TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.3
(801 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana ... 255 1e-066
gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana ... 255 1e-066
gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS... 255 1e-066
gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-AD... 255 1e-066
gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana ... 255 1e-066
gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana ... 255 1e-066
gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A1... 255 1e-066
ref|NM_118843.2| Arabidopsis thaliana structural constituen... 255 1e-066
gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal ... 254 2e-066
gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, compl... 254 2e-066
emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cD... 254 2e-066
ref|NM_127604.2| Arabidopsis thaliana structural constituen... 254 2e-066
gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA... 254 3e-066
gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana ... 253 7e-066
gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS... 252 9e-066
gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal ... 252 1e-065
emb|AX506868.1| Sequence 1563 from Patent WO0216655 252 1e-065
gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRN... 251 2e-065
gb|CB254828.1|CB254828 58-E018361-019-007-C16-T7R MPIZ-ADIS... 241 2e-062
gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana ... 241 3e-062
gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana ... 241 3e-062
gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana ... 240 5e-062
gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower... 237 5e-061
gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADI... 227 4e-058
emb|BX826370.1|CNS0A41L Arabidopsis thaliana Full-length cD... 141 3e-057
gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana... 221 2e-056
gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana... 121 3e-056
gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana... 221 3e-056
gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana... 216 5e-055
gb|BP845987.1|BP845987 BP845987 RAFL21 Arabidopsis thaliana... 214 4e-054
gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana... 209 9e-053
emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cD... 209 1e-052
gb|BP800136.1|BP800136 BP800136 RAFL14 Arabidopsis thaliana... 200 1e-052
gb|BP863509.1|BP863509 BP863509 RAFL21 Arabidopsis thaliana... 123 8e-052
gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana... 204 3e-051
gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana... 179 8e-051
gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana... 202 1e-050
gb|BP845942.1|BP845942 BP845942 RAFL21 Arabidopsis thaliana... 133 2e-050
gb|BP864372.1|BP864372 BP864372 RAFL21 Arabidopsis thaliana... 115 3e-050
gb|BP843110.1|BP843110 BP843110 RAFL21 Arabidopsis thaliana... 200 4e-050
gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana... 199 9e-050
gb|T22860.1|T22860 4868 Lambda-PRL2 Arabidopsis thaliana cD... 194 2e-048
gb|BP856452.1|BP856452 BP856452 RAFL21 Arabidopsis thaliana... 135 4e-048
gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower... 192 1e-047
gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana... 192 1e-047
emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome... 82 1e-047
gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana... 134 4e-047
gb|BP856130.1|BP856130 BP856130 RAFL21 Arabidopsis thaliana... 126 5e-047
gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana... 190 5e-047
gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana... 189 7e-047
gb|BP635805.1|BP635805 BP635805 RAFL18 Arabidopsis thaliana... 188 3e-046
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 82 9e-046
gb|BP860765.1|BP860765 BP860765 RAFL21 Arabidopsis thaliana... 111 1e-045
gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C... 86 2e-045
gb|BP867797.1|BP867797 BP867797 RAFL21 Arabidopsis thaliana... 183 5e-045
gb|BP821710.1|BP821710 BP821710 RAFL19 Arabidopsis thaliana... 163 2e-044
gb|BP616173.1|BP616173 BP616173 RAFL16 Arabidopsis thaliana... 160 4e-043
gb|BP799467.1|BP799467 BP799467 RAFL14 Arabidopsis thaliana... 114 5e-043
gb|BP857725.1|BP857725 BP857725 RAFL21 Arabidopsis thaliana... 131 5e-043
gb|BP585750.1|BP585750 BP585750 RAFL15 Arabidopsis thaliana... 176 7e-043
gb|AI997481.1|AI997481 701554127 A. thaliana, Columbia Col-... 115 1e-042
gb|BP868284.1|BP868284 BP868284 RAFL21 Arabidopsis thaliana... 116 1e-042
gb|BE523677.1|BE523677 M40D11STM Arabidopsis developing see... 172 1e-041
gb|BP784666.1|BP784666 BP784666 RAFL7 Arabidopsis thaliana ... 172 1e-041
gb|BP578366.1|BP578366 BP578366 RAFL14 Arabidopsis thaliana... 148 3e-041
gb|BP580988.1|BP580988 BP580988 RAFL14 Arabidopsis thaliana... 168 2e-040
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 82 2e-040
gb|AV564782.1|AV564782 AV564782 Arabidopsis thaliana green ... 166 8e-040
gb|BP577085.1|BP577085 BP577085 RAFL14 Arabidopsis thaliana... 166 8e-040
gb|BP806298.1|BP806298 BP806298 RAFL16 Arabidopsis thaliana... 116 1e-039
gb|BP594946.1|BP594946 BP594946 RAFL15 Arabidopsis thaliana... 165 1e-039
gb|BP597426.1|BP597426 BP597426 RAFL15 Arabidopsis thaliana... 164 3e-039
gb|BP854616.1|BP854616 BP854616 RAFL21 Arabidopsis thaliana... 106 6e-039
gb|BP849718.1|BP849718 BP849718 RAFL21 Arabidopsis thaliana... 95 8e-038
gb|AV789575.1|AV789575 AV789575 RAFL6 Arabidopsis thaliana ... 159 1e-037
gb|AV820668.1|AV820668 AV820668 RAFL11 Arabidopsis thaliana... 159 1e-037
gb|BP575262.1|BP575262 BP575262 RAFL14 Arabidopsis thaliana... 159 1e-037
gb|AV789152.1|AV789152 AV789152 RAFL6 Arabidopsis thaliana ... 155 1e-036
gb|BP626679.1|BP626679 BP626679 RAFL17 Arabidopsis thaliana... 155 2e-036
gb|BP861626.1|BP861626 BP861626 RAFL21 Arabidopsis thaliana... 153 6e-036
gb|BP860007.1|BP860007 BP860007 RAFL21 Arabidopsis thaliana... 111 8e-036
gb|BP641343.1|BP641343 BP641343 RAFL19 Arabidopsis thaliana... 151 2e-035
gb|AV790235.1|AV790235 AV790235 RAFL6 Arabidopsis thaliana ... 150 4e-035
gb|AV785709.1|AV785709 AV785709 RAFL6 Arabidopsis thaliana ... 149 7e-035
gb|BP610096.1|BP610096 BP610096 RAFL16 Arabidopsis thaliana... 149 7e-035
gb|BP625359.1|BP625359 BP625359 RAFL17 Arabidopsis thaliana... 123 2e-034
gb|BP862318.1|BP862318 BP862318 RAFL21 Arabidopsis thaliana... 119 2e-034
gb|BP634478.1|BP634478 BP634478 RAFL17 Arabidopsis thaliana... 146 9e-034
gb|BP594218.1|BP594218 BP594218 RAFL15 Arabidopsis thaliana... 144 2e-033
gb|BP799123.1|BP799123 BP799123 RAFL14 Arabidopsis thaliana... 56 3e-033
gb|BP844124.1|BP844124 BP844124 RAFL21 Arabidopsis thaliana... 73 3e-033
gb|BP589850.1|BP589850 BP589850 RAFL15 Arabidopsis thaliana... 97 2e-032
gb|BP567540.1|BP567540 BP567540 RAFL14 Arabidopsis thaliana... 140 4e-032
gb|AA585838.1|AA585838 28487 Lambda-PRL2 Arabidopsis thalia... 139 1e-031
gb|BP575360.1|BP575360 BP575360 RAFL14 Arabidopsis thaliana... 136 1e-030
gb|BP837234.1|BP837234 BP837234 RAFL19 Arabidopsis thaliana... 136 1e-030
gb|BP587944.1|BP587944 BP587944 RAFL15 Arabidopsis thaliana... 134 3e-030
gb|BP643814.1|BP643814 BP643814 RAFL19 Arabidopsis thaliana... 134 4e-030
gb|BP613409.1|BP613409 BP613409 RAFL16 Arabidopsis thaliana... 113 1e-029
gb|BP627452.1|BP627452 BP627452 RAFL17 Arabidopsis thaliana... 130 5e-029
gb|AV785880.1|AV785880 AV785880 RAFL6 Arabidopsis thaliana ... 128 2e-028
gb|BP628325.1|BP628325 BP628325 RAFL17 Arabidopsis thaliana... 128 2e-028
gb|BP629494.1|BP629494 BP629494 RAFL17 Arabidopsis thaliana... 127 6e-028
gb|AV808368.1|AV808368 AV808368 RAFL9 Arabidopsis thaliana ... 106 9e-028
gb|BP659935.1|BP659935 BP659935 RAFL19 Arabidopsis thaliana... 78 2e-026
gb|BP578758.1|BP578758 BP578758 RAFL14 Arabidopsis thaliana... 85 3e-026
gb|BP648411.1|BP648411 BP648411 RAFL19 Arabidopsis thaliana... 118 2e-025
gb|BP593704.1|BP593704 BP593704 RAFL15 Arabidopsis thaliana... 108 3e-025
gb|BP826835.1|BP826835 BP826835 RAFL19 Arabidopsis thaliana... 102 4e-025
gb|BP660581.1|BP660581 BP660581 RAFL21 Arabidopsis thaliana... 71 8e-024
gb|BP664156.1|BP664156 BP664156 RAFL21 Arabidopsis thaliana... 66 4e-023
gb|BP627571.1|BP627571 BP627571 RAFL17 Arabidopsis thaliana... 107 5e-022
>gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 3',
mRNA sequence
Length = 640
Score = 255 bits (552), Expect = 1e-066
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / -1
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 565 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 386
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 385 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 206
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 205 AGVVRQELAKLKKEITA* 152
Score = 162 bits (349), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / +3
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 156 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 335
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 336 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 515
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 516 SATLPISTYLLKPIFAA 566
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / -3
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 443 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 264
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 263 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 129
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / +2
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 317 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 496
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 497 IFSVVHKCYSPDLNVPL 547
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / +2
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 158 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 280
>gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 3',
mRNA sequence
Length = 599
Score = 255 bits (552), Expect = 1e-066
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / -3
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 543 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 364
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 363 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 184
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 183 AGVVRQELAKLKKEITA* 130
Score = 162 bits (349), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / +2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 134 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 313
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 314 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 493
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 494 SATLPISTYLLKPIFAA 544
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / -2
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 421 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 242
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 241 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 107
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / +1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 295 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 474
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 475 IFSVVHKCYSPDLNVPL 525
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / +1
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 136 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 258
>gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000B144Q 5-PRIME, mRNA sequence
Length = 596
Score = 255 bits (552), Expect = 1e-066
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / +3
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 36 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 215
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 216 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 395
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 396 AGVVRQELAKLKKEITA* 449
Score = 162 bits (349), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 445 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 266
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 265 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 86
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 85 SATLPISTYLLKPIFAA 35
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / +2
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 158 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 337
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 338 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 472
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 284 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 105
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 104 IFSVVHKCYSPDLNVPL 54
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -1
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 443 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 321
>gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 705
Score = 255 bits (552), Expect = 1e-066
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / +1
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 43 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 222
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 223 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 402
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 403 AGVVRQELAKLKKEITA* 456
Score = 162 bits (349), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 452 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 273
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 272 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 93
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 92 SATLPISTYLLKPIFAA 42
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / +3
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 165 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 344
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 345 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 479
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 291 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 112
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 111 IFSVVHKCYSPDLNVPL 61
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -1
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 450 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 328
>gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A16218
5-PRIME, mRNA sequence
Length = 630
Score = 255 bits (552), Expect = 1e-066
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 59 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 238
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 239 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 418
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 419 AGVVRQELAKLKKEITA* 472
Score = 162 bits (349), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / -1
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 468 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 289
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 288 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 109
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 108 SATLPISTYLLKPIFAA 58
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / +1
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 181 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 360
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 361 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 495
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / -3
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 307 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 128
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 127 IFSVVHKCYSPDLNVPL 77
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -3
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 466 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 344
>gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L04214
5-PRIME, mRNA sequence
Length = 604
Score = 255 bits (552), Expect = 1e-066
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 47 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 226
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 227 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 406
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 407 AGVVRQELAKLKKEITA* 460
Score = 162 bits (349), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 456 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 277
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 276 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 97
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 96 SATLPISTYLLKPIFAA 46
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / +1
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 169 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 348
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 349 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 483
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 295 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 116
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 115 IFSVVHKCYSPDLNVPL 65
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -1
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 454 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 332
>gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 619
Score = 255 bits (552), Expect = 1e-066
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / +1
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 55 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 234
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 235 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 414
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 415 AGVVRQELAKLKKEITA* 468
Score = 162 bits (349), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / -3
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 464 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 285
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 284 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 105
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 104 SATLPISTYLLKPIFAA 54
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / +3
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 177 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 356
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 357 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 491
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / -2
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 303 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 124
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 123 IFSVVHKCYSPDLNVPL 73
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -2
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 462 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 340
>ref|NM_118843.2| Arabidopsis thaliana structural constituent of ribosome AT4G27090
mRNA, complete cds
Length = 668
Score = 255 bits (552), Expect = 1e-066
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 56 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 235
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 236 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 415
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 416 AGVVRQELAKLKKEITA* 469
Score = 162 bits (349), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / -3
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 465 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 286
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 285 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 106
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 105 SATLPISTYLLKPIFAA 55
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / +1
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 178 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 357
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 358 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 492
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / -2
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 304 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 125
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 124 IFSVVHKCYSPDLNVPL 74
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -2
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 463 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 341
>gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 672
Score = 254 bits (550), Expect = 2e-066
Identities = 109/137 (79%), Positives = 122/137 (89%)
Frame = +2 / +1
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+MLA+IKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 449 GAIRQELSKLKKASTA* 499
G +RQEL+KLK+ A*
Sbjct: 412 GIVRQELAKLKREIAA* 462
Score = 166 bits (357), Expect = 8e-040
Identities = 83/148 (56%), Positives = 93/148 (62%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 458 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 279
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 278 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 99
Query: 135 RATRPISTNLLNGILAAVGEASGGAVKR 52
AT PISTNLL ILA + G V+R
Sbjct: 98 SATLPISTNLLKPILAG*KKQIGAIVRR 15
Score = 107 bits (228), Expect = 5e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / +3
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 165 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 344
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 345 EEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 461
Score = 88.1 bits (186), Expect(2) = 5e-025
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 118
Query: 154 XXXXVHKGHAPDLHEPL 104
V++ H+P+LHE L
Sbjct: 117 ILAVVNERHSPNLHESL 67
Score = 48.7 bits (100), Expect(2) = 5e-025
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / -1
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPVK+ E S LL N+
Sbjct: 438 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 334
>gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, complete sequence
Length = 628
Score = 254 bits (550), Expect = 2e-066
Identities = 109/137 (79%), Positives = 122/137 (89%)
Frame = +2 / +1
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+MLA+IKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 449 GAIRQELSKLKKASTA* 499
G +RQEL+KLK+ A*
Sbjct: 412 GIVRQELAKLKREIAA* 462
Score = 166 bits (357), Expect = 8e-040
Identities = 83/148 (56%), Positives = 93/148 (62%)
Frame = -1 / -3
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 458 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 279
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 278 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 99
Query: 135 RATRPISTNLLNGILAAVGEASGGAVKR 52
AT PISTNLL ILA + G V+R
Sbjct: 98 SATLPISTNLLKPILAG*KKQIGAIVRR 15
Score = 107 bits (228), Expect = 5e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / +3
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 165 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 344
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 345 EEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 461
Score = 88.1 bits (186), Expect(2) = 5e-025
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -3 / -2
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 118
Query: 154 XXXXVHKGHAPDLHEPL 104
V++ H+P+LHE L
Sbjct: 117 ILAVVNERHSPNLHESL 67
Score = 48.7 bits (100), Expect(2) = 5e-025
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / -2
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPVK+ E S LL N+
Sbjct: 438 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 334
>emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH2ZA05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 580
Score = 254 bits (550), Expect = 2e-066
Identities = 109/137 (79%), Positives = 122/137 (89%)
Frame = +2 / +2
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 26 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 205
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+MLA+IKR
Sbjct: 206 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 385
Query: 449 GAIRQELSKLKKASTA* 499
G +RQEL+KLK+ A*
Sbjct: 386 GIVRQELAKLKREIAA* 436
Score = 162 bits (349), Expect = 1e-038
Identities = 80/136 (58%), Positives = 88/136 (64%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 432 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 253
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 252 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 73
Query: 135 RATRPISTNLLNGILA 88
AT PISTNLL ILA
Sbjct: 72 SATLPISTNLLKPILA 25
Score = 107 bits (228), Expect = 5e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / +1
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 139 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 318
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 319 EEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 435
Score = 88.1 bits (186), Expect(2) = 5e-025
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 271 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 92
Query: 154 XXXXVHKGHAPDLHEPL 104
V++ H+P+LHE L
Sbjct: 91 ILAVVNERHSPNLHESL 41
Score = 48.7 bits (100), Expect(2) = 5e-025
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / -1
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPVK+ E S LL N+
Sbjct: 412 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 308
>ref|NM_127604.2| Arabidopsis thaliana structural constituent of ribosome AT2G20450
mRNA, complete cds
Length = 642
Score = 254 bits (550), Expect = 2e-066
Identities = 109/137 (79%), Positives = 122/137 (89%)
Frame = +2 / +1
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+MLA+IKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 449 GAIRQELSKLKKASTA* 499
G +RQEL+KLK+ A*
Sbjct: 412 GIVRQELAKLKREIAA* 462
Score = 166 bits (357), Expect = 8e-040
Identities = 83/148 (56%), Positives = 93/148 (62%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 458 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 279
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 278 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 99
Query: 135 RATRPISTNLLNGILAAVGEASGGAVKR 52
AT PISTNLL ILA + G V+R
Sbjct: 98 SATLPISTNLLKPILAG*KKQIGAIVRR 15
Score = 107 bits (228), Expect = 5e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / +3
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 165 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 344
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 345 EEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 461
Score = 88.1 bits (186), Expect(2) = 5e-025
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 118
Query: 154 XXXXVHKGHAPDLHEPL 104
V++ H+P+LHE L
Sbjct: 117 ILAVVNERHSPNLHESL 67
Score = 48.7 bits (100), Expect(2) = 5e-025
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / -1
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPVK+ E S LL N+
Sbjct: 438 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 334
>gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l14, mRNA sequence
Length = 647
Score = 254 bits (549), Expect = 3e-066
Identities = 109/138 (78%), Positives = 123/138 (89%)
Frame = +2 / -1
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 623 AAXMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 444
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 443 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 264
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 263 AGVVRQELAKLKKEITA* 210
Score = 162 bits (348), Expect = 1e-038
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -1 / +1
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 214 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 393
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 394 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 573
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL I AA
Sbjct: 574 SATLPISTYLLKPIXAA 624
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / -3
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 501 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 322
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 321 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 187
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / +3
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 375 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 554
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 555 IFSVVHKCYSPDLNVPL 605
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / +3
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 216 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 338
>gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-M06 5',
mRNA sequence
Length = 648
Score = 253 bits (546), Expect = 7e-066
Identities = 108/137 (78%), Positives = 121/137 (88%)
Frame = +2 / +2
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 53 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 232
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+ML +IKR
Sbjct: 233 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLXKIKRA 412
Query: 449 GAIRQELSKLKKASTA* 499
G +RQEL+KLK+ A*
Sbjct: 413 GIVRQELAKLKREIAA* 463
Score = 164 bits (353), Expect = 3e-039
Identities = 82/148 (55%), Positives = 92/148 (62%)
Frame = -1 / -1
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLIL +M LF TISFLPHELFSHL FTSA SI
Sbjct: 459 AAISLFSLASSCLTIPALLILXNMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 280
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 279 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 100
Query: 135 RATRPISTNLLNGILAAVGEASGGAVKR 52
AT PISTNLL ILA + G V+R
Sbjct: 99 SATLPISTNLLKPILAG*KKQIGAIVRR 16
Score = 107 bits (228), Expect = 5e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / +1
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 166 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 345
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 346 EEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 462
Score = 88.1 bits (186), Expect(2) = 4e-025
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -3 / -3
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 298 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 119
Query: 154 XXXXVHKGHAPDLHEPL 104
V++ H+P+LHE L
Sbjct: 118 ILAVVNERHSPNLHESL 68
Score = 49.2 bits (101), Expect(2) = 4e-025
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / -3
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPVK+ E S LL N+
Sbjct: 439 LSKLLPHNTSPLDFXQHDLEPVKIIEGSSSLLHNK 335
>gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768M238Q 5-PRIME, mRNA sequence
Length = 611
Score = 252 bits (545), Expect = 9e-066
Identities = 108/137 (78%), Positives = 122/137 (89%)
Frame = +2 / +1
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKRFVEIGRVALVNYG+DYG+LVVIV+VVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 1 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVNVVDQNRALVDAPDMERIQMNLKRLSLTDI 180
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+MLA+IKR
Sbjct: 181 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 360
Query: 449 GAIRQELSKLKKASTA* 499
G +RQEL+KLK+ A*
Sbjct: 361 GIVRQELAKLKREIAA* 411
Score = 160 bits (344), Expect = 5e-038
Identities = 79/135 (58%), Positives = 87/135 (64%)
Frame = -1 / -1
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 407 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 228
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 227 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTLTITTSFP*SSP*LT 48
Query: 135 RATRPISTNLLNGIL 91
AT PISTNLL IL
Sbjct: 47 SATLPISTNLLKPIL 3
Score = 105 bits (224), Expect = 2e-021
Identities = 47/99 (47%), Positives = 63/99 (63%)
Frame = +1 / +3
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 114 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 293
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
+E+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 294 KEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 410
Score = 88.1 bits (186), Expect(2) = 5e-025
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -3 / -3
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 246 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 67
Query: 154 XXXXVHKGHAPDLHEPL 104
V++ H+P+LHE L
Sbjct: 66 ILAVVNERHSPNLHESL 16
Score = 48.7 bits (100), Expect(2) = 5e-025
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / -3
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPVK+ E S LL N+
Sbjct: 387 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 283
>gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 436
Score = 252 bits (544), Expect = 1e-065
Identities = 108/135 (80%), Positives = 120/135 (88%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI I
Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 180
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+MLA+IKR G
Sbjct: 181 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 360
Query: 455 IRQELSKLKKASTA* 499
+RQEL+KLK+ A*
Sbjct: 361 VRQELAKLKREIAA* 405
Score = 158 bits (339), Expect = 2e-037
Identities = 77/131 (58%), Positives = 85/131 (64%)
Frame = -1 / -3
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 401 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 222
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 221 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 42
Query: 135 RATRPISTNLL 103
AT PISTNLL
Sbjct: 41 SATLPISTNLL 9
Score = 107 bits (228), Expect = 5e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / +3
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 108 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 287
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 288 EEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 404
Score = 88.1 bits (186), Expect(2) = 5e-025
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -3 / -2
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 240 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 61
Query: 154 XXXXVHKGHAPDLHEPL 104
V++ H+P+LHE L
Sbjct: 60 ILAVVNERHSPNLHESL 10
Score = 48.7 bits (100), Expect(2) = 5e-025
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / -2
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPVK+ E S LL N+
Sbjct: 381 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 277
>emb|AX506868.1| Sequence 1563 from Patent WO0216655
Length = 405
Score = 252 bits (544), Expect = 1e-065
Identities = 108/135 (80%), Positives = 120/135 (88%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI I
Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 180
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+MLA+IKR G
Sbjct: 181 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 360
Query: 455 IRQELSKLKKASTA* 499
+RQEL+KLK+ A*
Sbjct: 361 VRQELAKLKREIAA* 405
Score = 158 bits (339), Expect = 2e-037
Identities = 77/131 (58%), Positives = 85/131 (64%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 401 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 222
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 221 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 42
Query: 135 RATRPISTNLL 103
AT PISTNLL
Sbjct: 41 SATLPISTNLL 9
Score = 107 bits (228), Expect = 5e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / +3
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 108 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 287
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 288 EEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 404
Score = 88.1 bits (186), Expect(2) = 5e-025
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 240 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 61
Query: 154 XXXXVHKGHAPDLHEPL 104
V++ H+P+LHE L
Sbjct: 60 ILAVVNERHSPNLHESL 10
Score = 48.7 bits (100), Expect(2) = 5e-025
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / -1
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPVK+ E S LL N+
Sbjct: 381 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 277
>gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 405
Score = 251 bits (542), Expect = 2e-065
Identities = 107/135 (79%), Positives = 121/135 (89%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI I
Sbjct: 1 MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 180
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+ G
Sbjct: 181 DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 360
Query: 455 IRQELSKLKKASTA* 499
+RQEL+KLKK TA*
Sbjct: 361 VRQELAKLKKEITA* 405
Score = 158 bits (339), Expect = 2e-037
Identities = 76/131 (58%), Positives = 83/131 (63%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 401 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 222
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 221 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 42
Query: 135 RATRPISTNLL 103
AT PIST LL
Sbjct: 41 SATLPISTYLL 9
Score = 110 bits (234), Expect = 7e-023
Identities = 52/97 (53%), Positives = 63/97 (64%)
Frame = +1 / +3
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 114 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 293
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
G L* VQ H G+DQE WC QARA + +EG HCL
Sbjct: 294 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCL 404
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 240 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 61
Query: 154 XXXXVHKGHAPDLHEPL 104
VHK ++PDL+ PL
Sbjct: 60 IFSVVHKCYSPDLNVPL 10
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -1
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 399 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 277
>gb|CB254828.1|CB254828 58-E018361-019-007-C16-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768C167Q 5-PRIME, mRNA sequence
Length = 541
Score = 241 bits (521), Expect = 2e-062
Identities = 103/138 (74%), Positives = 119/138 (86%)
Frame = +2 / +3
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA M FKR+VEIGRVALVNYG+D+G+LV IV++VD NRALVDAPDM R Q+NFKRLSLTD
Sbjct: 48 AANMGFKRYVEIGRVALVNYGEDHGKLVAIVNIVDHNRALVDAPDMERIQMNFKRLSLTD 227
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
I IDI RVPKK LI AME+ADVK KWE SSWG+KLI+QKRRA L+ FDRFK+MLA+IK+
Sbjct: 228 IVIDINRVPKKKALIDAMEKADVKNKWEKSSWGRKLIMQKRRANLNYFDRFKIMLAKIKK 407
Query: 446 GGAIRQELSKLKKASTA* 499
G +RQEL+KLKK TA*
Sbjct: 408 AGVVRQELAKLKKEITA* 461
Score = 153 bits (328), Expect = 8e-036
Identities = 76/137 (55%), Positives = 84/137 (61%)
Frame = -1 / -1
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F ISFLPHELFSHL FTSA SI
Sbjct: 457 AVISFLSFASSCLTTPAFLILANMILNLSK*LRLALRFCMISFLPHELFSHLFFTSAFSI 278
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST AL W P*S P*FT
Sbjct: 277 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALLWSTMLTIATSFP*SSP*FT 98
Query: 135 RATRPISTNLLNGILAA 85
AT PIST LL + AA
Sbjct: 97 SATLPISTYLLKPMFAA 47
>gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 5',
mRNA sequence
Length = 677
Score = 241 bits (520), Expect = 3e-062
Identities = 103/129 (79%), Positives = 116/129 (89%)
Frame = +2 / +1
Query: 113 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVP 292
VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVP
Sbjct: 85 VEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVP 264
Query: 293 KKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELS 472
KK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+ G +RQEL+
Sbjct: 265 KKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELA 444
Query: 473 KLKKASTA* 499
KLKK TA*
Sbjct: 445 KLKKEITA* 471
Score = 155 bits (333), Expect = 2e-036
Identities = 74/128 (57%), Positives = 81/128 (63%)
Frame = -1 / -1
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 467 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 288
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 287 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 108
Query: 135 RATRPIST 112
AT PIST
Sbjct: 107 SATLPIST 84
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / +3
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 180 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 359
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 360 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 494
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = -3 / -3
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 306 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 127
Query: 154 XXXXVHKGHAPDLH 113
VHK ++PDL+
Sbjct: 126 IFSVVHKCYSPDLN 85
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -3
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 465 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 343
>gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 5',
mRNA sequence
Length = 617
Score = 241 bits (520), Expect = 3e-062
Identities = 103/129 (79%), Positives = 116/129 (89%)
Frame = +2 / +3
Query: 113 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVP 292
VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVP
Sbjct: 81 VEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVP 260
Query: 293 KKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELS 472
KK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+ G +RQEL+
Sbjct: 261 KKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELA 440
Query: 473 KLKKASTA* 499
KLKK TA*
Sbjct: 441 KLKKEITA* 467
Score = 155 bits (333), Expect = 2e-036
Identities = 74/128 (57%), Positives = 81/128 (63%)
Frame = -1 / -2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 463 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 284
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 283 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 104
Query: 135 RATRPIST 112
AT PIST
Sbjct: 103 SATLPIST 80
Score = 110 bits (235), Expect = 5e-023
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = +1 / +2
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 176 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 355
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLS 501
G L* VQ H G+DQE WC QARA + +EG HCL+
Sbjct: 356 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLT 469
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = -3 / -1
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS H LDQ LL T DVN ++GK +P EV+L P HIRG+H+ VLV+++
Sbjct: 302 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 123
Query: 154 XXXXVHKGHAPDLH 113
VHK ++PDL+
Sbjct: 122 IFSVVHKCYSPDLN 81
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -3 / -1
Query: 493 SGRLLQLGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
S LL+ +LLPD+T+ LD QHDLEP+KV + SP L ++
Sbjct: 461 SDLLLEFCKLLPDNTSFLDLGQHDLEPIKVVKVSPTFLHDK 339
>gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I19217
5-PRIME, mRNA sequence
Length = 441
Score = 240 bits (518), Expect = 5e-062
Identities = 103/130 (79%), Positives = 115/130 (88%)
Frame = +2 / +3
Query: 110 FVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRV 289
FVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI IDI RV
Sbjct: 3 FVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRV 182
Query: 290 PKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQEL 469
PKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+D DRFK+MLA+IKR G +RQEL
Sbjct: 183 PKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDXDRFKIMLAKIKRAGIVRQEL 362
Query: 470 SKLKKASTA* 499
+KLK+ A*
Sbjct: 363 AKLKREIAA* 392
Score = 154 bits (331), Expect = 3e-036
Identities = 76/129 (58%), Positives = 84/129 (65%)
Frame = -1 / -3
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 388 AAISLFSLASSCLTIPALLILANMILNLSXSLRAALLFCTISFLPHELFSHLFFTSAFSI 209
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T
Sbjct: 208 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 29
Query: 135 RATRPISTN 109
AT PISTN
Sbjct: 28 SATLPISTN 2
Score = 106 bits (227), Expect = 7e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / +2
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 95 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 274
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 275 EEKSCPQ*X*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 391
Score = 86.8 bits (183), Expect(2) = 8e-024
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = -3 / -2
Query: 334 HISFLHSLDQG*LLGDTFDVNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHIXXXXXXXX 155
HIS LH L+Q LLG++ D+N DV K +P +++L H+RG+HKCPVLVD+I
Sbjct: 227 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 48
Query: 154 XXXXVHKGHAPDLHE 110
V++ H+P+LHE
Sbjct: 47 ILAVVNERHSPNLHE 3
Score = 46.0 bits (94), Expect(2) = 8e-024
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -3 / -2
Query: 475 LGELLPDSTTPLDPCQHDLEPVKVTECSPPLLDNQ 371
L +LLP +T+PLD QHDLEPV + E S LL N+
Sbjct: 368 LSKLLPHNTSPLDFGQHDLEPVXIIEGSSSLLHNK 264
>gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB086g02F 3', mRNA sequence
Length = 512
Score = 237 bits (511), Expect = 5e-061
Identities = 101/127 (79%), Positives = 114/127 (89%)
Frame = +2 / -2
Query: 119 IGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKK 298
IGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVPKK
Sbjct: 511 IGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKK 332
Query: 299 STLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELSKL 478
LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+ G +RQEL+KL
Sbjct: 331 KALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKL 152
Query: 479 KKASTA* 499
KK TA*
Sbjct: 151 KKEITA* 131
Score = 151 bits (324), Expect = 3e-035
Identities = 72/126 (57%), Positives = 79/126 (62%)
Frame = -1 / +3
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 135 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 314
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FT 136
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT
Sbjct: 315 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 494
Query: 135 RATRPI 118
AT PI
Sbjct: 495 SATLPI 512
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / -1
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 422 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 243
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 242 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 108
>gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 397
Score = 227 bits (490), Expect = 4e-058
Identities = 96/118 (81%), Positives = 108/118 (91%)
Frame = +2 / +1
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 43 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 222
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARI 439
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+I
Sbjct: 223 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKI 396
Score = 142 bits (304), Expect = 2e-032
Identities = 69/118 (58%), Positives = 75/118 (63%)
Frame = -1 / -3
Query: 438 ILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSV 259
ILA+M F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +SV
Sbjct: 395 ILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 216
Query: 258 SESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
++ LK IW L+ISGAST ALFW P*S P*FT AT PIST LL I AA
Sbjct: 215 RDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 42
>emb|BX826370.1|CNS0A41L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB1ZE11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 583
Score = 141 bits (303), Expect(2) = 3e-057
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = +2 / +1
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVD NRALVDAPDM R Q+NFKRLSLTD
Sbjct: 52 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDHNRALVDAPDMERIQMNFKRLSLTD 231
Query: 266 IKIDIKRVPKKSTLIK 313
I IDI RVPKK LI+
Sbjct: 232 IVIDINRVPKKKALIE 279
Score = 103 bits (219), Expect(2) = 3e-057
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +2 / +3
Query: 332 VKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELSKLKKASTA* 499
VK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+ G +RQEL+KLKK TA*
Sbjct: 303 VKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA* 470
Score = 90.9 bits (192), Expect(2) = 6e-032
Identities = 44/82 (53%), Positives = 51/82 (62%)
Frame = -1 / -3
Query: 330 SASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*S 151
S ++ IK F GTRLMS+ +SV ++ LK IW L+ISGAST AL W P*S
Sbjct: 296 SLFALRSIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALLWSTTSTITTSFP*S 117
Query: 150 LP*FTRATRPISTNLLNGILAA 85
P*FT AT PIST LL I AA
Sbjct: 116 SP*FTSATLPISTYLLKPIFAA 51
Score = 69.3 bits (145), Expect(2) = 6e-032
Identities = 32/58 (55%), Positives = 35/58 (60%)
Frame = -1 / -1
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSAS 322
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA+
Sbjct: 466 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAA 293
>gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-42-L13 5',
mRNA sequence
Length = 407
Score = 221 bits (478), Expect = 2e-056
Identities = 94/118 (79%), Positives = 106/118 (89%)
Frame = +2 / +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 53 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 232
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARI 439
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+D DRFK+M A+I
Sbjct: 233 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDLDRFKIMSAKI 406
Score = 141 bits (303), Expect = 2e-032
Identities = 69/118 (58%), Positives = 74/118 (62%)
Frame = -1 / -3
Query: 438 ILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSV 259
ILA M F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +SV
Sbjct: 405 ILADMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 226
Query: 258 SESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
++ LK IW L+ISGAST ALFW P*S P*FT AT PIST LL I AA
Sbjct: 225 RDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 52
>gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-76-N21 5',
mRNA sequence
Length = 386
Score = 121 bits (259), Expect(2) = 3e-056
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +2 / +2
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 14 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 193
Score = 120 bits (256), Expect(2) = 3e-056
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = +2 / +3
Query: 272 IDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGG 451
IDI RVPKK LI+AME+ADVK KWE SSWG+K IVQKRRAAL+DFDRFK+MLA+IKR G
Sbjct: 198 IDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKFIVQKRRAALNDFDRFKIMLAKIKRAG 377
Query: 452 AIR 460
+R
Sbjct: 378 IVR 386
Score = 75.8 bits (159), Expect(2) = 6e-029
Identities = 35/60 (58%), Positives = 39/60 (65%)
Frame = -1 / -3
Query: 267 MSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILA 88
MSV ++ K IW L++SGASTSALFW P*S P* T AT PISTNLL ILA
Sbjct: 192 MSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPILA 13
Score = 74.4 bits (156), Expect(2) = 6e-029
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = -1 / -2
Query: 459 LIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRL 280
L P LLILA+M LF TI+FLPHELFSHL FTSA SIA IK FLGT L
Sbjct: 385 LTIPALLILANMILNLSKSLRAALLFCTINFLPHELFSHLFFTSAFSIASIKTFFLGTLL 206
Query: 279 MSI 271
+S+
Sbjct: 205 ISM 197
>gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-A08 5',
mRNA sequence
Length = 397
Score = 221 bits (476), Expect = 3e-056
Identities = 93/114 (81%), Positives = 104/114 (91%)
Frame = +2 / +3
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 51 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 230
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVM 427
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+M
Sbjct: 231 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIM 392
Score = 138 bits (296), Expect(2) = 4e-034
Identities = 65/100 (65%), Positives = 70/100 (70%)
Frame = -1 / -1
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +SV ++ LK IW L+ISGAST
Sbjct: 349 FCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGAST 170
Query: 204 SALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
ALFW P*S P*FT AT PIST LL I AA
Sbjct: 169 KALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 50
Score = 29.0 bits (57), Expect(2) = 4e-034
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3 / -3
Query: 427 HDLEPVKVTECSPPLLDNQ 371
HDLEP+KV + SP L ++
Sbjct: 392 HDLEPIKVVKVSPTFLHDK 336
>gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-54-O16 5',
mRNA sequence
Length = 387
Score = 216 bits (467), Expect = 5e-055
Identities = 92/110 (83%), Positives = 100/110 (90%)
Frame = +2 / +2
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 56 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 235
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRF 418
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRF
Sbjct: 236 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRF 385
Score = 140 bits (300), Expect = 6e-032
Identities = 67/111 (60%), Positives = 75/111 (67%)
Frame = -1 / -1
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F TISFLPHELFSHL FTSA SIA IK FLGT L+S+ MSV ++ K IW L++SGAST
Sbjct: 351 FCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGAST 172
Query: 204 SALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAAVGEASGGAVKR 52
SALFW P*S P* T AT PISTNLL ILA + G V+R
Sbjct: 171 SALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPILAG*KKQIGAIVRR 19
>gb|BP845987.1|BP845987 BP845987 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-G23 5',
mRNA sequence
Length = 404
Score = 214 bits (461), Expect = 4e-054
Identities = 91/118 (77%), Positives = 103/118 (87%)
Frame = +2 / +3
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R Q+NFKRLSLTD
Sbjct: 51 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLTD 230
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARI 439
I IDI RVPKK I+AME+ADVK KWE SSWG+KLIVQKRRA L+D DRFK+M +I
Sbjct: 231 IVIDINRVPKKKAWIEAMEKADVKNKWEKSSWGRKLIVQKRRAKLNDLDRFKIMWDKI 404
Score = 138 bits (296), Expect = 2e-031
Identities = 67/118 (56%), Positives = 74/118 (62%)
Frame = -1 / -2
Query: 438 ILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSV 259
IL+ M F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV
Sbjct: 403 ILSHMILNLSKSLSLALRFCTISFLPHELFSHLFFTSAFSIASIQAFFFGTRLMSMTISV 224
Query: 258 SESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
++ LK IW L+ISGAST ALFW P*S P*FT AT PIST LL I AA
Sbjct: 223 RDNLLKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 50
>gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-87-E19 5',
mRNA sequence
Length = 385
Score = 209 bits (451), Expect = 9e-053
Identities = 89/110 (80%), Positives = 99/110 (90%)
Frame = +2 / +3
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 51 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 230
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDR 415
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+D DR
Sbjct: 231 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDLDR 380
Score = 138 bits (296), Expect = 2e-031
Identities = 65/100 (65%), Positives = 70/100 (70%)
Frame = -1 / -1
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +SV ++ LK IW L+ISGAST
Sbjct: 349 FCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGAST 170
Query: 204 SALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
ALFW P*S P*FT AT PIST LL I AA
Sbjct: 169 KALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 50
>emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZH01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 586
Score = 209 bits (450), Expect = 1e-052
Identities = 90/120 (75%), Positives = 101/120 (84%)
Frame = +2 / +2
Query: 101 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDI 280
FKRFV IG VALVNYG+DYG+LVVIVDVVDQNRALVDAP M + Q+NFKR LTDI I I
Sbjct: 5 FKRFVGIGGVALVNYGEDYGKLVVIVDVVDQNRALVDAP*MEKIQMNFKRFFLTDIVIYI 184
Query: 281 KRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIR 460
RVPKK I AME+ADVK KWE SSWG+KLI QK+RAAL+DFDRFK+MLA+IKR G +R
Sbjct: 185 NRVPKKKVFI*AMEKADVKNKWEKSSWGRKLIFQKKRAALNDFDRFKIMLAKIKRAGILR 364
Score = 128 bits (274), Expect = 2e-028
Identities = 66/127 (51%), Positives = 75/127 (59%)
Frame = -1 / -2
Query: 483 FFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIK 304
F + ++ L P LLILA+M F ISFLPHELFSHL TSA SIA IK
Sbjct: 387 FLA*QAPVLKIPALLILANMILNLSKSLRAALFF*KISFLPHELFSHLFLTSAFSIA*IK 208
Query: 303 VDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATR 124
FLGT L+ + MSV ++ LK IW +I GASTSALFW P*S P* T AT
Sbjct: 207 TFFLGTLLI*MTMSVRKNLLKFIWIFSI*GASTSALFWSTTSTITTSFP*SSP*LTSATP 28
Query: 123 PISTNLL 103
PI TNLL
Sbjct: 27 PIPTNLL 7
>gb|BP800136.1|BP800136 BP800136 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-14-A17 5',
mRNA sequence
Length = 408
Score = 200 bits (431), Expect(2) = 1e-052
Identities = 84/108 (77%), Positives = 96/108 (88%)
Frame = +2 / +1
Query: 122 GRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKKS 301
G +ALVNYG+ +G+LVVIVDVVDQ RALVDAPDM R Q+NFKRLSLTDI IDI RVPKK
Sbjct: 85 GELALVNYGEHHGKLVVIVDVVDQKRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKK 264
Query: 302 TLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 265 ALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 408
Score = 127 bits (271), Expect = 6e-028
Identities = 60/107 (56%), Positives = 67/107 (62%)
Frame = -1 / -2
Query: 441 LILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMS 262
LILA+M F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +S
Sbjct: 404 LILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTIS 225
Query: 261 VSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRP 121
V ++ LK IW L+ISGAST ALFW P* P*FT A+ P
Sbjct: 224 VRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*CSP*FTSASSP 84
Score = 29.0 bits (57), Expect(2) = 1e-052
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 86 AARMPFKRFVEIGRVA 133
AA+M FKR+VEIGR +
Sbjct: 48 AAKMGFKRYVEIGRAS 95
>gb|BP863509.1|BP863509 BP863509 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-66-P15 5',
mRNA sequence
Length = 407
Score = 123 bits (263), Expect(2) = 8e-052
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = +2 / +3
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R ++NFKRLSLTD
Sbjct: 48 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIKMNFKRLSLTD 227
Query: 266 IKIDI 280
I IDI
Sbjct: 228 IVIDI 242
Score = 103 bits (219), Expect(2) = 8e-052
Identities = 41/54 (75%), Positives = 48/54 (88%)
Frame = +2 / +2
Query: 284 RVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
RVPKK LI+ ME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+
Sbjct: 245 RVPKKKALIEEMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 406
Score = 73.0 bits (153), Expect(2) = 2e-025
Identities = 36/66 (54%), Positives = 42/66 (63%)
Frame = -1 / -2
Query: 282 LMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLL 103
+MS+ +SV ++ LK I L+ISGAST ALFW P*S P*FT AT PIST LL
Sbjct: 244 VMSMTISVRDNLLKFILILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLL 65
Query: 102 NGILAA 85
I AA
Sbjct: 64 KPIFAA 47
Score = 65.2 bits (136), Expect(2) = 2e-025
Identities = 31/53 (58%), Positives = 33/53 (62%)
Frame = -1 / -3
Query: 441 LILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTR 283
LILA+M F TISFLPHELFSHL FTSA SI+ IK F GTR
Sbjct: 402 LILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSISSIKAFFFGTR 244
>gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-45-P07 5',
mRNA sequence
Length = 374
Score = 204 bits (440), Expect = 3e-051
Identities = 87/108 (80%), Positives = 97/108 (89%)
Frame = +2 / +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R Q+NFKRLSLTD
Sbjct: 50 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLTD 229
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDF 409
I IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DF
Sbjct: 230 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 373
Score = 138 bits (296), Expect = 2e-031
Identities = 65/100 (65%), Positives = 70/100 (70%)
Frame = -1 / -3
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +SV ++ LK IW L+ISGAST
Sbjct: 348 FCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGAST 169
Query: 204 SALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
ALFW P*S P*FT AT PIST LL I AA
Sbjct: 168 QALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 49
>gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-G07 5',
mRNA sequence
Length = 393
Score = 179 bits (386), Expect(2) = 8e-051
Identities = 75/100 (75%), Positives = 87/100 (87%)
Frame = +2 / +2
Query: 149 KDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKKSTLIKAMEEA 328
+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI IDI RVPKK I+AME+A
Sbjct: 80 EDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVWIEAMEKA 259
Query: 329 DVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
DVK KWE SSWG+KL+V+KRRAAL+DFDRFK+ML + + G
Sbjct: 260 DVKNKWEKSSWGRKLMVKKRRAALNDFDRFKIMLGQNQEG 379
Score = 108 bits (230), Expect(3) = 4e-029
Identities = 48/78 (61%), Positives = 56/78 (71%)
Frame = -1 / -1
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F+TISFLPHELFSHL FTSA SIA I+ FLGT L+S+ MSV ++ K IW L++SGAST
Sbjct: 315 FFTISFLPHELFSHLFFTSAFSIASIQTFFLGTLLISMTMSVRDNLFKFIWILSMSGAST 136
Query: 204 SALFWXXXXXXXXXRP*S 151
SALFW P*S
Sbjct: 135 SALFWSTTSTITTSFP*S 82
Score = 43.7 bits (89), Expect(2) = 8e-051
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2 / +1
Query: 89 ARMPFKRFVEIGRVALVNYGK 151
A+M FKRFVE+GRVALVNYG+
Sbjct: 19 AKMGFKRFVEMGRVALVNYGR 81
Score = 31.8 bits (63), Expect(3) = 4e-029
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1 / -2
Query: 147 P*FTRATRPISTNLLNGILA 88
P* T AT PISTNLL ILA
Sbjct: 77 P*LTSATLPISTNLLKPILA 18
Score = 28.6 bits (56), Expect(3) = 4e-029
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3 / -3
Query: 430 QHDLEPVKVTECSPPLLDNQ 371
+HDLEPVK+ E S LL ++
Sbjct: 361 EHDLEPVKIIEGSSSLLHHK 302
>gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-G16 5',
mRNA sequence
Length = 384
Score = 202 bits (435), Expect = 1e-050
Identities = 86/107 (80%), Positives = 96/107 (89%)
Frame = +2 / +1
Query: 83 TAARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLT 262
TAA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R Q+NFKRLSLT
Sbjct: 49 TAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLT 228
Query: 263 DIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALS 403
DI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+
Sbjct: 229 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRATLT 369
Score = 140 bits (300), Expect = 6e-032
Identities = 66/101 (65%), Positives = 71/101 (70%)
Frame = -1 / -2
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +SV ++ LK IW L+ISGAST
Sbjct: 350 FCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGAST 171
Query: 204 SALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAAV 82
ALFW P*S P*FT AT PIST LL I AAV
Sbjct: 170 QALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAV 48
>gb|BP845942.1|BP845942 BP845942 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-E19 5',
mRNA sequence
Length = 407
Score = 133 bits (285), Expect(2) = 2e-050
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +2 / +3
Query: 221 MVRCQINFKRLSLTDIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAAL 400
M R Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L
Sbjct: 189 MERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANL 368
Query: 401 SDFDRFKVMLARI 439
+DFDRFK+M A+I
Sbjct: 369 NDFDRFKIMWAKI 407
Score = 88.6 bits (187), Expect(2) = 2e-050
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = +2 / +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP 217
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAP
Sbjct: 53 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAP 184
Score = 87.7 bits (185), Expect(2) = 9e-027
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / -2
Query: 438 ILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSV 259
ILA M F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +SV
Sbjct: 406 ILAHMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 227
Query: 258 SESRLKLIWHLTI 220
++ LK IW L+I
Sbjct: 226 RDNLLKFIWILSI 188
Score = 55.1 bits (114), Expect(2) = 9e-027
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = -1 / -3
Query: 219 SGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
+GAST ALFW P*S P*FT AT PIST LL I AA
Sbjct: 186 AGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 52
>gb|BP864372.1|BP864372 BP864372 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-A16 5',
mRNA sequence
Length = 389
Score = 115 bits (246), Expect(2) = 3e-050
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +2 / +3
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R Q+NFKRLSLT
Sbjct: 48 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLTI 227
Query: 266 IKI 274
+ +
Sbjct: 228 LSL 236
Score = 105 bits (225), Expect(2) = 3e-050
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = +2 / +2
Query: 263 DIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVM 427
DI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+M
Sbjct: 224 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIM 388
Score = 72.1 bits (151), Expect(3) = 1e-029
Identities = 34/59 (57%), Positives = 37/59 (62%)
Frame = -1 / -2
Query: 261 VSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
V ++ LK IW L+ISGAST ALFW P*S P*FT AT PIST LL I AA
Sbjct: 223 VRDNLLKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 47
Score = 69.3 bits (145), Expect(3) = 1e-029
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / -3
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMS 262
F TISFLPHELFSHL FTSA SIA IK F GTRLMS+ +S
Sbjct: 345 FCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTIS 223
Score = 29.0 bits (57), Expect(3) = 1e-029
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3 / -2
Query: 427 HDLEPVKVTECSPPLLDNQ 371
HDLEP+KV + SP L ++
Sbjct: 388 HDLEPIKVVKVSPTFLHDK 332
>gb|BP843110.1|BP843110 BP843110 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-56-P11 5',
mRNA sequence
Length = 396
Score = 200 bits (432), Expect = 4e-050
Identities = 86/112 (76%), Positives = 97/112 (86%)
Frame = +2 / +2
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M FKR+VEIGRVALVN G+D+G+LVVIVDVVDQNRA VDAPDM R Q+NFKRLSLTDI
Sbjct: 59 AKMGFKRYVEIGRVALVN*GEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLTDI 238
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKV 424
IDI RVPKK I+A E+ADVK KWE SSWG+KLIVQKRRA L+D DRFK+
Sbjct: 239 VIDINRVPKKKAWIEAREKADVKNKWEKSSWGRKLIVQKRRANLNDLDRFKI 394
Score = 133 bits (286), Expect = 5e-030
Identities = 62/99 (62%), Positives = 69/99 (69%)
Frame = -1 / -1
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F TISFLPHELFSHL FTSA S+A I+ F GTRLMS+ +SV ++ LK IW L+ISGAST
Sbjct: 354 FCTISFLPHELFSHLFFTSAFSLASIQAFFFGTRLMSMTISVRDNLLKFIWILSISGAST 175
Query: 204 SALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILA 88
ALFW P*S P*FT AT PIST LL I A
Sbjct: 174 QALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 58
>gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-74-O20 5',
mRNA sequence
Length = 381
Score = 199 bits (429), Expect = 9e-050
Identities = 85/107 (79%), Positives = 96/107 (89%)
Frame = +2 / +1
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVN+G+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 55 AAKMGFKRYVEIGRVALVNHGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 234
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSD 406
I IDI RVPKK I+AME+ADVK KWE SSWG+KLIVQKRRA L+D
Sbjct: 235 IVIDINRVPKKKAWIEAMEKADVKNKWEKSSWGRKLIVQKRRANLND 375
Score = 134 bits (287), Expect = 4e-030
Identities = 63/100 (63%), Positives = 69/100 (69%)
Frame = -1 / -2
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV ++ LK IW L+ISGAST
Sbjct: 353 FCTISFLPHELFSHLFFTSAFSIASIQAFFFGTRLMSMTISVRDNLLKFIWILSISGAST 174
Query: 204 SALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
ALFW P*S P FT AT PIST LL I AA
Sbjct: 173 KALFWSTTSTITTSFP*SSPWFTSATLPISTYLLKPIFAA 54
>gb|T22860.1|T22860 4868 Lambda-PRL2 Arabidopsis thaliana cDNA clone 107M11T7, mRNA
sequence
Length = 449
Score = 194 bits (419), Expect = 2e-048
Identities = 84/105 (80%), Positives = 92/105 (87%)
Frame = +2 / +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R +NFKRLSLTD
Sbjct: 26 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIXMNFKRLSLTD 205
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAAL 400
I IDI RVPKK LI+AM ADVK KWE SSWG+KLIVQKRRA L
Sbjct: 206 IVIDINRVPKKKALIEAMXXADVKNKWEKSSWGRKLIVQKRRANL 340
Score = 131 bits (280), Expect = 3e-029
Identities = 62/100 (62%), Positives = 67/100 (67%)
Frame = -1 / -3
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGAST 205
F TISFLPHELFSHL TSA IA IK F GTRLMS+ +SV ++ LK W L+ISGAST
Sbjct: 324 FCTISFLPHELFSHLFXTSAFXIASIKAFFFGTRLMSMTISVRDNLLKFXWILSISGAST 145
Query: 204 SALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILAA 85
ALFW P*S P*FT AT PIST LL I AA
Sbjct: 144 KALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 25
>gb|BP856452.1|BP856452 BP856452 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-30-A19 5',
mRNA sequence
Length = 415
Score = 135 bits (289), Expect(3) = 4e-048
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +2 / +1
Query: 233 QINFKRLSLTDIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFD 412
Q+NFKRLSLTDI IDI RVPKK I+AME+ADVK KWE SSWG+KLIVQKRRA L+DFD
Sbjct: 193 QMNFKRLSLTDIVIDINRVPKKKASIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFD 372
Query: 413 RFKVMLARIKRGG 451
RFK+MLA IK+ G
Sbjct: 373 RFKIMLANIKKAG 411
Score = 69.3 bits (145), Expect(3) = 4e-048
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +2 / +3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQ 193
A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVD+
Sbjct: 51 AKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDR 155
Score = 28.1 bits (55), Expect(3) = 4e-048
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 191 QNRALVDAPDMVR 229
QNR LVDAPDM R
Sbjct: 152 QNRGLVDAPDMER 190
>gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB033c09F 3', mRNA sequence
Length = 476
Score = 192 bits (414), Expect = 1e-047
Identities = 82/105 (78%), Positives = 92/105 (87%)
Frame = +2 / -2
Query: 185 VDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWG 364
VDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG
Sbjct: 475 VDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWG 296
Query: 365 KKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELSKLKKASTA* 499
+KLIVQKRRA L+DFDRFK+MLA+IK+ G +RQEL+KLKK TA*
Sbjct: 295 RKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA* 161
Score = 131 bits (280), Expect = 3e-029
Identities = 61/102 (59%), Positives = 68/102 (66%)
Frame = -1 / +3
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 165 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 344
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFW 190
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW
Sbjct: 345 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFW 470
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / -1
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 452 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 273
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 272 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 138
>gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-06-J22 3',
mRNA sequence
Length = 445
Score = 192 bits (414), Expect = 1e-047
Identities = 82/105 (78%), Positives = 92/105 (87%)
Frame = +2 / -2
Query: 185 VDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWG 364
VDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG
Sbjct: 444 VDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWG 265
Query: 365 KKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELSKLKKASTA* 499
+KLIVQKRRA L+DFDRFK+MLA+IK+ G +RQEL+KLKK TA*
Sbjct: 264 RKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA* 130
Score = 131 bits (280), Expect = 3e-029
Identities = 61/102 (59%), Positives = 68/102 (66%)
Frame = -1 / +2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
AV +F S SSCL P LILA+M F TISFLPHELFSHL FTSA SI
Sbjct: 134 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 313
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFW 190
A IK F GTRLMS+ +SV ++ LK IW L+ISGAST ALFW
Sbjct: 314 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFW 439
Score = 113 bits (241), Expect = 8e-024
Identities = 53/105 (50%), Positives = 66/105 (62%)
Frame = +1 / -1
Query: 208 GRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCPEE 387
G P*YG+ PD LQ ++YR+ *HQ C +E D+G G *CE+ VGE+LMG EA E
Sbjct: 421 GCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EAYRAET 242
Query: 388 EGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCLSPFWWMTC 522
G L* VQ H G+DQE WC QARA + +EG HCL ++ C
Sbjct: 241 *G*P*RL**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFC 107
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial
sequence (ESSA project)
Length = 45980
Score = 81.7 bits (172), Expect(4) = 1e-047
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2 / -3
Query: 326 ADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIK 442
ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK
Sbjct: 14715 ADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 14599
Score = 77.6 bits (163), Expect(4) = 1e-047
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +2 / -1
Query: 200 ALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKKSTLIKAMEEA 328
ALVDAPDM R Q+NFKRLSLTDI IDI RVPKK LI+AME+A
Sbjct: 14909 ALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKA 14781
Score = 72.1 bits (151), Expect(4) = 1e-047
Identities = 29/33 (87%), Positives = 33/33 (100%)
Frame = +2 / -3
Query: 101 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNR 199
FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNR
Sbjct: 15300 FKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNR 15202
Score = 39.1 bits (79), Expect(4) = 1e-047
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1 / -3
Query: 442 EGWCYQARALQAEEGVHCLSPFWWMTC 522
E WC QARA + +EG HCL ++ C
Sbjct: 14505 ESWCCQARACKTQEGDHCLIKYYLQFC 14425
>gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-10-C13 5',
mRNA sequence
Length = 359
Score = 134 bits (287), Expect(3) = 4e-047
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +2 / +2
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A+M F+RFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 14 AKMGFERFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 193
Query: 269 KIDIKRVPKK 298
IDI RVP++
Sbjct: 194 VIDINRVPRR 223
Score = 83.1 bits (175), Expect(3) = 2e-028
Identities = 39/69 (56%), Positives = 45/69 (65%)
Frame = -1 / -3
Query: 294 LGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPIS 115
LGT L+S+ MSV ++ K IW L++SGASTSALFW P*S P* T AT PIS
Sbjct: 219 LGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPIS 40
Query: 114 TNLLNGILA 88
TNL ILA
Sbjct: 39 TNLSKPILA 13
Score = 48.7 bits (100), Expect(3) = 4e-047
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2 / +1
Query: 293 KKSTLIKAMEEADVKTKWENSSWGKK 370
KK LI+A E+ADVK KWE SSWG+K
Sbjct: 217 KKKVLIEAREKADVKNKWEKSSWGRK 294
Score = 46.9 bits (96), Expect(3) = 2e-028
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1 / -1
Query: 369 FLPHELFSHLVFTSASSIALIKVDFL 292
FLPHELFSHL FTSA S+A IK FL
Sbjct: 293 FLPHELFSHLFFTSAFSLASIKTFFL 216
Score = 46.4 bits (95), Expect(3) = 4e-047
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2 / +2
Query: 371 LIVQKRRAALSDFDRFKVMLA 433
LIVQKRRAAL+DFDRFK+MLA
Sbjct: 296 LIVQKRRAALNDFDRFKIMLA 358
Score = 36.3 bits (73), Expect(3) = 2e-028
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 433 CQHDLEPVKVTECSPPLLDNQ 371
CQHDLEPVK+ E S LL N+
Sbjct: 358 CQHDLEPVKIIEGSSSLLHNK 296
>gb|BP856130.1|BP856130 BP856130 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-P08 5',
mRNA sequence
Length = 400
Score = 126 bits (269), Expect(2) = 5e-047
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = +2 / +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
AA+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R Q+NFKRLSLTD
Sbjct: 53 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLTD 232
Query: 266 IKIDIKRVPKK 298
I IDI K+
Sbjct: 233 IVIDINPCAKE 265
Score = 84.5 bits (178), Expect(2) = 5e-047
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +2 / +3
Query: 284 RVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFK 421
RVPKK LI+AME+ADVK KWE S WG+KLIVQKRRA L+DFDR +
Sbjct: 252 RVPKKKALIEAMEKADVKNKWEKS*WGRKLIVQKRRANLNDFDRLR 389
Score = 80.8 bits (170), Expect(2) = 3e-026
Identities = 40/74 (54%), Positives = 45/74 (60%)
Frame = -1 / -2
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K L LMS+ +SV ++ LK IW L+ISGAST ALFW P*S P*FT AT
Sbjct: 273 KPSSLAHGLMSMTISVRDNLLKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSAT 94
Query: 126 RPISTNLLNGILAA 85
PIST LL I AA
Sbjct: 93 LPISTYLLKPIFAA 52
Score = 60.2 bits (125), Expect(2) = 3e-026
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 384 FWTISFLPHELFSHLVFTSASSIALIKVDFLGTRL 280
F TISFLPH+LFSHL FTSA SIA IK F GTR+
Sbjct: 352 FCTISFLPHQLFSHLFFTSAFSIASIKAFFFGTRV 248
>gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-05-H08 3',
mRNA sequence
Length = 465
Score = 190 bits (409), Expect = 5e-047
Identities = 81/106 (76%), Positives = 92/106 (86%)
Frame = +2 / -1
Query: 182 VVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKKSTLIKAMEEADVKTKWENSSW 361
VVDQNRALVDAPDM R Q+N KRLSLTDI IDI RVPKK LI+AME+AD+K KWE SSW
Sbjct: 462 VVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADLKNKWEKSSW 283
Query: 362 GKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELSKLKKASTA* 499
G+KLIVQKRRAAL+DFDRFK+MLA+IKR G +RQEL+KLK+ A*
Sbjct: 282 GRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKREIAA* 145
Score = 127 bits (272), Expect = 4e-028
Identities = 61/102 (59%), Positives = 69/102 (67%)
Frame = -1 / +2
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL F SA SI
Sbjct: 149 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFKSAFSI 328
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFW 190
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW
Sbjct: 329 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFW 454
>gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-12-J16 3',
mRNA sequence
Length = 431
Score = 189 bits (408), Expect = 7e-047
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = +2 / -1
Query: 185 VDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWG 364
VDQNRALVDAPDM R Q+N KRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG
Sbjct: 425 VDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADVKNKWEKSSWG 246
Query: 365 KKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELSKLKKASTA* 499
+KLIVQKRRAAL+DFDRFK+MLA+IKR G +RQEL+KLK+ A*
Sbjct: 245 RKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKREIAA* 111
Score = 130 bits (278), Expect = 6e-029
Identities = 62/102 (60%), Positives = 70/102 (68%)
Frame = -1 / +1
Query: 495 AVDAFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSI 316
A + FSL SSCL P LLILA+M LF TISFLPHELFSHL FTSA SI
Sbjct: 115 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 294
Query: 315 ALIKVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFW 190
A IK FLGT L+S+ MSV ++ K IW L++SGASTSALFW
Sbjct: 295 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFW 420
Score = 107 bits (228), Expect = 5e-022
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +1 / -3
Query: 202 TCGRP*YGQVPD*LQTALTYRHQD*HQTCPQEVNLDQGYGGS*CED*VGEQLMGQEADCP 381
TCG P*+G+ PD + ++Y H+ *+Q QE D G G *CE+ VGE+ MG E C
Sbjct: 408 TCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCA 229
Query: 382 EEEGCTQ*L*QVQGHAGKDQEGWCYQARALQAEEGVHCL 498
EE+ C Q* *QVQ H G++QEGW +A A A++G CL
Sbjct: 228 EEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCL 112
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,513,297,637
Number of Sequences: 1013581
Number of extensions: 20719008
Number of successful extensions: 118473
Number of sequences better than 1.0e-020: 122
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 51706148340
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)