TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.1
(690 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana ... 251 2e-065
gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana ... 251 2e-065
gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS... 251 2e-065
gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-AD... 251 2e-065
gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana ... 251 2e-065
gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana ... 251 2e-065
gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A1... 251 2e-065
ref|NM_118843.2| Arabidopsis thaliana structural constituen... 251 2e-065
gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA... 248 1e-064
gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal ... 248 2e-064
gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, compl... 248 2e-064
emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cD... 248 2e-064
ref|NM_127604.2| Arabidopsis thaliana structural constituen... 248 2e-064
gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana ... 246 7e-064
gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS... 245 9e-064
gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal ... 243 3e-063
emb|AX506868.1| Sequence 1563 from Patent WO0216655 243 3e-063
gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRN... 242 1e-062
gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADI... 237 4e-061
gb|CB254828.1|CB254828 58-E018361-019-007-C16-T7R MPIZ-ADIS... 235 1e-060
gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana ... 232 4e-060
gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana ... 232 1e-059
gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana ... 232 1e-059
gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana... 231 2e-059
gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana... 229 8e-059
gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower... 227 2e-058
gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana... 122 2e-057
gb|BP845987.1|BP845987 BP845987 RAFL21 Arabidopsis thaliana... 222 7e-057
gb|BP800136.1|BP800136 BP800136 RAFL14 Arabidopsis thaliana... 207 3e-056
emb|BX826370.1|CNS0A41L Arabidopsis thaliana Full-length cD... 145 5e-056
gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana... 219 9e-056
gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana... 217 2e-055
gb|BP863509.1|BP863509 BP863509 RAFL21 Arabidopsis thaliana... 127 9e-055
gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana... 212 8e-054
emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cD... 211 2e-053
gb|BP845942.1|BP845942 BP845942 RAFL21 Arabidopsis thaliana... 140 2e-053
gb|BP864372.1|BP864372 BP864372 RAFL21 Arabidopsis thaliana... 120 8e-053
gb|BP843110.1|BP843110 BP843110 RAFL21 Arabidopsis thaliana... 209 1e-052
gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana... 207 3e-052
gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana... 180 1e-051
gb|BP856452.1|BP856452 BP856452 RAFL21 Arabidopsis thaliana... 140 1e-050
gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana... 201 2e-050
gb|T22860.1|T22860 4868 Lambda-PRL2 Arabidopsis thaliana cD... 200 3e-050
gb|BP856130.1|BP856130 BP856130 RAFL21 Arabidopsis thaliana... 130 1e-049
gb|BP860765.1|BP860765 BP860765 RAFL21 Arabidopsis thaliana... 116 3e-048
gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana... 135 6e-048
gb|BP821710.1|BP821710 BP821710 RAFL19 Arabidopsis thaliana... 167 6e-047
gb|BP867797.1|BP867797 BP867797 RAFL21 Arabidopsis thaliana... 189 6e-047
gb|BP799467.1|BP799467 BP799467 RAFL14 Arabidopsis thaliana... 116 5e-046
gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower... 185 1e-045
gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana... 185 1e-045
gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C... 89 2e-045
gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana... 183 4e-045
gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana... 183 5e-045
emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome... 87 7e-045
gb|BP857725.1|BP857725 BP857725 RAFL21 Arabidopsis thaliana... 136 1e-044
gb|BP635805.1|BP635805 BP635805 RAFL18 Arabidopsis thaliana... 180 3e-044
gb|BP868284.1|BP868284 BP868284 RAFL21 Arabidopsis thaliana... 117 4e-044
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 87 1e-043
gb|BE523677.1|BE523677 M40D11STM Arabidopsis developing see... 177 4e-043
gb|BP806298.1|BP806298 BP806298 RAFL16 Arabidopsis thaliana... 121 4e-042
gb|BP585750.1|BP585750 BP585750 RAFL15 Arabidopsis thaliana... 170 5e-041
gb|BP844124.1|BP844124 BP844124 RAFL21 Arabidopsis thaliana... 75 9e-041
gb|AI997481.1|AI997481 701554127 A. thaliana, Columbia Col-... 105 5e-040
gb|BP616173.1|BP616173 BP616173 RAFL16 Arabidopsis thaliana... 166 5e-040
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 87 5e-040
gb|BP784666.1|BP784666 BP784666 RAFL7 Arabidopsis thaliana ... 165 2e-039
gb|BP854616.1|BP854616 BP854616 RAFL21 Arabidopsis thaliana... 108 2e-039
gb|BP849718.1|BP849718 BP849718 RAFL21 Arabidopsis thaliana... 98 3e-039
gb|BP578366.1|BP578366 BP578366 RAFL14 Arabidopsis thaliana... 140 4e-039
gb|BP580988.1|BP580988 BP580988 RAFL14 Arabidopsis thaliana... 161 2e-038
gb|BP860007.1|BP860007 BP860007 RAFL21 Arabidopsis thaliana... 116 2e-038
gb|BP594946.1|BP594946 BP594946 RAFL15 Arabidopsis thaliana... 159 1e-037
gb|BP861626.1|BP861626 BP861626 RAFL21 Arabidopsis thaliana... 157 3e-037
gb|BP577085.1|BP577085 BP577085 RAFL14 Arabidopsis thaliana... 157 4e-037
gb|BP597426.1|BP597426 BP597426 RAFL15 Arabidopsis thaliana... 157 4e-037
gb|AV564782.1|AV564782 AV564782 Arabidopsis thaliana green ... 156 7e-037
gb|AV789575.1|AV789575 AV789575 RAFL6 Arabidopsis thaliana ... 151 2e-035
gb|AV820668.1|AV820668 AV820668 RAFL11 Arabidopsis thaliana... 151 2e-035
gb|BP575262.1|BP575262 BP575262 RAFL14 Arabidopsis thaliana... 151 2e-035
gb|BP799123.1|BP799123 BP799123 RAFL14 Arabidopsis thaliana... 57 2e-035
gb|BP862318.1|BP862318 BP862318 RAFL21 Arabidopsis thaliana... 120 2e-035
gb|BP626679.1|BP626679 BP626679 RAFL17 Arabidopsis thaliana... 150 3e-035
gb|AV789152.1|AV789152 AV789152 RAFL6 Arabidopsis thaliana ... 146 6e-034
gb|BP641343.1|BP641343 BP641343 RAFL19 Arabidopsis thaliana... 142 1e-032
gb|BP625359.1|BP625359 BP625359 RAFL17 Arabidopsis thaliana... 114 2e-032
gb|AV790235.1|AV790235 AV790235 RAFL6 Arabidopsis thaliana ... 141 2e-032
gb|BP593704.1|BP593704 BP593704 RAFL15 Arabidopsis thaliana... 100 2e-032
gb|AV785709.1|AV785709 AV785709 RAFL6 Arabidopsis thaliana ... 140 3e-032
gb|BP610096.1|BP610096 BP610096 RAFL16 Arabidopsis thaliana... 140 3e-032
gb|BP837234.1|BP837234 BP837234 RAFL19 Arabidopsis thaliana... 136 9e-032
gb|BP634478.1|BP634478 BP634478 RAFL17 Arabidopsis thaliana... 137 4e-031
gb|BP594218.1|BP594218 BP594218 RAFL15 Arabidopsis thaliana... 135 1e-030
gb|BP589850.1|BP589850 BP589850 RAFL15 Arabidopsis thaliana... 86 1e-029
gb|BP613409.1|BP613409 BP613409 RAFL16 Arabidopsis thaliana... 113 1e-029
gb|BP643814.1|BP643814 BP643814 RAFL19 Arabidopsis thaliana... 127 2e-029
gb|BP567540.1|BP567540 BP567540 RAFL14 Arabidopsis thaliana... 131 2e-029
gb|AA585838.1|AA585838 28487 Lambda-PRL2 Arabidopsis thalia... 127 3e-028
gb|BP575360.1|BP575360 BP575360 RAFL14 Arabidopsis thaliana... 127 5e-028
gb|BP587944.1|BP587944 BP587944 RAFL15 Arabidopsis thaliana... 125 2e-027
gb|BP627452.1|BP627452 BP627452 RAFL17 Arabidopsis thaliana... 122 1e-026
gb|AV785880.1|AV785880 AV785880 RAFL6 Arabidopsis thaliana ... 120 6e-026
gb|BP628325.1|BP628325 BP628325 RAFL17 Arabidopsis thaliana... 119 1e-025
gb|BP648411.1|BP648411 BP648411 RAFL19 Arabidopsis thaliana... 118 1e-025
gb|BP629494.1|BP629494 BP629494 RAFL17 Arabidopsis thaliana... 117 3e-025
gb|BP826835.1|BP826835 BP826835 RAFL19 Arabidopsis thaliana... 101 8e-025
gb|BP578758.1|BP578758 BP578758 RAFL14 Arabidopsis thaliana... 77 1e-023
gb|BP659935.1|BP659935 BP659935 RAFL19 Arabidopsis thaliana... 78 1e-023
gb|AV808368.1|AV808368 AV808368 RAFL9 Arabidopsis thaliana ... 111 2e-023
gb|BP664156.1|BP664156 BP664156 RAFL21 Arabidopsis thaliana... 67 2e-022
gb|BP660581.1|BP660581 BP660581 RAFL21 Arabidopsis thaliana... 66 2e-022
>gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 3',
mRNA sequence
Length = 640
Score = 251 bits (542), Expect = 2e-065
Identities = 105/128 (82%), Positives = 118/128 (92%)
Frame = +1 / -1
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 568 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 389
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 388 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 209
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 208 KAGVVRQE 185
Score = 189 bits (408), Expect = 6e-047
Identities = 92/138 (66%), Positives = 101/138 (73%)
Frame = -2 / +3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 201 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 380
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 381 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIF 560
Query: 65 AAGGAVSASNTAGRRRAT 12
AAG S+ RRAT
Sbjct: 561 AAGRLEGLSSECKCRRAT 614
Score = 89.5 bits (189), Expect(2) = 3e-022
Identities = 47/112 (41%), Positives = 55/112 (49%)
Frame = +3 / -3
Query: 12 CCSXXXXXXXXXXXXXGSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCP 191
C S G +N QEVR DR S CELR+ W EQ GCP
Sbjct: 614 CRSSTFTLGA*TFQSTGGENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP 435
Query: 192 RHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+G P+ELQ + *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 434 *YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 279
Score = 37.7 bits (76), Expect(2) = 3e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 245 L**VQDHVGQDQESWCCQAR 186
>gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 3',
mRNA sequence
Length = 599
Score = 251 bits (542), Expect = 2e-065
Identities = 105/128 (82%), Positives = 118/128 (92%)
Frame = +1 / -3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 546 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 367
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 366 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 187
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 186 KAGVVRQE 163
Score = 189 bits (408), Expect = 6e-047
Identities = 92/138 (66%), Positives = 101/138 (73%)
Frame = -2 / +2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 179 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 358
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 359 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIF 538
Query: 65 AAGGAVSASNTAGRRRAT 12
AAG S+ RRAT
Sbjct: 539 AAGRLEGLSSECKCRRAT 592
Score = 89.5 bits (189), Expect(2) = 3e-022
Identities = 47/112 (41%), Positives = 55/112 (49%)
Frame = +3 / -2
Query: 12 CCSXXXXXXXXXXXXXGSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCP 191
C S G +N QEVR DR S CELR+ W EQ GCP
Sbjct: 592 CRSSTFTLGA*TFQSTGGENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP 413
Query: 192 RHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+G P+ELQ + *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 412 *YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 257
Score = 37.7 bits (76), Expect(2) = 3e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 223 L**VQDHVGQDQESWCCQAR 164
>gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000B144Q 5-PRIME, mRNA sequence
Length = 596
Score = 251 bits (542), Expect = 2e-065
Identities = 105/128 (82%), Positives = 118/128 (92%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 33 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 212
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 213 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 392
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 393 KAGVVRQE 416
Score = 184 bits (396), Expect = 3e-045
Identities = 87/123 (70%), Positives = 95/123 (77%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 400 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 221
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 220 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIF 41
Query: 65 AAG 57
AAG
Sbjct: 40 AAG 32
Score = 89.0 bits (188), Expect(2) = 4e-022
Identities = 45/96 (46%), Positives = 53/96 (55%)
Frame = +3 / +2
Query: 60 GSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD* 239
G +N QEVR DR S CELR+ W EQ GCP +G P+ELQ
Sbjct: 35 GGENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYR 214
Query: 240 HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+ *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 215 YCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 322
Score = 37.7 bits (76), Expect(2) = 4e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 356 L**VQDHVGQDQESWCCQAR 415
>gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 705
Score = 251 bits (542), Expect = 2e-065
Identities = 105/128 (82%), Positives = 118/128 (92%)
Frame = +1 / +1
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 40 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 219
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 220 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 399
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 400 KAGVVRQE 423
Score = 184 bits (396), Expect = 3e-045
Identities = 87/123 (70%), Positives = 95/123 (77%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 407 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 228
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 227 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIF 48
Query: 65 AAG 57
AAG
Sbjct: 47 AAG 39
Score = 89.0 bits (188), Expect(2) = 4e-022
Identities = 45/96 (46%), Positives = 53/96 (55%)
Frame = +3 / +3
Query: 60 GSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD* 239
G +N QEVR DR S CELR+ W EQ GCP +G P+ELQ
Sbjct: 42 GGENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYR 221
Query: 240 HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+ *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 222 YCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 329
Score = 37.7 bits (76), Expect(2) = 4e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 363 L**VQDHVGQDQESWCCQAR 422
>gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A16218
5-PRIME, mRNA sequence
Length = 630
Score = 251 bits (542), Expect = 2e-065
Identities = 105/128 (82%), Positives = 118/128 (92%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 56 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 235
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 236 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 415
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 416 KAGVVRQE 439
Score = 187 bits (403), Expect = 3e-046
Identities = 91/137 (66%), Positives = 100/137 (72%)
Frame = -2 / -1
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 423 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 244
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 243 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIF 64
Query: 65 AAGGAVSASNTAGRRRA 15
AAG S+ RRA
Sbjct: 63 AAGRLEGLSSECKCRRA 13
Score = 89.0 bits (188), Expect(2) = 4e-022
Identities = 45/96 (46%), Positives = 53/96 (55%)
Frame = +3 / +1
Query: 60 GSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD* 239
G +N QEVR DR S CELR+ W EQ GCP +G P+ELQ
Sbjct: 58 GGENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYR 237
Query: 240 HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+ *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 238 YCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 345
Score = 37.7 bits (76), Expect(2) = 4e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 379 L**VQDHVGQDQESWCCQAR 438
>gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L04214
5-PRIME, mRNA sequence
Length = 604
Score = 251 bits (542), Expect = 2e-065
Identities = 105/128 (82%), Positives = 118/128 (92%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 44 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 223
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 224 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 403
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 404 KAGVVRQE 427
Score = 187 bits (403), Expect = 3e-046
Identities = 91/137 (66%), Positives = 100/137 (72%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 411 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 232
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 231 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIF 52
Query: 65 AAGGAVSASNTAGRRRA 15
AAG S+ RRA
Sbjct: 51 AAGRLEGLSSECKCRRA 1
Score = 89.0 bits (188), Expect(2) = 4e-022
Identities = 45/96 (46%), Positives = 53/96 (55%)
Frame = +3 / +1
Query: 60 GSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD* 239
G +N QEVR DR S CELR+ W EQ GCP +G P+ELQ
Sbjct: 46 GGENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYR 225
Query: 240 HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+ *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 226 YCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 333
Score = 37.7 bits (76), Expect(2) = 4e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 367 L**VQDHVGQDQESWCCQAR 426
>gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 619
Score = 251 bits (542), Expect = 2e-065
Identities = 105/128 (82%), Positives = 118/128 (92%)
Frame = +1 / +1
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 52 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 231
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 232 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 411
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 412 KAGVVRQE 435
Score = 189 bits (408), Expect = 6e-047
Identities = 92/138 (66%), Positives = 101/138 (73%)
Frame = -2 / -3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 419 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 240
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 239 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIF 60
Query: 65 AAGGAVSASNTAGRRRAT 12
AAG S+ RRAT
Sbjct: 59 AAGRLEGLSSECKCRRAT 6
Score = 89.5 bits (189), Expect(2) = 3e-022
Identities = 47/112 (41%), Positives = 55/112 (49%)
Frame = +3 / +3
Query: 12 CCSXXXXXXXXXXXXXGSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCP 191
C S G +N QEVR DR S CELR+ W EQ GCP
Sbjct: 6 CRSSTFTLGA*TFQSTGGENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP 185
Query: 192 RHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+G P+ELQ + *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 186 *YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 341
Score = 37.7 bits (76), Expect(2) = 3e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 375 L**VQDHVGQDQESWCCQAR 434
>ref|NM_118843.2| Arabidopsis thaliana structural constituent of ribosome AT4G27090
mRNA, complete cds
Length = 668
Score = 251 bits (542), Expect = 2e-065
Identities = 105/128 (82%), Positives = 118/128 (92%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 53 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 232
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 233 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 412
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 413 KAGVVRQE 436
Score = 189 bits (408), Expect = 6e-047
Identities = 92/138 (66%), Positives = 101/138 (73%)
Frame = -2 / -3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 420 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 241
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 240 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIF 61
Query: 65 AAGGAVSASNTAGRRRAT 12
AAG S+ RRAT
Sbjct: 60 AAGRLEGLSSECKCRRAT 7
Score = 89.5 bits (189), Expect(2) = 3e-022
Identities = 47/112 (41%), Positives = 55/112 (49%)
Frame = +3 / +1
Query: 12 CCSXXXXXXXXXXXXXGSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCP 191
C S G +N QEVR DR S CELR+ W EQ GCP
Sbjct: 7 CRSSTFTLGA*TFQSTGGENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP 186
Query: 192 RHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+G P+ELQ + *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 187 *YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 342
Score = 37.7 bits (76), Expect(2) = 3e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 376 L**VQDHVGQDQESWCCQAR 435
>gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l14, mRNA sequence
Length = 647
Score = 248 bits (536), Expect = 1e-064
Identities = 104/128 (81%), Positives = 117/128 (91%)
Frame = +1 / -1
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAA M FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 626 PAAXMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 447
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK
Sbjct: 446 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIK 267
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 266 KAGVVRQE 243
Score = 183 bits (395), Expect = 4e-045
Identities = 87/123 (70%), Positives = 95/123 (77%)
Frame = -2 / +1
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 259 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 438
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I
Sbjct: 439 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIX 618
Query: 65 AAG 57
AAG
Sbjct: 619 AAG 627
Score = 87.7 bits (185), Expect(2) = 1e-021
Identities = 45/96 (46%), Positives = 52/96 (54%)
Frame = +3 / -3
Query: 60 GSQNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD* 239
G N QEVR DR S CELR+ W EQ GCP +G P+ELQ
Sbjct: 624 GGXNGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYR 445
Query: 240 HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
+ *H C KE+ D+GNG *CE+QVGE LMG EA
Sbjct: 444 YCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 337
Score = 37.7 bits (76), Expect(2) = 1e-021
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 381 L*QVQGHVGEDQEGWCHQAR 440
L* VQ HVG+DQE WC QAR
Sbjct: 303 L**VQDHVGQDQESWCCQAR 244
>gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 672
Score = 248 bits (535), Expect = 2e-064
Identities = 105/126 (83%), Positives = 115/126 (91%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 424 GAIRQE 441
G +RQE
Sbjct: 412 GIVRQE 429
Score = 180 bits (388), Expect = 3e-044
Identities = 86/121 (71%), Positives = 92/121 (76%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 413 PALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 234
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL IL
Sbjct: 233 TMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPIL 54
Query: 65 A 63
A
Sbjct: 53 A 51
Score = 124 bits (265), Expect = 3e-027
Identities = 58/124 (46%), Positives = 75/124 (60%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQ 245
QN E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+
Sbjct: 54 QNGF*EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HR 233
Query: 246 D*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGW 425
*+ +E+ D GNG *CE+QVGE MG E C+EE+S Q* *QVQ HVG++QEGW
Sbjct: 234 H*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGW 413
Query: 426 CHQA 437
+A
Sbjct: 414 YCEA 425
Score = 63.4 bits (132), Expect(4) = 4e-028
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 160
Score = 44.1 bits (90), Expect(4) = 4e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 382 *TCQNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 290
Score = 40.9 bits (83), Expect(4) = 4e-028
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 423 PHNTSPLDFGQHDLEPVKIIE 361
Score = 33.6 bits (67), Expect(4) = 4e-028
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 133 HTPCRSSQGPLARSPRTS*TAFW 65
H P RS + PL++SPR S* FW
Sbjct: 121 HNPRRS*RAPLSQSPRIS*NPFW 53
>gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, complete sequence
Length = 628
Score = 248 bits (535), Expect = 2e-064
Identities = 105/126 (83%), Positives = 115/126 (91%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 424 GAIRQE 441
G +RQE
Sbjct: 412 GIVRQE 429
Score = 180 bits (388), Expect = 3e-044
Identities = 86/121 (71%), Positives = 92/121 (76%)
Frame = -2 / -3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 413 PALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 234
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL IL
Sbjct: 233 TMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPIL 54
Query: 65 A 63
A
Sbjct: 53 A 51
Score = 124 bits (265), Expect = 3e-027
Identities = 58/124 (46%), Positives = 75/124 (60%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQ 245
QN E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+
Sbjct: 54 QNGF*EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HR 233
Query: 246 D*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGW 425
*+ +E+ D GNG *CE+QVGE MG E C+EE+S Q* *QVQ HVG++QEGW
Sbjct: 234 H*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGW 413
Query: 426 CHQA 437
+A
Sbjct: 414 YCEA 425
Score = 63.4 bits (132), Expect(4) = 4e-028
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -2
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 160
Score = 44.1 bits (90), Expect(4) = 4e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 382 *TCQNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 290
Score = 40.9 bits (83), Expect(4) = 4e-028
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -2
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 423 PHNTSPLDFGQHDLEPVKIIE 361
Score = 33.6 bits (67), Expect(4) = 4e-028
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 133 HTPCRSSQGPLARSPRTS*TAFW 65
H P RS + PL++SPR S* FW
Sbjct: 121 HNPRRS*RAPLSQSPRIS*NPFW 53
>emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH2ZA05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 580
Score = 248 bits (535), Expect = 2e-064
Identities = 105/126 (83%), Positives = 115/126 (91%)
Frame = +1 / +2
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 26 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 205
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 206 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 385
Query: 424 GAIRQE 441
G +RQE
Sbjct: 386 GIVRQE 403
Score = 180 bits (388), Expect = 3e-044
Identities = 86/121 (71%), Positives = 92/121 (76%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 387 PALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 208
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL IL
Sbjct: 207 TMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPIL 28
Query: 65 A 63
A
Sbjct: 27 A 25
Score = 124 bits (265), Expect = 3e-027
Identities = 58/124 (46%), Positives = 75/124 (60%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQ 245
QN E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+
Sbjct: 28 QNGF*EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HR 207
Query: 246 D*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGW 425
*+ +E+ D GNG *CE+QVGE MG E C+EE+S Q* *QVQ HVG++QEGW
Sbjct: 208 H*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGW 387
Query: 426 CHQA 437
+A
Sbjct: 388 YCEA 399
Score = 63.4 bits (132), Expect(4) = 4e-028
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 271 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 134
Score = 44.1 bits (90), Expect(4) = 4e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 356 *TCQNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 264
Score = 40.9 bits (83), Expect(4) = 4e-028
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 397 PHNTSPLDFGQHDLEPVKIIE 335
Score = 33.6 bits (67), Expect(4) = 4e-028
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 133 HTPCRSSQGPLARSPRTS*TAFW 65
H P RS + PL++SPR S* FW
Sbjct: 95 HNPRRS*RAPLSQSPRIS*NPFW 27
>ref|NM_127604.2| Arabidopsis thaliana structural constituent of ribosome AT2G20450
mRNA, complete cds
Length = 642
Score = 248 bits (535), Expect = 2e-064
Identities = 105/126 (83%), Positives = 115/126 (91%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 424 GAIRQE 441
G +RQE
Sbjct: 412 GIVRQE 429
Score = 180 bits (388), Expect = 3e-044
Identities = 86/121 (71%), Positives = 92/121 (76%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 413 PALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 234
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL IL
Sbjct: 233 TMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPIL 54
Query: 65 A 63
A
Sbjct: 53 A 51
Score = 124 bits (265), Expect = 3e-027
Identities = 58/124 (46%), Positives = 75/124 (60%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQ 245
QN E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+
Sbjct: 54 QNGF*EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HR 233
Query: 246 D*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGW 425
*+ +E+ D GNG *CE+QVGE MG E C+EE+S Q* *QVQ HVG++QEGW
Sbjct: 234 H*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGW 413
Query: 426 CHQA 437
+A
Sbjct: 414 YCEA 425
Score = 63.4 bits (132), Expect(4) = 4e-028
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 160
Score = 44.1 bits (90), Expect(4) = 4e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 382 *TCQNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 290
Score = 40.9 bits (83), Expect(4) = 4e-028
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 423 PHNTSPLDFGQHDLEPVKIIE 361
Score = 33.6 bits (67), Expect(4) = 4e-028
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 133 HTPCRSSQGPLARSPRTS*TAFW 65
H P RS + PL++SPR S* FW
Sbjct: 121 HNPRRS*RAPLSQSPRIS*NPFW 53
>gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-M06 5',
mRNA sequence
Length = 648
Score = 246 bits (531), Expect = 7e-064
Identities = 104/126 (82%), Positives = 114/126 (90%)
Frame = +1 / +2
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 53 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 232
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+ML KIKR
Sbjct: 233 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLXKIKRA 412
Query: 424 GAIRQE 441
G +RQE
Sbjct: 413 GIVRQE 430
Score = 178 bits (384), Expect = 1e-043
Identities = 85/121 (70%), Positives = 91/121 (75%)
Frame = -2 / -1
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI NM LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 414 PALLILXNMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 235
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL IL
Sbjct: 234 TMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPIL 55
Query: 65 A 63
A
Sbjct: 54 A 52
Score = 124 bits (265), Expect = 3e-027
Identities = 58/124 (46%), Positives = 75/124 (60%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQ 245
QN E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+
Sbjct: 55 QNGF*EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HR 234
Query: 246 D*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGW 425
*+ +E+ D GNG *CE+QVGE MG E C+EE+S Q* *QVQ HVG++QEGW
Sbjct: 235 H*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGW 414
Query: 426 CHQA 437
+A
Sbjct: 415 YCEA 426
Score = 63.4 bits (132), Expect(4) = 3e-028
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -3
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 298 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 161
Score = 44.1 bits (90), Expect(4) = 3e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 383 *TCQNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 291
Score = 41.4 bits (84), Expect(4) = 3e-028
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 424 PHNTSPLDFXQHDLEPVKIIE 362
Score = 33.6 bits (67), Expect(4) = 3e-028
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 133 HTPCRSSQGPLARSPRTS*TAFW 65
H P RS + PL++SPR S* FW
Sbjct: 122 HNPRRS*RAPLSQSPRIS*NPFW 54
>gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768M238Q 5-PRIME, mRNA sequence
Length = 611
Score = 245 bits (530), Expect = 9e-064
Identities = 104/126 (82%), Positives = 115/126 (91%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM FKRFVEIGRVALVNYG++YG+LVVIV+VVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 1 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVNVVDQNRALVDAPDMERIQMNLKRLSLTDI 180
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 181 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 360
Query: 424 GAIRQE 441
G +RQE
Sbjct: 361 GIVRQE 378
Score = 176 bits (378), Expect = 8e-043
Identities = 84/120 (70%), Positives = 90/120 (75%)
Frame = -2 / -1
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 362 PALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 183
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
MSVR++ KFIW +MSGAST ALFWSTT T+TT P S P* T AT PISTNLL IL
Sbjct: 182 TMSVRDNLFKFIWILSMSGASTSALFWSTTLTITTSFP*SSP*LTSATLPISTNLLKPIL 3
Score = 122 bits (261), Expect = 1e-026
Identities = 57/124 (45%), Positives = 75/124 (60%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQ 245
QN E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+
Sbjct: 3 QNGF*EIRGDWESGAR*LRRGLWKARGYRQCSRPKQGTCGCP*HGENPDEFEEVVSY*HR 182
Query: 246 D*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGW 425
*+ +E+ D GNG *CE+QVGE MG E C++E+S Q* *QVQ HVG++QEGW
Sbjct: 183 H*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAKEKSCPQ*F*QVQDHVGQNQEGW 362
Query: 426 CHQA 437
+A
Sbjct: 363 YCEA 374
Score = 63.4 bits (132), Expect(4) = 3e-027
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -3
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 246 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 109
Score = 41.4 bits (84), Expect(4) = 3e-027
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L S Q S PM+ SPTC SHQ
Sbjct: 331 *TCQNH*GQLFSFAQ*VSYPMNSSPTCSSHQ 239
Score = 40.9 bits (83), Expect(4) = 3e-027
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 372 PHNTSPLDFGQHDLEPVKIIE 310
Score = 33.6 bits (67), Expect(4) = 3e-027
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 133 HTPCRSSQGPLARSPRTS*TAFW 65
H P RS + PL++SPR S* FW
Sbjct: 70 HNPRRS*RAPLSQSPRIS*NPFW 2
>gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 436
Score = 243 bits (526), Expect = 3e-063
Identities = 103/124 (83%), Positives = 113/124 (91%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
M FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI I
Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 180
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR G
Sbjct: 181 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 360
Query: 430 IRQE 441
+RQE
Sbjct: 361 VRQE 372
Score = 176 bits (378), Expect = 8e-043
Identities = 83/116 (71%), Positives = 89/116 (76%)
Frame = -2 / -3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 356 PALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 177
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLL 78
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL
Sbjct: 176 TMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLL 9
Score = 121 bits (259), Expect = 2e-026
Identities = 56/119 (47%), Positives = 73/119 (61%)
Frame = +3 / +3
Query: 81 EVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQD*H*T 260
E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+ *+
Sbjct: 12 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 191
Query: 261 CPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGWCHQA 437
+E+ D GNG *CE+QVGE MG E C+EE+S Q* *QVQ HVG++QEGW +A
Sbjct: 192 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEA 368
Score = 63.4 bits (132), Expect(4) = 5e-026
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -2
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 240 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 103
Score = 44.1 bits (90), Expect(4) = 5e-026
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 325 *TCQNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 233
Score = 40.9 bits (83), Expect(4) = 5e-026
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -2
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 366 PHNTSPLDFGQHDLEPVKIIE 304
Score = 26.3 bits (51), Expect(4) = 5e-026
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 133 HTPCRSSQGPLARSPRTS* 77
H P RS + PL++SPR S*
Sbjct: 64 HNPRRS*RAPLSQSPRIS* 8
>emb|AX506868.1| Sequence 1563 from Patent WO0216655
Length = 405
Score = 243 bits (526), Expect = 3e-063
Identities = 103/124 (83%), Positives = 113/124 (91%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
M FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI I
Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 180
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR G
Sbjct: 181 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 360
Query: 430 IRQE 441
+RQE
Sbjct: 361 VRQE 372
Score = 176 bits (378), Expect = 8e-043
Identities = 83/116 (71%), Positives = 89/116 (76%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 356 PALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 177
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLL 78
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL
Sbjct: 176 TMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLL 9
Score = 121 bits (259), Expect = 2e-026
Identities = 56/119 (47%), Positives = 73/119 (61%)
Frame = +3 / +3
Query: 81 EVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQD*H*T 260
E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+ *+
Sbjct: 12 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 191
Query: 261 CPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGWCHQA 437
+E+ D GNG *CE+QVGE MG E C+EE+S Q* *QVQ HVG++QEGW +A
Sbjct: 192 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEA 368
Score = 63.4 bits (132), Expect(4) = 5e-026
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 240 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 103
Score = 44.1 bits (90), Expect(4) = 5e-026
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 325 *TCQNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 233
Score = 40.9 bits (83), Expect(4) = 5e-026
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 366 PHNTSPLDFGQHDLEPVKIIE 304
Score = 26.3 bits (51), Expect(4) = 5e-026
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / -3
Query: 133 HTPCRSSQGPLARSPRTS* 77
H P RS + PL++SPR S*
Sbjct: 64 HNPRRS*RAPLSQSPRIS* 8
>gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 405
Score = 242 bits (522), Expect = 1e-062
Identities = 101/124 (81%), Positives = 114/124 (91%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
M FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct: 1 MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 180
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G
Sbjct: 181 DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 360
Query: 430 IRQE 441
+RQE
Sbjct: 361 VRQE 372
Score = 177 bits (380), Expect = 4e-043
Identities = 83/116 (71%), Positives = 91/116 (78%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 356 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 177
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLL 78
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL
Sbjct: 176 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLL 9
>gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 397
Score = 237 bits (511), Expect = 4e-061
Identities = 100/119 (84%), Positives = 111/119 (93%)
Frame = +1 / +1
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 40 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 219
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKI
Sbjct: 220 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKI 396
Score = 179 bits (386), Expect = 7e-044
Identities = 85/119 (71%), Positives = 93/119 (78%)
Frame = -2 / -3
Query: 413 IFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSV 234
I ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SV
Sbjct: 395 ILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 216
Query: 233 RESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAG 57
R++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG
Sbjct: 215 RDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAG 39
>gb|CB254828.1|CB254828 58-E018361-019-007-C16-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768C167Q 5-PRIME, mRNA sequence
Length = 541
Score = 235 bits (508), Expect = 1e-060
Identities = 98/128 (76%), Positives = 113/128 (88%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAA M FKR+VEIGRVALVNYG+++G+LV IV++VD NRALVDAPDM R QMNFKRLSLT
Sbjct: 45 PAANMGFKRYVEIGRVALVNYGEDHGKLVAIVNIVDHNRALVDAPDMERIQMNFKRLSLT 224
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 417
DI IDI RVPKK LI AME+ADVK+KWE SSWG+KLI+QKRRA+LN FDRFK+MLAKIK
Sbjct: 225 DIVIDINRVPKKKALIDAMEKADVKNKWEKSSWGRKLIMQKRRANLNYFDRFKIMLAKIK 404
Query: 418 RGGAIRQE 441
+ G +RQE
Sbjct: 405 KAGVVRQE 428
Score = 166 bits (356), Expect = 9e-040
Identities = 80/123 (65%), Positives = 89/123 (72%)
Frame = -2 / -1
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSK L AL F ISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 412 PAFLILANMILNLSK*LRLALRFCMISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 233
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGIL 66
+SVR++ LKFIW ++SGAST+AL WST T+ T P S P*FT AT PIST LL +
Sbjct: 232 TISVRDNLLKFIWILSISGASTKALLWSTMLTIATSFP*SSP*FTSATLPISTYLLKPMF 53
Query: 65 AAG 57
AAG
Sbjct: 52 AAG 44
Score = 61.6 bits (128), Expect(4) = 2e-021
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = -1 / -3
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKS 175
HIS HC+DQ LLW +VN ++ + +PLEVHL H+ GIH+S
Sbjct: 296 HISLFHCVDQSLLLWHAVDVNDNIGKRQPLEVHLDPLHIRGIHQS 162
Score = 36.8 bits (74), Expect(4) = 2e-021
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1 / -3
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
PD ++ LDL QHDLEP+KV++
Sbjct: 422 PDNSSFLDLGQHDLEPIKVVK 360
Score = 32.7 bits (65), Expect(4) = 2e-021
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 346 ASCPMSYSPTCFSHQ 302
AS PMS+SPTC SHQ
Sbjct: 333 ASYPMSFSPTCSSHQ 289
Score = 28.1 bits (55), Expect(4) = 2e-021
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 114 HKGHSPDLHEPLERH 70
HK +SPDL+ PLE H
Sbjct: 101 HKCYSPDLNVPLETH 57
>gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 5',
mRNA sequence
Length = 617
Score = 232 bits (500), Expect(2) = 4e-060
Identities = 97/118 (82%), Positives = 109/118 (92%)
Frame = +1 / +3
Query: 88 VEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKIDIKRVP 267
VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLTDI IDI RVP
Sbjct: 81 VEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVP 260
Query: 268 KKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQE 441
KK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQE
Sbjct: 261 KKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQE 434
Score = 174 bits (374), Expect = 3e-042
Identities = 81/113 (71%), Positives = 89/113 (78%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 418 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 239
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPIST 87
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST
Sbjct: 238 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPIST 80
Score = 22.1 bits (42), Expect(2) = 4e-060
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 58 PAAKMPFKRF 87
PAAKM FKR+
Sbjct: 50 PAAKMGFKRY 79
>gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 5',
mRNA sequence
Length = 677
Score = 232 bits (500), Expect = 1e-059
Identities = 97/118 (82%), Positives = 109/118 (92%)
Frame = +1 / +1
Query: 88 VEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKIDIKRVP 267
VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLTDI IDI RVP
Sbjct: 85 VEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVP 264
Query: 268 KKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQE 441
KK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQE
Sbjct: 265 KKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQE 438
Score = 174 bits (374), Expect = 3e-042
Identities = 81/113 (71%), Positives = 89/113 (78%)
Frame = -2 / -1
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 422 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 243
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPIST 87
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST
Sbjct: 242 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPIST 84
>gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I19217
5-PRIME, mRNA sequence
Length = 441
Score = 232 bits (500), Expect = 1e-059
Identities = 98/119 (82%), Positives = 108/119 (90%)
Frame = +1 / +3
Query: 85 FVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKIDIKRV 264
FVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI IDI RV
Sbjct: 3 FVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRV 182
Query: 265 PKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQE 441
PKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LND DRFK+MLAKIKR G +RQE
Sbjct: 183 PKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDXDRFKIMLAKIKRAGIVRQE 359
Score = 169 bits (364), Expect = 7e-041
Identities = 80/114 (70%), Positives = 86/114 (75%)
Frame = -2 / -3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLS SL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 343 PALLILANMILNLSXSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 164
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTN 84
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTN
Sbjct: 163 TMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTN 2
Score = 118 bits (253), Expect = 1e-025
Identities = 55/118 (46%), Positives = 72/118 (61%)
Frame = +3 / +2
Query: 84 VRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQD*H*TC 263
+RGD SG LR+G+W +QG+CGCP HG P+E + *H+ *+
Sbjct: 2 IRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQS 181
Query: 264 PKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGWCHQA 437
+E+ D GNG *CE+QVGE MG E C+EE+S Q* *QVQ HVG++QEGW +A
Sbjct: 182 SQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*X*QVQDHVGQNQEGWYCEA 355
Score = 63.4 bits (132), Expect(4) = 7e-024
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -2
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 227 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 90
Score = 41.4 bits (84), Expect(4) = 7e-024
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TC +H* L SS Q S PM+ SPTC SHQ
Sbjct: 312 *TCXNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 220
Score = 38.2 bits (77), Expect(4) = 7e-024
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1 / -2
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPV +IE
Sbjct: 353 PHNTSPLDFGQHDLEPVXIIE 291
Score = 24.4 bits (47), Expect(4) = 7e-024
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / -1
Query: 133 HTPCRSSQGPLARSPR 86
H P RS + PL++SPR
Sbjct: 51 HNPRRS*RAPLSQSPR 4
>gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-42-L13 5',
mRNA sequence
Length = 407
Score = 231 bits (499), Expect = 2e-059
Identities = 98/119 (82%), Positives = 109/119 (91%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 50 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 229
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LND DRFK+M AKI
Sbjct: 230 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDLDRFKIMSAKI 406
Score = 182 bits (393), Expect = 7e-045
Identities = 89/134 (66%), Positives = 99/134 (73%)
Frame = -2 / -3
Query: 413 IFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSV 234
I A+M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SV
Sbjct: 405 ILADMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 226
Query: 233 RESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGG 54
R++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG
Sbjct: 225 RDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAGR 46
Query: 53 AVSASNTAGRRRAT 12
S+ RRAT
Sbjct: 45 LEGLSSECKCRRAT 4
>gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-A08 5',
mRNA sequence
Length = 397
Score = 229 bits (494), Expect = 8e-059
Identities = 96/115 (83%), Positives = 107/115 (93%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 48 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 227
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVM 402
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+M
Sbjct: 228 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIM 392
Score = 181 bits (389), Expect = 3e-044
Identities = 88/132 (66%), Positives = 98/132 (74%)
Frame = -2 / -1
Query: 407 ANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRE 228
A+M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SVR+
Sbjct: 397 AHMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRD 218
Query: 227 SRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAV 48
+ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG
Sbjct: 217 NLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAGRLE 38
Query: 47 SASNTAGRRRAT 12
S+ RRAT
Sbjct: 37 GLSSECKCRRAT 2
>gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB086g02F 3', mRNA sequence
Length = 512
Score = 227 bits (491), Expect = 2e-058
Identities = 95/116 (81%), Positives = 107/116 (92%)
Frame = +1 / -2
Query: 94 IGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKIDIKRVPKK 273
IGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLTDI IDI RVPKK
Sbjct: 511 IGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKK 332
Query: 274 TTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQE 441
LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQE
Sbjct: 331 KALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQE 164
Score = 170 bits (365), Expect = 5e-041
Identities = 79/111 (71%), Positives = 87/111 (78%)
Frame = -2 / +3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 180 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 359
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPI 93
+SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PI
Sbjct: 360 TISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPI 512
>gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-76-N21 5',
mRNA sequence
Length = 386
Score = 122 bits (262), Expect(2) = 2e-057
Identities = 53/60 (88%), Positives = 56/60 (93%)
Frame = +1 / +2
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 14 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 193
Score = 122 bits (261), Expect(2) = 2e-057
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +1 / +3
Query: 247 IDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGG 426
IDI RVPKK LI+AME+ADVK+KWE SSWG+K IVQKRRA+LNDFDRFK+MLAKIKR G
Sbjct: 198 IDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKFIVQKRRAALNDFDRFKIMLAKIKRAG 377
Query: 427 AIR 435
+R
Sbjct: 378 IVR 386
Score = 92.3 bits (195), Expect(2) = 1e-038
Identities = 43/60 (71%), Positives = 46/60 (76%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL ALLF TI+FLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 376 PALLILANMILNLSKSLRAALLFCTINFLPHELFSHLFFTSAFSIASIKTFFLGTLLISM 197
Score = 90.4 bits (191), Expect(2) = 1e-038
Identities = 42/60 (70%), Positives = 46/60 (76%)
Frame = -2 / -3
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL ILA
Sbjct: 192 MSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPILA 13
Score = 73.0 bits (153), Expect(2) = 9e-023
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +2 / +1
Query: 269 RRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
RR * RQWR+LM*+ SGR HG + L RR E SM LTGSRSCW +SRG+V
Sbjct: 220 RRRF*LRQWRRLM*RTSGRRVHGVGNLLCRREELPSMILTGSRSCWPKSRGLV 378
Score = 56.1 bits (116), Expect(2) = 9e-023
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQ 245
QN E+RGD SG LR+G+W +QG+CGCP HG P+E + *H+
Sbjct: 16 QNGF*EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HR 195
Score = 43.7 bits (89), Expect(5) = 4e-025
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 345 *TCQNH*GQLFSSAQ*ISYPMNSSPTCSSHQ 253
Score = 40.9 bits (83), Expect(5) = 4e-025
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 386 PHNTSPLDFGQHDLEPVKIIE 324
Score = 38.2 bits (77), Expect(5) = 4e-025
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -1 / -2
Query: 243 DVSQGKPLEVHLATNHVGGIHKSP 172
DVS+ +PL++HL + HV GIHK P
Sbjct: 193 DVSKRQPLQIHLDSLHVRGIHKCP 122
Score = 33.6 bits (67), Expect(5) = 4e-025
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 133 HTPCRSSQGPLARSPRTS*TAFW 65
H P RS + PL++SPR S* FW
Sbjct: 83 HNPRRS*RAPLSQSPRIS*NPFW 15
Score = 29.9 bits (59), Expect(5) = 4e-025
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVN 247
HIS LHCL+Q LL ++ ++N
Sbjct: 260 HISLLHCLNQNLLLGNSVDIN 198
>gb|BP845987.1|BP845987 BP845987 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-G23 5',
mRNA sequence
Length = 404
Score = 222 bits (480), Expect = 7e-057
Identities = 95/119 (79%), Positives = 105/119 (88%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRA VDAPDM R QMNFKRLSLT
Sbjct: 48 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLT 227
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
DI IDI RVPKK I+AME+ADVK+KWE SSWG+KLIVQKRRA LND DRFK+M KI
Sbjct: 228 DIVIDINRVPKKKAWIEAMEKADVKNKWEKSSWGRKLIVQKRRAKLNDLDRFKIMWDKI 404
Score = 183 bits (394), Expect = 5e-045
Identities = 89/134 (66%), Positives = 100/134 (74%)
Frame = -2 / -2
Query: 413 IFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSV 234
I ++M LNLSKSLS AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SV
Sbjct: 403 ILSHMILNLSKSLSLALRFCTISFLPHELFSHLFFTSAFSIASIQAFFFGTRLMSMTISV 224
Query: 233 RESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGG 54
R++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG
Sbjct: 223 RDNLLKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAGR 44
Query: 53 AVSASNTAGRRRAT 12
S+ RRAT
Sbjct: 43 LEGLSSECKCRRAT 2
>gb|BP800136.1|BP800136 BP800136 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-14-A17 5',
mRNA sequence
Length = 408
Score = 207 bits (447), Expect(2) = 3e-056
Identities = 87/108 (80%), Positives = 98/108 (90%)
Frame = +1 / +1
Query: 97 GRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKIDIKRVPKKT 276
G +ALVNYG+ +G+LVVIVDVVDQ RALVDAPDM R QMNFKRLSLTDI IDI RVPKK
Sbjct: 85 GELALVNYGEHHGKLVVIVDVVDQKRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKK 264
Query: 277 TLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+
Sbjct: 265 ALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 408
Score = 161 bits (347), Expect(2) = 4e-040
Identities = 75/107 (70%), Positives = 84/107 (78%)
Frame = -2 / -2
Query: 416 LIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMS 237
LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +S
Sbjct: 404 LILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTIS 225
Query: 236 VRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRP 96
VR++ LKFIW ++SGAST+ALFWSTTST+TT P P*FT A+ P
Sbjct: 224 VRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*CSP*FTSASSP 84
Score = 33.6 bits (67), Expect(2) = 3e-056
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVA 108
PAAKM FKR+VEIGR +
Sbjct: 45 PAAKMGFKRYVEIGRAS 95
Score = 25.4 bits (49), Expect(2) = 4e-040
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 102 SPDLHEPLERHF 67
SPDL+ PLE HF
Sbjct: 89 SPDLNVPLETHF 54
>emb|BX826370.1|CNS0A41L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB1ZE11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 583
Score = 145 bits (312), Expect(2) = 5e-056
Identities = 63/77 (81%), Positives = 69/77 (89%)
Frame = +1 / +1
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVD NRALVDAPDM R QMNFKRLSLT
Sbjct: 49 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDHNRALVDAPDMERIQMNFKRLSLT 228
Query: 238 DIKIDIKRVPKKTTLIK 288
DI IDI RVPKK LI+
Sbjct: 229 DIVIDINRVPKKKALIE 279
Score = 115 bits (245), Expect(2) = 4e-040
Identities = 56/98 (57%), Positives = 67/98 (68%)
Frame = -2 / -3
Query: 305 SASSIALISVVFFGTRLMSILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYS 126
S ++ I FFGTRLMS+ +SVR++ LKFIW ++SGAST+AL WSTTST+TT P S
Sbjct: 296 SLFALRSIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALLWSTTSTITTSFP*S 117
Query: 125 LP*FTRATRPISTNLLNGILAAGGAVSASNTAGRRRAT 12
P*FT AT PIST LL I AAG S+ RRAT
Sbjct: 116 SP*FTSATLPISTYLLKPIFAAGRLEGLSSECKCRRAT 3
Score = 94.5 bits (200), Expect(2) = 5e-056
Identities = 36/45 (80%), Positives = 42/45 (93%)
Frame = +1 / +3
Query: 307 VKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQE 441
VK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQE
Sbjct: 303 VKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQE 437
Score = 72.1 bits (151), Expect(2) = 4e-040
Identities = 33/43 (76%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSAS 297
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA+
Sbjct: 421 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAA 293
>gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-54-O16 5',
mRNA sequence
Length = 387
Score = 219 bits (472), Expect = 9e-056
Identities = 93/110 (84%), Positives = 101/110 (91%)
Frame = +1 / +2
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM FKRFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 56 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 235
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRF 393
IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRF
Sbjct: 236 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRF 385
Score = 166 bits (356), Expect = 9e-040
Identities = 79/111 (71%), Positives = 85/111 (76%)
Frame = -2 / -1
Query: 395 LNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLK 216
LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+ MSVR++ K
Sbjct: 387 LNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISMTMSVRDNLFK 208
Query: 215 FIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
FIW +MSGAST ALFWSTTST+TT P S P* T AT PISTNLL ILA
Sbjct: 207 FIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPILA 55
Score = 63.4 bits (132), Expect(3) = 4e-021
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1 / -3
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HIS LHCL+Q LL ++ ++N DVS+ +PL++HL + HV GIHK P
Sbjct: 301 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCP 164
Score = 44.1 bits (90), Expect(3) = 4e-021
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SS Q S PM+ SPTC SHQ
Sbjct: 386 *TCQNH*GQLFSSAQ*VSYPMNSSPTCSSHQ 294
Score = 33.6 bits (67), Expect(3) = 4e-021
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 133 HTPCRSSQGPLARSPRTS*TAFW 65
H P RS + PL++SPR S* FW
Sbjct: 125 HNPRRS*RAPLSQSPRIS*NPFW 57
>gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-87-E19 5',
mRNA sequence
Length = 385
Score = 217 bits (469), Expect = 2e-055
Identities = 92/111 (82%), Positives = 102/111 (91%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 48 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 227
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDR 390
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LND DR
Sbjct: 228 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDLDR 380
Score = 174 bits (375), Expect = 2e-042
Identities = 85/128 (66%), Positives = 95/128 (74%)
Frame = -2 / -1
Query: 395 LNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLK 216
L+LSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SVR++ LK
Sbjct: 385 LDLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLK 206
Query: 215 FIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAVSASN 36
FIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG S+
Sbjct: 205 FIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAGRLEGLSS 26
Query: 35 TAGRRRAT 12
RRAT
Sbjct: 25 ECKCRRAT 2
>gb|BP863509.1|BP863509 BP863509 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-66-P15 5',
mRNA sequence
Length = 407
Score = 127 bits (273), Expect(2) = 9e-055
Identities = 55/66 (83%), Positives = 61/66 (92%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRA VDAPDM R +MNFKRLSLT
Sbjct: 45 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIKMNFKRLSLT 224
Query: 238 DIKIDI 255
DI IDI
Sbjct: 225 DIVIDI 242
Score = 108 bits (230), Expect(2) = 9e-055
Identities = 43/54 (79%), Positives = 50/54 (92%)
Frame = +1 / +2
Query: 259 RVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
RVPKK LI+ ME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+
Sbjct: 245 RVPKKKALIEEMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 406
Score = 91.3 bits (193), Expect(2) = 6e-037
Identities = 46/80 (57%), Positives = 56/80 (70%)
Frame = -2 / -2
Query: 257 LMSILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLL 78
+MS+ +SVR++ LKFI ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL
Sbjct: 244 VMSMTISVRDNLLKFILILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLL 65
Query: 77 NGILAAGGAVSASNTAGRRR 18
I AAG S+ RR
Sbjct: 64 KPIFAAGRLEGLSSECKCRR 5
Score = 85.4 bits (180), Expect(2) = 6e-037
Identities = 40/53 (75%), Positives = 41/53 (77%)
Frame = -2 / -3
Query: 416 LIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTR 258
LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SI+ I FFGTR
Sbjct: 402 LILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSISSIKAFFFGTR 244
>gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-45-P07 5',
mRNA sequence
Length = 374
Score = 212 bits (458), Expect = 8e-054
Identities = 90/109 (82%), Positives = 100/109 (91%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRA VDAPDM R QMNFKRLSLT
Sbjct: 47 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLT 226
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDF 384
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 227 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 373
Score = 168 bits (361), Expect = 2e-040
Identities = 82/124 (66%), Positives = 91/124 (73%)
Frame = -2 / -3
Query: 383 KSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLKFIWQ 204
KSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SVR++ LKFIW
Sbjct: 372 KSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLKFIWI 193
Query: 203 RTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAVSASNTAGR 24
++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG S+
Sbjct: 192 LSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAGRLEGLSSECKC 13
Query: 23 RRAT 12
RRAT
Sbjct: 12 RRAT 1
>emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZH01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 586
Score = 211 bits (455), Expect = 2e-053
Identities = 91/120 (75%), Positives = 102/120 (85%)
Frame = +1 / +2
Query: 76 FKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKIDI 255
FKRFV IG VALVNYG++YG+LVVIVDVVDQNRALVDAP M + QMNFKR LTDI I I
Sbjct: 5 FKRFVGIGGVALVNYGEDYGKLVVIVDVVDQNRALVDAP*MEKIQMNFKRFFLTDIVIYI 184
Query: 256 KRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIR 435
RVPKK I AME+ADVK+KWE SSWG+KLI QK+RA+LNDFDRFK+MLAKIKR G +R
Sbjct: 185 NRVPKKKVFI*AMEKADVKNKWEKSSWGRKLIFQKKRAALNDFDRFKIMLAKIKRAGILR 364
Score = 159 bits (342), Expect = 8e-038
Identities = 78/116 (67%), Positives = 85/116 (73%)
Frame = -2 / -2
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LLI ANM LNLSKSL AL F* ISFLPHELFSHL TSA SIA I F GT L+ +
Sbjct: 354 PALLILANMILNLSKSLRAALFF*KISFLPHELFSHLFLTSAFSIA*IKTFFLGTLLI*M 175
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLL 78
MSVR++ LKFIW ++ GAST ALFWSTTST+TT P S P* T AT PI TNLL
Sbjct: 174 TMSVRKNLLKFIWIFSI*GASTSALFWSTTSTITTSFP*SSP*LTSATPPIPTNLL 7
Score = 104 bits (221), Expect = 4e-021
Identities = 52/120 (43%), Positives = 69/120 (57%)
Frame = +3 / +1
Query: 81 EVRGDRASGPCELRQGVWXXXXXXXXXXXEQGSCGCPRHGSLPNELQAAFPD*HQD*H*T 260
E+RGD SG LR+G+W +QG+CGCP +G P+E F *H+ +
Sbjct: 10 EIRGDWGSGAR*LRRGLWKARGYRRCS*PKQGTCGCPLNGENPDEF*EVFSY*HRHLYQQ 189
Query: 261 CPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESITQ*L*QVQGHVGEDQEGWCHQAR 440
+E+ GNG *C +QVG+ MG E SEE+S Q* *QVQ HVG++QEGW + R
Sbjct: 190 SSQEEGFYLGNGEG*C*EQVGKEFMG*ETYFSEEKSCPQ*F*QVQDHVGQNQEGWYFEDR 369
Score = 57.0 bits (118), Expect(4) = 2e-022
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
+IS LHCL++ LL ++ ++N DVS+ KPL++HL H+ GIHK P
Sbjct: 238 NISLLHCLNKNLLLGNSVDINDDVSKKKPLKIHLDFLHLRGIHKCP 101
Score = 41.4 bits (84), Expect(4) = 2e-022
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 435 PDGTTPLDLRQHDLEPVKVIE 373
P T+PLD QHDLEPVK+IE
Sbjct: 364 PQNTSPLDFGQHDLEPVKIIE 302
Score = 38.6 bits (78), Expect(4) = 2e-022
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQ+H* L SSE+ S PM+ PTC HQ
Sbjct: 323 *TCQNH*GQLFSSEK*VSYPMNSFPTCS*HQ 231
Score = 25.4 bits (49), Expect(4) = 2e-022
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / -3
Query: 133 HTPCRSSQGPLARSPRTS* 77
H P RS + PL +SPR S*
Sbjct: 62 HNPRRS*RAPLPQSPRIS* 6
>gb|BP845942.1|BP845942 BP845942 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-E19 5',
mRNA sequence
Length = 407
Score = 140 bits (300), Expect(2) = 2e-053
Identities = 59/73 (80%), Positives = 65/73 (89%)
Frame = +1 / +3
Query: 196 MVRCQMNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASL 375
M R QMNFKRLSLTDI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+L
Sbjct: 189 MERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANL 368
Query: 376 NDFDRFKVMLAKI 414
NDFDRFK+M AKI
Sbjct: 369 NDFDRFKIMWAKI 407
Score = 109 bits (232), Expect(2) = 1e-039
Identities = 50/69 (72%), Positives = 55/69 (79%)
Frame = -2 / -2
Query: 413 IFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSV 234
I A+M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SV
Sbjct: 406 ILAHMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 227
Query: 233 RESRLKFIW 207
R++ LKFIW
Sbjct: 226 RDNLLKFIW 200
Score = 91.3 bits (193), Expect(2) = 2e-053
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAP 192
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRA VDAP
Sbjct: 50 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAP 184
Score = 76.2 bits (160), Expect(2) = 1e-039
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -2 / -3
Query: 194 SGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAVSASNTAGRRRA 15
+GAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG S+ RRA
Sbjct: 186 AGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAGRLEGLSSECKCRRA 7
Query: 14 T 12
T
Sbjct: 6 T 4
>gb|BP864372.1|BP864372 BP864372 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-A16 5',
mRNA sequence
Length = 389
Score = 120 bits (256), Expect(2) = 8e-053
Identities = 51/64 (79%), Positives = 58/64 (90%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRA VDAPDM R QMNFKRLSLT
Sbjct: 45 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLT 224
Query: 238 DIKI 249
+ +
Sbjct: 225 ILSL 236
Score = 109 bits (233), Expect(2) = 8e-053
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +1 / +2
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVM 402
DI IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFDRFK+M
Sbjct: 224 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIM 388
Score = 92.3 bits (195), Expect(2) = 1e-037
Identities = 45/74 (60%), Positives = 52/74 (70%)
Frame = -2 / -2
Query: 236 VRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAG 57
VR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG
Sbjct: 223 VRDNLLKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAG 44
Query: 56 GAVSASNTAGRRRA 15
S+ RRA
Sbjct: 43 RLEGLSSECKCRRA 2
Score = 86.8 bits (183), Expect(2) = 1e-037
Identities = 41/55 (74%), Positives = 43/55 (78%)
Frame = -2 / -3
Query: 401 MTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMS 237
M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +S
Sbjct: 387 MILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTIS 223
>gb|BP843110.1|BP843110 BP843110 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-56-P11 5',
mRNA sequence
Length = 396
Score = 209 bits (450), Expect = 1e-052
Identities = 89/114 (78%), Positives = 100/114 (87%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
P AKM FKR+VEIGRVALVN G+++G+LVVIVDVVDQNRA VDAPDM R QMNFKRLSLT
Sbjct: 53 PGAKMGFKRYVEIGRVALVN*GEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLT 232
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKV 399
DI IDI RVPKK I+A E+ADVK+KWE SSWG+KLIVQKRRA+LND DRFK+
Sbjct: 233 DIVIDINRVPKKKAWIEAREKADVKNKWEKSSWGRKLIVQKRRANLNDLDRFKI 394
Score = 175 bits (376), Expect = 2e-042
Identities = 85/130 (65%), Positives = 95/130 (73%)
Frame = -2 / -1
Query: 401 MTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESR 222
M LNLSKSL AL F TISFLPHELFSHL FTSA S+A I FFGTRLMS+ +SVR++
Sbjct: 396 MILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSLASIQAFFFGTRLMSMTISVRDNL 217
Query: 221 LKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAVSA 42
LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I A G
Sbjct: 216 LKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAPGRLEGL 37
Query: 41 SNTAGRRRAT 12
S+ RRAT
Sbjct: 36 SSECKCRRAT 7
>gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-74-O20 5',
mRNA sequence
Length = 381
Score = 207 bits (447), Expect = 3e-052
Identities = 88/108 (81%), Positives = 99/108 (91%)
Frame = +1 / +1
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVN+G+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLT
Sbjct: 52 PAAKMGFKRYVEIGRVALVNHGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLT 231
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLND 381
DI IDI RVPKK I+AME+ADVK+KWE SSWG+KLIVQKRRA+LND
Sbjct: 232 DIVIDINRVPKKKAWIEAMEKADVKNKWEKSSWGRKLIVQKRRANLND 375
Score = 164 bits (352), Expect = 3e-039
Identities = 80/123 (65%), Positives = 89/123 (72%)
Frame = -2 / -2
Query: 380 SLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLKFIWQR 201
SL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SVR++ LKFIW
Sbjct: 374 SLRLALRFCTISFLPHELFSHLFFTSAFSIASIQAFFFGTRLMSMTISVRDNLLKFIWIL 195
Query: 200 TMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAVSASNTAGRR 21
++SGAST+ALFWSTTST+TT P S P FT AT PIST LL I AAG S+ R
Sbjct: 194 SISGASTKALFWSTTSTITTSFP*SSPWFTSATLPISTYLLKPIFAAGRLEGLSSECKCR 15
Query: 20 RAT 12
RAT
Sbjct: 14 RAT 6
>gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-G07 5',
mRNA sequence
Length = 393
Score = 180 bits (388), Expect(2) = 1e-051
Identities = 75/100 (75%), Positives = 88/100 (88%)
Frame = +1 / +2
Query: 124 KEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKIDIKRVPKKTTLIKAMEEA 303
++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI IDI RVPKK I+AME+A
Sbjct: 80 EDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVWIEAMEKA 259
Query: 304 DVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
DVK+KWE SSWG+KL+V+KRRA+LNDFDRFK+ML + + G
Sbjct: 260 DVKNKWEKSSWGRKLMVKKRRAALNDFDRFKIMLGQNQEG 379
Score = 140 bits (301), Expect(2) = 1e-035
Identities = 65/97 (67%), Positives = 73/97 (75%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
P + +M LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I F GT L+S+
Sbjct: 378 PS*FWPSMILNLSKSLRAALLFFTISFLPHELFSHLFFTSAFSIASIQTFFLGTLLISMT 199
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRP 132
MSVR++ KFIW +MSGAST ALFWSTTST+TT P
Sbjct: 198 MSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP 88
Score = 45.1 bits (92), Expect(2) = 1e-051
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGK 126
AKM FKRFVE+GRVALVNYG+
Sbjct: 19 AKMGFKRFVEMGRVALVNYGR 81
Score = 31.8 bits (63), Expect(2) = 1e-035
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 122 P*FTRATRPISTNLLNGILA 63
P* T AT PISTNLL ILA
Sbjct: 77 P*LTSATLPISTNLLKPILA 18
>gb|BP856452.1|BP856452 BP856452 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-30-A19 5',
mRNA sequence
Length = 415
Score = 140 bits (301), Expect(3) = 1e-050
Identities = 58/73 (79%), Positives = 65/73 (89%)
Frame = +1 / +1
Query: 208 QMNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFD 387
QMNFKRLSLTDI IDI RVPKK I+AME+ADVK+KWE SSWG+KLIVQKRRA+LNDFD
Sbjct: 193 QMNFKRLSLTDIVIDINRVPKKKASIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFD 372
Query: 388 RFKVMLAKIKRGG 426
RFK+MLA IK+ G
Sbjct: 373 RFKIMLANIKKAG 411
Score = 107 bits (229), Expect(2) = 2e-031
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = -2 / -3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P + ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 410 PAFFMLANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIEAFFFGTRLMSM 231
Query: 245 LMSVRESRLKFI 210
+SVR++ LKFI
Sbjct: 230 TISVRDNLLKFI 195
Score = 72.1 bits (151), Expect(3) = 1e-050
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +1 / +3
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQ 168
P AKM FKR+VEIGRVALVNYG+++G+LVVIVDVVD+
Sbjct: 45 PGAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDR 155
Score = 50.6 bits (104), Expect(2) = 2e-031
Identities = 28/50 (56%), Positives = 30/50 (60%)
Frame = -2 / -1
Query: 164 STTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAVSASNTAGRRRA 15
STTST+TT P S P*FT AT PIST LL I A G S+ RRA
Sbjct: 151 STTSTITTSFP*SSP*FTSATLPISTYLLKPIFAPGRLEGLSSECKCRRA 2
Score = 28.1 bits (55), Expect(3) = 1e-050
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 166 QNRALVDAPDMVR 204
QNR LVDAPDM R
Sbjct: 152 QNRGLVDAPDMER 190
>gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-G16 5',
mRNA sequence
Length = 384
Score = 201 bits (433), Expect = 2e-050
Identities = 86/105 (81%), Positives = 96/105 (91%)
Frame = +1 / +1
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRA VDAPDM R QMNFKRLSLTD
Sbjct: 52 AAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLTD 231
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASL 375
I IDI RVPKK LI+AME+ADVK+KWE SSWG+KLIVQKRRA+L
Sbjct: 232 IVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRATL 366
Score = 156 bits (335), Expect = 7e-037
Identities = 73/103 (70%), Positives = 81/103 (78%)
Frame = -2 / -2
Query: 368 ALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLKFIWQRTMSG 189
AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+ +SVR++ LKFIW ++SG
Sbjct: 359 ALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLKFIWILSISG 180
Query: 188 ASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAA 60
AST+ALFWSTTST+TT P S P*FT AT PIST LL I AA
Sbjct: 179 ASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAA 51
>gb|T22860.1|T22860 4868 Lambda-PRL2 Arabidopsis thaliana cDNA clone 107M11T7, mRNA
sequence
Length = 449
Score = 200 bits (432), Expect = 3e-050
Identities = 86/106 (81%), Positives = 95/106 (89%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R MNFKRLSLT
Sbjct: 23 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIXMNFKRLSLT 202
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASL 375
DI IDI RVPKK LI+AM ADVK+KWE SSWG+KLIVQKRRA+L
Sbjct: 203 DIVIDINRVPKKKALIEAMXXADVKNKWEKSSWGRKLIVQKRRANL 340
Score = 152 bits (326), Expect = 1e-035
Identities = 71/104 (68%), Positives = 79/104 (75%)
Frame = -2 / -3
Query: 368 ALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLKFIWQRTMSG 189
AL F TISFLPHELFSHL TSA IA I FFGTRLMS+ +SVR++ LKF W ++SG
Sbjct: 333 ALRFCTISFLPHELFSHLFXTSAFXIASIKAFFFGTRLMSMTISVRDNLLKFXWILSISG 154
Query: 188 ASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAG 57
AST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG
Sbjct: 153 ASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAG 22
>gb|BP856130.1|BP856130 BP856130 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-P08 5',
mRNA sequence
Length = 400
Score = 130 bits (279), Expect(2) = 1e-049
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRA VDAPDM R QMNFKRLSLT
Sbjct: 50 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLT 229
Query: 238 DIKIDIKRVPKK 273
DI IDI K+
Sbjct: 230 DIVIDINPCAKE 265
Score = 102 bits (218), Expect(2) = 2e-037
Identities = 50/82 (60%), Positives = 59/82 (71%)
Frame = -2 / -2
Query: 257 LMSILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLL 78
LMS+ +SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL
Sbjct: 249 LMSMTISVRDNLLKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLL 70
Query: 77 NGILAAGGAVSASNTAGRRRAT 12
I AAG S+ RRAT
Sbjct: 69 KPIFAAGRLEGLSSECKCRRAT 4
Score = 88.1 bits (186), Expect(2) = 1e-049
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +1 / +3
Query: 259 RVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFK 396
RVPKK LI+AME+ADVK+KWE S WG+KLIVQKRRA+LNDFDR +
Sbjct: 252 RVPKKKALIEAMEKADVKNKWEKS*WGRKLIVQKRRANLNDFDRLR 389
Score = 75.8 bits (159), Expect(2) = 2e-037
Identities = 35/47 (74%), Positives = 37/47 (78%)
Frame = -2 / -1
Query: 395 LNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRL 255
LNLSKSL AL F TISFLPH+LFSHL FTSA SIA I FFGTR+
Sbjct: 388 LNLSKSLRLALRFCTISFLPHQLFSHLFFTSAFSIASIKAFFFGTRV 248
>gb|BP860765.1|BP860765 BP860765 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-45-D14 5',
mRNA sequence
Length = 381
Score = 116 bits (248), Expect(2) = 3e-048
Identities = 48/61 (78%), Positives = 54/61 (88%)
Frame = +1 / +1
Query: 208 QMNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFD 387
QMNFKRLSLTD+ IDI RVPKK LI+A E+ADVK+KWE SSWG+KLIVQKRRA+LND D
Sbjct: 199 QMNFKRLSLTDMVIDINRVPKKKALIEAREKADVKNKWEKSSWGRKLIVQKRRANLNDLD 378
Query: 388 R 390
R
Sbjct: 379 R 381
Score = 97.7 bits (207), Expect(2) = 3e-048
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVR 204
PAAKM FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRA VDAPDM R
Sbjct: 50 PAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMER 196
Score = 92.7 bits (196), Expect(2) = 2e-035
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = -2 / -2
Query: 389 LSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLKFI 210
LSKSL AL F TISFLPHELFSHL FTSA S+A I FFGTRLMS+ +SVR++ LKFI
Sbjct: 380 LSKSLRLALRFCTISFLPHELFSHLFFTSAFSLASIKAFFFGTRLMSMTISVRDNLLKFI 201
Score = 78.5 bits (165), Expect(2) = 2e-035
Identities = 39/63 (61%), Positives = 44/63 (69%)
Frame = -2 / -1
Query: 200 TMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAVSASNTAGRR 21
++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL I AAG S+ R
Sbjct: 192 SISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAAGRLEGLSSECKCR 13
Query: 20 RAT 12
RAT
Sbjct: 12 RAT 4
>gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-10-C13 5',
mRNA sequence
Length = 359
Score = 135 bits (290), Expect(3) = 6e-048
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = +1 / +2
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
AKM F+RFVEIGRVALVNYG++YG+LVVIVDVVDQNRALVDAPDM R QMN KRLSLTDI
Sbjct: 14 AKMGFERFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 193
Query: 244 KIDIKRVPKK 273
IDI RVP++
Sbjct: 194 VIDINRVPRR 223
Score = 96.4 bits (204), Expect(3) = 3e-031
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = -2 / -3
Query: 275 VFFGTRLMSILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRP 96
+ GT L+S+ MSVR++ KFIW +MSGAST ALFWSTTST+TT P S P* T AT P
Sbjct: 225 LLLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLP 46
Query: 95 ISTNLLNGILA 63
ISTNL ILA
Sbjct: 45 ISTNLSKPILA 13
Score = 48.7 bits (100), Expect(3) = 6e-048
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1 / +1
Query: 268 KKTTLIKAMEEADVKSKWENSSWGKK 345
KK LI+A E+ADVK+KWE SSWG+K
Sbjct: 217 KKKVLIEAREKADVKNKWEKSSWGRK 294
Score = 47.3 bits (97), Expect(3) = 6e-048
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 346 LIVQKRRASLNDFDRFKVMLA 408
LIVQKRRA+LNDFDRFK+MLA
Sbjct: 296 LIVQKRRAALNDFDRFKIMLA 358
Score = 44.1 bits (90), Expect(3) = 3e-031
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2 / -1
Query: 344 FLPHELFSHLLFTSASSIALISVVF 270
FLPHELFSHL FTSA S+A I F
Sbjct: 293 FLPHELFSHLFFTSAFSLASIKTFF 219
Score = 35.0 bits (70), Expect(3) = 3e-031
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 407 ANMTLNLSKSLSDALLF*TISF 342
ANM LNLSKSL ALLF TI F
Sbjct: 357 ANMILNLSKSLRAALLFCTIRF 292
>gb|BP821710.1|BP821710 BP821710 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-58-P21 5',
mRNA sequence
Length = 392
Score = 167 bits (360), Expect(2) = 6e-047
Identities = 71/91 (78%), Positives = 81/91 (89%)
Frame = +1 / +1
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
PA KM KR+VE+GRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSL+
Sbjct: 49 PAGKMGLKRYVEMGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERMQMNFKRLSLS 228
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENS 330
DI IDI RVPKK LI+AME+ADVK+KWE S
Sbjct: 229 DIVIDINRVPKKKALIEAMEKADVKNKWEKS 321
Score = 125 bits (268), Expect(2) = 3e-030
Identities = 59/92 (64%), Positives = 69/92 (75%)
Frame = -2 / -1
Query: 332 ELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLKFIWQRTMSGASTRALFWSTTS 153
+LFSHL FTSA SIA I FFGTRLMS+ +S+R++ LKFI ++SGAST+ALFWSTTS
Sbjct: 323 QLFSHLFFTSAFSIASIKAFFFGTRLMSMTISLRDNLLKFICILSISGASTKALFWSTTS 144
Query: 152 TMTTRRPYSLP*FTRATRPISTNLLNGILAAG 57
T+TT P S P*FT AT PIST L I AG
Sbjct: 143 TITTSFP*SSP*FTSATLPISTYLFKPIFPAG 48
Score = 42.3 bits (86), Expect(2) = 6e-047
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1 / +3
Query: 334 WGKKLIVQKRRASLNDFDRFKV 399
WG+K+I QKRRA++ND DR K+
Sbjct: 324 WGRKIIAQKRRANINDLDRCKI 389
Score = 28.6 bits (56), Expect(2) = 3e-030
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 395 LNLSKSLSDALLF*TISFLPH 333
L+LSKSL AL F I FLPH
Sbjct: 385 LHLSKSLMLALRFCAIIFLPH 323
>gb|BP867797.1|BP867797 BP867797 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-82-D21 5',
mRNA sequence
Length = 387
Score = 189 bits (408), Expect = 6e-047
Identities = 81/111 (72%), Positives = 91/111 (81%)
Frame = +1 / +2
Query: 58 PAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLT 237
P AKM FKR+VEIGRVALVNYG+++G+LVVIV+VVDQNRA VDAPDM R QMN KRLSLT
Sbjct: 50 PGAKMGFKRYVEIGRVALVNYGEDHGKLVVIVEVVDQNRAWVDAPDMERIQMNLKRLSLT 229
Query: 238 DIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDR 390
DI IDI RVPKK I+AME+ DVK KWE SSWG+KLIV +L DFDR
Sbjct: 230 DIVIDINRVPKKKASIEAMEKGDVKKKWEKSSWGRKLIVHTVPGNLKDFDR 382
Score = 152 bits (327), Expect = 9e-036
Identities = 72/114 (63%), Positives = 81/114 (71%)
Frame = -2 / -1
Query: 353 TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLKFIWQRTMSGASTRA 174
TISFLPHELFSH FTS SIA I FFGTRLMS+ +SVR++ KFIW ++SGAST+A
Sbjct: 345 TISFLPHELFSHFFFTSPFSIASIEAFFFGTRLMSMTISVRDNLFKFIWILSISGASTQA 166
Query: 173 LFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAAGGAVSASNTAGRRRAT 12
LFWSTTST+TT P S P*FT AT PIST LL I A G S+ RRAT
Sbjct: 165 LFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFAPGRLEGLSSECKCRRAT 4
>gb|BP799467.1|BP799467 BP799467 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-11-D15 5',
mRNA sequence
Length = 412
Score = 116 bits (247), Expect(3) = 5e-046
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +1 / +3
Query: 67 KMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
K FKR+VEIGRVALVNYG+++G+LVVIVDVVDQNRALVDAPDM R QMNFKRLSLTD
Sbjct: 57 KWAFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTD 230
Score = 86.3 bits (182), Expect(3) = 5e-046
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = +1 / +1
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLND 381
L I IDI RVPKK I+AME+ADVK+KWE SSWG+KLIV KRRA+LND
Sbjct: 223 LPTIVIDINRVPKKKAWIEAMEKADVKNKWEKSSWGRKLIVHKRRANLND 372
Score = 84.0 bits (177), Expect(3) = 3e-031
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -2 / -1
Query: 239 SVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLL 78
SVR++ LKFIW ++SGAST+ALFWSTTST+TT P S P*FT AT PIST LL
Sbjct: 229 SVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLL 68
Score = 70.7 bits (148), Expect(3) = 3e-031
Identities = 33/46 (71%), Positives = 35/46 (76%)
Frame = -2 / -3
Query: 383 KSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
+SL AL TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 374 RSLRLALRLCTISFLPHELFSHLFFTSAFSIASIQAFFFGTRLMSM 237
Score = 23.1 bits (44), Expect(3) = 5e-046
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 390 VQGHVGEDQE 419
VQ HVG+DQE
Sbjct: 383 VQDHVGQDQE 412
Score = 21.7 bits (41), Expect(3) = 3e-031
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 417 LDLRQHDLEP 388
LDL HDLEP
Sbjct: 410 LDLGPHDLEP 381
>gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB033c09F 3', mRNA sequence
Length = 476
Score = 185 bits (398), Expect = 1e-045
Identities = 77/94 (81%), Positives = 85/94 (90%)
Frame = +1 / -2
Query: 160 VDQNRALVDAPDMVRCQMNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWG 339
VDQNRALVDAPDM R QMNFKRLSLTDI IDI RVPKK LI+AME+ADVK+KWE SSWG
Sbjct: 475 VDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWG 296
Query: 340 KKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQE 441
+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQE
Sbjct: 295 RKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQE 194
Score = 141 bits (303), Expect = 2e-032
Identities = 64/89 (71%), Positives = 71/89 (79%)
Frame = -2 / +3
Query: 425 PPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSI 246
P LI ANM LNLSKSL AL F TISFLPHELFSHL FTSA SIA I FFGTRLMS+
Sbjct: 210 PAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSM 389
Query: 245 LMSVRESRLKFIWQRTMSGASTRALFWST 159
+SVR++ LKFIW ++SGAST+ALFWST
Sbjct: 390 TISVRDNLLKFIWILSISGASTKALFWST 476
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,149,066,132
Number of Sequences: 1013581
Number of extensions: 12296960
Number of successful extensions: 98989
Number of sequences better than 1.0e-020: 121
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 43018600290
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)