TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805013.2.1
(712 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA781634.1|CA781634 031C03AF Infected Arabidopsis Leaf A... 306 6e-082
gb|CB264955.1|CB264955 21-E014658-035-002-I05-T7R MPIZ-ADIS... 306 6e-082
gb|CK117754.1|CK117754 214d08.p1 AtM1 Arabidopsis thaliana ... 306 6e-082
gb|CK118317.1|CK118317 217d18.p1 AtM1 Arabidopsis thaliana ... 306 6e-082
gb|CK119288.1|CK119288 218g08.p1 AtM1 Arabidopsis thaliana ... 306 6e-082
gb|CK121078.1|CK121078 204k20.p1 AtM1 Arabidopsis thaliana ... 306 6e-082
gb|CB254173.1|CB254173 77-E010699-019-002-J20-T7R MPIZ-ADIS... 306 6e-082
gb|BP796311.1|BP796311 BP796311 RAFL5 Arabidopsis thaliana ... 306 6e-082
gb|AY065157.1| Arabidopsis thaliana unknown protein (At1g02... 306 6e-082
gb|AY114602.1| Arabidopsis thaliana unknown protein (At1g02... 306 6e-082
gb|AY087464.1| Arabidopsis thaliana clone 35733 mRNA, compl... 306 6e-082
ref|NM_100094.1| Arabidopsis thaliana unknown protein AT1G0... 306 6e-082
gb|AV536222.1|AV536222 AV536222 Arabidopsis thaliana liquid... 278 8e-077
gb|U89959.1| Arabidopsis thaliana BAC T7I23, complete sequence 139 3e-068
gb|BE520975.1|BE520975 M16A5STM Arabidopsis developing seed... 255 1e-066
gb|AV784983.1|AV784983 AV784983 RAFL6 Arabidopsis thaliana ... 253 6e-066
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 139 5e-064
gb|AI992789.1|AI992789 701493549 A. thaliana, Ohio State cl... 238 2e-061
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 139 8e-060
gb|AV823903.1|AV823903 AV823903 RAFL6 Arabidopsis thaliana ... 216 6e-057
gb|BP853815.1|BP853815 BP853815 RAFL21 Arabidopsis thaliana... 168 2e-049
gb|BP851679.1|BP851679 BP851679 RAFL21 Arabidopsis thaliana... 145 3e-049
gb|BP840813.1|BP840813 BP840813 RAFL19 Arabidopsis thaliana... 167 2e-047
gb|T45171.1|T45171 8434 Lambda-PRL2 Arabidopsis thaliana cD... 155 1e-036
emb|AX461349.1| Sequence 278 from Patent WO0198480 131 3e-036
gb|BE526683.1|BE526683 M66I19STM Arabidopsis developing see... 149 1e-034
gb|AV536260.1|AV536260 AV536260 Arabidopsis thaliana liquid... 145 2e-033
gb|CW843485.1|CW843485 ET13840.Ds5.08.25.2004.jx83.631 Arab... 139 9e-032
gb|AV809737.1|AV809737 AV809737 RAFL9 Arabidopsis thaliana ... 133 8e-030
gb|AV789063.1|AV789063 AV789063 RAFL6 Arabidopsis thaliana ... 129 7e-029
gb|AV806021.1|AV806021 AV806021 RAFL9 Arabidopsis thaliana ... 126 9e-028
gb|AV536897.1|AV536897 AV536897 Arabidopsis thaliana liquid... 96 3e-022
>gb|CA781634.1|CA781634 031C03AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 542
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 12 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 191
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 192 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 371
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 372 LVQDLKCLVFSLISLHFKIKPI 437
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -2
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 436 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 257
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 256 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 77
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 76 NSNSRNSCPNFPL*PT*YLR*N 11
>gb|CB264955.1|CB264955 21-E014658-035-002-I05-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000I052Q 5-PRIME, mRNA sequence
Length = 552
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 47 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 226
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 227 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 406
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 407 LVQDLKCLVFSLISLHFKIKPI 472
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -1
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 471 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 292
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 291 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 112
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 111 NSNSRNSCPNFPL*PT*YLR*N 46
>gb|CK117754.1|CK117754 214d08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D08214
5-PRIME, mRNA sequence
Length = 634
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 60 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 239
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 240 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 419
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 420 LVQDLKCLVFSLISLHFKIKPI 485
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -1
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 484 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 305
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 304 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 125
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 124 NSNSRNSCPNFPL*PT*YLR*N 59
>gb|CK118317.1|CK118317 217d18.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D18217
5-PRIME, mRNA sequence
Length = 606
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 39 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 218
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 219 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 398
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 399 LVQDLKCLVFSLISLHFKIKPI 464
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -3
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 463 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 284
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 283 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 104
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 103 NSNSRNSCPNFPL*PT*YLR*N 38
>gb|CK119288.1|CK119288 218g08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011G08218
5-PRIME, mRNA sequence
Length = 711
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 12 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 191
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 192 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 371
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 372 LVQDLKCLVFSLISLHFKIKPI 437
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -3
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 436 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 257
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 256 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 77
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 76 NSNSRNSCPNFPL*PT*YLR*N 11
>gb|CK121078.1|CK121078 204k20.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011K20204
5-PRIME, mRNA sequence
Length = 726
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 39 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 218
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 219 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 398
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 399 LVQDLKCLVFSLISLHFKIKPI 464
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -3
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 463 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 284
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 283 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 104
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 103 NSNSRNSCPNFPL*PT*YLR*N 38
>gb|CB254173.1|CB254173 77-E010699-019-002-J20-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768J202Q 5-PRIME, mRNA sequence
Length = 581
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +1
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 40 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 219
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 220 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 399
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 400 LVQDLKCLVFSLISLHFKIKPI 465
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -1
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 464 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 285
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 284 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 105
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 104 NSNSRNSCPNFPL*PT*YLR*N 39
>gb|BP796311.1|BP796311 BP796311 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-02-J15 5',
mRNA sequence
Length = 640
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 63 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 242
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 243 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 422
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 423 LVQDLKCLVFSLISLHFKIKPI 488
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -1
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 487 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 308
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 307 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 128
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 127 NSNSRNSCPNFPL*PT*YLR*N 62
>gb|AY065157.1| Arabidopsis thaliana unknown protein (At1g02140; T7I23.7) mRNA,
complete cds
Length = 743
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 63 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 242
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 243 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 422
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 423 LVQDLKCLVFSLISLHFKIKPI 488
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -2
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 487 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 308
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 307 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 128
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 127 NSNSRNSCPNFPL*PT*YLR*N 62
>gb|AY114602.1| Arabidopsis thaliana unknown protein (At1g02140) mRNA, complete cds
Length = 643
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +1
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 25 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 204
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 205 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 384
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 385 LVQDLKCLVFSLISLHFKIKPI 450
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -3
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 449 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 270
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 269 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 90
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 89 NSNSRNSCPNFPL*PT*YLR*N 24
>gb|AY087464.1| Arabidopsis thaliana clone 35733 mRNA, complete sequence
Length = 764
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 63 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 242
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 243 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 422
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 423 LVQDLKCLVFSLISLHFKIKPI 488
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -2
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 487 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 308
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 307 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 128
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 127 NSNSRNSCPNFPL*PT*YLR*N 62
>ref|NM_100094.1| Arabidopsis thaliana unknown protein AT1G02140 mRNA, complete cds
Length = 763
Score = 306 bits (662), Expect = 6e-082
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 63 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 242
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 243 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 422
Query: 433 LVQDLKCFVFSLINLHFKIKPI 498
LVQDLKC VFSLI+LHFKIKPI
Sbjct: 423 LVQDLKCLVFSLISLHFKIKPI 488
Score = 181 bits (390), Expect = 2e-044
Identities = 93/142 (65%), Positives = 102/142 (71%)
Frame = -3 / -1
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 487 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 308
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 307 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSL 128
Query: 137 SSNSRNSCPNLPLCPT**RR*N 72
+SNSRNSCPN PL PT* R*N
Sbjct: 127 NSNSRNSCPNFPL*PT*YLR*N 62
>gb|AV536222.1|AV536222 AV536222 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0610F 3', mRNA
sequence
Length = 568
Score = 278 bits (602), Expect(2) = 8e-077
Identities = 108/130 (83%), Positives = 121/130 (93%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKE F++P+VL+E +RI+
Sbjct: 113 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEAFLTPAVLKECKRIV 292
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYY
Sbjct: 293 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYY 472
Query: 433 LVQDLKCFVF 462
LVQDLKC VF
Sbjct: 473 LVQDLKCLVF 502
Score = 162 bits (348), Expect(2) = 3e-040
Identities = 82/132 (62%), Positives = 93/132 (70%)
Frame = -3 / -2
Query: 467 SENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQ 288
++ T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS P RSGSGQ
Sbjct: 507 AKKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSSCFPTRSGSGQ 328
Query: 287 LLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNSCPN 108
LLSSSF +S S I L S T G SLRI+VSF LPS +SNSRNSCPN
Sbjct: 327 LLSSSFRISLSETIRLHSLSTAGVRNASLRIIVSFL*LELLA*RSLPSSLNSNSRNSCPN 148
Query: 107 LPLCPT**RR*N 72
PL PT* R*N
Sbjct: 147 FPL*PT*YLR*N 112
Score = 31.3 bits (62), Expect(2) = 8e-077
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 460 FSLINLHFKIKPI 498
FSLI+LHFKIKPI
Sbjct: 501 FSLISLHFKIKPI 539
Score = 25.4 bits (49), Expect(2) = 3e-040
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 497 IGLILK*RLMSENTKHFR 444
IGLILK R MSE K F+
Sbjct: 538 IGLILKCREMSEKNKTFQ 485
>gb|U89959.1| Arabidopsis thaliana BAC T7I23, complete sequence
Length = 106973
Score = 139 bits (298), Expect(3) = 3e-068
Identities = 52/66 (78%), Positives = 62/66 (93%)
Frame = +1 / -3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 54765 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 54586
Query: 253 QESDIM 270
ES+++
Sbjct: 54585 SESEVL 54568
Score = 131 bits (280), Expect(3) = 3e-068
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / -1
Query: 265 IMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQD 444
I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQ
Sbjct: 54335 ILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQV 54156
Query: 445 LKCFV 459
F+
Sbjct: 54155 SSLFL 54141
Score = 97.7 bits (207), Expect(3) = 3e-030
Identities = 44/56 (78%), Positives = 48/56 (85%)
Frame = -3 / +1
Query: 437 TR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSF 270
TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS P RSGSGQLLSSSF
Sbjct: 54163 TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSSCFPTRSGSGQLLSSSF 54330
Score = 58.3 bits (121), Expect(3) = 3e-030
Identities = 33/59 (55%), Positives = 35/59 (59%)
Frame = -3 / +2
Query: 248 ILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNSCPNLPLCPT**RR*N 72
I L S T G TSLRI+VSF LPS +SNSRNSCPN PL PT* R*N
Sbjct: 54590 IRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSLNSNSRNSCPNFPL*PT*YLR*N 54766
Score = 46.9 bits (96), Expect(3) = 3e-068
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1 / -2
Query: 436 VQDLKCFVFSLINLHFKIKPI 498
+QDLKC VFSLI+LHFKIKPI
Sbjct: 53920 LQDLKCLVFSLISLHFKIKPI 53858
Score = 33.1 bits (66), Expect(3) = 3e-030
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -3 / +3
Query: 497 IGLILK*RLMSENTKHFRS 441
IGLILK R MSE T+HF+S
Sbjct: 53859 IGLILKCREMSEKTRHFKS 53915
>gb|BE520975.1|BE520975 M16A5STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M16A5 5', mRNA sequence
Length = 365
Score = 255 bits (551), Expect = 1e-066
Identities = 99/120 (82%), Positives = 112/120 (93%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 5 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 184
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPE LRIFYY
Sbjct: 185 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPERLRIFYY 364
Score = 144 bits (308), Expect = 4e-033
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -3 / -3
Query: 431 **KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSW 252
**K+R SGSLL W STR+PIL+V NE+CSLP TISSS P RSGSGQLLSSSF +S S
Sbjct: 363 **KMRSLSGSLLLWQSTRDPILDVANEICSLPKTISSSCFPTRSGSGQLLSSSFRISLSE 184
Query: 251 MILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNSCPNLPLCPT**RR*N 72
I L S T G TSLRI+VSF LPS +SNSRNSCPN PL PT* R*N
Sbjct: 183 TIRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSLNSNSRNSCPNFPL*PT*YLR*N 4
>gb|AV784983.1|AV784983 AV784983 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-10-C17 3',
mRNA sequence
Length = 627
Score = 253 bits (546), Expect = 6e-066
Identities = 100/123 (81%), Positives = 114/123 (92%)
Frame = +1 / -3
Query: 130 FELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRI 309
FE R DGKLRYAN SNYKNDT+IRKEVF++P+VL+E +RI+ ES+I+KEDD+NWPEPDR+
Sbjct: 625 FEFREDGKLRYANTSNYKNDTIIRKEVFLTPAVLKECKRIVSESEILKEDDNNWPEPDRV 446
Query: 310 GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKI 489
G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQDLKC VFSLI+LHFKI
Sbjct: 445 GKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQDLKCLVFSLISLHFKI 266
Query: 490 KPI 498
KPI
Sbjct: 265 KPI 257
Score = 150 bits (323), Expect = 3e-035
Identities = 78/123 (63%), Positives = 87/123 (70%)
Frame = -3 / +3
Query: 497 IGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 318
IGLILK R MSE T+HF+S TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS
Sbjct: 258 IGLILKCREMSEKTRHFKS*TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSS 437
Query: 317 WRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 138
P RSGSGQLLSSSF +S S I L S T G TSLRI+VSF LPS
Sbjct: 438 CFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSLRIIVSFL*LEVLA*RSLPSSL 617
Query: 137 SSN 129
+SN
Sbjct: 618 NSN 626
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 139 bits (298), Expect(3) = 5e-064
Identities = 52/66 (78%), Positives = 62/66 (93%)
Frame = +1 / -3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 404437 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 404258
Query: 253 QESDIM 270
ES+++
Sbjct: 404257 SESEVL 404240
Score = 131 bits (280), Expect(3) = 5e-064
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / -1
Query: 265 IMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQD 444
I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQ
Sbjct: 404007 ILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQV 403828
Query: 445 LKCFV 459
F+
Sbjct: 403827 SSLFL 403813
Score = 97.7 bits (207), Expect(3) = 4e-026
Identities = 44/56 (78%), Positives = 48/56 (85%)
Frame = -3 / +2
Query: 437 TR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSF 270
TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS P RSGSGQLLSSSF
Sbjct: 403835 TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSSCFPTRSGSGQLLSSSF 404002
Score = 58.3 bits (121), Expect(3) = 4e-026
Identities = 33/59 (55%), Positives = 35/59 (59%)
Frame = -3 / +3
Query: 248 ILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNSCPNLPLCPT**RR*N 72
I L S T G TSLRI+VSF LPS +SNSRNSCPN PL PT* R*N
Sbjct: 404262 IRLHSLSTAGVRNTSLRIIVSFL*LELLA*RSLPSSLNSNSRNSCPNFPL*PT*YLR*N 404438
Score = 46.9 bits (96), Expect(3) = 5e-064
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1 / -2
Query: 436 VQDLKCFVFSLINLHFKIKPI 498
+QDLKC VFSLI+LHFKIKPI
Sbjct: 403592 LQDLKCLVFSLISLHFKIKPI 403530
Score = 33.1 bits (66), Expect(3) = 4e-026
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -3 / +1
Query: 497 IGLILK*RLMSENTKHFRS 441
IGLILK R MSE T+HF+S
Sbjct: 403531 IGLILKCREMSEKTRHFKS 403587
>gb|AI992789.1|AI992789 701493549 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701493549, mRNA sequence
Length = 498
Score = 238 bits (514), Expect = 2e-061
Identities = 98/138 (71%), Positives = 113/138 (81%)
Frame = +1 / +1
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKN T+IRKEVF++P+VL+E +RI
Sbjct: 43 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNATIIRKEVFLTPAVLKECKRIG 222
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
+S+I+ E DSNWPEP R+G+QELEI +GNEHISF SK G V Q SKDP GLRIFYY
Sbjct: 223 SDSEILTEADSNWPEPARVGQQELEIDLGNEHISFAASKTGPHVACQRSKDPGGLRIFYY 402
Query: 433 LVQDLKCFVFSLINLHFK 486
LVQDL +LI+ HF+
Sbjct: 403 LVQDL*WHDLALISQHFR 456
Score = 140 bits (301), Expect = 4e-032
Identities = 74/133 (55%), Positives = 87/133 (65%)
Frame = -3 / -2
Query: 470 MSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSG 291
MS + H RS TR**K+R P GSLL W +T P+L+ NE+CSLP +ISSS P R+GSG
Sbjct: 440 MSAKSCHHRS*TR**KMRSPPGSLLRWQAT*GPVLDAANEICSLPKSISSSCWPTRAGSG 261
Query: 290 QLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNSCP 111
QLLS+S +S S I L S T G TSLRI+V+F LPS +SNSRNSCP
Sbjct: 260 QLLSASVRISLSEPIRLHSLSTAGVRNTSLRIIVAFL*LELLA*RSLPSSLNSNSRNSCP 81
Query: 110 NLPLCPT**RR*N 72
N PL PT* R*N
Sbjct: 80 NFPL*PT*YLR*N 42
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 139 bits (298), Expect(2) = 8e-060
Identities = 52/66 (78%), Positives = 62/66 (93%)
Frame = +1 / -2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 404377 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 404198
Query: 253 QESDIM 270
ES+++
Sbjct: 404197 SESEVL 404180
Score = 131 bits (280), Expect(2) = 8e-060
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / -3
Query: 265 IMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQD 444
I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQ
Sbjct: 403947 ILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQV 403768
Query: 445 LKCFV 459
F+
Sbjct: 403767 SSLFL 403753
>gb|AV823903.1|AV823903 AV823903 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-10-C17 5',
mRNA sequence
Length = 414
Score = 216 bits (467), Expect(2) = 6e-057
Identities = 83/103 (80%), Positives = 96/103 (93%)
Frame = +1 / +1
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 64 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 243
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSL 381
ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TS GSL
Sbjct: 244 SESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSXNGSL 372
Score = 120 bits (257), Expect = 4e-026
Identities = 63/103 (61%), Positives = 69/103 (66%)
Frame = -3 / -2
Query: 380 REPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSL 201
R+P L+V NE+CSLP TISSS P RSGSGQLLSSSF +S S I L S T G TSL
Sbjct: 371 RDPXLDVANEICSLPKTISSSCFPTRSGSGQLLSSSFRISLSETIRLHSLSTAGVRNTSL 192
Query: 200 RIMVSFXXXXXXXXXXLPSGRSSNSRNSCPNLPLCPT**RR*N 72
RI+VSF LPS +SNSRNSCPN PL PT* R*N
Sbjct: 191 RIIVSFL*LELLA*RSLPSSLNSNSRNSCPNFPL*PT*YLR*N 63
Score = 26.7 bits (52), Expect(2) = 6e-057
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 379 LVDVQSSKDPEGL 417
LVD QSS DPEGL
Sbjct: 371 LVDWQSSNDPEGL 409
>gb|BP853815.1|BP853815 BP853815 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-I10 5',
mRNA sequence
Length = 398
Score = 168 bits (361), Expect(2) = 2e-049
Identities = 65/85 (76%), Positives = 78/85 (91%)
Frame = +1 / +2
Query: 160 YANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMG 339
YANNSNYK DT+IRKEVF++P+VL+E +RI+ ES+I+KEDD+NW EPDR+G+QELEIV+G
Sbjct: 143 YANNSNYKKDTIIRKEVFLTPAVLKECKRIVSESEILKEDDNNWAEPDRVGKQELEIVLG 322
Query: 340 NEHISFTTSKIGSLVDVQSSKDPEG 414
NEHISF TSKIGSLVD QSS DPEG
Sbjct: 323 NEHISFATSKIGSLVDCQSSNDPEG 397
Score = 107 bits (228), Expect(2) = 3e-025
Identities = 52/77 (67%), Positives = 57/77 (74%)
Frame = -3 / -3
Query: 413 PSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLAS 234
PSGSLL W STR+PIL+V NE+CSLP TISSS P RSGS QLLSSSF +S S I L S
Sbjct: 396 PSGSLLLWQSTRDPILDVANEICSLPKTISSSCFPTRSGSAQLLSSSFRISLSETIRLHS 217
Query: 233 RRTEGETKTSLRIMVSF 183
T G TSLRI+VSF
Sbjct: 216 LSTAGVRNTSLRIIVSF 166
Score = 50.6 bits (104), Expect(2) = 2e-049
Identities = 20/29 (68%), Positives = 20/29 (68%)
Frame = +1 / +1
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLR 159
FYLRYYVGHKGKFGHEF L LR
Sbjct: 55 FYLRYYVGHKGKFGHEFWSSSLERTVSLR 141
Score = 29.9 bits (59), Expect(2) = 3e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / -1
Query: 125 RNSCPNLPLCPT**RR*N 72
+NSCPN PL PT* R*N
Sbjct: 107 QNSCPNFPL*PT*YLR*N 54
>gb|BP851679.1|BP851679 BP851679 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-D10 5',
mRNA sequence
Length = 394
Score = 145 bits (311), Expect(3) = 3e-049
Identities = 56/73 (76%), Positives = 69/73 (94%)
Frame = +1 / +1
Query: 181 KNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFT 360
KNDT+IRKEVF++P+VL+E +RI+ ES+I+KEDD+NWPEPDR+G+QELEIV+GNEHISF
Sbjct: 172 KNDTIIRKEVFLTPAVLKECKRIVSESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFA 351
Query: 361 TSKIGSLVDVQSS 399
TSKIGSLVD QSS
Sbjct: 352 TSKIGSLVDCQSS 390
Score = 100 bits (213), Expect(2) = 2e-022
Identities = 49/73 (67%), Positives = 54/73 (73%)
Frame = -3 / -3
Query: 401 LLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTE 222
LL W STR+PIL+V NE+CSLP TISSS P RSGSGQLLSSSF +S S I L S T
Sbjct: 392 LLLWQSTRDPILDVANEICSLPKTISSSCFPTRSGSGQLLSSSFRISLSETIRLHSLSTA 213
Query: 221 GETKTSLRIMVSF 183
G TSLRI+VSF
Sbjct: 212 GVRNTSLRIIVSF 174
Score = 46.4 bits (95), Expect(3) = 3e-049
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1 / +1
Query: 73 FYLRYYVGHKGKFGHE 120
FYLRYYVGHKGKFGHE
Sbjct: 64 FYLRYYVGHKGKFGHE 111
Score = 44.6 bits (91), Expect(3) = 3e-049
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1 / +3
Query: 124 LEFELRPDGKLRYANNSNYK 183
LEFE R DGKLRYANNSNY+
Sbjct: 114 LEFEFREDGKLRYANNSNYQ 173
Score = 27.6 bits (54), Expect(2) = 2e-022
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / -3
Query: 125 RNSCPNLPLCPT**RR*N 72
++SCPN PL PT* R*N
Sbjct: 116 QDSCPNFPL*PT*YLR*N 63
>gb|BP840813.1|BP840813 BP840813 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-31-E22 5',
mRNA sequence
Length = 403
Score = 167 bits (359), Expect(2) = 2e-047
Identities = 64/81 (79%), Positives = 77/81 (95%)
Frame = +1 / +1
Query: 139 RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQ 318
R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+ ES+I+KEDD+NWPEPDR+G+Q
Sbjct: 154 REDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIVSESEILKEDDNNWPEPDRVGKQ 333
Query: 319 ELEIVMGNEHISFTTSKIGSL 381
ELEIV+GNEHISF TSKIGSL
Sbjct: 334 ELEIVLGNEHISFATSKIGSL 396
Score = 44.1 bits (90), Expect(2) = 2e-047
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGH 117
FYLRYYVGHKGKFGH
Sbjct: 86 FYLRYYVGHKGKFGH 130
>gb|T45171.1|T45171 8434 Lambda-PRL2 Arabidopsis thaliana cDNA clone 80B1T7, mRNA
sequence
Length = 385
Score = 155 bits (333), Expect = 1e-036
Identities = 59/81 (72%), Positives = 68/81 (83%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKL YANNSNYK DT+IRKEVF++P VL+E +RI
Sbjct: 44 FYLRYYVGHKGKFGHEFLEFEFREDGKLXYANNSNYKXDTIIRKEVFLTPDVLKECKRIX 223
Query: 253 QESDIMKEDDSNWPEPDRIGR 315
S+I+ D+NWPEPDR G+
Sbjct: 224 SXSEILXXXDNNWPEPDRXGK 286
>emb|AX461349.1| Sequence 278 from Patent WO0198480
Length = 2006
Score = 131 bits (280), Expect(2) = 3e-036
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / +1
Query: 265 IMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQD 444
I+KEDD+NWPEPDR+G+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQ
Sbjct: 10 ILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQV 189
Query: 445 LKCFV 459
F+
Sbjct: 190 SSLFL 204
Score = 97.7 bits (207), Expect(2) = 3e-022
Identities = 44/56 (78%), Positives = 48/56 (85%)
Frame = -3 / -1
Query: 437 TR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSF 270
TR**K+R PSGSLL W STR+PIL+V NE+CSLP TISSS P RSGSGQLLSSSF
Sbjct: 182 TR**KMRSPSGSLLLWQSTRDPILDVANEICSLPKTISSSCFPTRSGSGQLLSSSF 15
Score = 46.9 bits (96), Expect(2) = 3e-036
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 436 VQDLKCFVFSLINLHFKIKPI 498
+QDLKC VFSLI+LHFKIKPI
Sbjct: 425 LQDLKCLVFSLISLHFKIKPI 487
Score = 33.1 bits (66), Expect(2) = 3e-022
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -3 / -3
Query: 497 IGLILK*RLMSENTKHFRS 441
IGLILK R MSE T+HF+S
Sbjct: 486 IGLILKCREMSEKTRHFKS 430
>gb|BE526683.1|BE526683 M66I19STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600035377R1 5', mRNA sequence
Length = 248
Score = 149 bits (319), Expect = 1e-034
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +1 / +2
Query: 145 DGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQEL 324
DGK RY NNSNYKN T+IR EVF++P+VL+E +RI+ ES+I+KEDD+NWPEPDR+G+QEL
Sbjct: 5 DGKXRYXNNSNYKNXTIIRXEVFLTPAVLKECKRIVSESEILKEDDNNWPEPDRVGKQEL 184
Query: 325 EIVMGNEHISFTTSKIGSLVD 387
EI +GN HIS TSKIGSL D
Sbjct: 185 EIGLGNXHISXATSKIGSLAD 247
>gb|AV536260.1|AV536260 AV536260 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0670F 3', mRNA
sequence
Length = 319
Score = 145 bits (311), Expect = 2e-033
Identities = 55/69 (79%), Positives = 64/69 (92%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKE F++P+VL+E +RI+
Sbjct: 113 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEAFLTPAVLKECKRIV 292
Query: 253 QESDIMKED 279
ES+I+KED
Sbjct: 293 SESEILKED 319
>gb|CW843485.1|CW843485 ET13840.Ds5.08.25.2004.jx83.631 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET13840, DNA sequence
Length = 631
Score = 139 bits (298), Expect = 9e-032
Identities = 52/66 (78%), Positives = 62/66 (93%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE R DGKLRYANNSNYKNDT+IRKEVF++P+VL+E +RI+
Sbjct: 386 FYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIV 565
Query: 253 QESDIM 270
ES+++
Sbjct: 566 SESEVL 583
>gb|AV809737.1|AV809737 AV809737 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-61-B12 3',
mRNA sequence
Length = 431
Score = 133 bits (284), Expect = 8e-030
Identities = 55/62 (88%), Positives = 58/62 (93%)
Frame = +1 / -2
Query: 313 RQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIK 492
+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQDLKC VFSLI+LHFKIK
Sbjct: 400 KQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQDLKCLVFSLISLHFKIK 221
Query: 493 PI 498
PI
Sbjct: 220 PI 215
>gb|AV789063.1|AV789063 AV789063 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-82-B05 3',
mRNA sequence
Length = 418
Score = 129 bits (277), Expect = 7e-029
Identities = 54/60 (90%), Positives = 56/60 (93%)
Frame = +1 / -3
Query: 319 ELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 498
ELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQDLKC VFSLI+LHFKIKPI
Sbjct: 416 ELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQDLKCLVFSLISLHFKIKPI 237
>gb|AV806021.1|AV806021 AV806021 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-45-B13 3',
mRNA sequence
Length = 413
Score = 126 bits (269), Expect = 9e-028
Identities = 52/59 (88%), Positives = 55/59 (93%)
Frame = +1 / -2
Query: 322 LEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 498
LEI++GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQDLKC VFSLI+LHFKIKPI
Sbjct: 412 LEILLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQDLKCLVFSLISLHFKIKPI 236
>gb|AV536897.1|AV536897 AV536897 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0670R 5', mRNA
sequence
Length = 427
Score = 95.9 bits (203), Expect(2) = 3e-022
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = +1 / -3
Query: 331 VMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVF 462
V+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQDLKC VF
Sbjct: 425 VLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQDLKCLVF 294
Score = 31.3 bits (62), Expect(2) = 3e-022
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / -1
Query: 460 FSLINLHFKIKPI 498
FSLI+LHFKIKPI
Sbjct: 295 FSLISLHFKIKPI 257
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,025,669,635
Number of Sequences: 1013581
Number of extensions: 11581868
Number of successful extensions: 94023
Number of sequences better than 1.0e-020: 39
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 44319555720
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)