TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738931.2.11
(609 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV822757.1|AV822757 AV822757 RAFL5 Arabidopsis thaliana ... 143 2e-048
gb|AY052313.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA... 143 2e-048
ref|NM_127532.2| Arabidopsis thaliana structural constituen... 143 2e-048
gb|AV783588.1|AV783588 AV783588 RAFL5 Arabidopsis thaliana ... 143 2e-048
gb|AY054616.1| Arabidopsis thaliana 60S ribosomal protein L... 143 2e-048
emb|BX821878.1|CNS0A8AF Arabidopsis thaliana Full-length cD... 143 2e-048
gb|AY061893.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA... 137 1e-046
gb|AY072459.1| Arabidopsis thaliana 60S ribosomal protein L... 137 1e-046
gb|AY085397.1| Arabidopsis thaliana clone 14992 mRNA, compl... 133 6e-046
gb|AY124821.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA... 133 6e-046
ref|NM_118756.3| Arabidopsis thaliana structural constituen... 132 9e-046
gb|AV823312.1|AV823312 AV823312 RAFL5 Arabidopsis thaliana ... 133 9e-046
gb|AF162852.1|AF162852 AF162852 Arabidopsis thaliana germin... 133 9e-046
ref|NM_125054.1| Arabidopsis thaliana structural constituen... 133 9e-046
gb|AV781856.1|AV781856 AV781856 RAFL4 Arabidopsis thaliana ... 133 9e-046
gb|CB264052.1|CB264052 93-E020824-035-001-A01S-T7R MPIZ-ADI... 133 9e-046
gb|CB265195.1|CB265195 01-E013840-035-001-A01-T7R MPIZ-ADIS... 133 9e-046
gb|AV784252.1|AV784252 AV784252 RAFL5 Arabidopsis thaliana ... 133 9e-046
gb|AY050393.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA... 133 9e-046
gb|BP560567.2|BP560567 BP560567 RAFL4 Arabidopsis thaliana ... 133 9e-046
gb|AY085228.1| Arabidopsis thaliana clone 14013 mRNA, compl... 132 9e-046
gb|AI999687.1|AI999687 701557041 A. thaliana, Columbia Col-... 133 9e-046
gb|CB258758.1|CB258758 16-E011797-014-004-O03-T7R MPIZ-ADIS... 133 9e-046
gb|CB258760.1|CB258760 16-E011801-014-004-O03-T7R MPIZ-ADIS... 133 9e-046
emb|AX506072.1| Sequence 767 from Patent WO0216655 132 2e-045
gb|BT005841.1| Arabidopsis thaliana At4g26230 gene, complet... 132 2e-045
gb|BE038115.1|BE038115 AA09A10 AA Arabidopsis thaliana cDNA... 133 3e-045
emb|BX829225.1|CNS0A2K3 Arabidopsis thaliana Full-length cD... 132 4e-045
gb|AU236156.1|AU236156 AU236156 RAFL14 Arabidopsis thaliana... 126 4e-044
gb|BP820602.1|BP820602 BP820602 RAFL19 Arabidopsis thaliana... 143 3e-043
gb|BP828179.1|BP828179 BP828179 RAFL19 Arabidopsis thaliana... 143 1e-042
gb|AA712129.1|AA712129 31857 Lambda-PRL2 Arabidopsis thalia... 133 1e-042
gb|AA712833.1|AA712833 32392 Lambda-PRL2 Arabidopsis thalia... 127 2e-042
gb|BP865718.1|BP865718 BP865718 RAFL21 Arabidopsis thaliana... 143 1e-041
emb|BX827089.1|CNS0A3AD Arabidopsis thaliana Full-length cD... 131 1e-041
gb|BP858909.1|BP858909 BP858909 RAFL21 Arabidopsis thaliana... 130 4e-041
gb|BP804077.1|BP804077 BP804077 RAFL14 Arabidopsis thaliana... 141 5e-041
gb|BP635854.1|BP635854 BP635854 RAFL18 Arabidopsis thaliana... 113 3e-040
gb|BP848402.1|BP848402 BP848402 RAFL21 Arabidopsis thaliana... 138 2e-039
gb|AI994297.1|AI994297 701502419 A. thaliana, Ohio State cl... 127 3e-039
gb|BP842450.1|BP842450 BP842450 RAFL21 Arabidopsis thaliana... 143 3e-039
gb|BP855065.1|BP855065 BP855065 RAFL21 Arabidopsis thaliana... 141 2e-038
gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F2... 87 5e-038
gb|BP861409.1|BP861409 BP861409 RAFL21 Arabidopsis thaliana... 78 3e-037
gb|BP803849.1|BP803849 BP803849 RAFL14 Arabidopsis thaliana... 143 7e-037
gb|BP845867.1|BP845867 BP845867 RAFL21 Arabidopsis thaliana... 136 2e-036
gb|AV824595.1|AV824595 AV824595 RAFL6 Arabidopsis thaliana ... 143 3e-036
gb|BP566406.1|BP566406 BP566406 RAFL14 Arabidopsis thaliana... 104 3e-036
gb|BP803061.1|BP803061 BP803061 RAFL14 Arabidopsis thaliana... 94 3e-036
gb|H77007.1|H77007 17438 Lambda-PRL2 Arabidopsis thaliana c... 124 4e-036
gb|BP803774.1|BP803774 BP803774 RAFL14 Arabidopsis thaliana... 140 5e-036
emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome... 84 1e-035
dbj|AB013392.1| Arabidopsis thaliana genomic DNA, chromosom... 86 2e-035
gb|BP587543.1|BP587543 BP587543 RAFL15 Arabidopsis thaliana... 100 2e-035
gb|BP856341.1|BP856341 BP856341 RAFL21 Arabidopsis thaliana... 138 2e-035
gb|BP825438.1|BP825438 BP825438 RAFL19 Arabidopsis thaliana... 123 2e-035
emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosom... 84 4e-035
gb|AA712836.1|AA712836 32395 Lambda-PRL2 Arabidopsis thalia... 143 2e-034
gb|BP828143.1|BP828143 BP828143 RAFL19 Arabidopsis thaliana... 133 4e-034
gb|AV789868.1|AV789868 AV789868 RAFL6 Arabidopsis thaliana ... 93 7e-034
gb|BP816300.1|BP816300 BP816300 RAFL19 Arabidopsis thaliana... 133 9e-034
gb|AA712793.1|AA712793 32352 Lambda-PRL2 Arabidopsis thalia... 133 2e-033
gb|BP833535.1|BP833535 BP833535 RAFL19 Arabidopsis thaliana... 78 8e-033
gb|AA713212.1|AA713212 32772 Lambda-PRL2 Arabidopsis thalia... 116 1e-032
gb|R30337.1|R30337 12942 Lambda-PRL2 Arabidopsis thaliana c... 120 2e-032
gb|BP803340.1|BP803340 BP803340 RAFL14 Arabidopsis thaliana... 109 6e-032
gb|BP819737.1|BP819737 BP819737 RAFL19 Arabidopsis thaliana... 133 6e-032
gb|BP580505.1|BP580505 BP580505 RAFL14 Arabidopsis thaliana... 73 7e-032
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 84 2e-031
gb|BZ379341.1|BZ379341 SALK_113204.32.60.x Arabidopsis thal... 85 2e-031
gb|AA042257.1|AA042257 24578 CD4-13 Arabidopsis thaliana cD... 138 2e-031
gb|BP839412.1|BP839412 BP839412 RAFL19 Arabidopsis thaliana... 130 3e-031
gb|CL476153.1|CL476153 SAIL_24_F05.v1 SAIL Collection Arabi... 86 5e-031
gb|CC057233.1|CC057233 SALK_114266.36.25.x Arabidopsis thal... 86 5e-031
gb|BP565757.1|BP565757 BP565757 RAFL14 Arabidopsis thaliana... 84 5e-031
gb|BP567792.1|BP567792 BP567792 RAFL14 Arabidopsis thaliana... 82 1e-030
gb|BP633575.1|BP633575 BP633575 RAFL17 Arabidopsis thaliana... 82 2e-030
gb|AV828556.1|AV828556 AV828556 RAFL9 Arabidopsis thaliana ... 133 2e-030
gb|B67505.1|B67505 T25A7TR.1 TAMU Arabidopsis thaliana geno... 87 3e-030
gb|BE526625.1|BE526625 M66E03STM Arabidopsis developing see... 132 1e-029
gb|AA394387.1|AA394387 25970 Lambda-PRL2 Arabidopsis thalia... 128 1e-028
gb|BP648420.1|BP648420 BP648420 RAFL19 Arabidopsis thaliana... 75 1e-028
gb|CF652392.1|CF652392 52-L020577-066-004-G13-SP6P MPIZ-ADI... 73 9e-028
gb|BP577765.1|BP577765 BP577765 RAFL14 Arabidopsis thaliana... 64 1e-027
gb|BP576624.1|BP576624 BP576624 RAFL14 Arabidopsis thaliana... 73 1e-027
gb|BP840308.1|BP840308 BP840308 RAFL19 Arabidopsis thaliana... 112 1e-027
emb|CR934996.1| Arabidopsis thaliana T-DNA flanking sequenc... 86 3e-027
gb|BP587821.1|BP587821 BP587821 RAFL15 Arabidopsis thaliana... 82 3e-027
gb|BP833745.1|BP833745 BP833745 RAFL19 Arabidopsis thaliana... 109 3e-027
gb|BP853859.1|BP853859 BP853859 RAFL21 Arabidopsis thaliana... 93 1e-026
emb|CR934995.1| Arabidopsis thaliana T-DNA flanking sequenc... 84 2e-026
gb|BP624283.1|BP624283 BP624283 RAFL17 Arabidopsis thaliana... 88 3e-026
gb|BP818091.1|BP818091 BP818091 RAFL19 Arabidopsis thaliana... 106 6e-026
gb|BZ769602.1|BZ769602 SALK_142432.30.60.x Arabidopsis thal... 72 1e-025
gb|BP843332.1|BP843332 BP843332 RAFL21 Arabidopsis thaliana... 81 3e-025
gb|BP630592.1|BP630592 BP630592 RAFL17 Arabidopsis thaliana... 73 4e-025
gb|BP570485.1|BP570485 BP570485 RAFL14 Arabidopsis thaliana... 73 4e-025
gb|BP630409.1|BP630409 BP630409 RAFL17 Arabidopsis thaliana... 80 5e-025
gb|BP838498.1|BP838498 BP838498 RAFL19 Arabidopsis thaliana... 104 5e-025
gb|BP849012.1|BP849012 BP849012 RAFL21 Arabidopsis thaliana... 95 9e-025
emb|AJ837508.1| Arabidopsis thaliana T-DNA flanking sequenc... 87 1e-024
gb|BP618144.1|BP618144 BP618144 RAFL16 Arabidopsis thaliana... 67 2e-024
gb|BP626959.1|BP626959 BP626959 RAFL17 Arabidopsis thaliana... 77 3e-024
gb|BP641329.1|BP641329 BP641329 RAFL19 Arabidopsis thaliana... 76 6e-024
gb|BP568185.1|BP568185 BP568185 RAFL14 Arabidopsis thaliana... 68 8e-024
gb|BP577450.1|BP577450 BP577450 RAFL14 Arabidopsis thaliana... 72 2e-023
gb|BP651099.1|BP651099 BP651099 RAFL19 Arabidopsis thaliana... 74 3e-023
gb|BP661185.1|BP661185 BP661185 RAFL21 Arabidopsis thaliana... 74 9e-023
gb|T20565.1|T20565 2573 Lambda-PRL2 Arabidopsis thaliana cD... 109 1e-022
gb|BP660137.1|BP660137 BP660137 RAFL19 Arabidopsis thaliana... 65 1e-022
gb|BP576329.1|BP576329 BP576329 RAFL14 Arabidopsis thaliana... 69 1e-022
gb|BP584789.1|BP584789 BP584789 RAFL14 Arabidopsis thaliana... 71 3e-022
gb|AA586188.1|AA586188 28837 Lambda-PRL2 Arabidopsis thalia... 73 5e-022
gb|BP639056.1|BP639056 BP639056 RAFL19 Arabidopsis thaliana... 73 5e-022
gb|BP781832.1|BP781832 BP781832 RAFL7 Arabidopsis thaliana ... 71 2e-021
gb|BP639189.1|BP639189 BP639189 RAFL19 Arabidopsis thaliana... 74 2e-021
gb|AV536563.1|AV536563 AV536563 Arabidopsis thaliana liquid... 71 2e-021
>gb|AV822757.1|AV822757 AV822757 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-11-E13 5',
mRNA sequence
Length = 601
Score = 143 bits (307), Expect(2) = 2e-048
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +3
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 42 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 221
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 222 VDVKLNKQIWSKGI 263
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 247 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 68
Score = 71.2 bits (149), Expect(2) = 2e-048
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 309 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 419
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 376 PSAGISATVTRE 341
>gb|AY052313.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA, complete cds
Length = 593
Score = 143 bits (307), Expect(2) = 2e-048
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +1
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 43 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 222
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 223 VDVKLNKQIWSKGI 264
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 248 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 69
Score = 71.2 bits (149), Expect(2) = 2e-048
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 310 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 420
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 377 PSAGISATVTRE 342
>ref|NM_127532.2| Arabidopsis thaliana structural constituent of ribosome AT2G19740
mRNA, complete cds
Length = 593
Score = 143 bits (307), Expect(2) = 2e-048
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +1
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 43 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 222
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 223 VDVKLNKQIWSKGI 264
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 248 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 69
Score = 71.2 bits (149), Expect(2) = 2e-048
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 310 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 420
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 377 PSAGISATVTRE 342
>gb|AV783588.1|AV783588 AV783588 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-11-E13 3',
mRNA sequence
Length = 562
Score = 143 bits (307), Expect(2) = 2e-048
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / -3
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 521 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 342
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 341 VDVKLNKQIWSKGI 300
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / +1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 316 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 495
Score = 71.2 bits (149), Expect(2) = 2e-048
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / -3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 254 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 144
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 187 PSAGISATVTRE 222
>gb|AY054616.1| Arabidopsis thaliana 60S ribosomal protein L31 (At2g19740;
F6F22.23) mRNA, complete cds
Length = 562
Score = 143 bits (307), Expect(2) = 2e-048
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +2
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 41 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 220
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 221 VDVKLNKQIWSKGI 262
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -2
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 246 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 67
Score = 71.2 bits (149), Expect(2) = 2e-048
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 308 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 418
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 375 PSAGISATVTRE 340
>emb|BX821878.1|CNS0A8AF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL81ZB02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 525
Score = 143 bits (307), Expect(2) = 2e-048
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +1
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 16 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 195
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 196 VDVKLNKQIWSKGI 237
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -2
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 221 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 42
Score = 71.2 bits (149), Expect(2) = 2e-048
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 283 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 393
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 350 PSAGISATVTRE 315
>gb|AY061893.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA, complete cds
Length = 360
Score = 137 bits (294), Expect(2) = 1e-046
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2 / +1
Query: 77 GASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHI 256
G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR+DVKLNK I
Sbjct: 10 GKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQI 189
Query: 257 WSSGI 271
WS GI
Sbjct: 190 WSKGI 204
Score = 112 bits (239), Expect(2) = 1e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -2
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 188 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 9
Score = 71.2 bits (149), Expect(2) = 1e-046
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 250 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 360
Score = 29.0 bits (57), Expect(2) = 1e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 317 PSAGISATVTRE 282
>gb|AY072459.1| Arabidopsis thaliana 60S ribosomal protein L31 (At2g19740;
F6F22.23) mRNA, complete cds
Length = 425
Score = 137 bits (294), Expect(2) = 1e-046
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2 / +1
Query: 77 GASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHI 256
G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR+DVKLNK I
Sbjct: 10 GKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQI 189
Query: 257 WSSGI 271
WS GI
Sbjct: 190 WSKGI 204
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 188 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 9
Score = 71.2 bits (149), Expect(2) = 1e-046
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 250 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 360
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 317 PSAGISATVTRE 282
>gb|AY085397.1| Arabidopsis thaliana clone 14992 mRNA, complete sequence
Length = 600
Score = 133 bits (285), Expect(2) = 6e-046
Identities = 54/62 (87%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVRIDVKLNK IWS
Sbjct: 92 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRIDVKLNKQIWSK 271
Query: 266 GI 271
GI
Sbjct: 272 GI 277
Score = 104 bits (222), Expect(2) = 3e-024
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTSILTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 264 QICLFNFTSILTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 91
Score = 73.0 bits (153), Expect(2) = 6e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 323 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 433
Score = 29.0 bits (57), Expect(2) = 3e-024
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 390 PSAGISATVTRE 355
>gb|AY124821.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA, complete cds
Length = 360
Score = 133 bits (284), Expect(2) = 6e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 19 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 198
Query: 266 GI 271
GI
Sbjct: 199 GI 204
Score = 102 bits (217), Expect(2) = 1e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 191 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 18
Score = 73.0 bits (153), Expect(2) = 6e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 250 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 360
Score = 29.0 bits (57), Expect(2) = 1e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 317 PSAGISATVTRE 282
>ref|NM_118756.3| Arabidopsis thaliana structural constituent of ribosome AT4G26230
mRNA, complete cds
Length = 671
Score = 132 bits (282), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DVKLNK IWS
Sbjct: 92 RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSK 271
Query: 266 GI 271
GI
Sbjct: 272 GI 277
Score = 93.6 bits (198), Expect(2) = 6e-021
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL + TS LTS VP++F ANFLISL+A GAFFL VQ RRL RLMVYSLVTTSSFL
Sbjct: 264 QICLFNLTSTLTSFVPISFSANFLISLIAFGAFFLKVQL*RRL*RLMVYSLVTTSSFL 91
Score = 73.9 bits (155), Expect(2) = 9e-046
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E D* +
Sbjct: 323 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED*TI 439
Score = 29.0 bits (57), Expect(2) = 6e-021
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 390 PSAGISATVTRE 355
>gb|AV823312.1|AV823312 AV823312 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-17-M03 5',
mRNA sequence
Length = 638
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 85 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 264
Query: 266 GI 271
GI
Sbjct: 265 GI 270
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 257 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 84
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 316 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 426
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 383 PSAGISATVTRE 348
>gb|AF162852.1|AF162852 AF162852 Arabidopsis thaliana germinating seeds Arabidopsis
thaliana cDNA clone AtGER20 similar to ribosomal
protein, mRNA sequence
Length = 621
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / -2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 494 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 315
Query: 266 GI 271
GI
Sbjct: 314 GI 309
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / +1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 322 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 495
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / -2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 263 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 153
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 196 PSAGISATVTRE 231
>ref|NM_125054.1| Arabidopsis thaliana structural constituent of ribosome AT5G56710
mRNA, complete cds
Length = 600
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 92 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 271
Query: 266 GI 271
GI
Sbjct: 272 GI 277
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 264 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 91
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 323 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 433
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 390 PSAGISATVTRE 355
>gb|AV781856.1|AV781856 AV781856 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-O09 3',
mRNA sequence
Length = 586
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / -2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 483 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 304
Query: 266 GI 271
GI
Sbjct: 303 GI 298
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / +2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 311 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 484
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / -2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 252 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 142
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 185 PSAGISATVTRE 220
>gb|CB264052.1|CB264052 93-E020824-035-001-A01S-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000A011Q 5-PRIME, mRNA sequence
Length = 578
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 77 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 256
Query: 266 GI 271
GI
Sbjct: 257 GI 262
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 249 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 76
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 308 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 418
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 375 PSAGISATVTRE 340
>gb|CB265195.1|CB265195 01-E013840-035-001-A01-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000A011Q 5-PRIME, mRNA sequence
Length = 575
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 77 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 256
Query: 266 GI 271
GI
Sbjct: 257 GI 262
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 249 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 76
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 308 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 418
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 375 PSAGISATVTRE 340
>gb|AV784252.1|AV784252 AV784252 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-17-M03 3',
mRNA sequence
Length = 571
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / -3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 485 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 306
Query: 266 GI 271
GI
Sbjct: 305 GI 300
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / +1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 313 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 486
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / -3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 254 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 144
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 187 PSAGISATVTRE 222
>gb|AY050393.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA, complete cds
Length = 569
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 86 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 265
Query: 266 GI 271
GI
Sbjct: 266 GI 271
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 258 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 85
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 317 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 427
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 384 PSAGISATVTRE 349
>gb|BP560567.2|BP560567 BP560567 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-O09 5',
mRNA sequence
Length = 540
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 85 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 264
Query: 266 GI 271
GI
Sbjct: 265 GI 270
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 257 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 84
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 316 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 426
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 383 PSAGISATVTRE 348
>gb|AY085228.1| Arabidopsis thaliana clone 14013 mRNA, complete sequence
Length = 537
Score = 132 bits (282), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DVKLNK IWS
Sbjct: 91 RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSK 270
Query: 266 GI 271
GI
Sbjct: 271 GI 276
Score = 93.6 bits (198), Expect(2) = 6e-021
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL + TS LTS VP++F ANFLISL+A GAFFL VQ RRL RLMVYSLVTTSSFL
Sbjct: 263 QICLFNLTSTLTSFVPISFSANFLISLIAFGAFFLKVQL*RRL*RLMVYSLVTTSSFL 90
Score = 73.9 bits (155), Expect(2) = 9e-046
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E D* +
Sbjct: 322 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED*TI 438
Score = 29.0 bits (57), Expect(2) = 6e-021
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 389 PSAGISATVTRE 354
>gb|AI999687.1|AI999687 701557041 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701557041, mRNA sequence
Length = 515
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / -3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 453 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 274
Query: 266 GI 271
GI
Sbjct: 273 GI 268
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / +2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 281 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 454
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / -3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 222 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 112
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 155 PSAGISATVTRE 190
>gb|CB258758.1|CB258758 16-E011797-014-004-O03-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771O034Q 5-PRIME, mRNA sequence
Length = 508
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 54 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 233
Query: 266 GI 271
GI
Sbjct: 234 GI 239
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 226 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 53
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 285 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 395
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 352 PSAGISATVTRE 317
>gb|CB258760.1|CB258760 16-E011801-014-004-O03-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771O034Q 5-PRIME, mRNA sequence
Length = 424
Score = 133 bits (284), Expect(2) = 9e-046
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 54 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 233
Query: 266 GI 271
GI
Sbjct: 234 GI 239
Score = 102 bits (217), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 226 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 53
Score = 73.0 bits (153), Expect(2) = 9e-046
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E D*
Sbjct: 285 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 395
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 352 PSAGISATVTRE 317
>emb|AX506072.1| Sequence 767 from Patent WO0216655
Length = 360
Score = 132 bits (282), Expect(2) = 2e-045
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DVKLNK IWS
Sbjct: 19 RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSK 198
Query: 266 GI 271
GI
Sbjct: 199 GI 204
Score = 93.6 bits (198), Expect(2) = 4e-021
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL + TS LTS VP++F ANFLISL+A GAFFL VQ RRL RLMVYSLVTTSSFL
Sbjct: 191 QICLFNLTSTLTSFVPISFSANFLISLIAFGAFFLKVQL*RRL*RLMVYSLVTTSSFL 18
Score = 72.5 bits (152), Expect(2) = 2e-045
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E D*
Sbjct: 250 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED* 360
Score = 29.0 bits (57), Expect(2) = 4e-021
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 317 PSAGISATVTRE 282
>gb|BT005841.1| Arabidopsis thaliana At4g26230 gene, complete cds
Length = 360
Score = 132 bits (282), Expect(2) = 2e-045
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DVKLNK IWS
Sbjct: 19 RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSK 198
Query: 266 GI 271
GI
Sbjct: 199 GI 204
Score = 93.6 bits (198), Expect(2) = 4e-021
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL + TS LTS VP++F ANFLISL+A GAFFL VQ RRL RLMVYSLVTTSSFL
Sbjct: 191 QICLFNLTSTLTSFVPISFSANFLISLIAFGAFFLKVQL*RRL*RLMVYSLVTTSSFL 18
Score = 72.5 bits (152), Expect(2) = 2e-045
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E D*
Sbjct: 250 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED* 360
Score = 29.0 bits (57), Expect(2) = 4e-021
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 317 PSAGISATVTRE 282
>gb|BE038115.1|BE038115 AA09A10 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 732
Score = 133 bits (284), Expect(2) = 3e-045
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 71 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 250
Query: 266 GI 271
GI
Sbjct: 251 GI 256
Score = 102 bits (217), Expect(2) = 7e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 243 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 70
Score = 71.2 bits (149), Expect(2) = 3e-045
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVT AEIPAEGL GLGTKV++E D*
Sbjct: 302 NDDEDAKEEFFSLVTAAEIPAEGLSGLGTKVIEEED* 412
Score = 26.7 bits (52), Expect(2) = 7e-023
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PSAGISA VTRE
Sbjct: 369 PSAGISAAVTRE 334
>emb|BX829225.1|CNS0A2K3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL82ZG07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 663
Score = 132 bits (282), Expect(2) = 4e-045
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DVKLNK IWS
Sbjct: 84 RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSK 263
Query: 266 GI 271
GI
Sbjct: 264 GI 269
Score = 71.6 bits (150), Expect(2) = 4e-045
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
ND+EDAKEE +SL TVAEIPAEGL GLGTK+++E D* +
Sbjct: 315 NDDEDAKEEFFSLFTVAEIPAEGLSGLGTKIIEEED*TI 431
>gb|AU236156.1|AU236156 AU236156 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-72-E22 5',
mRNA sequence
Length = 577
Score = 126 bits (270), Expect(2) = 4e-044
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTI H+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DVKLNK IWS
Sbjct: 93 RKEEVVTREYTIXXHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSK 272
Query: 266 GI 271
GI
Sbjct: 273 GI 278
Score = 73.9 bits (155), Expect(2) = 4e-044
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E D* +
Sbjct: 324 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED*TI 440
>gb|BP820602.1|BP820602 BP820602 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-55-B08 5',
mRNA sequence
Length = 401
Score = 143 bits (307), Expect(2) = 3e-043
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +1
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 40 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 219
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 220 VDVKLNKQIWSKGI 261
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 245 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 66
Score = 53.8 bits (111), Expect(2) = 3e-043
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2 / +3
Query: 335 KEELYSLVTVAEIPAEGLKGLGTKVV 412
KEE +SLVTVAEIPAEGL GLGTKV+
Sbjct: 324 KEEFFSLVTVAEIPAEGLSGLGTKVI 401
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 373 PSAGISATVTRE 338
>gb|BP828179.1|BP828179 BP828179 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-78-A15 5',
mRNA sequence
Length = 384
Score = 143 bits (307), Expect(2) = 1e-042
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +1
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 46 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 225
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 226 VDVKLNKQIWSKGI 267
Score = 112 bits (239), Expect(2) = 1e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -2
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 251 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 72
Score = 51.9 bits (107), Expect(2) = 1e-042
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGL 388
ND+EDAKEE +SLVTVAEIPAEGL
Sbjct: 313 NDDEDAKEEFFSLVTVAEIPAEGL 384
Score = 29.0 bits (57), Expect(2) = 1e-026
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 380 PSAGISATVTRE 345
>gb|AA712129.1|AA712129 31857 Lambda-PRL2 Arabidopsis thaliana cDNA clone 180E22T7, mRNA
sequence
Length = 515
Score = 133 bits (284), Expect(2) = 1e-042
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 23 RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 202
Query: 266 GI 271
GI
Sbjct: 203 GI 208
Score = 102 bits (217), Expect(2) = 7e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 195 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVHL*RRLWRLMVYSLVITSSFL 22
Score = 62.5 bits (130), Expect(2) = 1e-042
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTK 406
ND+EDAKEE +SLVTVAEIP+EGL GLGTK
Sbjct: 254 NDDEDAKEEFFSLVTVAEIPSEGLSGLGTK 343
Score = 26.7 bits (52), Expect(2) = 7e-023
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 384 PSAGISATVTRE 349
PS GISATVTRE
Sbjct: 321 PSEGISATVTRE 286
>gb|AA712833.1|AA712833 32392 Lambda-PRL2 Arabidopsis thaliana cDNA clone 200P12T7, mRNA
sequence
Length = 507
Score = 127 bits (273), Expect(2) = 2e-042
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEV+TREYTINLH+RLH TFKKKAP AIKEIRKFA+KAMGT DVR+DVKLNK IWS
Sbjct: 25 RKEEVITREYTINLHRRLHKXTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSK 204
Query: 266 GI 271
GI
Sbjct: 205 GI 210
Score = 101 bits (216), Expect(2) = 2e-023
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFL 85
Q+CL +FTS LTS+VP+AF ANFLISLMA GAFFL V RRLWRLMVYSLV TSSFL
Sbjct: 197 QICLFNFTSTLTSLVPIAFSANFLISLMAFGAFFLKVXL*RRLWRLMVYSLVITSSFL 24
Score = 67.0 bits (140), Expect(2) = 2e-042
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVV 412
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV+
Sbjct: 256 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVI 351
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 384 PSAGISATVTRE 349
PSAGISATVTRE
Sbjct: 323 PSAGISATVTRE 288
>gb|BP865718.1|BP865718 BP865718 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-75-D02 5',
mRNA sequence
Length = 379
Score = 143 bits (307), Expect(2) = 1e-041
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +3
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 42 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 221
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 222 VDVKLNKQIWSKGI 263
Score = 112 bits (239), Expect(2) = 6e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 247 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 68
Score = 48.3 bits (99), Expect(2) = 1e-041
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEG 385
ND+EDAKEE +SLVTVAEIP EG
Sbjct: 309 NDDEDAKEEFFSLVTVAEIPGEG 377
Score = 26.7 bits (52), Expect(2) = 6e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 384 PSAGISATVTRE 349
PS GISATVTRE
Sbjct: 376 PSPGISATVTRE 341
>emb|BX827089.1|CNS0A3AD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB93ZD12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 515
Score = 131 bits (280), Expect(3) = 1e-041
Identities = 53/62 (85%), Positives = 55/62 (88%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFAQ MGT DVR+DVKLNK IWS
Sbjct: 46 RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAQNQMGTKDVRVDVKLNKQIWSK 225
Query: 266 GI 271
GI
Sbjct: 226 GI 231
Score = 41.8 bits (85), Expect(3) = 1e-041
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEIP 376
ND+EDAKEE +SLVTVAE+P
Sbjct: 277 NDDEDAKEEFFSLVTVAEMP 336
Score = 37.3 bits (75), Expect(3) = 1e-041
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 353 LVTVAEIPAEGLKGLGTKVVDETD*AV 433
L + + PAEGL GLGTK+++E D* +
Sbjct: 314 LSLLLKCPAEGLSGLGTKIIEEED*TI 394
>gb|BP858909.1|BP858909 BP858909 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-38-O12 5',
mRNA sequence
Length = 393
Score = 130 bits (278), Expect(3) = 4e-041
Identities = 54/73 (73%), Positives = 62/73 (84%)
Frame = +2 / +1
Query: 23 RNPPTRTRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQ 202
R+P +++RGD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA
Sbjct: 19 RSPTPLSKTRGDGSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFAL 198
Query: 203 KAMGTTDVRIDVK 241
KAMGT DVR+DVK
Sbjct: 199 KAMGTKDVRVDVK 237
Score = 102 bits (217), Expect(2) = 7e-029
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -1 / -2
Query: 237 TSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 233 TSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 72
Score = 54.7 bits (113), Expect(3) = 4e-041
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2 / +2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKG 394
ND+EDAKEE +SLVTVAEIPAEGL G
Sbjct: 314 NDDEDAKEEFFSLVTVAEIPAEGLSG 391
Score = 46.9 bits (96), Expect(2) = 7e-029
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = -3 / -3
Query: 385 ALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXDVLVEL 239
+ R+L DGD+G E LGI +IV L G+ +N PR +LVE+
Sbjct: 382 SFSRNLSDGDEGEELFLGIFIIVSLTGNTDSNSPRGTSDTFAPYLLVEV 236
Score = 23.5 bits (45), Expect(3) = 4e-041
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / +2
Query: 236 VKLNKHIWSSGI 271
+ LNK IWS GI
Sbjct: 233 LNLNKQIWSKGI 268
>gb|BP804077.1|BP804077 BP804077 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-32-F20 5',
mRNA sequence
Length = 401
Score = 141 bits (302), Expect(2) = 5e-041
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = +2 / +3
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KA GT DVR
Sbjct: 42 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKARGTKDVR 221
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS+GI
Sbjct: 222 VDVKLNKQIWSTGI 263
Score = 112 bits (240), Expect(2) = 4e-027
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -2
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 247 ICLLSLTSTLTSFVPLAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 68
Score = 48.7 bits (100), Expect(2) = 5e-041
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2 / +2
Query: 335 KEELYSLVTVAEIPAEGLKGLGTKV 409
KEE +SLVTVAEIPAEGL G GTKV
Sbjct: 326 KEEFFSLVTVAEIPAEGLYGWGTKV 400
Score = 30.4 bits (60), Expect(2) = 4e-027
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
+ PSAGISATVTRE
Sbjct: 381 YNPSAGISATVTRE 340
>gb|BP635854.1|BP635854 BP635854 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-02-I18 3',
mRNA sequence
Length = 468
Score = 113 bits (241), Expect(2) = 3e-040
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = +2 / -3
Query: 107 REYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI 271
REYTINLH+RLH CTFKKKAP AI+EIRKFA+K MGT DVR+DVKLN IWS GI
Sbjct: 466 REYTINLHRRLHSCTFKKKAPKAIREIRKFAEKEMGTKDVRVDVKLNNQIWSKGI 302
Score = 73.9 bits (155), Expect(2) = 3e-040
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +2 / -2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E D* +
Sbjct: 257 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED*TI 141
>gb|BP848402.1|BP848402 BP848402 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-05-E04 5',
mRNA sequence
Length = 397
Score = 138 bits (295), Expect(3) = 2e-039
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = +2 / +3
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKA NAIKEIRKF KAMGT DVR
Sbjct: 33 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAANAIKEIRKFGLKAMGTKDVR 212
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 213 VDVKLNKQIWSKGI 254
Score = 107 bits (228), Expect = 3e-022
Identities = 47/60 (78%), Positives = 50/60 (83%)
Frame = -1 / -1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF NFLISLMAL AFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 238 ICLLSLTSTLTSFVPIAFNPNFLISLMALAAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 59
Score = 40.0 bits (81), Expect(3) = 2e-039
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEI 373
ND+EDAKEE +SLVTVAEI
Sbjct: 300 NDDEDAKEEFFSLVTVAEI 356
Score = 24.9 bits (48), Expect(3) = 2e-039
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 380 EGLKGLGTKVVD 415
EGL GLGTKV++
Sbjct: 362 EGLSGLGTKVME 397
>gb|AI994297.1|AI994297 701502419 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701502419, mRNA sequence
Length = 550
Score = 127 bits (272), Expect(3) = 3e-039
Identities = 51/62 (82%), Positives = 55/62 (88%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLH+RLH CTFKKKAP IKEIRKFA+K MGT DVR+DVKL+K IWS
Sbjct: 84 RKEEVVTREYTINLHRRLHSCTFKKKAPKEIKEIRKFAEKEMGTKDVRVDVKLSKQIWSK 263
Query: 266 GI 271
GI
Sbjct: 264 GI 269
Score = 45.5 bits (93), Expect(3) = 3e-039
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 356 VTVAEIPAEGLKGLGTKVVDETD*AV 433
VT AEIPAEGL GLGTK+++E D* +
Sbjct: 355 VTDAEIPAEGLSGLGTKIIEEED*TI 432
Score = 29.0 bits (57), Expect(3) = 3e-039
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSL 355
ND+EDAKEE++SL
Sbjct: 315 NDDEDAKEEIFSL 353
>gb|BP842450.1|BP842450 BP842450 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-54-N18 5',
mRNA sequence
Length = 387
Score = 143 bits (307), Expect(2) = 3e-039
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +3
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 42 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 221
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 222 VDVKLNKQIWSKGI 263
Score = 112 bits (239), Expect(2) = 9e-024
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -3
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 247 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 68
Score = 40.0 bits (81), Expect(2) = 3e-039
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEI 373
ND+EDAKEE +SLVTVAEI
Sbjct: 309 NDDEDAKEEFFSLVTVAEI 365
Score = 19.4 bits (36), Expect(2) = 9e-024
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / -3
Query: 372 ISATVTRE 349
ISATVTRE
Sbjct: 364 ISATVTRE 341
>gb|BP855065.1|BP855065 BP855065 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-25-G14 5',
mRNA sequence
Length = 376
Score = 141 bits (302), Expect(2) = 2e-038
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+ LH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 43 QGDRSKMEKGKGRKEEVVTREYTINLHRHLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 222
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 223 VDVKLNKQIWSKGI 264
Score = 108 bits (231), Expect(2) = 1e-022
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = -1 / -3
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WR LWRL+VYSLVTTSSFL P
Sbjct: 248 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRCLWRLIVYSLVTTSSFLPFP 69
Score = 40.0 bits (81), Expect(2) = 2e-038
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVTVAEI 373
ND+EDAKEE +SLVTVAEI
Sbjct: 310 NDDEDAKEEFFSLVTVAEI 366
Score = 19.4 bits (36), Expect(2) = 1e-022
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / -3
Query: 372 ISATVTRE 349
ISATVTRE
Sbjct: 365 ISATVTRE 342
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete
sequence
Length = 126386
Score = 87.2 bits (184), Expect(4) = 5e-038
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +2 / -2
Query: 149 TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI 271
TFKKKAPNAIKEIRKFA KAMGT DVR+DVKLNK IWS GI
Sbjct: 109327 TFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGI 109205
Score = 71.2 bits (149), Expect(4) = 5e-038
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / -2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E +*
Sbjct: 109159 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 109049
Score = 55.1 bits (114), Expect(4) = 5e-038
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2 / -3
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLH 142
+GD S+ + G RKEEVVTREYTINLH+RLH
Sbjct: 109836 QGDRSKMEKGKGRKEEVVTREYTINLHRRLH 109744
Score = 26.7 bits (52), Expect(4) = 5e-038
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / -1
Query: 543 CMASFLFISATSFSS 587
CM FLF+S TSF S
Sbjct: 13055 CMQGFLFLSRTSFPS 13011
>gb|BP861409.1|BP861409 BP861409 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-47-I09 5',
mRNA sequence
Length = 404
Score = 77.6 bits (163), Expect(3) = 3e-037
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +2 / +2
Query: 149 TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI 271
+FKKKAP AIKEIRKF +K MG DVR+DVKLNK IWS GI
Sbjct: 128 SFKKKAPKAIKEIRKFGEKEMGKKDVRVDVKLNKQIWSKGI 250
Score = 69.8 bits (146), Expect(3) = 3e-037
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD 424
ND+EDAKEE SLVTVAEIPAEGL GLGTK+++E D
Sbjct: 297 NDDEDAKEEFSSLVTVAEIPAEGLSGLGTKIIEEED 404
Score = 48.3 bits (99), Expect(3) = 3e-037
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKK 163
RKEEVVTRE TINLH+RLH C +++
Sbjct: 66 RKEEVVTRE*TINLHRRLHSCPLRRR 143
>gb|BP803849.1|BP803849 BP803849 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-31-F14 5',
mRNA sequence
Length = 363
Score = 143 bits (307), Expect(2) = 7e-037
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +2
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 41 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 220
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 221 VDVKLNKQIWSKGI 262
Score = 112 bits (239), Expect(2) = 2e-026
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -1
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 246 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 67
Score = 32.2 bits (64), Expect(2) = 7e-037
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVT 361
ND+EDAKEE +SLVT
Sbjct: 306 NDDEDAKEEFFSLVT 350
Score = 28.6 bits (56), Expect(2) = 2e-026
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3 / -2
Query: 361 GDKGVEFLLGILLIVPLAGD 302
GD+G E LGI +IV L G+
Sbjct: 350 GDEGEELFLGIFIIVSLTGN 291
>gb|BP845867.1|BP845867 BP845867 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-A22 5',
mRNA sequence
Length = 406
Score = 136 bits (292), Expect(3) = 2e-036
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = +2 / +1
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINL + LH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 61 QGDRSKMEKGKGRKEEVVTREYTINLQRGLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 240
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 241 VDVKLNKQIWSKGI 282
Score = 109 bits (232), Expect = 1e-022
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = -1 / -3
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WR LWRL+VYSLVTTSSFL P
Sbjct: 266 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRPLWRLIVYSLVTTSSFLPFP 87
Score = 32.2 bits (64), Expect(3) = 2e-036
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 317 NDEEDAKEELYSLVT 361
ND+EDAKEE +SLVT
Sbjct: 328 NDDEDAKEEFFSLVT 372
Score = 23.5 bits (45), Expect(3) = 2e-036
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 362 VAEIPAEGLKG 394
VAEIP EGL G
Sbjct: 372 VAEIPGEGLSG 404
>gb|AV824595.1|AV824595 AV824595 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-D05 5',
mRNA sequence
Length = 354
Score = 143 bits (307), Expect(2) = 3e-036
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +2 / +3
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
+GD S+ + G RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR
Sbjct: 42 QGDRSKMEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVR 221
Query: 230 IDVKLNKHIWSSGI 271
+DVKLNK IWS GI
Sbjct: 222 VDVKLNKQIWSKGI 263
Score = 112 bits (239), Expect = 1e-023
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = -1 / -3
Query: 255 MCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDAP 76
+CLLS TS LTS VP+AF ANFLISLMALGAFFL VQ WRRLWRL+VYSLVTTSSFL P
Sbjct: 247 ICLLSLTSTLTSFVPIAFNANFLISLMALGAFFLKVQLWRRLWRLIVYSLVTTSSFLPFP 68
Score = 29.9 bits (59), Expect(2) = 3e-036
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVT 361
ND+EDAKEE SLVT
Sbjct: 309 NDDEDAKEEXXSLVT 353
>gb|BP566406.1|BP566406 BP566406 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-53-L13 3',
mRNA sequence
Length = 447
Score = 104 bits (221), Expect(2) = 3e-036
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +2 / -2
Query: 125 LHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI 271
LH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR+DVKLNK IW+ GI
Sbjct: 446 LHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWTKGI 300
Score = 69.8 bits (146), Expect(2) = 3e-036
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +2 / -2
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD* 427
ND+EDAKEE +SLVT+AEIPAEGL GLGTKV++E +*
Sbjct: 254 NDDEDAKEEFFSLVTLAEIPAEGLSGLGTKVIEEEE* 144
>gb|BP803061.1|BP803061 BP803061 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-27-I08 5',
mRNA sequence
Length = 398
Score = 93.6 bits (198), Expect(3) = 3e-036
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2 / +1
Query: 137 LHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI 271
+H CTFKKKAPNAIKEIRKFA KAMGT DVR+DVK NK IWS GI
Sbjct: 133 VHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKFNKQIWSKGI 267
Score = 51.5 bits (106), Expect(3) = 3e-036
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTK 406
ND+EDAKEE +SL EIPAEGL GLGTK
Sbjct: 309 NDDEDAKEEFFSLPPSHEIPAEGLFGLGTK 398
Score = 46.9 bits (96), Expect(3) = 3e-036
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2 / +2
Query: 50 RGDMSQGKGGASRKEEVVTREYTINLHK 133
+GD S+ + G RKEEVVTREYTINLH+
Sbjct: 44 QGDRSKMEKGKGRKEEVVTREYTINLHQ 127
>gb|H77007.1|H77007 17438 Lambda-PRL2 Arabidopsis thaliana cDNA clone 201L11T7, mRNA
sequence
Length = 503
Score = 124 bits (265), Expect(2) = 4e-036
Identities = 52/62 (83%), Positives = 54/62 (87%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR DVKLNK I S
Sbjct: 83 RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRXDVKLNKQIXSK 262
Query: 266 GI 271
GI
Sbjct: 263 GI 268
Score = 49.2 bits (101), Expect(2) = 4e-036
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2 / +1
Query: 335 KEELYSLVTVAEIPAEGLKGLGTKV 409
+EE +SLVTV EIPAEGL GLGTKV
Sbjct: 334 REEFFSLVTVXEIPAEGLSGLGTKV 408
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,103,309,538
Number of Sequences: 1013581
Number of extensions: 14378160
Number of successful extensions: 211493
Number of sequences better than 1.0e-020: 138
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 36343300245
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)