 1e-045
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 93 DFGAVLLVFLLLPPAIRSIPIVVR 22
>gb|AY122996.1| Arabidopsis thaliana putative 60S ribosomal protein (At5g27850)
mRNA, complete cds
Length = 595
Score = 377 bits (817), Expect = e-103
Identities = 158/188 (84%), Positives = 173/188 (92%)
Frame = +3 / +1
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 180
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECL
Sbjct: 181 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 360
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+R
Sbjct: 361 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 540
Query: 612 NSRGFKV* 635
SRGFKV*
Sbjct: 541 KSRGFKV* 564
Score = 177 bits (382), Expect(2) = 7e-049
Identities = 85/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 497 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 318
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 317 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 138
Query: 208 ALKLL 194
ALKLL
Sbjct: 137 ALKLL 123
Score = 118 bits (253), Expect = 2e-025
Identities = 57/154 (37%), Positives = 91/154 (59%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 564 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 385
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 384 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 205
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ +R V AHE+ ++H +EVA+ H++
Sbjct: 204 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSPHQK 103
Score = 39.1 bits (79), Expect(2) = 7e-049
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIP 74
DLGAV LVFLL PPA RSIP
Sbjct: 62 DLGAVLLVFLLLPPAIRSIP 3
>emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB67ZC09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 714
Score = 374 bits (812), Expect = e-102
Identities = 157/191 (82%), Positives = 172/191 (90%)
Frame = +3 / +2
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 14 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 193
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV M GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 194 NKAPLSLSRLVECMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 373
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKAR 602
ECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKAR
Sbjct: 374 ECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKAR 553
Query: 603 GRRNSRGFKV* 635
G+R SRGFKV*
Sbjct: 554 GKRKSRGFKV* 586
Score = 161 bits (347), Expect(2) = 7e-045
Identities = 80/128 (62%), Positives = 86/128 (67%)
Frame = -1 / -1
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 522 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 343
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P M+ T E G L LLMK I
Sbjct: 342 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMHSTSLDRERGALLTLLMKSLFNI 163
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 162 TPLNLLLV 139
Score = 118 bits (253), Expect = 2e-025
Identities = 57/154 (37%), Positives = 93/154 (60%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 586 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 407
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L H
Sbjct: 406 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHAL 227
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R V AHE+ L+ H +E+A+ +++
Sbjct: 226 HKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 125
Score = 41.8 bits (85), Expect(2) = 7e-045
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 84 DFGAVLLVFLLLPPAIRSIPIVVR 13
>gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds
Length = 564
Score = 374 bits (810), Expect = e-102
Identities = 156/188 (82%), Positives = 171/188 (90%)
Frame = +3 / +1
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 180
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECL
Sbjct: 181 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 360
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R
Sbjct: 361 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 540
Query: 612 NSRGFKV* 635
SRGFKV*
Sbjct: 541 KSRGFKV* 564
Score = 164 bits (352), Expect(2) = 3e-044
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / -2
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 500 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 321
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 320 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 141
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 140 TPLNLLLV 117
Score = 121 bits (259), Expect = 3e-026
Identities = 58/154 (37%), Positives = 94/154 (61%)
Frame = -3 / -1
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 564 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 385
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 384 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 205
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R V AHE+ L+ H +E+A+ +++
Sbjct: 204 HKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 103
Score = 37.3 bits (75), Expect(2) = 3e-044
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPPATRSIP 74
D GAV LVFLL PPA RSIP
Sbjct: 62 DFGAVLLVFLLLPPAIRSIP 3
>gb|CF652156.1|CF652156 37-L020525-066-003-J09-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001J093Q 5-PRIME, mRNA sequence
Length = 799
Score = 372 bits (806), Expect = e-101
Identities = 156/186 (83%), Positives = 171/186 (91%)
Frame = +3 / +1
Query: 78 IDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPL 257
IDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ PL
Sbjct: 1 IDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPL 180
Query: 258 SMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTF 437
S+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTF
Sbjct: 181 SLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTF 360
Query: 438 DQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNS 617
DQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+R S
Sbjct: 361 DQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKS 540
Query: 618 RGFKV* 635
RGFKV*
Sbjct: 541 RGFKV* 558
Score = 177 bits (382), Expect(2) = 2e-047
Identities = 85/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 491 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 312
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 311 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 132
Query: 208 ALKLL 194
ALKLL
Sbjct: 131 ALKLL 117
Score = 118 bits (253), Expect = 2e-025
Identities = 57/154 (37%), Positives = 91/154 (59%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 558 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 379
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 378 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 199
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ +R V AHE+ ++H +EVA+ H++
Sbjct: 198 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSPHQK 97
Score = 34.1 bits (68), Expect(2) = 2e-047
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRS 80
DLGAV LVFLL PPA RS
Sbjct: 56 DLGAVLLVFLLLPPAIRS 3
>gb|CF652057.1|CF652057 31-L020362-066-002-N08-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001N082Q 5-PRIME, mRNA sequence
Length = 777
Score = 370 bits (802), Expect = e-101
Identities = 155/185 (83%), Positives = 170/185 (91%)
Frame = +3 / +2
Query: 81 DLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLS 260
DL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ PLS
Sbjct: 2 DLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLS 181
Query: 261 MRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFD 440
+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFD
Sbjct: 182 LSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFD 361
Query: 441 QLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 620
QLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+R SR
Sbjct: 362 QLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSR 541
Query: 621 GFKV* 635
GFKV*
Sbjct: 542 GFKV* 556
Score = 177 bits (382), Expect(2) = 2e-047
Identities = 85/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -1
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 489 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 310
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 309 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 130
Query: 208 ALKLL 194
ALKLL
Sbjct: 129 ALKLL 115
Score = 120 bits (257), Expect = 6e-026
Identities = 58/154 (37%), Positives = 92/154 (59%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 556 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 377
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 376 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 197
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ +R V AHE+ L++H +EVA+ H++
Sbjct: 196 YKPRE*KRSFVDFAHEKPLQNHSIEVAVRSPHQK 95
Score = 34.1 bits (68), Expect(2) = 2e-047
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRS 80
DLGAV LVFLL PPA RS
Sbjct: 54 DLGAVLLVFLLLPPAIRS 1
>gb|CA781829.1|CA781829 051E12AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 725
Score = 369 bits (799), Expect = e-100
Identities = 154/186 (82%), Positives = 169/186 (90%)
Frame = +3 / +1
Query: 78 IDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPL 257
IDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+ PL
Sbjct: 1 IDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPL 180
Query: 258 SMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTF 437
S+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTF
Sbjct: 181 SLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTF 360
Query: 438 DQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNS 617
DQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R S
Sbjct: 361 DQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKS 540
Query: 618 RGFKV* 635
RGFKV*
Sbjct: 541 RGFKV* 558
Score = 164 bits (352), Expect(2) = 1e-042
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / -1
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 494 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 315
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 314 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 135
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 134 TPLNLLLV 111
Score = 121 bits (259), Expect = 3e-026
Identities = 58/154 (37%), Positives = 94/154 (61%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 558 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 379
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 378 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 199
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R V AHE+ L+ H +E+A+ +++
Sbjct: 198 HKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 97
Score = 32.2 bits (64), Expect(2) = 1e-042
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRS 80
D GAV LVFLL PPA RS
Sbjct: 56 DFGAVLLVFLLLPPAIRS 3
>emb|BX822675.1|CNS0A7MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB57ZH02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 722
Score = 365 bits (792), Expect = e-100
Identities = 153/187 (81%), Positives = 170/187 (90%)
Frame = +3 / +2
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
GIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+ P
Sbjct: 2 GIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAP 181
Query: 255 LSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLT 434
LS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLT
Sbjct: 182 LSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLT 361
Query: 435 FDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRN 614
FDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVP+S++KPYVR+KGRKFEKARG+R
Sbjct: 362 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPYSNSKPYVRAKGRKFEKARGKRK 541
Query: 615 SRGFKV* 635
SRGFKV*
Sbjct: 542 SRGFKV* 562
Score = 165 bits (354), Expect(2) = 2e-044
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / -3
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 498 RTYGLELLYGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 319
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 318 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 139
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 138 TPLNLLLV 115
Score = 120 bits (257), Expect = 6e-026
Identities = 58/154 (37%), Positives = 94/154 (61%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 562 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 383
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 382 SESELVKG*AFTSSFLNASPCSLCEPQGSYFHGWNLVYPQIISYSSNQDGNLIFLASHEL 203
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R V AHE+ L+ H +E+A+ +++
Sbjct: 202 HKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 101
Score = 37.3 bits (75), Expect(2) = 2e-044
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIP 74
D GAV LVFLL PPA RSIP
Sbjct: 60 DFGAVLLVFLLLPPAIRSIP 1
>gb|BE038821.1|BE038821 AB07C09 AB Arabidopsis thaliana cDNA 5' similar to 60s ribosomal
protein l18, mRNA sequence
Length = 702
Score = 362 bits (785), Expect = 8e-099
Identities = 152/181 (83%), Positives = 166/181 (91%)
Frame = +3 / +1
Query: 93 GGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRL 272
GG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ PLS+ RL
Sbjct: 7 GGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRL 186
Query: 273 VRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLAL 452
V FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLAL
Sbjct: 187 VEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLAL 366
Query: 453 RAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 632
RAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+R SRGFKV
Sbjct: 367 RAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 546
Query: 633 * 635
*
Sbjct: 547 * 549
Score = 177 bits (382), Expect(2) = 1e-045
Identities = 85/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -2
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 482 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 303
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 302 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 123
Query: 208 ALKLL 194
ALKLL
Sbjct: 122 ALKLL 108
Score = 118 bits (253), Expect = 2e-025
Identities = 57/154 (37%), Positives = 91/154 (59%)
Frame = -3 / -1
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 549 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 370
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 369 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 190
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ +R V AHE+ ++H +EVA+ H++
Sbjct: 189 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSPHQK 88
Score = 28.6 bits (56), Expect(2) = 1e-045
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPP 92
DLGAV LVFLL PP
Sbjct: 47 DLGAVLLVFLLLPP 6
>gb|CB254873.1|CB254873 57-E018361-019-007-A16-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A167Q 5-PRIME, mRNA sequence
Length = 544
Score = 347 bits (753), Expect = 2e-094
Identities = 146/181 (80%), Positives = 162/181 (89%)
Frame = +3 / +2
Query: 81 DLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLS 260
DL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ PLS
Sbjct: 2 DLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLS 181
Query: 261 MRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFD 440
+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFD
Sbjct: 182 LSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFD 361
Query: 441 QLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 620
QLALRAPLGQNTVLL GPKN+REAV+HF PAPGVPHS+TKPYVR KG KF+ ARG+R SR
Sbjct: 362 QLALRAPLGQNTVLLIGPKNSREAVKHFRPAPGVPHSNTKPYVRHKGTKFDIARGKRKSR 541
Query: 621 G 623
G
Sbjct: 542 G 544
Score = 172 bits (370), Expect(2) = 1e-045
Identities = 83/125 (66%), Positives = 88/125 (70%)
Frame = -1 / -2
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAG KC TAS F GP+ RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 489 TYGLVLLCGTPGAGLKCFTASREFFGPIRRTVFCPNGALRASWSKVKHSPPAFSILALAL 310
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 309 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 130
Query: 208 ALKLL 194
ALKLL
Sbjct: 129 ALKLL 115
Score = 105 bits (224), Expect = 2e-021
Identities = 51/144 (35%), Positives = 85/144 (59%)
Frame = -3 / -1
Query: 605 SSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEA 426
SS +KL +L NI L V V H+ R E+ F VL + ++N VL +W +E +LV+G A
Sbjct: 526 SSSYIKLRSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSYKKNCVLSQWSSESKLVKG*A 347
Query: 425 LSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEPDEAAHRERRA 246
LS+S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE + +R
Sbjct: 346 LSSSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHELYKPRE*KRSF 167
Query: 245 VGLAHEEALEDHGVEVALCPAHKE 174
V AHE+ ++H +EVA+ H++
Sbjct: 166 VDFAHEKPFQNHSIEVAVRSPHQK 95
Score = 34.1 bits (68), Expect(2) = 1e-045
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPPATRS 80
DLGAV LVFLL PPA RS
Sbjct: 54 DLGAVLLVFLLLPPAIRS 1
>gb|AV559994.1|AV559994 AV559994 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ127b11F 3', mRNA sequence
Length = 504
Score = 327 bits (709), Expect = 2e-088
Identities = 136/166 (81%), Positives = 149/166 (89%)
Frame = +3 / +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDL+AGG++ KTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+
Sbjct: 6 MGIDLIAGGKSNKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 185
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECL
Sbjct: 186 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 365
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYV 569
TFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYV
Sbjct: 366 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYV 503
Score = 161 bits (347), Expect(2) = 7e-043
Identities = 80/127 (62%), Positives = 85/127 (66%)
Frame = -1 / -3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA+
Sbjct: 502 TYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALAL 323
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK IT
Sbjct: 322 SVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNIT 143
Query: 208 ALKLLFV 188
L LL V
Sbjct: 142 PLNLLLV 122
Score = 35.0 bits (70), Expect(2) = 7e-043
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIPM 71
D GAV LV LL PPA RSIP+
Sbjct: 67 DFGAVLLVLLLLPPAIRSIPI 5
>gb|AV550190.1|AV550190 AV550190 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109e04R 5', mRNA sequence
Length = 518
Score = 324 bits (701), Expect = 3e-087
Identities = 135/165 (81%), Positives = 148/165 (89%)
Frame = +3 / +1
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 22 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 201
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 202 NKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 381
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHT 557
ECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+
Sbjct: 382 ECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHS 516
Score = 159 bits (342), Expect(2) = 3e-044
Identities = 76/119 (63%), Positives = 81/119 (68%)
Frame = -1 / -1
Query: 544 GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAVSVNLSAQT 365
GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA+SVNL A T
Sbjct: 503 GTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALALSVNLKAVT 324
Query: 364 FIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFV 188
F+AG S L SSV VPT TAI S P MN T E G L LLMK IT L LL V
Sbjct: 323 FMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNITPLNLLLV 147
Score = 41.8 bits (85), Expect(2) = 3e-044
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 92 DFGAVLLVFLLLPPAIRSIPIVVR 21
>gb|AV782778.1|AV782778 AV782778 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-01-F21 3',
mRNA sequence
Length = 687
Score = 317 bits (686), Expect = 4e-085
Identities = 133/162 (82%), Positives = 145/162 (89%)
Frame = +3 / -3
Query: 150 KLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFMEGKGDQIAVIVGTVT 329
KL VKLYRFLVRRT S FN VILKRLFMSK N+ PLS+ RLV FM GK D+IAV+VGT+T
Sbjct: 685 KLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTIT 506
Query: 330 DDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVLLRGPKNARE 509
DD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNTVLLRGPKN+RE
Sbjct: 505 DDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSRE 326
Query: 510 AVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
AV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 325 AVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 200
Score = 164 bits (352), Expect = 4e-039
Identities = 81/128 (63%), Positives = 86/128 (67%)
Frame = -1 / +3
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 264 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 443
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRI 212
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK I
Sbjct: 444 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMKSLFNI 623
Query: 211 TALKLLFV 188
T L LL V
Sbjct: 624 TPLNLLLV 647
Score = 121 bits (259), Expect = 3e-026
Identities = 58/154 (37%), Positives = 94/154 (61%)
Frame = -3 / +2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 200 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 379
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 380 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 559
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
+ R+R V AHE+ L+ H +E+A+ +++
Sbjct: 560 HKPR*RKRSFVDFAHEKPLQYHTIELAISSPYQK 661
>gb|AV827922.1|AV827922 AV827922 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-B03 5',
mRNA sequence
Length = 583
Score = 234 bits (505), Expect(3) = 8e-084
Identities = 100/133 (75%), Positives = 114/133 (85%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 11 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNK 190
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 191 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 370
Query: 429 LTFDQLALRAPLG 467
LTF ++ +G
Sbjct: 371 LTF*PACSQSSIG 409
Score = 101 bits (215), Expect(4) = 8e-042
Identities = 52/81 (64%), Positives = 55/81 (67%)
Frame = -1 / -2
Query: 436 KVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIE 257
KV+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P MN T E
Sbjct: 378 KVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESE 199
Query: 256 SGGRLVLLMKRRLRITALKLL 194
G L LLMK RITALKLL
Sbjct: 198 RGALLTLLMKSLFRITALKLL 136
Score = 94.1 bits (199), Expect(3) = 8e-084
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +3 / +1
Query: 480 LLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
LLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKA
Sbjct: 424 LLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKA 543
Score = 51.0 bits (105), Expect(4) = 8e-042
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -1 / -3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSR 479
T GLV L GTPGAGPKC TAS F GPL R
Sbjct: 512 TYGLVLLCGTPGAGPKCFTASREFFGPLRR 423
Score = 43.2 bits (88), Expect(4) = 8e-042
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 75 DLGAVLLVFLLLPPAIRSIPMA 10
Score = 33.6 bits (67), Expect(4) = 8e-042
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / -1
Query: 478 TVFCPSGARSASWSK 434
TVFCP+GA ASWSK
Sbjct: 421 TVFCPNGALRASWSK 377
Score = 24.4 bits (47), Expect(3) = 8e-084
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 594 KARGRRNSRGFKV* 635
K RG+R S GFKV*
Sbjct: 539 KPRGKRKSXGFKV* 580
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence,
complete sequence
Length = 100887
Score = 121 bits (258), Expect(4) = 6e-081
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +3 / -1
Query: 297 DQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNT 476
D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNT
Sbjct: 84786 DKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNT 84607
Query: 477 VLL 485
V L
Sbjct: 84606 VFL 84598
Score = 120 bits (257), Expect(4) = 6e-081
Identities = 47/53 (88%), Positives = 52/53 (98%)
Frame = +3 / -1
Query: 477 VLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
VLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 84516 VLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 84358
Score = 88.6 bits (187), Expect(3) = 4e-027
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = -1 / +2
Query: 478 TVFCPSGARSASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI* 299
TVF P+GA ASWSKV+HSPPA + ALA+SVNL A TF+AG S L SSV VPT TAI
Sbjct: 84605 TVFWPNGALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAIL 84784
Query: 298 SPF 290
S +
Sbjct: 84785 SSY 84793
Score = 79.9 bits (168), Expect(4) = 6e-081
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 156 LVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFMEGK 293
+++LYRFLVRRT S FN VILKRLFMSK N+ PLS+ RLV FM GK
Sbjct: 85148 ILQLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGK 85011
Score = 65.7 bits (137), Expect(4) = 6e-081
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +3 / -1
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKL 167
GIDL+AGG++KKTKRTAPKSDDVYLKL VK+
Sbjct: 85341 GIDLIAGGKSKKTKRTAPKSDDVYLKLTVKV 85249
Score = 53.8 bits (111), Expect(3) = 4e-027
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = -1 / +2
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRT 476
RT GL L GTPGAGPKC TAS FLGPL RT
Sbjct: 84422 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRT 84517
Score = 37.3 bits (75), Expect(3) = 4e-027
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -1 / +2
Query: 133 DLGAVRLVFLLRPPATRSIP 74
D GAV LVFLL PPA RSIP
Sbjct: 85283 DFGAVLLVFLLLPPAIRSIP 85342
>gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from chromosome V near 69 cM,
complete sequence
Length = 105223
Score = 119 bits (254), Expect(4) = 1e-080
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +3 / +3
Query: 297 DQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNT 476
D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNT
Sbjct: 3405 DKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNT 3584
Query: 477 V 479
V
Sbjct: 3585 V 3587
Score = 118 bits (252), Expect(4) = 1e-080
Identities = 47/53 (88%), Positives = 51/53 (96%)
Frame = +3 / +1
Query: 477 VLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
VLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+R SRGFKV*
Sbjct: 3670 VLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV* 3828
Score = 95.5 bits (202), Expect(4) = 3e-033
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = -1 / -1
Query: 478 TVFCPSGARSASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
TVFCP+GA ASWSKV+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI
Sbjct: 3586 TVFCPNGALRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAI 3410
Score = 80.8 bits (170), Expect(4) = 1e-080
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +3 / +1
Query: 165 LYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFMEGK 293
LYRFLVRR+ SNFNAVILKRLFMSK N+ PLS+ RLV FM GK
Sbjct: 3052 LYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGK 3180
Score = 68.0 bits (142), Expect(4) = 1e-080
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +3 / +1
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKL 167
GIDL+AGG++KKTKRTAPKSDDVYLKLLVK+
Sbjct: 2869 GIDLIAGGKSKKTKRTAPKSDDVYLKLLVKV 2961
Score = 53.3 bits (110), Expect(4) = 3e-033
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -1 / -3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRT 476
T GLV L GTPGAGPKC TAS F GPL RT
Sbjct: 3761 TYGLVLLCGTPGAGPKCFTASREFFGPLRRT 3669
Score = 39.1 bits (79), Expect(4) = 3e-033
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIP 74
DLGAV LVFLL PPA RSIP
Sbjct: 2927 DLGAVLLVFLLLPPAIRSIP 2868
Score = 37.7 bits (76), Expect(4) = 3e-033
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / -3
Query: 289 PSMNLTRRRIESGGRLVLLMKRRLRITALKLL 194
P MN T E G L LLMK RITALKLL
Sbjct: 3176 PVMNSTSLESERGALLTLLMKSLFRITALKLL 3081
>gb|AV535094.1|AV535094 AV535094 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB090h08F 3', mRNA sequence
Length = 596
Score = 281 bits (608), Expect = 2e-074
Identities = 118/143 (82%), Positives = 129/143 (90%)
Frame = +3 / -2
Query: 207 AVILKRLFMSKTNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFT 386
AVILKRLFMSK N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFT
Sbjct: 595 AVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFT 416
Query: 387 ETARARIINAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPY 566
E ARARI AGGECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPY
Sbjct: 415 ERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPY 236
Query: 567 VRSKGRKFEKARGRRNSRGFKV* 635
VR KGRKFEKARG+R SRGFKV*
Sbjct: 235 VRHKGRKFEKARGKRKSRGFKV* 167
Score = 170 bits (365), Expect = 7e-041
Identities = 81/121 (66%), Positives = 85/121 (70%)
Frame = -1 / +3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 234 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 413
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRIT 209
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK RIT
Sbjct: 414 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMKSLFRIT 593
Query: 208 A 206
A
Sbjct: 594 A 596
Score = 108 bits (231), Expect = 2e-022
Identities = 53/142 (37%), Positives = 83/142 (58%)
Frame = -3 / +2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
LDLE+ + SS LKLP+L NI L V V H+ R E+ F VL + ++N VL +W
Sbjct: 167 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 346
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E +LV+G ALS S + P LS+P+ ++LH R+L + ++ ++ H +L+ L HE
Sbjct: 347 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 526
Query: 275 DEAAHRERRAVGLAHEEALEDH 210
+ +R V AHE+ ++H
Sbjct: 527 YKPRE*KRSFVDFAHEKPFQNH 592
>gb|AW004212.1|AW004212 701549078 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549078, mRNA sequence
Length = 578
Score = 277 bits (600), Expect = 3e-073
Identities = 115/140 (82%), Positives = 127/140 (90%)
Frame = +3 / -1
Query: 216 LKRLFMSKTNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETA 395
LKRLFMSK N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE A
Sbjct: 578 LKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERA 399
Query: 396 RARIINAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRS 575
RARI AGGECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+
Sbjct: 398 RARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRA 219
Query: 576 KGRKFEKARGRRNSRGFKV* 635
KGRKFEKARG+R SRGFKV*
Sbjct: 218 KGRKFEKARGKRKSRGFKV* 159
Score = 154 bits (331), Expect = 3e-036
Identities = 75/115 (65%), Positives = 80/115 (69%)
Frame = -1 / +1
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 223 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 402
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMK 227
+SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK
Sbjct: 403 LSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLMK 567
Score = 112 bits (240), Expect = 1e-023
Identities = 55/140 (39%), Positives = 85/140 (60%)
Frame = -3 / +3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LE+ +P SS LL+LP+L NI LGV V H+ R E+ F +LR+ ++NRVL +W
Sbjct: 159 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 338
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
+E ELV+G A ++S + P L EP+ + H +L P ++ + ++ G+LI L HE
Sbjct: 339 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 518
Query: 275 DEAAHRERRAVGLAHEEALE 216
+ R+R V AHE+ L+
Sbjct: 519 HKPR*RKRSFVDFAHEKPLQ 578
>emb|BX832577.1|CNS0A1WZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH81ZE08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 644
Score = 269 bits (582), Expect = 8e-071
Identities = 112/137 (81%), Positives = 123/137 (89%)
Frame = +3 / +3
Query: 225 LFMSKTNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARAR 404
LFMSK N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARAR
Sbjct: 3 LFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARAR 182
Query: 405 IINAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGR 584
I AGGECLTFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGR
Sbjct: 183 IEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGR 362
Query: 585 KFEKARGRRNSRGFKV* 635
KFEKARG+R SRGFKV*
Sbjct: 363 KFEKARGKRKSRGFKV* 413
Score = 163 bits (350), Expect = 8e-039
Identities = 77/114 (67%), Positives = 81/114 (71%)
Frame = -1 / -2
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 346 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 167
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMK 227
SVNL A TF+AG S L SSV VPT TAI S P MN T E G L LLMK
Sbjct: 166 SVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERGALLTLLMK 5
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
sequence
Length = 98937
Score = 112 bits (239), Expect(4) = 6e-070
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +3 / +1
Query: 477 VLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
VLLRGPKN REAV+HFGPAPGVPHSHTKPYVR G+K E ARGRR SRGFKV*
Sbjct: 32584 VLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV* 32742
Score = 95.9 bits (203), Expect(4) = 6e-070
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +3 / +1
Query: 300 QIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAP 461
+IAVIVGTVTDD RI +VPA+ V ALRFTE+ARARI AGGECLTFDQLAL P
Sbjct: 32095 KIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCP 32256
Score = 82.2 bits (173), Expect(4) = 8e-036
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = -1 / -2
Query: 460 GARSASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
G AS SKVRHSPPAL ILALA+SVNL+A T AGTS IL SSVTVPTITAI
Sbjct: 32255 GHGRAS*SKVRHSPPALWILALALSVNLNAVTVRAGTSSILTSSVTVPTITAI 32097
Score = 76.2 bits (160), Expect(4) = 6e-070
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +3 / +3
Query: 171 RFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFMEGK 293
R+LVRRT+S FNAVILKRLFMSK N+ PLS+ RLVR+M+GK
Sbjct: 31863 RYLVRRTESKFNAVILKRLFMSKVNKAPLSLSRLVRYMDGK 31985
Score = 68.4 bits (143), Expect(4) = 8e-036
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = -1 / -2
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRT 476
RT GLVWL*GTPGAGPKC TAS FLGPLSRT
Sbjct: 32678 RTYGLVWL*GTPGAGPKCFTASRVFLGPLSRT 32583
Score = 65.7 bits (137), Expect(4) = 6e-070
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +3 / +2
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKL 167
GIDL+AGG++KKTKRT PKSDDVYLKLLVK+
Sbjct: 31715 GIDLIAGGKSKKTKRTEPKSDDVYLKLLVKV 31807
Score = 46.0 bits (94), Expect(4) = 8e-036
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -3 / -2
Query: 293 LPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHK 177
L +H D+ R+ R V AHE+ L++HG+E+A C H+
Sbjct: 31985 LSVHVSDQTRERQWRFVHFAHEQTLQNHGIELAFCSPHQ 31869
Score = 37.7 bits (76), Expect(4) = 8e-036
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIP 74
DLG+VR VFLL PPA +SIP
Sbjct: 31773 DLGSVRFVFLLLPPAIKSIP 31714
>gb|BP853538.1|BP853538 BP853538 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-58-J07 5',
mRNA sequence
Length = 396
Score = 244 bits (528), Expect = 2e-063
Identities = 104/129 (80%), Positives = 115/129 (89%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRT PKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 9 AMGIDLIAGGKSKKTKRTGPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNK 188
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 189 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 368
Query: 429 LTFDQLALR 455
LTFDQLALR
Sbjct: 369 LTFDQLALR 395
Score = 111 bits (238), Expect(2) = 1e-029
Identities = 56/85 (65%), Positives = 59/85 (69%)
Frame = -1 / -3
Query: 448 ASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTR 269
ASWSKV+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P MN T
Sbjct: 388 ASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTS 209
Query: 268 RRIESGGRLVLLMKRRLRITALKLL 194
E G L LLMK RITALKLL
Sbjct: 208 LESERGALLTLLMKSLFRITALKLL 134
Score = 40.9 bits (83), Expect(2) = 1e-029
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLG V LVFLL PPA RSIPMA
Sbjct: 73 DLGPVLLVFLLLPPAIRSIPMA 8
>gb|BP820622.1|BP820622 BP820622 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-55-C07 5',
mRNA sequence
Length = 397
Score = 242 bits (522), Expect = 2e-062
Identities = 103/129 (79%), Positives = 114/129 (88%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK N+
Sbjct: 9 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSKVNK 188
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV LRFTE ARARI AGGEC
Sbjct: 189 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTGLRFTERARARIEKAGGEC 368
Query: 429 LTFDQLALR 455
LTFDQLALR
Sbjct: 369 LTFDQLALR 395
Score = 110 bits (234), Expect(2) = 7e-030
Identities = 56/88 (63%), Positives = 59/88 (67%)
Frame = -1 / -1
Query: 457 ARSASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMN 278
A ASWSKV+HSPPA ILALA+SVNL TF+AG S L SSV VPT TAI S P MN
Sbjct: 397 ALRASWSKVKHSPPAFSILALALSVNLKPVTFMAGIS*TLKSSVIVPTNTAILSSLPVMN 218
Query: 277 LTRRRIESGGRLVLLMKRRLRITALKLL 194
T E G L LLMK RITALKLL
Sbjct: 217 STSLESERGALLTLLMKSLFRITALKLL 134
Score = 43.2 bits (88), Expect(2) = 7e-030
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 73 DLGAVLLVFLLLPPAIRSIPMA 8
>gb|AV552450.1|AV552450 AV552450 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ30a02R 5', mRNA sequence
Length = 408
Score = 212 bits (458), Expect(2) = 4e-062
Identities = 91/113 (80%), Positives = 99/113 (87%)
Frame = +3 / +2
Query: 108 KTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFME 287
KTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ PLS+ RLV FM
Sbjct: 2 KTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMT 181
Query: 288 GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQL 446
GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFD L
Sbjct: 182 GKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDHL 340
Score = 108 bits (231), Expect(2) = 1e-027
Identities = 54/85 (63%), Positives = 58/85 (68%)
Frame = -1 / -1
Query: 448 ASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTR 269
+ WSKV+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P MN T
Sbjct: 342 SKWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTS 163
Query: 268 RRIESGGRLVLLMKRRLRITALKLL 194
E G L LLMK RITALKLL
Sbjct: 162 LESERGALLTLLMKSLFRITALKLL 88
Score = 48.7 bits (100), Expect(2) = 4e-062
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3 / +1
Query: 444 LALRAPLGQNTVLLRGPKNAREAV 515
LALRA LGQNTVLLRGP N+REAV
Sbjct: 337 LALRAQLGQNTVLLRGPXNSREAV 408
Score = 36.8 bits (74), Expect(2) = 1e-027
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -1 / -2
Query: 514 TASLAFLGPLSRTVFCPSGARSASWSKV 431
TAS F GPL RTVFCP+ A AS ++
Sbjct: 407 TASREFXGPLRRTVFCPN*ALRASGQRL 324
>gb|BP813190.1|BP813190 BP813190 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-05-K17 5',
mRNA sequence
Length = 405
Score = 232 bits (501), Expect(2) = 5e-061
Identities = 99/126 (78%), Positives = 110/126 (87%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 12 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNK 191
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 192 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 371
Query: 429 LTFDQL 446
LT L
Sbjct: 372 LTLTSL 389
Score = 101 bits (215), Expect(2) = 3e-027
Identities = 52/81 (64%), Positives = 55/81 (67%)
Frame = -1 / -3
Query: 436 KVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIE 257
KV+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P MN T E
Sbjct: 379 KVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESE 200
Query: 256 SGGRLVLLMKRRLRITALKLL 194
G L LLMK RITALKLL
Sbjct: 199 RGALLTLLMKSLFRITALKLL 137
Score = 43.2 bits (88), Expect(2) = 3e-027
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 76 DLGAVLLVFLLLPPAIRSIPMA 11
Score = 25.4 bits (49), Expect(2) = 5e-061
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 429 LTFDQLALRAP 461
L FDQLALRAP
Sbjct: 371 LNFDQLALRAP 403
>gb|AV552035.1|AV552035 AV552035 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ19d02R 5', mRNA sequence
Length = 374
Score = 236 bits (510), Expect = 7e-061
Identities = 101/124 (81%), Positives = 111/124 (89%)
Frame = +3 / +2
Query: 99 RNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVR 278
++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ PLS+ RLV
Sbjct: 2 KSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVE 181
Query: 279 FMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRA 458
FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRA
Sbjct: 182 FMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRA 361
Query: 459 PLGQ 470
PLGQ
Sbjct: 362 PLGQ 373
Score = 122 bits (262), Expect(2) = 1e-027
Identities = 60/92 (65%), Positives = 64/92 (69%)
Frame = -1 / -3
Query: 469 CPSGARSASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPF 290
CP+GA ASWSKV+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S
Sbjct: 372 CPNGALRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSL 193
Query: 289 PSMNLTRRRIESGGRLVLLMKRRLRITALKLL 194
P MN T E G L LLMK RITALKLL
Sbjct: 192 PVMNSTSLESERGALLTLLMKSLFRITALKLL 97
Score = 23.1 bits (44), Expect(2) = 1e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLL 101
DLGAV LVFLL
Sbjct: 36 DLGAVLLVFLL 4
>gb|BP844795.1|BP844795 BP844795 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-91-I17 5',
mRNA sequence
Length = 410
Score = 236 bits (509), Expect = 1e-060
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +3 / +3
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 30 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 209
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 210 NKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 389
Query: 423 ECLTFDQ 443
ECLTFDQ
Sbjct: 390 ECLTFDQ 410
Score = 99.1 bits (210), Expect(2) = 3e-026
Identities = 50/85 (58%), Positives = 54/85 (63%)
Frame = -1 / -2
Query: 442 WSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRR 263
WSKV+HSPPA + ALA+SVNL A TF+AG S L SSV VPT TAI S P MN T
Sbjct: 409 WSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLD 230
Query: 262 IESGGRLVLLMKRRLRITALKLLFV 188
E G L LLMK IT L LL V
Sbjct: 229 RERGALLTLLMKSLFNITPLNLLLV 155
Score = 41.8 bits (85), Expect(2) = 3e-026
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 100 DFGAVLLVFLLLPPAIRSIPIVVR 29
>emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB9ZC10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 575
Score = 235 bits (507), Expect = 2e-060
Identities = 96/113 (84%), Positives = 106/113 (93%)
Frame = +3 / +3
Query: 297 DQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNT 476
D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNT
Sbjct: 6 DKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNT 185
Query: 477 VLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
VLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 186 VLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 344
Score = 138 bits (295), Expect = 3e-031
Identities = 64/90 (71%), Positives = 69/90 (76%)
Frame = -1 / -2
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKCLTAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 280 RTYGLE*LCGTPGAGPKCLTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 101
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
+SVNL A TF+AG S L SSV VPT TAI
Sbjct: 100 LSVNLKAVTFMAGISCTLKSSVIVPTKTAI 11
>gb|AV542782.1|AV542782 AV542782 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ19d02F 3', mRNA sequence
Length = 419
Score = 234 bits (506), Expect = 2e-060
Identities = 97/115 (84%), Positives = 106/115 (92%)
Frame = +3 / -2
Query: 291 KGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQ 470
K D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQ
Sbjct: 418 KDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQ 239
Query: 471 NTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
NTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+R SRGFKV*
Sbjct: 238 NTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV* 74
Score = 143 bits (307), Expect = 7e-033
Identities = 65/89 (73%), Positives = 69/89 (77%)
Frame = -1 / +3
Query: 568 T*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAV 389
T GLV L GTPGAGPKC TAS F GPL RTVFCP+GA ASWSKV+HSPPA ILALA+
Sbjct: 141 TYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGALRASWSKVKHSPPAFSILALAL 320
Query: 388 SVNLSAQTFIAGTSLILLSSVTVPTITAI 302
SVNL A TF+AG S L SSV VPT TAI
Sbjct: 321 SVNLKAVTFMAGIS*TLKSSVIVPTNTAI 407
>gb|BP857535.1|BP857535 BP857535 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-33-O06 5',
mRNA sequence
Length = 374
Score = 231 bits (498), Expect = 3e-059
Identities = 98/122 (80%), Positives = 109/122 (89%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 9 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNK 188
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 189 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 368
Query: 429 LT 434
LT
Sbjct: 369 LT 374
Score = 99.1 bits (210), Expect(2) = 1e-026
Identities = 51/80 (63%), Positives = 54/80 (67%)
Frame = -1 / -2
Query: 433 VRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIES 254
V+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P MN T E
Sbjct: 373 VKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESER 194
Query: 253 GGRLVLLMKRRLRITALKLL 194
G L LLMK RITALKLL
Sbjct: 193 GALLTLLMKSLFRITALKLL 134
Score = 43.2 bits (88), Expect(2) = 1e-026
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 73 DLGAVLLVFLLLPPAIRSIPMA 8
>gb|BP844305.1|BP844305 BP844305 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-89-O21 5',
mRNA sequence
Length = 398
Score = 215 bits (465), Expect(2) = 7e-059
Identities = 93/119 (78%), Positives = 103/119 (86%)
Frame = +3 / +1
Query: 99 RNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVR 278
R ++ KRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ PLS+ RLV
Sbjct: 40 RVRRPKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVE 219
Query: 279 FMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALR 455
FM GK D+IAV+VGT+TDD R+ E+PAMKV A RFTE ARARI AGGECLTFDQLALR
Sbjct: 220 FMTGKDDKIAVLVGTITDDLRVHEIPAMKVTAWRFTERARARIEKAGGECLTFDQLALR 396
Score = 112 bits (239), Expect(2) = 5e-027
Identities = 57/88 (64%), Positives = 60/88 (68%)
Frame = -1 / -1
Query: 457 ARSASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMN 278
A ASWSKV+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P MN
Sbjct: 398 ALRASWSKVKHSPPAFSILALALSVNLQAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMN 219
Query: 277 LTRRRIESGGRLVLLMKRRLRITALKLL 194
T E G L LLMK RITALKLL
Sbjct: 218 STSLESERGALLTLLMKSLFRITALKLL 135
Score = 34.5 bits (69), Expect(2) = 7e-059
Identities = 12/17 (70%), Positives = 17/17 (100%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKR 119
AMGIDL+AGG++KKT++
Sbjct: 9 AMGIDLIAGGKSKKTQK 59
Score = 31.3 bits (62), Expect(2) = 5e-027
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -1 / -2
Query: 112 VFLLRPPATRSIPMA 68
VFLL PPA RSIPMA
Sbjct: 52 VFLLLPPAIRSIPMA 8
>ref|NM_130325.1| Arabidopsis thaliana structural constituent of ribosome AT2G47570
mRNA, complete cds
Length = 408
Score = 130 bits (279), Expect(2) = 2e-058
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = +3 / +1
Query: 231 MSKTNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARII 410
MSK N+ PLS+ RLVR+M+GK +IAVIVGTVTDD RI +VPA+ V ALRFTE+ARARI
Sbjct: 1 MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 180
Query: 411 NAGGECLTFDQLALRAPLGQNTVLL 485
AGGECLTFDQLAL P +L
Sbjct: 181 KAGGECLTFDQLALPCPTWSENTVL 255
Score = 118 bits (252), Expect(2) = 2e-058
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +3 / +1
Query: 468 QNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
+NTVLLRGPKN REAV+HFGPAPGVPHSHTKPYVR G+K E ARGRR SRGFKV*
Sbjct: 241 ENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV* 408
Score = 101 bits (215), Expect(2) = 4e-036
Identities = 52/76 (68%), Positives = 55/76 (72%)
Frame = -1 / -2
Query: 460 GARSASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSM 281
G AS SKVRHSPPAL ILALA+SVNL+A T AGTS IL SSVTVPTITAI FPSM
Sbjct: 230 GHGRAS*SKVRHSPPALWILALALSVNLNAVTVRAGTSSILTSSVTVPTITAIFPSFPSM 51
Query: 280 NLTRRRIESGGRLVLL 233
TRR +SG LL
Sbjct: 50 YRTRRERDSGALFTLL 3
Score = 73.0 bits (153), Expect(2) = 4e-036
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -1 / -2
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVF 470
RT GLVWL*GTPGAGPKC TAS FLGPLSRTVF
Sbjct: 344 RTYGLVWL*GTPGAGPKCFTASRVFLGPLSRTVF 243
>gb|BP812879.1|BP812879 BP812879 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-04-L08 5',
mRNA sequence
Length = 406
Score = 228 bits (492), Expect = 2e-058
Identities = 97/124 (78%), Positives = 107/124 (86%)
Frame = +3 / +3
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 30 RTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 209
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGG
Sbjct: 210 NKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGG 389
Query: 423 ECLT 434
ECLT
Sbjct: 390 ECLT 401
Score = 92.3 bits (195), Expect(2) = 4e-024
Identities = 48/83 (57%), Positives = 52/83 (62%)
Frame = -1 / -1
Query: 436 KVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIE 257
KV+HSPPA + ALA+SVNL A TF+AG S L SSV VPT TAI S P MN T E
Sbjct: 403 KVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRE 224
Query: 256 SGGRLVLLMKRRLRITALKLLFV 188
G L LLMK IT L LL V
Sbjct: 223 RGALLTLLMKSLFNITPLNLLLV 155
Score = 41.8 bits (85), Expect(2) = 4e-024
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 100 DFGAVLLVFLLLPPAIRSIPIVVR 29
>gb|BP586227.1|BP586227 BP586227 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-05-H23 3',
mRNA sequence
Length = 460
Score = 226 bits (489), Expect = 6e-058
Identities = 92/109 (84%), Positives = 102/109 (93%)
Frame = +3 / -2
Query: 309 VIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVLLR 488
++VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNTVLLR
Sbjct: 456 LLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLR 277
Query: 489 GPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
GPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 276 GPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 130
Score = 131 bits (281), Expect = 3e-029
Identities = 60/86 (69%), Positives = 65/86 (75%)
Frame = -1 / +2
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 194 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 373
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVPT 314
+SVNL A TF+AG S L SSV VPT
Sbjct: 374 LSVNLKAVTFMAGISCTLKSSVIVPT 451
>gb|BP798427.1|BP798427 BP798427 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-07-D19 5',
mRNA sequence
Length = 403
Score = 226 bits (488), Expect = 8e-058
Identities = 96/124 (77%), Positives = 107/124 (86%)
Frame = +3 / +2
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
RT MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK
Sbjct: 32 RTKMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKV 211
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
N+ PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARAR+ AGG
Sbjct: 212 NKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARMEKAGG 391
Query: 423 ECLT 434
ECLT
Sbjct: 392 ECLT 403
Score = 90.0 bits (190), Expect(2) = 3e-023
Identities = 47/82 (57%), Positives = 51/82 (62%)
Frame = -1 / -2
Query: 433 VRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIES 254
V+HSPPA + ALA+SVNL A TF+AG S L SSV VPT TAI S P MN T E
Sbjct: 402 VKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRER 223
Query: 253 GGRLVLLMKRRLRITALKLLFV 188
G L LLMK IT L LL V
Sbjct: 222 GALLTLLMKSLFNITPLNLLLV 157
Score = 40.9 bits (83), Expect(2) = 3e-023
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPPATRSIPMAVR 62
D GAV LVFLL PPA RSIP+ VR
Sbjct: 102 DFGAVLLVFLLLPPAIRSIPIFVR 31
>gb|BP796897.1|BP796897 BP796897 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-01-E12 5',
mRNA sequence
Length = 393
Score = 178 bits (383), Expect(2) = 1e-057
Identities = 76/98 (77%), Positives = 85/98 (86%)
Frame = +3 / +1
Query: 159 VKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDK 338
+KLYRFLVRR+ SNFNAVILKRLFMSK N+ PLS+ RLV FM GK D+IAV+VGT+TDD
Sbjct: 100 LKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDL 279
Query: 339 RISEVPAMKVCALRFTETARARIINAGGECLTFDQLAL 452
R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLAL
Sbjct: 280 RVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLAL 393
Score = 111 bits (238), Expect(2) = 2e-030
Identities = 56/85 (65%), Positives = 59/85 (69%)
Frame = -1 / -2
Query: 448 ASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTR 269
ASWSKV+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P MN T
Sbjct: 389 ASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTS 210
Query: 268 RRIESGGRLVLLMKRRLRITALKLL 194
E G L LLMK RITALKLL
Sbjct: 209 LESERGALLTLLMKSLFRITALKLL 135
Score = 68.0 bits (142), Expect(2) = 1e-057
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVK 164
AMGIDL+AGG++KKTKRTAPKSDDVYLKLL +
Sbjct: 9 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLAQ 104
Score = 43.2 bits (88), Expect(2) = 2e-030
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 73 DLGAVLLVFLLLPPAIRSIPMA 8
>gb|AV538046.1|AV538046 AV538046 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109e04F 3', mRNA sequence
Length = 560
Score = 225 bits (486), Expect = 1e-057
Identities = 92/107 (85%), Positives = 100/107 (93%)
Frame = +3 / -1
Query: 315 VGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVLLRGP 494
VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNTVLLRGP
Sbjct: 560 VGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP 381
Query: 495 KNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
KN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 380 KNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 240
Score = 129 bits (276), Expect = 1e-028
Identities = 59/85 (69%), Positives = 64/85 (75%)
Frame = -1 / +1
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 304 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 483
Query: 391 VSVNLSAQTFIAGTSLILLSSVTVP 317
+SVNL A TF+AG S L SSV VP
Sbjct: 484 LSVNLKAVTFMAGISCTLKSSVIVP 558
>gb|BP814189.1|BP814189 BP814189 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-34-O05 5',
mRNA sequence
Length = 394
Score = 225 bits (485), Expect = 2e-057
Identities = 95/121 (78%), Positives = 107/121 (88%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK N+
Sbjct: 9 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSKVNK 188
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARAR+ AGGEC
Sbjct: 189 APLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARLEKAGGEC 368
Query: 429 L 431
L
Sbjct: 369 L 371
Score = 95.5 bits (202), Expect(2) = 2e-025
Identities = 50/81 (61%), Positives = 53/81 (65%)
Frame = -1 / -1
Query: 436 KVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIE 257
K +HSPPA LALA+SVNL A TF+AG S L SSV VPT TAI S P MN T E
Sbjct: 376 KGKHSPPAFSSLALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESE 197
Query: 256 SGGRLVLLMKRRLRITALKLL 194
G L LLMK RITALKLL
Sbjct: 196 RGALLTLLMKSLFRITALKLL 134
Score = 43.2 bits (88), Expect(2) = 2e-025
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 73 DLGAVLLVFLLLPPAIRSIPMA 8
>gb|BP864195.1|BP864195 BP864195 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-69-H08 5',
mRNA sequence
Length = 371
Score = 224 bits (484), Expect = 3e-057
Identities = 95/121 (78%), Positives = 107/121 (88%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK N+
Sbjct: 9 AMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSKVNK 188
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV FM GK D++AV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 189 APLSLSRLVEFMTGKDDKMAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 368
Query: 429 L 431
L
Sbjct: 369 L 371
Score = 97.3 bits (206), Expect(2) = 5e-026
Identities = 50/79 (63%), Positives = 53/79 (67%)
Frame = -1 / -2
Query: 430 RHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESG 251
+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P MN T E G
Sbjct: 370 KHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESERG 191
Query: 250 GRLVLLMKRRLRITALKLL 194
L LLMK RITALKLL
Sbjct: 190 ALLTLLMKSLFRITALKLL 134
Score = 43.2 bits (88), Expect(2) = 5e-026
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV LVFLL PPA RSIPMA
Sbjct: 73 DLGAVLLVFLLLPPAIRSIPMA 8
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 121 bits (258), Expect(2) = 3e-056
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +3 / +1
Query: 297 DQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNT 476
D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNT
Sbjct: 1622353 DKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNT 1622532
Query: 477 VLL 485
V L
Sbjct: 1622533 VFL 1622541
Score = 120 bits (257), Expect(2) = 3e-056
Identities = 47/53 (88%), Positives = 52/53 (98%)
Frame = +3 / +1
Query: 477 VLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
VLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 1622623 VLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 1622781
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 121 bits (258), Expect(2) = 3e-056
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +3 / -2
Query: 297 DQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNT 476
D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNT
Sbjct: 1687010 DKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNT 1686831
Query: 477 VLL 485
V L
Sbjct: 1686830 VFL 1686822
Score = 120 bits (257), Expect(2) = 3e-056
Identities = 47/53 (88%), Positives = 52/53 (98%)
Frame = +3 / -2
Query: 477 VLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
VLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 1686740 VLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 1686582
>gb|AV543075.1|AV543075 AV543075 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ196h10F 3', mRNA sequence
Length = 449
Score = 221 bits (476), Expect = 3e-056
Identities = 90/105 (85%), Positives = 98/105 (93%)
Frame = +3 / -1
Query: 321 TVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVLLRGPKN 500
T+TDD R+ E+PAMKV ALRFTE ARARI AGGECLTFDQLALRAPLGQNTVLLRGPKN
Sbjct: 449 TITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN 270
Query: 501 AREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 269 SREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 135
Score = 124 bits (266), Expect = 3e-027
Identities = 57/82 (69%), Positives = 62/82 (75%)
Frame = -1 / +1
Query: 571 RT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALA 392
RT GL L GTPGAGPKC TAS FLGPL RTVF P+GA ASWSKV+HSPPA + ALA
Sbjct: 199 RTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALA 378
Query: 391 VSVNLSAQTFIAGTSLILLSSV 326
+SVNL A TF+AG S L SSV
Sbjct: 379 LSVNLKAVTFMAGISCTLKSSV 444
>gb|BP823019.1|BP823019 BP823019 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-63-K09 5',
mRNA sequence
Length = 377
Score = 219 bits (473), Expect = 9e-056
Identities = 93/121 (76%), Positives = 105/121 (86%)
Frame = +3 / +1
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDL+AGG++KK KRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK N+
Sbjct: 13 AMGIDLIAGGKSKKNKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSKVNK 192
Query: 249 PPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+ RLV M GK D++AV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGEC
Sbjct: 193 APLSLSRLVELMTGKDDKMAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 372
Query: 429 L 431
L
Sbjct: 373 L 375
Score = 97.3 bits (206), Expect(2) = 2e-025
Identities = 50/80 (62%), Positives = 54/80 (67%)
Frame = -1 / -1
Query: 433 VRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIES 254
V+HSPPA ILALA+SVNL A TF+AG S L SSV VPT TAI S P +N T E
Sbjct: 377 VKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVINSTSLESER 198
Query: 253 GGRLVLLMKRRLRITALKLL 194
G L LLMK RITALKLL
Sbjct: 197 GALLTLLMKSLFRITALKLL 138
Score = 40.9 bits (83), Expect(2) = 2e-025
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLRPPATRSIPMA 68
DLGAV L FLL PPA RSIPMA
Sbjct: 77 DLGAVLLFFLLLPPAIRSIPMA 12
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,369,386,904
Number of Sequences: 1013581
Number of extensions: 15895425
Number of successful extensions: 113600
Number of sequences better than 1.0e-020: 294
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 57861642190
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)