TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192701.2.2
(654 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome II... 144 4e-033
emb|CQ768534.1| Sequence 29 from Patent WO2004007712 144 4e-033
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 144 4e-033
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 144 4e-033
emb|X98255.1|ATGASA4 A.thaliana GASA4 gene 141 2e-032
emb|CQ768528.1| Sequence 23 from Patent WO2004007712 141 2e-032
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 141 2e-032
emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome ... 141 2e-032
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 141 2e-032
gb|AA040971.1|AA040971 24237 CD4-13 Arabidopsis thaliana cD... 140 3e-032
gb|AA041107.1|AA041107 24373 CD4-13 Arabidopsis thaliana cD... 140 3e-032
gb|AA042739.1|AA042739 24995 CD4-13 Arabidopsis thaliana cD... 140 3e-032
gb|AV789164.1|AV789164 AV789164 RAFL6 Arabidopsis thaliana ... 140 3e-032
gb|AV827687.1|AV827687 AV827687 RAFL9 Arabidopsis thaliana ... 140 3e-032
gb|AV828914.1|AV828914 AV828914 RAFL9 Arabidopsis thaliana ... 140 3e-032
gb|AV533248.1|AV533248 AV533248 Arabidopsis thaliana flower... 140 3e-032
gb|CK119066.1|CK119066 214j04.p1 AtM1 Arabidopsis thaliana ... 140 3e-032
gb|CB252164.1|CB252164 33-E012999-019-004-B09-T7R MPIZ-ADIS... 140 3e-032
gb|CB252166.1|CB252166 33-E012994-019-004-B09-SP6r MPIZ-ADI... 140 3e-032
gb|CB253683.1|CB253683 91-E010742-019-001-F24-T7R MPIZ-ADIS... 140 3e-032
gb|CB254813.1|CB254813 59-E010740-019-001-E20-T7R MPIZ-ADIS... 140 3e-032
gb|U15683.1|ATU15683 Arabidopsis thaliana gibberellin-regul... 140 3e-032
gb|AY057601.1| Arabidopsis thaliana AT5g15230/F8M21_120 mRN... 140 3e-032
emb|AX364097.1| Sequence 104 from Patent WO0208410 140 3e-032
emb|AX366182.1| Sequence 101 from Patent WO0208411 140 3e-032
gb|AF360199.1| Arabidopsis thaliana putative GASA4 protein ... 140 3e-032
emb|BX831643.1|CNS09ZMA Arabidopsis thaliana Full-length cD... 140 3e-032
emb|BX831662.1|CNS09ZRW Arabidopsis thaliana Full-length cD... 140 3e-032
emb|BX832325.1|CNS09ZTP Arabidopsis thaliana Full-length cD... 140 3e-032
ref|NM_121527.2| Arabidopsis thaliana GASA4 AT5G15230 (GASA... 140 3e-032
gb|AA040978.1|AA040978 24244 CD4-13 Arabidopsis thaliana cD... 140 4e-032
gb|AA042208.1|AA042208 24529 CD4-13 Arabidopsis thaliana cD... 140 4e-032
gb|AV803339.1|AV803339 AV803339 RAFL9 Arabidopsis thaliana ... 140 4e-032
gb|AV537779.1|AV537779 AV537779 Arabidopsis thaliana roots ... 140 4e-032
gb|AA040973.1|AA040973 24239 CD4-13 Arabidopsis thaliana cD... 139 8e-032
gb|AA728614.1|AA728614 33208 Lambda-PRL2 Arabidopsis thalia... 138 2e-031
gb|AY040048.1| Arabidopsis thaliana putative GASA4 protein ... 138 2e-031
gb|AA712285.1|AA712285 32013 Lambda-PRL2 Arabidopsis thalia... 137 3e-031
gb|CB254270.1|CB254270 75-E010932-019-003-E20-T7R MPIZ-ADIS... 137 4e-031
gb|CB254814.1|CB254814 59-E010741-019-001-F08-T7R MPIZ-ADIS... 137 4e-031
gb|AA041012.1|AA041012 24278 CD4-13 Arabidopsis thaliana cD... 136 8e-031
gb|AI996588.1|AI996588 701667558 A. thaliana, Columbia Col-... 136 8e-031
gb|AA041128.1|AA041128 24394 CD4-13 Arabidopsis thaliana cD... 135 1e-030
gb|AA042737.1|AA042737 24993 CD4-13 Arabidopsis thaliana cD... 133 4e-030
gb|AV564310.1|AV564310 AV564310 Arabidopsis thaliana green ... 132 1e-029
emb|AX507440.1| Sequence 2135 from Patent WO0216655 132 1e-029
gb|BT011599.1| Arabidopsis thaliana At1g74670 mRNA, complet... 132 1e-029
ref|NM_106125.2| Arabidopsis thaliana unknown protein AT1G7... 132 1e-029
gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BA... 130 4e-029
emb|CQ768510.1| Sequence 5 from Patent WO2004007712 130 4e-029
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 130 4e-029
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 130 4e-029
gb|AA597987.1|AA597987 29236 Lambda-PRL2 Arabidopsis thalia... 129 7e-029
gb|BX840626.1|BX840626 BX840626 Arabidopsis thaliana Siliqu... 129 7e-029
emb|BX842102.1|CNS09YAK Arabidopsis thaliana Full-length cD... 129 7e-029
emb|BX821278.1|CNS0A97T Arabidopsis thaliana Full-length cD... 129 7e-029
emb|BX821679.1|CNS0A97L Arabidopsis thaliana Full-length cD... 129 7e-029
gb|BT014937.1| Arabidopsis thaliana At2g30810 gene, complet... 129 7e-029
ref|NM_128634.2| Arabidopsis thaliana unknown protein AT2G3... 129 7e-029
gb|AV799000.1|AV799000 AV799000 RAFL9 Arabidopsis thaliana ... 129 9e-029
gb|CF652903.1|CF652903 83-L020578-066-004-E22-SP6P MPIZ-ADI... 128 2e-028
gb|U53221.1|ATU53221 Arabidopsis thaliana GASA5 mRNA, compl... 128 2e-028
gb|BT002786.1| Arabidopsis thaliana clone RAFL14-87-E24 (R2... 128 2e-028
gb|BT004355.1| Arabidopsis thaliana clone U20167 unknown pr... 128 2e-028
ref|NM_111158.2| Arabidopsis thaliana GASA5 AT3G02885 (GASA... 128 2e-028
gb|T76365.1|T76365 11143 Lambda-PRL2 Arabidopsis thaliana c... 127 3e-028
gb|BT015386.1| Arabidopsis thaliana At2g30810 gene, complet... 127 3e-028
gb|AI999528.1|AI999528 701556307 A. thaliana, Columbia Col-... 125 1e-027
gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome II... 125 1e-027
gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1... 125 1e-027
emb|CQ768518.1| Sequence 13 from Patent WO2004007712 125 1e-027
emb|CQ768522.1| Sequence 17 from Patent WO2004007712 125 1e-027
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 125 1e-027
gb|AA041125.1|AA041125 24391 CD4-13 Arabidopsis thaliana cD... 124 2e-027
gb|BP835858.1|BP835858 BP835858 RAFL19 Arabidopsis thaliana... 108 3e-027
gb|T43207.1|T43207 6470 Lambda-PRL2 Arabidopsis thaliana cD... 124 3e-027
gb|BP803621.1|BP803621 BP803621 RAFL14 Arabidopsis thaliana... 118 1e-026
gb|BP569655.1|BP569655 BP569655 RAFL14 Arabidopsis thaliana... 118 1e-025
gb|BP577859.1|BP577859 BP577859 RAFL14 Arabidopsis thaliana... 115 1e-024
gb|AU227201.1|AU227201 AU227201 RAFL14 Arabidopsis thaliana... 113 4e-024
gb|AI993388.1|AI993388 701496169 A. thaliana, Ohio State cl... 111 2e-023
gb|BP599522.1|BP599522 BP599522 RAFL16 Arabidopsis thaliana... 95 1e-021
gb|BP589906.1|BP589906 BP589906 RAFL15 Arabidopsis thaliana... 105 1e-021
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
complete sequence
Length = 87937
Score = 144 bits (308), Expect = 4e-033
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = +2 / -3
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC P+CG RCS TQY+K CL CNKCC KCLCVPPG YGNK CPCYNNWKTK GGPKCP
Sbjct: 84749 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 84570
Query: 437 * 439
*
Sbjct: 84569 * 84567
>emb|CQ768534.1| Sequence 29 from Patent WO2004007712
Length = 750
Score = 144 bits (308), Expect = 4e-033
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = +2 / +2
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC P+CG RCS TQY+K CL CNKCC KCLCVPPG YGNK CPCYNNWKTK GGPKCP
Sbjct: 452 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 631
Query: 437 * 439
*
Sbjct: 632 * 634
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 144 bits (308), Expect = 4e-033
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = +2 / -2
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC P+CG RCS TQY+K CL CNKCC KCLCVPPG YGNK CPCYNNWKTK GGPKCP
Sbjct: 3223556 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 3223377
Query: 437 * 439
*
Sbjct: 3223376 * 3223374
Score = 125 bits (268), Expect = 1e-027
Identities = 42/61 (68%), Positives = 47/61 (77%)
Frame = +2 / +3
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC+ KC RCS T ++K C+ C KCC KCLCVPPG +GNK CPCYNNWKTKEG PKCP
Sbjct: 633567 ECNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 633746
Query: 437 * 439
*
Sbjct: 633747 * 633749
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 144 bits (308), Expect = 4e-033
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = +2 / +3
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC P+CG RCS TQY+K CL CNKCC KCLCVPPG YGNK CPCYNNWKTK GGPKCP
Sbjct: 3146022 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 3146201
Query: 437 * 439
*
Sbjct: 3146202 * 3146204
Score = 125 bits (268), Expect = 1e-027
Identities = 42/61 (68%), Positives = 47/61 (77%)
Frame = +2 / -2
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC+ KC RCS T ++K C+ C KCC KCLCVPPG +GNK CPCYNNWKTKEG PKCP
Sbjct: 638512 ECNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 638333
Query: 437 * 439
*
Sbjct: 638332 * 638330
>emb|X98255.1|ATGASA4 A.thaliana GASA4 gene
Length = 2399
Score = 141 bits (303), Expect = 2e-032
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +2 / +1
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 1831 ECPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 2010
Query: 437 *K 442
*K
Sbjct: 2011 *K 2016
>emb|CQ768528.1| Sequence 23 from Patent WO2004007712
Length = 2009
Score = 141 bits (303), Expect = 2e-032
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +2 / +1
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 1327 ECPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 1506
Query: 437 *K 442
*K
Sbjct: 1507 *K 1512
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 141 bits (303), Expect = 2e-032
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +2 / +3
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 4728819 ECPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 4728998
Query: 437 *K 442
*K
Sbjct: 4728999 *K 4729004
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project)
Length = 103996
Score = 141 bits (303), Expect = 2e-032
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +2 / +3
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 49755 ECPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 49934
Query: 437 *K 442
*K
Sbjct: 49935 *K 49940
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 141 bits (303), Expect = 2e-032
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +2 / +1
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 4945846 ECPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 4946025
Query: 437 *K 442
*K
Sbjct: 4946026 *K 4946031
>gb|AA040971.1|AA040971 24237 CD4-13 Arabidopsis thaliana cDNA clone E10D8T7, mRNA sequence
Length = 588
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / -2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 338 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 159
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 158 GPKCP*K 138
>gb|AA041107.1|AA041107 24373 CD4-13 Arabidopsis thaliana cDNA clone E1G11T7, mRNA sequence
Length = 687
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 196 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 375
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 376 GPKCP*K 396
>gb|AA042739.1|AA042739 24995 CD4-13 Arabidopsis thaliana cDNA clone E8D10T7, mRNA sequence
Length = 636
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 197 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 376
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 377 GPKCP*K 397
>gb|AV789164.1|AV789164 AV789164 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-82-H18 3',
mRNA sequence
Length = 421
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / -3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 374 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 195
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 194 GPKCP*K 174
>gb|AV827687.1|AV827687 AV827687 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-18-F02 5',
mRNA sequence
Length = 626
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 239 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 418
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 419 GPKCP*K 439
>gb|AV828914.1|AV828914 AV828914 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-35-D01 5',
mRNA sequence
Length = 504
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 239 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 418
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 419 GPKCP*K 439
>gb|AV533248.1|AV533248 AV533248 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB058e03F 3', mRNA sequence
Length = 568
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / -3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 374 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 195
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 194 GPKCP*K 174
>gb|CK119066.1|CK119066 214j04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J04214
5-PRIME, mRNA sequence
Length = 594
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 39 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 218
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 219 GPKCP*K 239
>gb|CB252164.1|CB252164 33-E012999-019-004-B09-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768B094Q 5-PRIME, mRNA sequence
Length = 575
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 185 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 364
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 365 GPKCP*K 385
>gb|CB252166.1|CB252166 33-E012994-019-004-B09-SP6r MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768B094Q 3-PRIME, mRNA sequence
Length = 576
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / -2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 392 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 213
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 212 GPKCP*K 192
>gb|CB253683.1|CB253683 91-E010742-019-001-F24-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768F241Q 5-PRIME, mRNA sequence
Length = 643
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 253 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 432
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 433 GPKCP*K 453
>gb|CB254813.1|CB254813 59-E010740-019-001-E20-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768E201Q 5-PRIME, mRNA sequence
Length = 561
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 213 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 392
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 393 GPKCP*K 413
>gb|U15683.1|ATU15683 Arabidopsis thaliana gibberellin-regulated (GASA4) mRNA, complete
cds
Length = 613
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 238 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 417
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 418 GPKCP*K 438
>gb|AY057601.1| Arabidopsis thaliana AT5g15230/F8M21_120 mRNA, complete cds
Length = 649
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 238 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 417
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 418 GPKCP*K 438
>emb|AX364097.1| Sequence 104 from Patent WO0208410
Length = 1094
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / -3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 915 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 736
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 735 GPKCP*K 715
>emb|AX366182.1| Sequence 101 from Patent WO0208411
Length = 1094
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / -3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 915 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 736
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 735 GPKCP*K 715
>gb|AF360199.1| Arabidopsis thaliana putative GASA4 protein (At5g15230) mRNA,
complete cds
Length = 642
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 238 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 417
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 418 GPKCP*K 438
>emb|BX831643.1|CNS09ZMA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH20ZF02 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 599
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 223 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 402
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 403 GPKCP*K 423
>emb|BX831662.1|CNS09ZRW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH21ZG11 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 599
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 224 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 403
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 404 GPKCP*K 424
>emb|BX832325.1|CNS09ZTP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH65ZH08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 601
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 224 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 403
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 404 GPKCP*K 424
>ref|NM_121527.2| Arabidopsis thaliana GASA4 AT5G15230 (GASA4) mRNA, complete cds
Length = 626
Score = 140 bits (301), Expect = 3e-032
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 238 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 417
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 418 GPKCP*K 438
>gb|AA040978.1|AA040978 24244 CD4-13 Arabidopsis thaliana cDNA clone E10E4T7, mRNA sequence
Length = 591
Score = 140 bits (300), Expect = 4e-032
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +2 / -2
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
+C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 323 QCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 144
Query: 437 *K 442
*K
Sbjct: 143 *K 138
>gb|AA042208.1|AA042208 24529 CD4-13 Arabidopsis thaliana cDNA clone E4D10T7, mRNA sequence
Length = 587
Score = 140 bits (300), Expect = 4e-032
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +2 / -1
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
+C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 332 QCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 153
Query: 437 *K 442
*K
Sbjct: 152 *K 147
>gb|AV803339.1|AV803339 AV803339 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-35-D01 3',
mRNA sequence
Length = 383
Score = 140 bits (300), Expect = 4e-032
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +2 / -2
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
+C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 376 QCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 197
Query: 437 *K 442
*K
Sbjct: 196 *K 191
>gb|AV537779.1|AV537779 AV537779 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ103c11F 3', mRNA sequence
Length = 372
Score = 140 bits (300), Expect = 4e-032
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +2 / -2
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
+C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 362 QCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 183
Query: 437 *K 442
*K
Sbjct: 182 *K 177
>gb|AA040973.1|AA040973 24239 CD4-13 Arabidopsis thaliana cDNA clone E10E11T7, mRNA
sequence
Length = 572
Score = 139 bits (298), Expect = 8e-032
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +2 / -1
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
+C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP
Sbjct: 332 QCPSECVRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 153
Query: 437 *K 442
*K
Sbjct: 152 *K 147
>gb|AA728614.1|AA728614 33208 Lambda-PRL2 Arabidopsis thaliana cDNA clone 131I7T7, mRNA
sequence
Length = 466
Score = 138 bits (296), Expect = 2e-031
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +2 / +3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 126 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 305
Query: 422 GPKCP*K 442
GPKCP K
Sbjct: 306 GPKCPXK 326
>gb|AY040048.1| Arabidopsis thaliana putative GASA4 protein (At5g15230) mRNA,
complete cds
Length = 321
Score = 138 bits (296), Expect = 2e-031
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EG
Sbjct: 124 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEG 303
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 304 GPKCP* 321
>gb|AA712285.1|AA712285 32013 Lambda-PRL2 Arabidopsis thaliana cDNA clone 186K14T7, mRNA
sequence
Length = 491
Score = 137 bits (294), Expect = 3e-031
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YG K C CYNNWKT+EG
Sbjct: 122 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGXKQVCSCYNNWKTQEG 301
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 302 GPKCP*K 322
>gb|CB254270.1|CB254270 75-E010932-019-003-E20-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768E203Q 5-PRIME, mRNA sequence
Length = 264
Score = 137 bits (293), Expect = 4e-031
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVP G+YGNK C CYNNWKT+EG
Sbjct: 62 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPTGYYGNKQVCSCYNNWKTQEG 241
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 242 GPKCP*K 262
>gb|CB254814.1|CB254814 59-E010741-019-001-F08-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768F081Q 5-PRIME, mRNA sequence
Length = 488
Score = 137 bits (293), Expect = 4e-031
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +2 / +3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT++G
Sbjct: 213 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQDG 392
Query: 422 GPKCP*K 442
GPKCP K
Sbjct: 393 GPKCPRK 413
>gb|AA041012.1|AA041012 24278 CD4-13 Arabidopsis thaliana cDNA clone E10H8T7, mRNA sequence
Length = 507
Score = 136 bits (291), Expect = 8e-031
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = +2 / -2
Query: 269 KCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP*K 442
+C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKCP*K
Sbjct: 320 ECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP*K 147
>gb|AI996588.1|AI996588 701667558 A. thaliana, Columbia Col-0, root-1 Arabidopsis thaliana
cDNA clone 701667558, mRNA sequence
Length = 538
Score = 136 bits (291), Expect = 8e-031
Identities = 46/63 (73%), Positives = 49/63 (77%)
Frame = +2 / -2
Query: 254 WECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKC 433
W P RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNWKT+EGGPKC
Sbjct: 345 WTRKPXTYPRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKC 166
Query: 434 P*K 442
P*K
Sbjct: 165 P*K 157
>gb|AA041128.1|AA041128 24394 CD4-13 Arabidopsis thaliana cDNA clone E2A1T7, mRNA sequence
Length = 605
Score = 135 bits (290), Expect = 1e-030
Identities = 45/67 (67%), Positives = 51/67 (76%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C RC KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNW T+EG
Sbjct: 208 SLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWXTQEG 387
Query: 422 GPKCP*K 442
GPKCP K
Sbjct: 388 GPKCPXK 408
>gb|AA042737.1|AA042737 24993 CD4-13 Arabidopsis thaliana cDNA clone E8C8T7, mRNA sequence
Length = 567
Score = 133 bits (286), Expect = 4e-030
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L +C +C R KTQY KAC+T CNKCC KCLCVPPG+YGNK C CYNNW+T+EG
Sbjct: 176 SLKRTQCPSECDRRXKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWETQEG 355
Query: 422 GPKCP*K 442
GPKCP*K
Sbjct: 356 GPKCP*K 376
>gb|AV564310.1|AV564310 AV564310 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ202d11F 3', mRNA sequence
Length = 547
Score = 132 bits (282), Expect = 1e-029
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = +2 / -1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L ++C +C RCS T+Y K C+ C KCCAKCLCVPPG YGNK CPCYNNWKT++G
Sbjct: 454 SLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQG 275
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 274 GPKCP* 257
>emb|AX507440.1| Sequence 2135 from Patent WO0216655
Length = 243
Score = 132 bits (282), Expect = 1e-029
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L ++C +C RCS T+Y K C+ C KCCAKCLCVPPG YGNK CPCYNNWKT++G
Sbjct: 46 SLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQG 225
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 226 GPKCP* 243
>gb|BT011599.1| Arabidopsis thaliana At1g74670 mRNA, complete cds
Length = 575
Score = 132 bits (282), Expect = 1e-029
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = +2 / +3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L ++C +C RCS T+Y K C+ C KCCAKCLCVPPG YGNK CPCYNNWKT++G
Sbjct: 165 SLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQG 344
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 345 GPKCP* 362
>ref|NM_106125.2| Arabidopsis thaliana unknown protein AT1G74670 mRNA, complete cds
Length = 641
Score = 132 bits (282), Expect = 1e-029
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L ++C +C RCS T+Y K C+ C KCCAKCLCVPPG YGNK CPCYNNWKT++G
Sbjct: 188 SLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQG 367
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 368 GPKCP* 385
>gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M20 genomic sequence, complete
sequence
Length = 134402
Score = 130 bits (279), Expect = 4e-029
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = +2 / +3
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC +C RCS T+Y K C+ C KCCAKCLCVPPG YGNK CPCYNNWKT++GGPKCP
Sbjct: 110031 ECGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 110210
Query: 437 * 439
*
Sbjct: 110211 * 110213
>emb|CQ768510.1| Sequence 5 from Patent WO2004007712
Length = 1453
Score = 130 bits (279), Expect = 4e-029
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = +2 / +3
Query: 257 ECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP 436
EC +C RCS T+Y K C+ C KCCAKCLCVPPG YGNK CPCYNNWKT++GGPKCP
Sbjct: 771 ECGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 950
Query: 437 * 439
*
Sbjct: 951 * 953
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 859,628,031
Number of Sequences: 1013581
Number of extensions: 9189904
Number of successful extensions: 95761
Number of sequences better than 1.0e-020: 113
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 40051800270
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)