TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804944.2.4
(667 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV544917.1|AV544917 AV544917 Arabidopsis thaliana roots ... 208 1e-052
gb|AV563704.1|AV563704 AV563704 Arabidopsis thaliana green ... 208 1e-052
gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX... 208 1e-052
gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R5... 208 1e-052
gb|BT006111.1| Arabidopsis thaliana clone U50150 putative c... 208 1e-052
emb|BX833432.1|CNS09Z0L Arabidopsis thaliana Full-length cD... 208 1e-052
dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosom... 208 1e-052
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 208 1e-052
ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNT... 208 1e-052
ref|NM_123771.3| Arabidopsis thaliana unknown protein AT5G4... 208 1e-052
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 208 1e-052
gb|AU227892.1|AU227892 AU227892 RAFL15 Arabidopsis thaliana... 203 4e-051
gb|AV557902.1|AV557902 AV557902 Arabidopsis thaliana green ... 203 4e-051
gb|AV560162.1|AV560162 AV560162 Arabidopsis thaliana green ... 199 5e-050
gb|AV566035.1|AV566035 AV566035 Arabidopsis thaliana green ... 199 5e-050
gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synth... 199 5e-050
gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synth... 199 5e-050
gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA... 199 5e-050
gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene... 199 5e-050
emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome ... 199 5e-050
dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose syn... 199 5e-050
ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G1... 199 5e-050
ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G1... 199 5e-050
ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM... 199 5e-050
gb|BE038216.1|BE038216 AA10E02 AA Arabidopsis thaliana cDNA... 198 2e-049
gb|AV823492.1|AV823492 AV823492 RAFL5 Arabidopsis thaliana ... 198 2e-049
gb|AV523438.1|AV523438 AV523438 Arabidopsis thaliana aboveg... 198 2e-049
gb|AV523635.1|AV523635 AV523635 Arabidopsis thaliana aboveg... 198 2e-049
gb|AV546683.1|AV546683 AV546683 Arabidopsis thaliana roots ... 198 2e-049
gb|AV547198.1|AV547198 AV547198 Arabidopsis thaliana roots ... 198 2e-049
gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synth... 198 2e-049
dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-g... 198 2e-049
gb|AY045960.1| Arabidopsis thaliana putative cellulose synt... 198 2e-049
emb|AX030946.1| Sequence 9 from Patent WO9800549 198 2e-049
gb|BT002335.1| Arabidopsis thaliana clone C104938 putative ... 198 2e-049
emb|BX833092.1|CNS0A0FM Arabidopsis thaliana Full-length cD... 198 2e-049
dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosom... 198 2e-049
ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNT... 198 2e-049
gb|AV548122.1|AV548122 AV548122 Arabidopsis thaliana roots ... 194 2e-048
gb|AV530046.1|AV530046 AV530046 Arabidopsis thaliana aboveg... 193 6e-048
emb|BX833785.1|CNS0A0C4 Arabidopsis thaliana Full-length cD... 193 6e-048
gb|AV539863.1|AV539863 AV539863 Arabidopsis thaliana roots ... 192 9e-048
gb|AV559974.1|AV559974 AV559974 Arabidopsis thaliana green ... 192 1e-047
gb|AV561551.1|AV561551 AV561551 Arabidopsis thaliana green ... 184 3e-045
gb|AV564636.1|AV564636 AV564636 Arabidopsis thaliana green ... 184 3e-045
gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8... 170 3e-044
ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNT... 170 3e-044
gb|BH810657.1|BH810657 SALK_051024 Arabidopsis thaliana TDN... 165 1e-042
dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosom... 167 1e-042
ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNT... 167 1e-042
gb|AY136423.1| Arabidopsis thaliana cellulose synthase cata... 167 1e-042
gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complet... 167 1e-042
gb|AV524358.1|AV524358 AV524358 Arabidopsis thaliana aboveg... 167 1e-042
emb|AL080857.1|CNS00MNV Arabidopsis thaliana genome survey ... 167 1e-042
gb|B96505.1|B96505 F23A23TF IGF Arabidopsis thaliana genomi... 167 1e-042
gb|AV523533.1|AV523533 AV523533 Arabidopsis thaliana aboveg... 175 2e-042
gb|T20516.1|T20516 2524 Lambda-PRL2 Arabidopsis thaliana cD... 174 3e-042
gb|AV538027.1|AV538027 AV538027 Arabidopsis thaliana roots ... 174 3e-042
gb|AV552905.1|AV552905 AV552905 Arabidopsis thaliana roots ... 174 3e-042
gb|CK121679.1|CK121679 202d06.p1 AtM1 Arabidopsis thaliana ... 174 3e-042
gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synth... 174 3e-042
dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-g... 174 3e-042
dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-g... 174 3e-042
dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-g... 174 3e-042
dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-g... 174 3e-042
emb|AX030938.1| Sequence 1 from Patent WO9800549 174 3e-042
emb|AX030940.1| Sequence 3 from Patent WO9800549 174 3e-042
emb|AX030942.1| Sequence 5 from Patent WO9800549 174 3e-042
emb|AX030948.1| Sequence 11 from Patent WO9800549 174 3e-042
gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R1... 174 3e-042
emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cD... 174 3e-042
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 174 3e-042
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 174 3e-042
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 174 3e-042
dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose syn... 174 3e-042
ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNT... 174 3e-042
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 174 3e-042
dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosom... 166 3e-042
ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNT... 166 3e-042
gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synth... 166 3e-042
emb|AX507835.1| Sequence 2530 from Patent WO0216655 166 3e-042
gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, ... 166 3e-042
gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, ... 166 3e-042
gb|AV782896.1|AV782896 AV782896 RAFL5 Arabidopsis thaliana ... 166 3e-042
gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana ... 173 4e-042
gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana ... 173 4e-042
gb|AV811500.1|AV811500 AV811500 RAFL9 Arabidopsis thaliana ... 173 4e-042
gb|AV816883.1|AV816883 AV816883 RAFL9 Arabidopsis thaliana ... 173 4e-042
gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synth... 173 4e-042
gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like... 173 4e-042
emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome... 173 4e-042
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 173 4e-042
ref|NM_117993.2| Arabidopsis thaliana MYB98; DNA binding / ... 173 4e-042
ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNT... 173 4e-042
gb|AV810887.1|AV810887 AV810887 RAFL9 Arabidopsis thaliana ... 173 5e-042
emb|BX829237.1|CNS0A4ID Arabidopsis thaliana Full-length cD... 173 5e-042
gb|AQ964327.1|AQ964327 LERGV37TR LERG Arabidopsis thaliana ... 161 1e-041
gb|AV523143.1|AV523143 AV523143 Arabidopsis thaliana aboveg... 171 1e-041
gb|AV813548.1|AV813548 AV813548 RAFL9 Arabidopsis thaliana ... 171 2e-041
gb|AV817718.1|AV817718 AV817718 RAFL9 Arabidopsis thaliana ... 171 2e-041
dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-g... 165 3e-041
emb|AX030944.1| Sequence 7 from Patent WO9800549 165 3e-041
gb|AI999519.1|AI999519 701556274 A. thaliana, Columbia Col-... 170 4e-041
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 170 4e-041
emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosom... 165 4e-041
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 165 4e-041
gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synth... 165 4e-041
ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synt... 165 4e-041
emb|AX505864.1| Sequence 559 from Patent WO0216655 165 4e-041
gb|AY059858.1| Arabidopsis thaliana cellulose synthase cata... 165 4e-041
gb|AY093308.1| Arabidopsis thaliana cellulose synthase cata... 165 4e-041
gb|AV538691.1|AV538691 AV538691 Arabidopsis thaliana roots ... 165 4e-041
gb|BP643951.1|BP643951 BP643951 RAFL19 Arabidopsis thaliana... 170 5e-041
gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B... 169 7e-041
emb|BX821788.1|CNS0A924 Arabidopsis thaliana Full-length cD... 169 7e-041
emb|BX822015.1|CNS0AAAJ Arabidopsis thaliana Full-length cD... 169 7e-041
ref|NM_128111.2| Arabidopsis thaliana CESA10 (CELLULASE SYN... 169 7e-041
gb|AV524115.1|AV524115 AV524115 Arabidopsis thaliana aboveg... 161 8e-041
gb|AV784570.1|AV784570 AV784570 RAFL5 Arabidopsis thaliana ... 161 8e-041
gb|AV782576.1|AV782576 AV782576 RAFL4 Arabidopsis thaliana ... 169 9e-041
gb|AV523139.1|AV523139 AV523139 Arabidopsis thaliana aboveg... 169 9e-041
gb|BP614740.1|BP614740 BP614740 RAFL16 Arabidopsis thaliana... 169 9e-041
gb|BP582979.1|BP582979 BP582979 RAFL14 Arabidopsis thaliana... 168 2e-040
emb|BX829135.1|CNS0A3FB Arabidopsis thaliana Full-length cD... 166 5e-040
gb|AV560166.1|AV560166 AV560166 Arabidopsis thaliana green ... 165 2e-039
gb|BP617268.1|BP617268 BP617268 RAFL16 Arabidopsis thaliana... 159 2e-039
gb|AI995332.1|AI995332 701673135 A. thaliana, Columbia Col-... 164 2e-039
gb|AV521693.1|AV521693 AV521693 Arabidopsis thaliana aboveg... 164 2e-039
gb|BP787110.1|BP787110 BP787110 RAFL7 Arabidopsis thaliana ... 164 3e-039
gb|AV546309.1|AV546309 AV546309 Arabidopsis thaliana roots ... 161 2e-038
emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cD... 152 3e-038
gb|BP780628.1|BP780628 BP780628 RAFL7 Arabidopsis thaliana ... 152 4e-038
gb|AV546832.1|AV546832 AV546832 Arabidopsis thaliana roots ... 151 8e-038
gb|BP804846.1|BP804846 BP804846 RAFL16 Arabidopsis thaliana... 153 1e-037
gb|AV546311.1|AV546311 AV546311 Arabidopsis thaliana roots ... 158 1e-037
gb|BP643870.1|BP643870 BP643870 RAFL19 Arabidopsis thaliana... 155 2e-036
gb|BP640442.1|BP640442 BP640442 RAFL19 Arabidopsis thaliana... 154 2e-036
gb|AV816808.1|AV816808 AV816808 RAFL9 Arabidopsis thaliana ... 142 5e-036
gb|BP791266.1|BP791266 BP791266 RAFL7 Arabidopsis thaliana ... 153 6e-036
gb|AV536829.1|AV536829 AV536829 Arabidopsis thaliana liquid... 152 9e-036
gb|AV546312.1|AV546312 AV546312 Arabidopsis thaliana roots ... 151 2e-035
gb|BH810643.1|BH810643 SALK_051007 Arabidopsis thaliana TDN... 150 3e-035
gb|AV792682.1|AV792682 AV792682 RAFL7 Arabidopsis thaliana ... 150 3e-035
gb|BP791204.1|BP791204 BP791204 RAFL7 Arabidopsis thaliana ... 150 4e-035
gb|AI999503.1|AI999503 701556173 A. thaliana, Columbia Col-... 122 8e-035
gb|AB038726.1|AB038726 AB038726 Arabidopsis thaliana Above-... 140 1e-034
gb|AV442267.1|AV442267 AV442267 Arabidopsis thaliana above-... 148 2e-034
gb|AV540720.1|AV540720 AV540720 Arabidopsis thaliana roots ... 139 2e-034
gb|BP655044.1|BP655044 BP655044 RAFL19 Arabidopsis thaliana... 147 3e-034
gb|AV558087.1|AV558087 AV558087 Arabidopsis thaliana green ... 146 7e-034
gb|BP777777.1|BP777777 BP777777 RAFL7 Arabidopsis thaliana ... 145 1e-033
gb|AV548474.1|AV548474 AV548474 Arabidopsis thaliana roots ... 136 3e-033
gb|BP649265.1|BP649265 BP649265 RAFL19 Arabidopsis thaliana... 134 7e-033
gb|AV812648.1|AV812648 AV812648 RAFL9 Arabidopsis thaliana ... 142 9e-033
gb|AV548554.1|AV548554 AV548554 Arabidopsis thaliana roots ... 133 2e-031
gb|AA712502.1|AA712502 32217 Lambda-PRL2 Arabidopsis thalia... 138 2e-031
gb|AV562949.1|AV562949 AV562949 Arabidopsis thaliana green ... 138 2e-031
gb|BP793142.1|BP793142 BP793142 RAFL7 Arabidopsis thaliana ... 137 3e-031
gb|AV546043.1|AV546043 AV546043 Arabidopsis thaliana roots ... 137 4e-031
gb|B96203.1|B96203 T18H8TFB TAMU Arabidopsis thaliana genom... 135 2e-030
gb|BP642979.1|BP642979 BP642979 RAFL19 Arabidopsis thaliana... 126 2e-030
gb|CL497288.1|CL497288 SAIL_639_H07.v1 SAIL Collection Arab... 134 2e-030
gb|BP784974.1|BP784974 BP784974 RAFL7 Arabidopsis thaliana ... 128 3e-030
gb|BP791873.1|BP791873 BP791873 RAFL7 Arabidopsis thaliana ... 134 3e-030
gb|AV550996.1|AV550996 AV550996 Arabidopsis thaliana roots ... 133 4e-030
gb|BP648320.1|BP648320 BP648320 RAFL19 Arabidopsis thaliana... 123 1e-029
gb|AI994360.1|AI994360 701557762 A. thaliana, Ohio State cl... 121 6e-029
gb|AV547280.1|AV547280 AV547280 Arabidopsis thaliana roots ... 109 6e-029
gb|BP651689.1|BP651689 BP651689 RAFL19 Arabidopsis thaliana... 129 7e-029
gb|AV537459.1|AV537459 AV537459 Arabidopsis thaliana roots ... 128 2e-028
emb|AJ836276.1| Arabidopsis thaliana T-DNA flanking sequenc... 121 4e-028
gb|AV560817.1|AV560817 AV560817 Arabidopsis thaliana green ... 125 2e-027
gb|AI993628.1|AI993628 701496831 A. thaliana, Ohio State cl... 93 4e-027
gb|BP602576.1|BP602576 BP602576 RAFL16 Arabidopsis thaliana... 95 4e-026
gb|BP616599.1|BP616599 BP616599 RAFL16 Arabidopsis thaliana... 112 1e-025
gb|AV523450.1|AV523450 AV523450 Arabidopsis thaliana aboveg... 118 1e-025
gb|T45311.1|T45311 8574 Lambda-PRL2 Arabidopsis thaliana cD... 118 2e-025
gb|BP590935.1|BP590935 BP590935 RAFL15 Arabidopsis thaliana... 118 2e-025
gb|AV523377.1|AV523377 AV523377 Arabidopsis thaliana aboveg... 115 1e-024
gb|B20175.1|B20175 T18H8-T7 TAMU Arabidopsis thaliana genom... 115 2e-024
gb|BP574614.1|BP574614 BP574614 RAFL14 Arabidopsis thaliana... 90 2e-024
emb|AJ836364.1| Arabidopsis thaliana T-DNA flanking sequenc... 108 3e-024
gb|BP652497.1|BP652497 BP652497 RAFL19 Arabidopsis thaliana... 76 5e-024
gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State cl... 113 6e-024
gb|AV803379.1|AV803379 AV803379 RAFL9 Arabidopsis thaliana ... 112 9e-024
gb|AV539120.1|AV539120 AV539120 Arabidopsis thaliana roots ... 103 1e-023
gb|AV561501.1|AV561501 AV561501 Arabidopsis thaliana green ... 111 2e-023
gb|BP784043.1|BP784043 BP784043 RAFL7 Arabidopsis thaliana ... 100 1e-022
gb|BP790874.1|BP790874 BP790874 RAFL7 Arabidopsis thaliana ... 100 1e-022
gb|BP617130.1|BP617130 BP617130 RAFL16 Arabidopsis thaliana... 72 2e-022
gb|AV798801.1|AV798801 AV798801 RAFL9 Arabidopsis thaliana ... 107 3e-022
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 107 3e-022
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 107 3e-022
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 107 3e-022
emb|BX818076.1|CNS0ACOJ Arabidopsis thaliana Full-length cD... 107 3e-022
ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose sy... 107 3e-022
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 107 3e-022
gb|AV817996.1|AV817996 AV817996 RAFL9 Arabidopsis thaliana ... 106 7e-022
gb|AV521149.1|AV521149 AV521149 Arabidopsis thaliana aboveg... 106 7e-022
gb|AV523332.1|AV523332 AV523332 Arabidopsis thaliana aboveg... 106 7e-022
gb|AV546030.1|AV546030 AV546030 Arabidopsis thaliana roots ... 106 7e-022
gb|AV546317.1|AV546317 AV546317 Arabidopsis thaliana roots ... 106 7e-022
gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synth... 106 7e-022
gb|AF360180.1| Arabidopsis thaliana putative cellulose synt... 106 7e-022
gb|AY039996.1| Arabidopsis thaliana putative cellulose synt... 106 7e-022
emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene fo... 106 7e-022
gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome II... 106 7e-022
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 106 7e-022
emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome ... 106 7e-022
ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNT... 106 7e-022
ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose sy... 106 7e-022
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 106 7e-022
gb|AV542787.1|AV542787 AV542787 Arabidopsis thaliana roots ... 105 1e-021
gb|BP660707.1|BP660707 BP660707 RAFL21 Arabidopsis thaliana... 87 1e-021
gb|CW802323.1|CW802323 WiscDsLox477-480I22 Arabidopsis thal... 104 3e-021
gb|AV796167.1|AV796167 AV796167 RAFL9 Arabidopsis thaliana ... 104 3e-021
gb|AV546912.1|AV546912 AV546912 Arabidopsis thaliana roots ... 104 3e-021
gb|AV548317.1|AV548317 AV548317 Arabidopsis thaliana roots ... 104 3e-021
gb|AV548634.1|AV548634 AV548634 Arabidopsis thaliana roots ... 104 3e-021
gb|AV548647.1|AV548647 AV548647 Arabidopsis thaliana roots ... 104 3e-021
gb|AV564362.1|AV564362 AV564362 Arabidopsis thaliana green ... 95 4e-021
gb|BP654668.1|BP654668 BP654668 RAFL19 Arabidopsis thaliana... 103 5e-021
emb|BX821964.1|CNS0A97E Arabidopsis thaliana Full-length cD... 102 9e-021
>gb|AV544917.1|AV544917 AV544917 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ63c06F 3', mRNA sequence
Length = 645
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / -3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 442 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 263
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 262 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 119
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / +3
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 159 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 338
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 339 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 440
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / +2
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 110 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 289
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 290 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 442
>gb|AV563704.1|AV563704 AV563704 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ191g11F 3', mRNA sequence
Length = 575
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 494 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 315
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 314 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 171
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / +1
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 211 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 390
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 391 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 492
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / +3
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 162 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 341
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 342 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 494
>gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX5) mRNA, complete cds
Length = 3168
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 2842 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 3021
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 3022 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 3165
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / -2
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 3125 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 2946
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 2945 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 2844
Score = 105 bits (225), Expect = 1e-021
Identities = 44/109 (40%), Positives = 74/109 (67%)
Frame = -3 / -1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+ + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M+N
Sbjct: 3168 LTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKMNN 2989
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
PK +++ P++ +P +SI++ + N+ ++TN V+ +S RR + PFK
Sbjct: 2988 DPKREKQFPKKRSPRTISIVNSVRNSGNNTNHVEDNESCRRDEKSCPFK 2842
>gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R50150) putative cellulose
synthase catalytic subunit (At5g44030) mRNA, complete cds
Length = 3377
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 2895 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 3074
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 3075 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 3218
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / -2
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 3178 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 2999
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 2998 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 2897
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / -1
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 3227 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 3048
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 3047 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 2895
>gb|BT006111.1| Arabidopsis thaliana clone U50150 putative cellulose synthase
catalytic subunit (At5g44030) mRNA, complete cds
Length = 3181
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 2824 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 3003
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 3004 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 3147
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / -3
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 3107 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 2928
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 2927 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 2826
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / -2
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 3156 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 2977
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 2976 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 2824
>emb|BX833432.1|CNS09Z0L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL54ZH10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 838
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 356 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 535
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 536 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 679
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / -2
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 639 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 460
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 459 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 358
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / -1
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 688 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 509
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 508 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 356
>dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRH10
Length = 71522
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 49332 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 49511
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 49512 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 49655
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / -2
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 49615 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 49436
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 49435 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 49334
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / -1
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 49664 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 49485
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 49484 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 49332
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 16111959 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 16112138
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 16112139 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 16112282
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 5490160 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 5489981
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 5489980 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 5489837
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 1459765 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 1459586
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 1459585 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 1459442
Score = 167 bits (359), Expect = 3e-040
Identities = 62/95 (65%), Positives = 78/95 (82%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N IGV+ G+S+AI+NGY+SWGPLFG+LFFAFWVI+HLYPFLKGL
Sbjct: 2896734 FKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGL 2896913
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
+G+Q+R PTI++VWSILLASI +LLWVR++PF+AK
Sbjct: 2896914 LGKQDRMPTIILVWSILLASILTLLWVRVNPFVAK 2897018
Score = 166 bits (356), Expect = 9e-040
Identities = 62/95 (65%), Positives = 77/95 (81%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N IGV+ GVS+AI+NGY+SWGPLFG+LFFA WVI+HLYPFLKGL
Sbjct: 22911320 FKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGL 22911499
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
+G+Q+R PTI++VWSILLASI +LLWVR++PF+AK
Sbjct: 22911500 LGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAK 22911604
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 1459491 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 1459670
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 1459671 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 1459766
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / -1
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 16112242 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 16112063
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 16112062 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 16111961
Score = 145 bits (312), Expect = 1e-033
Identities = 59/96 (61%), Positives = 70/96 (72%)
Frame = -1 / -1
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
FA G RTQRS +IEA R+DQT IVG+L C P++PLRKGYRW +TQ AK + PKRGPH
Sbjct: 2897017 FATNGLTRTQRSVRIEARRIDQTRMIVGILSCFPSRPLRKGYRWRMTQKAKNNLPKRGPH 2896838
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
+SYPLLIA + P TP+ F S VVGGI VHL +
Sbjct: 2896837 ESYPLLIASDIPTMTPITFMMSSVVGGIKSDVHLKM 2896730
Score = 136 bits (291), Expect = 8e-031
Identities = 57/94 (60%), Positives = 68/94 (72%)
Frame = -1 / -2
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
FA G RTQRS +IEA RMDQT +VG+L C P+KPLR G R +TQ+AK S PK GPH
Sbjct: 22911603 FATNGLTRTQRSVRIEARRMDQTTIMVGILSCFPSKPLRNG*R*MMTQSAKNSLPKSGPH 22911424
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+SYPLL+A ETP TPM F S+V+GG+ VHL
Sbjct: 22911423 ESYPLLMASETPTMTPMTFMMSRVIGGMRSEVHL 22911322
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 5489886 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 5490065
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 5490066 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 5490161
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / -3
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 16112291 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 16112112
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 16112111 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 16111959
Score = 106 bits (226), Expect = 7e-022
Identities = 43/90 (47%), Positives = 52/90 (57%)
Frame = +3 / +3
Query: 9 KWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLV 188
KW N I + G S I + W L G +FF+FWV+ HLYPF KGL+
Sbjct: 5327952 KWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLM 5328131
Query: 189 GRQNRTPTIVIVWSILLASIFSLLWVRIDP 278
GR+ RTPTIV VWS L+A SLLWV I+P
Sbjct: 5328132 GRRGRTPTIVYVWSGLVAITISLLWVAINP 5328221
>ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNTHASE 4); transferase,
transferring glycosyl groups AT5G44030 (CESA4) mRNA,
complete cds
Length = 3745
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 2892 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 3071
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 3072 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 3215
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / -1
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 3175 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 2996
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 2995 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 2894
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / -3
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 3224 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 3045
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 3044 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 2892
>ref|NM_123771.3| Arabidopsis thaliana unknown protein AT5G44040 mRNA, complete cds
Length = 2278
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / -3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 2075 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 1896
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 1895 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 1752
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / +1
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 1792 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 1971
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 1972 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 2073
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / +3
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 1743 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 1922
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 1923 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 2075
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 208 bits (449), Expect = 1e-052
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 17736465 FKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGL 17736644
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 17736645 MGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 17736788
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 5737187 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 5737008
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 5737007 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 5736864
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 1530728 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 1530549
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 1530548 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 1530405
Score = 167 bits (359), Expect = 3e-040
Identities = 62/95 (65%), Positives = 78/95 (82%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N IGV+ G+S+AI+NGY+SWGPLFG+LFFAFWVI+HLYPFLKGL
Sbjct: 3077649 FKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGL 3077828
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
+G+Q+R PTI++VWSILLASI +LLWVR++PF+AK
Sbjct: 3077829 LGKQDRMPTIILVWSILLASILTLLWVRVNPFVAK 3077933
Score = 166 bits (356), Expect = 9e-040
Identities = 62/95 (65%), Positives = 77/95 (81%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N IGV+ GVS+AI+NGY+SWGPLFG+LFFA WVI+HLYPFLKGL
Sbjct: 25903233 FKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGL 25903412
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
+G+Q+R PTI++VWSILLASI +LLWVR++PF+AK
Sbjct: 25903413 LGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAK 25903517
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 1530454 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 1530633
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 1530634 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 1530729
Score = 149 bits (319), Expect = 1e-034
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = -1 / -3
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 17736748 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 17736569
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+ YPLLIA ETPATTP +VVGG+ +VVHL
Sbjct: 17736568 EPYPLLIASETPATTPTMLRIMRVVGGMRRVVHL 17736467
Score = 145 bits (312), Expect = 1e-033
Identities = 59/96 (61%), Positives = 70/96 (72%)
Frame = -1 / -3
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
FA G RTQRS +IEA R+DQT IVG+L C P++PLRKGYRW +TQ AK + PKRGPH
Sbjct: 3077932 FATNGLTRTQRSVRIEARRIDQTRMIVGILSCFPSRPLRKGYRWRMTQKAKNNLPKRGPH 3077753
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
+SYPLLIA + P TP+ F S VVGGI VHL +
Sbjct: 3077752 ESYPLLIASDIPTMTPITFMMSSVVGGIKSDVHLKM 3077645
Score = 136 bits (291), Expect = 8e-031
Identities = 57/94 (60%), Positives = 68/94 (72%)
Frame = -1 / -3
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
FA G RTQRS +IEA RMDQT +VG+L C P+KPLR G R +TQ+AK S PK GPH
Sbjct: 25903516 FATNGLTRTQRSVRIEARRMDQTTIMVGILSCFPSKPLRNG*R*MMTQSAKNSLPKSGPH 25903337
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
+SYPLL+A ETP TPM F S+V+GG+ VHL
Sbjct: 25903336 ESYPLLMASETPTMTPMTFMMSRVIGGMRSEVHL 25903235
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 5736913 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 5737092
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 5737093 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 5737188
Score = 108 bits (230), Expect = 2e-022
Identities = 45/111 (40%), Positives = 76/111 (68%)
Frame = -3 / -2
Query: 338 PLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQM 159
P + + TLL+ T + +ER+NPNP + ED S++D P ++N RC VL +QTFEE I+M
Sbjct: 17736797 PHLTVDATLLQ*RTSLFRQERINPNPNQREDRSEKDRPKNNNRRCSVLSTHQTFEERIKM 17736618
Query: 158 DNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFK 6
+N PK +++ P++ +P +SI++ + N+ ++T+ V+ +S RR + G PFK
Sbjct: 17736617 NNDPKREKQFPKKRSPRTISIVNSVRNSGNNTDHVENNESCRRDEKGCPFK 17736465
Score = 106 bits (226), Expect = 7e-022
Identities = 43/90 (47%), Positives = 52/90 (57%)
Frame = +3 / +3
Query: 9 KWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLV 188
KW N I + G S I + W L G +FF+FWV+ HLYPF KGL+
Sbjct: 5564979 KWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLM 5565158
Query: 189 GRQNRTPTIVIVWSILLASIFSLLWVRIDP 278
GR+ RTPTIV VWS L+A SLLWV I+P
Sbjct: 5565159 GRRGRTPTIVYVWSGLVAITISLLWVAINP 5565248
>gb|AU227892.1|AU227892 AU227892 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-30-K05 3',
mRNA sequence
Length = 446
Score = 203 bits (438), Expect = 4e-051
Identities = 78/92 (84%), Positives = 87/92 (94%)
Frame = +3 / -1
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSI
Sbjct: 416 NMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSI 237
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 236 LLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 141
Score = 141 bits (302), Expect = 2e-032
Identities = 61/88 (69%), Positives = 67/88 (76%)
Frame = -1 / +1
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F +KGSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 181 FGKKGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 360
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGI 26
+ YPLLIA ETPATTP +VVGG+
Sbjct: 361 EPYPLLIASETPATTPTMLRIMRVVGGM 444
>gb|AV557902.1|AV557902 AV557902 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ083f12F 3', mRNA sequence
Length = 524
Score = 203 bits (438), Expect = 4e-051
Identities = 78/92 (84%), Positives = 87/92 (94%)
Frame = +3 / -1
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAGVS+AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSI
Sbjct: 485 NMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSI 306
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSL+WVRIDPFL K GPLL++CG+DC
Sbjct: 305 LLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 210
Score = 141 bits (303), Expect = 2e-032
Identities = 61/91 (67%), Positives = 68/91 (74%)
Frame = -1 / +1
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 250 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 429
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKV 17
+ YPLLIA ETPATTP +VVGG+ +V
Sbjct: 430 EPYPLLIASETPATTPTMLRIMRVVGGMRRV 522
>gb|AV560162.1|AV560162 AV560162 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ130c09F 3', mRNA sequence
Length = 484
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / -3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 425 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 246
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 245 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 102
Score = 135 bits (289), Expect = 2e-030
Identities = 59/92 (64%), Positives = 67/92 (72%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 151 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 330
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI++VVHLN
Sbjct: 331 PLLMASEMPATTPTMFMIKTVVGGISRVVHLN 426
>gb|AV566035.1|AV566035 AV566035 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ235d12F 3', mRNA sequence
Length = 545
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 424 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 245
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 244 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 101
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 150 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 329
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 330 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 425
>gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
gene, complete cds
Length = 7234
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 4314 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 4493
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 4494 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 4637
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 4588 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 4409
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 4408 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 4313
>gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
mRNA, complete cds
Length = 3081
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 2755 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 2934
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 2935 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 3078
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / -2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 3029 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 2850
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 2849 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 2754
>gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA, complete cds
Length = 3355
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 2800 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 2979
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 2980 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 3123
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / -3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 3074 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 2895
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 2894 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 2799
>gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene, complete cds
Length = 3081
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 2755 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 2934
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 2935 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 3078
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / -2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 3029 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 2850
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 2849 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 2754
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project)
Length = 33563
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 20989 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 20810
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 20809 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 20666
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 20715 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 20894
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 20895 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 20990
>dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit,
partial cds, clone: RAFL22-31-O12
Length = 930
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 430 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 609
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 610 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 753
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / -2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 704 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 525
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 524 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 429
>ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G17410 transcript variant
AT5G17410.1 mRNA, complete cds
Length = 3027
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / -3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 2848 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 2669
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 2668 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 2525
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 2574 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 2753
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 2754 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 2849
>ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G17410 transcript variant
AT5G17410.2 mRNA, complete cds
Length = 3030
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / -3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 2851 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 2672
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 2671 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 2528
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 2577 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 2756
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 2757 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 2852
>ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM 3); cellulose synthase
AT5G17420 (IRX3) mRNA, complete cds
Length = 3693
Score = 199 bits (430), Expect = 5e-050
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 2800 FKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGL 2979
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 2980 MGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 3123
Score = 134 bits (287), Expect = 3e-030
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / -2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 3074 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 2895
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A E PATTP F VVGGI+ VVHLN
Sbjct: 2894 PLLMASEMPATTPTMFMIKTVVGGISSVVHLN 2799
>gb|BE038216.1|BE038216 AA10E02 AA Arabidopsis thaliana cDNA 5' similar to cellulose
synthase catalytic subunit, mRNA sequence
Length = 691
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 87 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 266
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 267 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 410
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 361 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 182
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 181 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 86
>gb|AV823492.1|AV823492 AV823492 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-19-M03 5',
mRNA sequence
Length = 540
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 5 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 184
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 185 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 328
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 279 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 100
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 99 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 4
>gb|AV523438.1|AV523438 AV523438 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL27f02F 3', mRNA
sequence
Length = 596
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 488 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 309
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 308 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 165
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 214 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 393
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 394 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 489
>gb|AV523635.1|AV523635 AV523635 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL34f12F 3', mRNA
sequence
Length = 545
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 482 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 303
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 302 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 159
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 208 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 387
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 388 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 483
>gb|AV546683.1|AV546683 AV546683 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL17h10F 3', mRNA sequence
Length = 563
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 542 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 363
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 362 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 219
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 268 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 447
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 448 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 543
>gb|AV547198.1|AV547198 AV547198 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL27a09F 3', mRNA sequence
Length = 541
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 540 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 361
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 360 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 217
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / +2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 266 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 445
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 446 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 541
>gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-B)
mRNA, complete cds
Length = 3682
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 3127 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 3306
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 3307 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 3450
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 3401 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 3222
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 3221 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 3126
>dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3614
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 3088 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 3267
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 3268 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 3411
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 3362 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 3183
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 3182 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 3087
>gb|AY045960.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit
(At5g05170) mRNA, partial cds
Length = 574
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 5 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 184
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 185 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 328
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 279 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 100
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 99 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 4
>emb|AX030946.1| Sequence 9 from Patent WO9800549
Length = 3614
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 3088 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 3267
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 3268 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 3411
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 3362 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 3183
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 3182 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 3087
>gb|BT002335.1| Arabidopsis thaliana clone C104938 putative cellulose synthase
catalytic subunit (At5g05170) mRNA, complete cds
Length = 3229
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 2872 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 3051
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 3052 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 3195
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 3146 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 2967
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 2966 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 2871
>emb|BX833092.1|CNS0A0FM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL33ZG12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 670
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 134 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 313
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 314 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 457
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 408 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 229
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 228 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 133
>dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A11
Length = 29292
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 11325 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 11146
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 11145 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 11002
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / +2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 11051 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 11230
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 11231 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 11326
>ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNTHASE 3); cellulose
synthase/ transferase, transferring glycosyl groups
AT5G05170 (CESA3) mRNA, complete cds
Length = 3607
Score = 198 bits (426), Expect = 2e-049
Identities = 77/108 (71%), Positives = 88/108 (81%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 3054 FKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 3233
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VWS+LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 3234 MGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 3377
Score = 154 bits (330), Expect = 3e-036
Identities = 66/92 (71%), Positives = 70/92 (76%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 3328 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 3149
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLLIA ETPATTP KF S VVGGI VVHLN
Sbjct: 3148 PLLIA*ETPATTPTKFTMSSVVGGIRSVVHLN 3053
>gb|AV548122.1|AV548122 AV548122 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL47f02F 3', mRNA sequence
Length = 512
Score = 194 bits (419), Expect = 2e-048
Identities = 72/92 (78%), Positives = 85/92 (92%)
Frame = +3 / -2
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+
Sbjct: 484 NIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSV 305
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 304 LLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 209
Score = 122 bits (260), Expect = 2e-026
Identities = 54/85 (63%), Positives = 60/85 (70%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 258 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 437
Query: 100 PLLIALETPATTPMKFNRSKVVGGI 26
PLL+A E PATTP F VVGGI
Sbjct: 438 PLLMASEMPATTPTMFMIKTVVGGI 512
>gb|AV530046.1|AV530046 AV530046 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL56g12R 5', mRNA
sequence
Length = 506
Score = 193 bits (415), Expect = 6e-048
Identities = 74/92 (80%), Positives = 85/92 (92%)
Frame = +3 / -3
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWS+
Sbjct: 489 NLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSV 310
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 309 LLASIFSLLWVRIDPFTSRVTGPDILECGINC 214
Score = 133 bits (284), Expect = 7e-030
Identities = 57/81 (70%), Positives = 61/81 (75%)
Frame = -1 / +2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 263 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 442
Query: 100 PLLIALETPATTPMKFNRSKV 38
PLLIA ETPATTP KF S V
Sbjct: 443 PLLIA*ETPATTPTKFTMSSV 505
>emb|BX833785.1|CNS0A0C4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL77ZA04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 509
Score = 193 bits (415), Expect = 6e-048
Identities = 74/92 (80%), Positives = 85/92 (92%)
Frame = +3 / +3
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWS+
Sbjct: 18 NLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSV 197
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVRIDPF ++ GP + ECG++C
Sbjct: 198 LLASIFSLLWVRIDPFTSRVTGPDILECGINC 293
Score = 133 bits (284), Expect = 7e-030
Identities = 57/81 (70%), Positives = 61/81 (75%)
Frame = -1 / -2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T +EKIEA R DQT T+VGV FC P KPLRKGY+ TITQ AK + PK GPHD Y
Sbjct: 244 KGSILTHNNEKIEAKRTDQTTTMVGVRFCRPIKPLRKGYK*TITQKAKNNLPKSGPHDWY 65
Query: 100 PLLIALETPATTPMKFNRSKV 38
PLLIA ETPATTP KF S V
Sbjct: 64 PLLIA*ETPATTPTKFTMSSV 2
>gb|AV539863.1|AV539863 AV539863 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ140e01F 3', mRNA sequence
Length = 479
Score = 192 bits (414), Expect = 9e-048
Identities = 71/92 (77%), Positives = 85/92 (92%)
Frame = +3 / -3
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAG+S+AI+NGY+SWGPLFGKLFF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+
Sbjct: 465 NIVGVVAGISDAISNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSV 286
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 285 LLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 190
Score = 113 bits (242), Expect = 5e-024
Identities = 49/76 (64%), Positives = 55/76 (72%)
Frame = -1 / +2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 239 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 418
Query: 100 PLLIALETPATTPMKF 53
PLL+A E PATTP F
Sbjct: 419 PLLMASEMPATTPTMF 466
>gb|AV559974.1|AV559974 AV559974 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ126h03F 3', mRNA sequence
Length = 372
Score = 192 bits (413), Expect = 1e-047
Identities = 71/90 (78%), Positives = 84/90 (93%)
Frame = +3 / -3
Query: 60 IGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILL 239
+GVVAG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LL
Sbjct: 370 VGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLL 191
Query: 240 ASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
ASIFSLLWVRIDPF+ K GP +CG++C
Sbjct: 190 ASIFSLLWVRIDPFVLKTKGPDTSKCGINC 101
Score = 111 bits (238), Expect = 2e-023
Identities = 48/73 (65%), Positives = 54/73 (73%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 150 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 329
Query: 100 PLLIALETPATTP 62
PLL+A E PATTP
Sbjct: 330 PLLMASEMPATTP 368
>gb|AV561551.1|AV561551 AV561551 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ153d07F 3', mRNA sequence
Length = 393
Score = 184 bits (396), Expect = 3e-045
Identities = 70/81 (86%), Positives = 77/81 (95%)
Frame = +3 / -2
Query: 87 AINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWV 266
AINNGY SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WV
Sbjct: 392 AINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWV 213
Query: 267 RIDPFLAKDDGPLLEECGLDC 329
RIDPFL K GPLL++CG+DC
Sbjct: 212 RIDPFLPKQTGPLLKQCGVDC 150
Score = 114 bits (244), Expect = 2e-024
Identities = 49/68 (72%), Positives = 53/68 (77%)
Frame = -1 / +1
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
F + GSIRTQ EKIEA R+DQ TIVGV FCLP KPLRKG R T+TQNAK SFPK GP
Sbjct: 190 FGKNGSIRTQTKEKIEARRIDQRTTIVGVRFCLPIKPLRKG*R*TMTQNAKNSFPKSGPQ 369
Query: 109 DSYPLLIA 86
+ YPLLIA
Sbjct: 370 EPYPLLIA 393
>gb|AV564636.1|AV564636 AV564636 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ207g08F 3', mRNA sequence
Length = 417
Score = 184 bits (396), Expect = 3e-045
Identities = 68/86 (79%), Positives = 80/86 (93%)
Frame = +3 / -3
Query: 72 AGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIF 251
AG+S+AINNGY+SWGPLFGKLFF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIF
Sbjct: 415 AGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIF 236
Query: 252 SLLWVRIDPFLAKDDGPLLEECGLDC 329
SLLWVRIDPF+ K GP +CG++C
Sbjct: 235 SLLWVRIDPFVLKTKGPDTSKCGINC 158
Score = 104 bits (221), Expect = 4e-021
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ EKI+A+ DQ T+VGVLFCLP +PLR G R T+TQ KKS P RGP D Y
Sbjct: 207 KGSILTQSKEKIDANNTDQITTMVGVLFCLPIRPLRNG*R*TMTQKEKKSLPNRGPQD*Y 386
Query: 100 PLLIALETPA 71
PLL+A E PA
Sbjct: 387 PLLMASEMPA 416
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
sequence
Length = 107848
Score = 170 bits (366), Expect(2) = 3e-044
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GV+ GVS+AINNGY+SWGPLFG+LFFA WVIVHLYPFLKGL
Sbjct: 20089 FKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGL 20268
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKD 293
+G+Q+R PTI++VWSILLASI +LLWVR++PF++KD
Sbjct: 20269 LGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKD 20376
Score = 119 bits (255), Expect = 7e-026
Identities = 51/92 (55%), Positives = 62/92 (67%)
Frame = -1 / -3
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
G T + K+EA R+DQT +VG L C P+ PLR GY+ TITQ+AK + PK GP +SYP
Sbjct: 20360 GLTLTHKRVKMEARRIDQTNIMVGTLSCFPSNPLRNGYK*TITQSAKNNLPKSGPQESYP 20181
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
L IA ETP TP S+VVGGINK VHL +
Sbjct: 20180 LFIASETPTMTPTMLMISRVVGGINKDVHLKM 20085
Score = 30.4 bits (60), Expect(2) = 3e-044
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 294 DGPLLEECGLDC 329
DGP+LE CGLDC
Sbjct: 20374 DGPVLEICGLDC 20409
>ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNTHASE 9); transferase,
transferring glycosyl groups AT2G21770 (CESA9) mRNA,
complete cds
Length = 3308
Score = 170 bits (366), Expect(2) = 3e-044
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GV+ GVS+AINNGY+SWGPLFG+LFFA WVIVHLYPFLKGL
Sbjct: 2938 FKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGL 3117
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKD 293
+G+Q+R PTI++VWSILLASI +LLWVR++PF++KD
Sbjct: 3118 LGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKD 3225
Score = 119 bits (255), Expect = 7e-026
Identities = 51/92 (55%), Positives = 62/92 (67%)
Frame = -1 / -1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
G T + K+EA R+DQT +VG L C P+ PLR GY+ TITQ+AK + PK GP +SYP
Sbjct: 3209 GLTLTHKRVKMEARRIDQTNIMVGTLSCFPSNPLRNGYK*TITQSAKNNLPKSGPQESYP 3030
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
L IA ETP TP S+VVGGINK VHL +
Sbjct: 3029 LFIASETPTMTPTMLMISRVVGGINKDVHLKM 2934
Score = 30.4 bits (60), Expect(2) = 3e-044
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 294 DGPLLEECGLDC 329
DGP+LE CGLDC
Sbjct: 3223 DGPVLEICGLDC 3258
>gb|BH810657.1|BH810657 SALK_051024 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_051024, DNA sequence
Length = 407
Score = 165 bits (355), Expect(2) = 1e-042
Identities = 60/80 (75%), Positives = 75/80 (93%)
Frame = +3 / -2
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GV+ GVS+AINNGY+SWGPLFG+LFFA WVIVHLYPFLKGL+G+Q+R PTI++VWSI
Sbjct: 394 NIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSI 215
Query: 234 LLASIFSLLWVRIDPFLAKD 293
LLASI +LLWVR++PF++KD
Sbjct: 214 LLASILTLLWVRVNPFVSKD 155
Score = 30.4 bits (60), Expect(2) = 1e-042
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / -2
Query: 294 DGPLLEECGLDC 329
DGP+LE CGLDC
Sbjct: 157 DGPVLEICGLDC 122
>dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH9
Length = 82390
Score = 167 bits (359), Expect(2) = 1e-042
Identities = 62/95 (65%), Positives = 78/95 (82%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N IGV+ G+S+AI+NGY+SWGPLFG+LFFAFWVI+HLYPFLKGL
Sbjct: 30412 FKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGL 30591
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
+G+Q+R PTI++VWSILLASI +LLWVR++PF+AK
Sbjct: 30592 LGKQDRMPTIILVWSILLASILTLLWVRVNPFVAK 30696
Score = 145 bits (312), Expect = 1e-033
Identities = 59/96 (61%), Positives = 70/96 (72%)
Frame = -1 / -3
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
FA G RTQRS +IEA R+DQT IVG+L C P++PLRKGYRW +TQ AK + PKRGPH
Sbjct: 30695 FATNGLTRTQRSVRIEARRIDQTRMIVGILSCFPSRPLRKGYRWRMTQKAKNNLPKRGPH 30516
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
+SYPLLIA + P TP+ F S VVGGI VHL +
Sbjct: 30515 ESYPLLIASDIPTMTPITFMMSSVVGGIKSDVHLKM 30408
Score = 28.1 bits (55), Expect(2) = 1e-042
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 297 GPLLEECGLDC 329
GP+LE CGLDC
Sbjct: 30700 GPILEICGLDC 30732
>ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNTHASE 5); transferase,
transferring glycosyl groups AT5G09870 (CESA5) mRNA,
complete cds
Length = 3210
Score = 167 bits (359), Expect(2) = 1e-042
Identities = 62/95 (65%), Positives = 78/95 (82%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N IGV+ G+S+AI+NGY+SWGPLFG+LFFAFWVI+HLYPFLKGL
Sbjct: 2884 FKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGL 3063
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
+G+Q+R PTI++VWSILLASI +LLWVR++PF+AK
Sbjct: 3064 LGKQDRMPTIILVWSILLASILTLLWVRVNPFVAK 3168
Score = 145 bits (312), Expect = 1e-033
Identities = 59/96 (61%), Positives = 70/96 (72%)
Frame = -1 / -2
Query: 289 FARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPH 110
FA G RTQRS +IEA R+DQT IVG+L C P++PLRKGYRW +TQ AK + PKRGPH
Sbjct: 3167 FATNGLTRTQRSVRIEARRIDQTRMIVGILSCFPSRPLRKGYRWRMTQKAKNNLPKRGPH 2988
Query: 109 DSYPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
+SYPLLIA + P TP+ F S VVGGI VHL +
Sbjct: 2987 ESYPLLIASDIPTMTPITFMMSSVVGGIKSDVHLKM 2880
Score = 28.1 bits (55), Expect(2) = 1e-042
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 297 GPLLEECGLDC 329
GP+LE CGLDC
Sbjct: 3172 GPILEICGLDC 3204
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,490,593,064
Number of Sequences: 1013581
Number of extensions: 22084735
Number of successful extensions: 189768
Number of sequences better than 1.0e-020: 245
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 41040733610
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)