TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716323.2.1
(724 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY250835.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 269 6e-071
gb|AV520672.1|AV520672 AV520672 Arabidopsis thaliana aboveg... 268 1e-070
gb|AY136459.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 268 1e-070
emb|BX832101.1|CNS0A10J Arabidopsis thaliana Full-length cD... 268 1e-070
ref|NM_125733.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 268 1e-070
gb|BT010394.1| Arabidopsis thaliana At5g63380 mRNA, complet... 267 2e-070
gb|AY376731.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 267 2e-070
gb|AV556332.1|AV556332 AV556332 Arabidopsis thaliana green ... 264 2e-069
gb|BX836241.1|BX836241 BX836241 Arabidopsis thaliana Hormon... 240 4e-062
gb|AF360250.1| Arabidopsis thaliana unknown protein (At1g20... 240 4e-062
gb|AY040047.1| Arabidopsis thaliana unknown protein (At1g20... 240 4e-062
gb|AY250838.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 240 4e-062
emb|BX814596.1|CNS0ADI2 Arabidopsis thaliana Full-length cD... 240 4e-062
ref|NM_101901.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 240 4e-062
emb|BX814621.1|CNS0ADOY Arabidopsis thaliana Full-length cD... 237 2e-061
emb|BX814850.1|CNS0ACYK Arabidopsis thaliana Full-length cD... 235 1e-060
gb|AY091079.1| Arabidopsis thaliana putative 4-coumarate--C... 234 3e-060
gb|AY122950.1| Arabidopsis thaliana putative 4-coumarate--C... 234 3e-060
gb|AY250839.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 234 3e-060
ref|NM_116755.4| Arabidopsis thaliana 4-coumarate-CoA ligas... 234 3e-060
gb|CB074237.1|CB074237 EST00751 Virulent Peronospora parasi... 227 2e-058
gb|BX835589.1|BX835589 BX835589 Arabidopsis thaliana Adult ... 226 4e-058
gb|BT005689.1| Arabidopsis thaliana clone U50818 putative 4... 226 8e-058
gb|AY250832.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 226 8e-058
gb|AY376735.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 226 8e-058
dbj|AK118041.1| Arabidopsis thaliana At5g38120 mRNA for put... 226 8e-058
ref|NM_123172.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 226 8e-058
ref|NM_101898.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 225 2e-057
gb|AY250833.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 223 5e-057
ref|NM_202143.1| Arabidopsis thaliana 4-coumarate-CoA ligas... 126 9e-057
emb|BX813596.1|CNS0ADNX Arabidopsis thaliana Full-length cD... 126 9e-057
dbj|AB023035.1| Arabidopsis thaliana genomic DNA, chromosom... 90 9e-057
emb|BX815999.1|CNS0ADB5 Arabidopsis thaliana Full-length cD... 204 8e-056
emb|BX814177.1|CNS0ADT8 Arabidopsis thaliana Full-length cD... 202 3e-052
emb|BX816812.1|CNS0AD1Q Arabidopsis thaliana Full-length cD... 201 7e-052
gb|AF106088.1|AF106088 Arabidopsis thaliana 4-coumarate:CoA... 198 2e-049
gb|AY058083.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA... 198 2e-049
gb|AY090306.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA... 198 2e-049
emb|AX412572.1| Sequence 336 from Patent WO0222675 198 2e-049
emb|AX506095.1| Sequence 790 from Patent WO0216655 198 2e-049
gb|AY376730.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 198 2e-049
ref|NM_105180.2| Arabidopsis thaliana 4CL3; 4-coumarate-CoA... 198 2e-049
gb|BX835847.1|BX835847 BX835847 Arabidopsis thaliana Hormon... 197 4e-049
dbj|AK117362.1| Arabidopsis thaliana At4g19010 mRNA for put... 196 5e-049
ref|NM_118019.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 196 5e-049
gb|BT005912.1| Arabidopsis thaliana At4g19010 gene, complet... 196 8e-049
gb|AY250834.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 196 8e-049
gb|AY376733.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 196 8e-049
emb|CQ803730.1| Sequence 141 from Patent WO2004035798 196 8e-049
gb|AI997382.1|AI997382 701553708 A. thaliana, Columbia Col-... 195 1e-048
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 116 3e-048
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 84 3e-048
emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosom... 84 4e-048
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 84 4e-048
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 84 4e-048
gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis tha... 84 4e-048
gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis tha... 116 4e-048
emb|AX059540.1| Sequence 273 from Patent WO0055325 84 4e-048
emb|AX461232.1| Sequence 161 from Patent WO0198480 84 4e-048
emb|BX827081.1|CNS0A38R Arabidopsis thaliana Full-length cD... 140 2e-047
gb|AF106086.1|AF106086 Arabidopsis thaliana 4-coumarate:CoA... 190 3e-047
gb|AY099695.1| Arabidopsis thaliana putative 4-coumarate:Co... 190 3e-047
gb|BT000296.1| Arabidopsis thaliana putative 4-coumarate:Co... 190 3e-047
emb|AX505882.1| Sequence 577 from Patent WO0216655 190 3e-047
gb|AY376728.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 190 3e-047
emb|BX822773.1|CNS0A78O Arabidopsis thaliana Full-length cD... 190 3e-047
ref|NM_113019.2| Arabidopsis thaliana 4CL2; 4-coumarate-CoA... 190 3e-047
gb|AI997890.1|AI997890 701671251 A. thaliana, Columbia Col-... 178 8e-046
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 116 1e-045
gb|AY250836.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 183 4e-045
gb|AY376734.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 183 4e-045
ref|NM_104972.1| Arabidopsis thaliana 4-coumarate-CoA ligas... 183 4e-045
gb|AY095992.1| Arabidopsis thaliana AT3g21230/MXL8_9 mRNA, ... 182 8e-045
gb|BT000614.1| Arabidopsis thaliana putative 4-coumarate:Co... 182 8e-045
gb|AY250837.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 182 8e-045
gb|AY376732.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 182 8e-045
emb|BX824168.1|CNS0A6ZK Arabidopsis thaliana Full-length cD... 182 8e-045
emb|BX824573.1|CNS0A6WB Arabidopsis thaliana Full-length cD... 182 8e-045
emb|BX824596.1|CNS0A6SI Arabidopsis thaliana Full-length cD... 182 8e-045
emb|BX822898.1|CNS0A75P Arabidopsis thaliana Full-length cD... 182 8e-045
ref|NM_113018.3| Arabidopsis thaliana catalytic AT3G21230 m... 182 8e-045
ref|NM_179513.1| Arabidopsis thaliana 4CL3; 4-coumarate-CoA... 124 1e-044
gb|U18675.1|ATU18675 Arabidopsis thaliana 4-coumarate--coen... 181 3e-044
gb|AY099747.1| Arabidopsis thaliana 4-coumarate:CoA ligase ... 181 3e-044
emb|AX505869.1| Sequence 564 from Patent WO0216655 181 3e-044
gb|AY376729.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 181 3e-044
emb|BX823111.1|CNS0A76K Arabidopsis thaliana Full-length cD... 181 3e-044
emb|BX815525.1|CNS0AE0I Arabidopsis thaliana Full-length cD... 181 3e-044
ref|NM_104046.2| Arabidopsis thaliana 4CL1 (4-COUMARATE:COA... 181 3e-044
emb|BX814606.1|CNS0ADL5 Arabidopsis thaliana Full-length cD... 179 7e-044
emb|BX823716.1|CNS0A6KI Arabidopsis thaliana Full-length cD... 177 2e-043
emb|BX813547.1|CNS0ADKC Arabidopsis thaliana Full-length cD... 112 1e-041
gb|BP584678.1|BP584678 BP584678 RAFL14 Arabidopsis thaliana... 171 2e-041
gb|BX836070.1|BX836070 BX836070 Arabidopsis thaliana Hormon... 171 3e-041
gb|BP578284.1|BP578284 BP578284 RAFL14 Arabidopsis thaliana... 171 3e-041
gb|AV817533.1|AV817533 AV817533 RAFL9 Arabidopsis thaliana ... 167 4e-040
gb|BX835730.1|BX835730 BX835730 Arabidopsis thaliana Adult ... 125 1e-039
dbj|AB005247.2| Arabidopsis thaliana genomic DNA, chromosom... 72 1e-039
gb|BP664326.1|BP664326 BP664326 RAFL21 Arabidopsis thaliana... 165 2e-039
dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosom... 111 3e-039
gb|AF106085.1|AF106085 Arabidopsis thaliana 4-coumarate:CoA... 111 3e-039
emb|BX825074.1|CNS0A6ZC Arabidopsis thaliana Full-length cD... 161 2e-038
gb|AV810589.1|AV810589 AV810589 RAFL9 Arabidopsis thaliana ... 161 2e-038
gb|AV802214.1|AV802214 AV802214 RAFL9 Arabidopsis thaliana ... 160 3e-038
gb|AV809888.1|AV809888 AV809888 RAFL9 Arabidopsis thaliana ... 160 4e-038
gb|AU230141.1|AU230141 AU230141 RAFL19 Arabidopsis thaliana... 120 5e-038
gb|BP787964.1|BP787964 BP787964 RAFL7 Arabidopsis thaliana ... 157 3e-037
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 106 1e-036
gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsi... 82 1e-036
gb|AV532716.1|AV532716 AV532716 Arabidopsis thaliana flower... 155 2e-036
gb|AV547257.1|AV547257 AV547257 Arabidopsis thaliana roots ... 151 2e-035
gb|BP781469.1|BP781469 BP781469 RAFL7 Arabidopsis thaliana ... 151 2e-035
gb|BP781934.1|BP781934 BP781934 RAFL7 Arabidopsis thaliana ... 151 2e-035
gb|BP564287.1|BP564287 BP564287 RAFL14 Arabidopsis thaliana... 86 9e-035
gb|AF106084.1|AF106084 Arabidopsis thaliana 4-coumarate:CoA... 106 2e-034
gb|AF106087.1|AF106087 Arabidopsis thaliana 4-coumarate:CoA... 80 6e-034
gb|CB255235.1|CB255235 47-E018437-019-009-M11-T7R MPIZ-ADIS... 146 8e-034
gb|BP650654.1|BP650654 BP650654 RAFL19 Arabidopsis thaliana... 145 1e-033
gb|AV558307.1|AV558307 AV558307 Arabidopsis thaliana green ... 144 3e-033
ref|NM_101899.3| Arabidopsis thaliana 4-coumarate-CoA ligas... 111 1e-032
gb|AC009360.3|F16G16 Arabidopsis thaliana chromosome 1 BAC ... 80 6e-032
gb|AV558658.1|AV558658 AV558658 Arabidopsis thaliana green ... 139 1e-031
gb|AI999552.1|AI999552 701556371 A. thaliana, Columbia Col-... 124 2e-031
gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 B... 106 2e-031
gb|BX835771.1|BX835771 BX835771 Arabidopsis thaliana Adult ... 116 1e-030
gb|CB253840.1|CB253840 86-E018437-019-009-K21-T7R MPIZ-ADIS... 135 2e-030
gb|BP793536.1|BP793536 BP793536 RAFL7 Arabidopsis thaliana ... 134 2e-030
emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome ... 78 5e-030
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 78 2e-029
emb|BX814716.1|CNS0ADOJ Arabidopsis thaliana Full-length cD... 121 9e-029
gb|BP584375.1|BP584375 BP584375 RAFL14 Arabidopsis thaliana... 127 9e-029
gb|BP622052.1|BP622052 BP622052 RAFL17 Arabidopsis thaliana... 129 1e-028
gb|AY202973.1|AY202973 AY202973 Arabidopsis thaliana Landsb... 74 4e-028
gb|CL465040.1|CL465040 SAIL_1233_A01.v1 SAIL Collection Ara... 74 3e-027
gb|AV787325.1|AV787325 AV787325 RAFL6 Arabidopsis thaliana ... 121 2e-026
gb|BP590061.1|BP590061 BP590061 RAFL15 Arabidopsis thaliana... 120 4e-026
gb|AV799025.1|AV799025 AV799025 RAFL9 Arabidopsis thaliana ... 119 8e-026
gb|AV524325.1|AV524325 AV524325 Arabidopsis thaliana aboveg... 116 8e-025
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 78 5e-024
gb|AV813168.1|AV813168 AV813168 RAFL9 Arabidopsis thaliana ... 93 7e-024
gb|BP610466.1|BP610466 BP610466 RAFL16 Arabidopsis thaliana... 111 2e-023
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 111 2e-023
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 111 2e-023
gb|BP597521.1|BP597521 BP597521 RAFL15 Arabidopsis thaliana... 83 4e-023
gb|AV814104.1|AV814104 AV814104 RAFL9 Arabidopsis thaliana ... 110 5e-023
gb|AV548209.1|AV548209 AV548209 Arabidopsis thaliana roots ... 110 5e-023
gb|BP619465.1|BP619465 BP619465 RAFL16 Arabidopsis thaliana... 107 3e-022
gb|AY075622.1| Arabidopsis thaliana At1g51680/F19C24_11 mRN... 106 8e-022
gb|AY133582.1| Arabidopsis thaliana At1g51680/F19C24_11 mRN... 106 8e-022
ref|NM_179462.1| Arabidopsis thaliana 4CL1 (4-COUMARATE:COA... 106 8e-022
gb|AV439568.1|AV439568 AV439568 Arabidopsis thaliana above-... 105 2e-021
gb|AV518010.1|AV518010 AV518010 Arabidopsis thaliana aboveg... 105 2e-021
gb|AV538726.1|AV538726 AV538726 Arabidopsis thaliana roots ... 105 2e-021
gb|AV550302.1|AV550302 AV550302 Arabidopsis thaliana roots ... 105 2e-021
gb|BP785335.1|BP785335 BP785335 RAFL7 Arabidopsis thaliana ... 105 2e-021
gb|AY062759.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 105 2e-021
emb|AX458785.1| Sequence 25 from Patent WO0209295 105 2e-021
gb|AY050824.1| Arabidopsis thaliana putative 4-coumarate-Co... 105 2e-021
gb|AY117254.1| Arabidopsis thaliana putative 4-coumarate-Co... 105 2e-021
gb|BT003376.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 105 2e-021
gb|AY088127.1| Arabidopsis thaliana clone 41541 mRNA, compl... 105 2e-021
gb|AF503762.1| Arabidopsis thaliana adenosine monophosphate... 105 2e-021
emb|BX822629.1|CNS0A76J Arabidopsis thaliana Full-length cD... 105 2e-021
ref|NM_114758.2| Arabidopsis thaliana AMP binding / catalyt... 105 2e-021
gb|BP596151.1|BP596151 BP596151 RAFL15 Arabidopsis thaliana... 57 3e-021
>gb|AY250835.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At5g63380)
mRNA, complete cds
Length = 1689
Score = 269 bits (582), Expect = 6e-071
Identities = 110/152 (72%), Positives = 131/152 (86%)
Frame = +3 / +1
Query: 78 MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 257
+I GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQVPP ELE
Sbjct: 1234 VIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELE 1413
Query: 258 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 437
IL+S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQVAPYKKVRRV
Sbjct: 1414 QILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVAPYKKVRRV 1593
Query: 438 AFVSAIPKSPAGKILRRELVEQAVSMGTSKL* 533
AF++AIPK+PAGKILRREL + AV SKL*
Sbjct: 1594 AFINAIPKNPAGKILRRELTKIAVDGNASKL* 1689
Score = 141 bits (302), Expect = 3e-032
Identities = 71/130 (54%), Positives = 79/130 (60%)
Frame = -1 / -2
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 353
QS + TA SSRR+I PAG GIA KATR TFL GATCLATKSM C S+R PGF
Sbjct: 1688 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGATCLATKSMICASLRLLPGF 1509
Query: 352 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 173
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1508 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1329
Query: 172 LK*XXXPVFN 143
K* PVFN
Sbjct: 1328 SK*QRSPVFN 1299
Score = 121 bits (259), Expect = 2e-026
Identities = 57/140 (40%), Positives = 83/140 (59%)
Frame = -3 / -1
Query: 509 HGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 330
H KLP Q+L SR F DC K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1665 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1486
Query: 329 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVAXXTG 150
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ T
Sbjct: 1485 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1306
Query: 149 FQPAF*IHCCCSSLVVTDIT 90
P F ++C + +V+ IT
Sbjct: 1305 L*PPFFVYCLRTRFLVSHIT 1246
>gb|AV520672.1|AV520672 AV520672 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ28d01F 3', mRNA
sequence
Length = 596
Score = 268 bits (580), Expect = 1e-070
Identities = 109/157 (69%), Positives = 132/157 (84%)
Frame = +3 / -3
Query: 78 MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 257
+I GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQVPP ELE
Sbjct: 594 VIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELE 415
Query: 258 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 437
IL+S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRV
Sbjct: 414 QILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRV 235
Query: 438 AFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFI 548
AF++AIPK+PAGKILRREL + AV SKL* + +
Sbjct: 234 AFINAIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 124
Score = 139 bits (298), Expect = 1e-031
Identities = 70/130 (53%), Positives = 78/130 (60%)
Frame = -1 / +2
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 353
QS + TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 140 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 319
Query: 352 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 173
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 320 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 499
Query: 172 LK*XXXPVFN 143
K* PVFN
Sbjct: 500 SK*QRSPVFN 529
Score = 121 bits (259), Expect = 2e-026
Identities = 57/140 (40%), Positives = 83/140 (59%)
Frame = -3 / +1
Query: 509 HGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 330
H KLP Q+L SR F DC K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 163 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 342
Query: 329 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVAXXTG 150
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ T
Sbjct: 343 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 522
Query: 149 FQPAF*IHCCCSSLVVTDIT 90
P F ++C + +V+ IT
Sbjct: 523 L*PPFFVYCLRTRFLVSHIT 582
>gb|AY136459.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At5g63380)
mRNA, complete cds
Length = 1895
Score = 268 bits (580), Expect = 1e-070
Identities = 109/157 (69%), Positives = 132/157 (84%)
Frame = +3 / +2
Query: 78 MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 257
+I GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQVPP ELE
Sbjct: 1271 VIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELE 1450
Query: 258 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 437
IL+S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRV
Sbjct: 1451 QILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRV 1630
Query: 438 AFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFI 548
AF++AIPK+PAGKILRREL + AV SKL* + +
Sbjct: 1631 AFINAIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 1741
Score = 139 bits (298), Expect = 1e-031
Identities = 70/130 (53%), Positives = 78/130 (60%)
Frame = -1 / -3
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 353
QS + TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1725 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1546
Query: 352 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 173
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1545 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1366
Query: 172 LK*XXXPVFN 143
K* PVFN
Sbjct: 1365 SK*QRSPVFN 1336
Score = 121 bits (259), Expect = 2e-026
Identities = 57/140 (40%), Positives = 83/140 (59%)
Frame = -3 / -2
Query: 509 HGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 330
H KLP Q+L SR F DC K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1702 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1523
Query: 329 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVAXXTG 150
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ T
Sbjct: 1522 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1343
Query: 149 FQPAF*IHCCCSSLVVTDIT 90
P F ++C + +V+ IT
Sbjct: 1342 L*PPFFVYCLRTRFLVSHIT 1283
>emb|BX832101.1|CNS0A10J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH51ZE03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1833
Score = 268 bits (580), Expect = 1e-070
Identities = 109/157 (69%), Positives = 132/157 (84%)
Frame = +3 / +1
Query: 78 MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 257
+I GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQVPP ELE
Sbjct: 1267 VIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELE 1446
Query: 258 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 437
IL+S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRV
Sbjct: 1447 QILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRV 1626
Query: 438 AFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFI 548
AF++AIPK+PAGKILRREL + AV SKL* + +
Sbjct: 1627 AFINAIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 1737
Score = 139 bits (298), Expect = 1e-031
Identities = 70/130 (53%), Positives = 78/130 (60%)
Frame = -1 / -2
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 353
QS + TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1721 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1542
Query: 352 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 173
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1541 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1362
Query: 172 LK*XXXPVFN 143
K* PVFN
Sbjct: 1361 SK*QRSPVFN 1332
Score = 121 bits (259), Expect = 2e-026
Identities = 57/140 (40%), Positives = 83/140 (59%)
Frame = -3 / -1
Query: 509 HGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 330
H KLP Q+L SR F DC K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1698 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1519
Query: 329 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVAXXTG 150
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ T
Sbjct: 1518 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1339
Query: 149 FQPAF*IHCCCSSLVVTDIT 90
P F ++C + +V+ IT
Sbjct: 1338 L*PPFFVYCLRTRFLVSHIT 1279
>ref|NM_125733.2| Arabidopsis thaliana 4-coumarate-CoA ligase/ fatty-acyl-CoA synthase
AT5G63380 mRNA, complete cds
Length = 1896
Score = 268 bits (580), Expect = 1e-070
Identities = 109/157 (69%), Positives = 132/157 (84%)
Frame = +3 / +2
Query: 78 MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 257
+I GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQVPP ELE
Sbjct: 1271 VIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELE 1450
Query: 258 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 437
IL+S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRV
Sbjct: 1451 QILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRV 1630
Query: 438 AFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFI 548
AF++AIPK+PAGKILRREL + AV SKL* + +
Sbjct: 1631 AFINAIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 1741
Score = 139 bits (298), Expect = 1e-031
Identities = 70/130 (53%), Positives = 78/130 (60%)
Frame = -1 / -1
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 353
QS + TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1725 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1546
Query: 352 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 173
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1545 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1366
Query: 172 LK*XXXPVFN 143
K* PVFN
Sbjct: 1365 SK*QRSPVFN 1336
Score = 121 bits (259), Expect = 2e-026
Identities = 57/140 (40%), Positives = 83/140 (59%)
Frame = -3 / -3
Query: 509 HGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 330
H KLP Q+L SR F DC K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1702 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1523
Query: 329 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVAXXTG 150
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ T
Sbjct: 1522 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1343
Query: 149 FQPAF*IHCCCSSLVVTDIT 90
P F ++C + +V+ IT
Sbjct: 1342 L*PPFFVYCLRTRFLVSHIT 1283
>gb|BT010394.1| Arabidopsis thaliana At5g63380 mRNA, complete cds
Length = 1689
Score = 267 bits (578), Expect = 2e-070
Identities = 109/152 (71%), Positives = 130/152 (85%)
Frame = +3 / +1
Query: 78 MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 257
+I GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQVPP ELE
Sbjct: 1234 VIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELE 1413
Query: 258 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 437
IL+S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRV
Sbjct: 1414 QILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRV 1593
Query: 438 AFVSAIPKSPAGKILRRELVEQAVSMGTSKL* 533
AF++AIPK+PAGKILRREL + AV SKL*
Sbjct: 1594 AFINAIPKNPAGKILRRELTKIAVDGNASKL* 1689
Score = 139 bits (298), Expect = 1e-031
Identities = 70/130 (53%), Positives = 78/130 (60%)
Frame = -1 / -2
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 353
QS + TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1688 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1509
Query: 352 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 173
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1508 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1329
Query: 172 LK*XXXPVFN 143
K* PVFN
Sbjct: 1328 SK*QRSPVFN 1299
Score = 121 bits (259), Expect = 2e-026
Identities = 57/140 (40%), Positives = 83/140 (59%)
Frame = -3 / -1
Query: 509 HGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 330
H KLP Q+L SR F DC K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1665 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1486
Query: 329 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVAXXTG 150
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ T
Sbjct: 1485 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1306
Query: 149 FQPAF*IHCCCSSLVVTDIT 90
P F ++C + +V+ IT
Sbjct: 1305 L*PPFFVYCLRTRFLVSHIT 1246
>gb|AY376731.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 4 mRNA, complete
cds
Length = 1689
Score = 267 bits (578), Expect = 2e-070
Identities = 109/152 (71%), Positives = 130/152 (85%)
Frame = +3 / +1
Query: 78 MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 257
+I GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQVPP ELE
Sbjct: 1234 VIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELE 1413
Query: 258 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 437
IL+S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRV
Sbjct: 1414 QILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRV 1593
Query: 438 AFVSAIPKSPAGKILRRELVEQAVSMGTSKL* 533
AF++AIPK+PAGKILRREL + AV SKL*
Sbjct: 1594 AFINAIPKNPAGKILRRELTKIAVDGNASKL* 1689
Score = 139 bits (298), Expect = 1e-031
Identities = 70/130 (53%), Positives = 78/130 (60%)
Frame = -1 / -2
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 353
QS + TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1688 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1509
Query: 352 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 173
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1508 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1329
Query: 172 LK*XXXPVFN 143
K* PVFN
Sbjct: 1328 SK*QRSPVFN 1299
Score = 121 bits (259), Expect = 2e-026
Identities = 57/140 (40%), Positives = 83/140 (59%)
Frame = -3 / -1
Query: 509 HGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 330
H KLP Q+L SR F DC K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1665 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1486
Query: 329 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVAXXTG 150
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ T
Sbjct: 1485 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1306
Query: 149 FQPAF*IHCCCSSLVVTDIT 90
P F ++C + +V+ IT
Sbjct: 1305 L*PPFFVYCLRTRFLVSHIT 1246
>gb|AV556332.1|AV556332 AV556332 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ040c12F 3', mRNA sequence
Length = 593
Score = 264 bits (571), Expect = 2e-069
Identities = 107/153 (69%), Positives = 130/153 (84%)
Frame = +3 / -1
Query: 90 GYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 269
GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQVPP +LE IL+
Sbjct: 593 GYVGNEKASAKTVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVKLEQILH 414
Query: 270 SHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVS 449
S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRVAF++
Sbjct: 413 SNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFIN 234
Query: 450 AIPKSPAGKILRRELVEQAVSMGTSKL*SLKFI 548
AIPK+PAGKILRREL + AV SKL* + +
Sbjct: 233 AIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 135
Score = 136 bits (292), Expect = 6e-031
Identities = 69/130 (53%), Positives = 77/130 (59%)
Frame = -1 / +1
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 353
QS + TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 151 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 330
Query: 352 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 173
LT+KAIG P G E RICS+ GGT* LY I+SF+RST+ S
Sbjct: 331 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNFTGGT**ALYLISSFSRSTIYRKSSE 510
Query: 172 LK*XXXPVFN 143
K* PVFN
Sbjct: 511 SK*QRSPVFN 540
Score = 120 bits (257), Expect = 4e-026
Identities = 57/140 (40%), Positives = 82/140 (58%)
Frame = -3 / +3
Query: 509 HGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 330
H KLP Q+L SR F DC K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 174 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 353
Query: 329 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVAXXTG 150
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ T
Sbjct: 354 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 533
Query: 149 FQPAF*IHCCCSSLVVTDIT 90
P F ++C + V+ IT
Sbjct: 534 L*PPFFVYCLRTRFFVSHIT 593
>gb|BX836241.1|BX836241 BX836241 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH38ZD02 3PRIM,
mRNA sequence
Length = 877
Score = 240 bits (518), Expect = 4e-062
Identities = 92/144 (63%), Positives = 125/144 (86%)
Frame = +3 / -1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 592 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 413
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VA
Sbjct: 412 LLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVA 233
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FVS+IPK+P+GKILR++L++ A S
Sbjct: 232 FVSSIPKNPSGKILRKDLIKIATS 161
Score = 105 bits (225), Expect = 1e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / +3
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 159 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 338
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 339 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 518
Query: 154 PVFN 143
PV N
Sbjct: 519 PVLN 530
>gb|AF360250.1| Arabidopsis thaliana unknown protein (At1g20510) mRNA, complete cds
Length = 1856
Score = 240 bits (518), Expect = 4e-062
Identities = 92/144 (63%), Positives = 125/144 (86%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 1208 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 1387
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VA
Sbjct: 1388 LLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVA 1567
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FVS+IPK+P+GKILR++L++ A S
Sbjct: 1568 FVSSIPKNPSGKILRKDLIKIATS 1639
Score = 105 bits (225), Expect = 1e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / -3
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1641 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1462
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 1461 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1282
Query: 154 PVFN 143
PV N
Sbjct: 1281 PVLN 1270
>gb|AY040047.1| Arabidopsis thaliana unknown protein (At1g20510) mRNA, complete cds
Length = 1641
Score = 240 bits (518), Expect = 4e-062
Identities = 92/144 (63%), Positives = 125/144 (86%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 1195 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 1374
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VA
Sbjct: 1375 LLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVA 1554
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FVS+IPK+P+GKILR++L++ A S
Sbjct: 1555 FVSSIPKNPSGKILRKDLIKIATS 1626
Score = 105 bits (225), Expect = 1e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / -2
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1628 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1449
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 1448 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1269
Query: 154 PVFN 143
PV N
Sbjct: 1268 PVLN 1257
>gb|AY250838.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At1g20510)
mRNA, complete cds
Length = 1641
Score = 240 bits (518), Expect = 4e-062
Identities = 92/144 (63%), Positives = 125/144 (86%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 1195 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 1374
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VA
Sbjct: 1375 LLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVA 1554
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FVS+IPK+P+GKILR++L++ A S
Sbjct: 1555 FVSSIPKNPSGKILRKDLIKIATS 1626
Score = 105 bits (225), Expect = 1e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / -2
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1628 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1449
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 1448 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1269
Query: 154 PVFN 143
PV N
Sbjct: 1268 PVLN 1257
>emb|BX814596.1|CNS0ADI2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB83ZF04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1832
Score = 240 bits (518), Expect = 4e-062
Identities = 92/144 (63%), Positives = 125/144 (86%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 1220 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 1399
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VA
Sbjct: 1400 LLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVA 1579
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FVS+IPK+P+GKILR++L++ A S
Sbjct: 1580 FVSSIPKNPSGKILRKDLIKIATS 1651
Score = 105 bits (225), Expect = 1e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / -3
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1653 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1474
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 1473 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1294
Query: 154 PVFN 143
PV N
Sbjct: 1293 PVLN 1282
>ref|NM_101901.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT1G20510 transcript
variant AT1G20510.1 mRNA, complete cds
Length = 1856
Score = 240 bits (518), Expect = 4e-062
Identities = 92/144 (63%), Positives = 125/144 (86%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 1220 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 1399
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VA
Sbjct: 1400 LLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVA 1579
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FVS+IPK+P+GKILR++L++ A S
Sbjct: 1580 FVSSIPKNPSGKILRKDLIKIATS 1651
Score = 105 bits (225), Expect = 1e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / -3
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1653 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1474
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 1473 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1294
Query: 154 PVFN 143
PV N
Sbjct: 1293 PVLN 1282
>emb|BX814621.1|CNS0ADOY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB85ZA10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1825
Score = 237 bits (513), Expect = 2e-061
Identities = 92/144 (63%), Positives = 124/144 (86%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 1185 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 1364
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VA
Sbjct: 1365 LLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVA 1544
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FVS IPK+P+GKILR++L++ A S
Sbjct: 1545 FVS*IPKNPSGKILRKDLIKIATS 1616
Score = 104 bits (222), Expect = 3e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / -1
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1618 LEVAILMRSLRRILPEGFFGI*DTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1439
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 1438 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1259
Query: 154 PVFN 143
PV N
Sbjct: 1258 PVLN 1247
>emb|BX814850.1|CNS0ACYK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS11ZB06 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 624
Score = 235 bits (508), Expect = 1e-060
Identities = 90/140 (64%), Positives = 123/140 (87%)
Frame = +3 / +1
Query: 93 YVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNS 272
Y ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE +L +
Sbjct: 1 YFSNEEATSSTLDSEGWLRTGGLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLT 180
Query: 273 HPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSA 452
HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+
Sbjct: 181 HPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSS 360
Query: 453 IPKSPAGKILRRELVEQAVS 512
IPK+P+GKILR++L++ A S
Sbjct: 361 IPKNPSGKILRKDLIKIATS 420
Score = 105 bits (223), Expect = 2e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / -2
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 422 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 243
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 242 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRP 63
Query: 154 PVFN 143
PV N
Sbjct: 62 PVLN 51
>gb|AY091079.1| Arabidopsis thaliana putative 4-coumarate--CoA ligase (At4g05160)
mRNA, complete cds
Length = 1788
Score = 234 bits (505), Expect = 3e-060
Identities = 90/144 (62%), Positives = 118/144 (81%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT T+D + W+ TG YFNEDG LY+VDR+KELIKYKG+QV PAELE
Sbjct: 1237 MMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEG 1416
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHPDI+DA VIP+PDE+AG++P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+
Sbjct: 1417 LLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVS 1596
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
F+S +PKS AGKILRRELV+Q S
Sbjct: 1597 FISLVPKSAAGKILRRELVQQVRS 1668
>gb|AY122950.1| Arabidopsis thaliana putative 4-coumarate--CoA ligase (At4g05160)
mRNA, complete cds
Length = 1666
Score = 234 bits (505), Expect = 3e-060
Identities = 90/144 (62%), Positives = 118/144 (81%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT T+D + W+ TG YFNEDG LY+VDR+KELIKYKG+QV PAELE
Sbjct: 1195 MMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEG 1374
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHPDI+DA VIP+PDE+AG++P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+
Sbjct: 1375 LLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVS 1554
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
F+S +PKS AGKILRRELV+Q S
Sbjct: 1555 FISLVPKSAAGKILRRELVQQVRS 1626
>gb|AY250839.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At4g05160)
mRNA, complete cds
Length = 1635
Score = 234 bits (505), Expect = 3e-060
Identities = 90/144 (62%), Positives = 118/144 (81%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT T+D + W+ TG YFNEDG LY+VDR+KELIKYKG+QV PAELE
Sbjct: 1195 MMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEG 1374
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHPDI+DA VIP+PDE+AG++P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+
Sbjct: 1375 LLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVS 1554
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
F+S +PKS AGKILRRELV+Q S
Sbjct: 1555 FISLVPKSAAGKILRRELVQQVRS 1626
>ref|NM_116755.4| Arabidopsis thaliana 4-coumarate-CoA ligase/ fatty-acyl-CoA synthase
AT4G05160 mRNA, complete cds
Length = 1861
Score = 234 bits (505), Expect = 3e-060
Identities = 90/144 (62%), Positives = 118/144 (81%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT T+D + W+ TG YFNEDG LY+VDR+KELIKYKG+QV PAELE
Sbjct: 1261 MMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEG 1440
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHPDI+DA VIP+PDE+AG++P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+
Sbjct: 1441 LLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVS 1620
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
F+S +PKS AGKILRRELV+Q S
Sbjct: 1621 FISLVPKSAAGKILRRELVQQVRS 1692
>gb|CB074237.1|CB074237 EST00751 Virulent Peronospora parasitica Infected Arabidopsis
Forward-Subtracted Library Arabidopsis thaliana cDNA
clone VPP-AA2 similar to 4-COUMARATE-COA LIGASE, mRNA
sequence
Length = 475
Score = 227 bits (491), Expect = 2e-058
Identities = 88/139 (63%), Positives = 115/139 (82%)
Frame = +3 / -3
Query: 96 VGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSH 275
+ + +AT T+D + W+ TG YFNEDG LY+VDR+KELIKYKG+QV PAELE +L SH
Sbjct: 473 LNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGLLVSH 294
Query: 276 PDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAI 455
PDI+DA VIP+PDE+AG++P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+F+S +
Sbjct: 293 PDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLV 114
Query: 456 PKSPAGKILRRELVEQAVS 512
PKS AGKILRRELV+Q S
Sbjct: 113 PKSAAGKILRRELVQQVRS 57
>gb|BX835589.1|BX835589 BX835589 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS94ZD09 3PRIM, mRNA
sequence
Length = 538
Score = 226 bits (489), Expect = 4e-058
Identities = 87/133 (65%), Positives = 117/133 (87%)
Frame = +3 / -2
Query: 114 TAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDA 293
T++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DA
Sbjct: 537 TSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDA 358
Query: 294 AVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAG 473
AVIP+PD++ GQ PMA++VRK GS+L+E +M+FVAKQVAPYK++R+VAFVS+IPK+P+G
Sbjct: 357 AVIPFPDKEVGQFPMAYVVRKTGSSLSENTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSG 178
Query: 474 KILRRELVEQAVS 512
KILR++L++ A S
Sbjct: 177 KILRKDLIKIATS 139
Score = 105 bits (225), Expect = 1e-021
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = -1 / +2
Query: 514 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 335
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 137 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 316
Query: 334 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*XXX 155
G+CP G* SSSAG T* PLY I+SFNRST NPSS *
Sbjct: 317 GNCPTSLSGNGITAASVISG*VSNRASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 496
Query: 154 PVFN 143
PV N
Sbjct: 497 PVLN 508
>gb|BT005689.1| Arabidopsis thaliana clone U50818 putative 4-coumarate-CoA ligase
(At5g38120) mRNA, complete cds
Length = 1684
Score = 226 bits (487), Expect = 8e-058
Identities = 86/129 (66%), Positives = 113/129 (87%)
Frame = +3 / +1
Query: 126 VDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 305
+ SEGWLKTG Y + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1258 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1437
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 485
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1438 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1617
Query: 486 RELVEQAVS 512
++L++ A+S
Sbjct: 1618 KDLIKFAIS 1644
>gb|AY250832.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At5g38120)
mRNA, complete cds
Length = 1653
Score = 226 bits (487), Expect = 8e-058
Identities = 86/129 (66%), Positives = 113/129 (87%)
Frame = +3 / +1
Query: 126 VDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 305
+ SEGWLKTG Y + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1258 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1437
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 485
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1438 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1617
Query: 486 RELVEQAVS 512
++L++ A+S
Sbjct: 1618 KDLIKFAIS 1644
>gb|AY376735.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 11 mRNA, complete
cds
Length = 1653
Score = 226 bits (487), Expect = 8e-058
Identities = 86/129 (66%), Positives = 113/129 (87%)
Frame = +3 / +1
Query: 126 VDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 305
+ SEGWLKTG Y + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1258 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1437
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 485
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1438 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1617
Query: 486 RELVEQAVS 512
++L++ A+S
Sbjct: 1618 KDLIKFAIS 1644
>dbj|AK118041.1| Arabidopsis thaliana At5g38120 mRNA for putative 4-coumarate--CoA
ligase, complete cds, clone: RAFL19-27-B18
Length = 1774
Score = 226 bits (487), Expect = 8e-058
Identities = 86/129 (66%), Positives = 113/129 (87%)
Frame = +3 / +2
Query: 126 VDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 305
+ SEGWLKTG Y + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1313 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1492
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 485
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1493 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1672
Query: 486 RELVEQAVS 512
++L++ A+S
Sbjct: 1673 KDLIKFAIS 1699
>ref|NM_123172.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT5G38120 mRNA, complete
cds
Length = 1727
Score = 226 bits (487), Expect = 8e-058
Identities = 86/129 (66%), Positives = 113/129 (87%)
Frame = +3 / +3
Query: 126 VDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 305
+ SEGWLKTG Y + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1266 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1445
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 485
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1446 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1625
Query: 486 RELVEQAVS 512
++L++ A+S
Sbjct: 1626 KDLIKFAIS 1652
>ref|NM_101898.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT1G20480 mRNA, complete
cds
Length = 2457
Score = 225 bits (485), Expect = 2e-057
Identities = 91/144 (63%), Positives = 115/144 (79%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY + EATA+T+DSEGWLKTG Y + DG +++VDRLKELIK GYQV PAELE
Sbjct: 1299 VMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEA 1478
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP PD AGQ PMA+IVRK GSNL+E ++M FVAKQV+PYKK+R+V
Sbjct: 1479 LLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVT 1658
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
F+++IPK+P+GKILRREL + S
Sbjct: 1659 FLASIPKNPSGKILRRELTKLTTS 1730
>gb|AY250833.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At1g20480)
mRNA, complete cds
Length = 1698
Score = 223 bits (481), Expect = 5e-057
Identities = 90/144 (62%), Positives = 115/144 (79%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY + EATA+T+DSEGWLKTG Y + DG +++VDRLKELIK GYQV PAELE
Sbjct: 1258 VMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEA 1437
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP PD AGQ P+A+IVRK GSNL+E ++M FVAKQV+PYKK+R+V
Sbjct: 1438 LLLAHPEIADAAVIPIPDMKAGQYPVAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVT 1617
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
F+++IPK+P+GKILRREL + S
Sbjct: 1618 FLASIPKNPSGKILRRELTKLTTS 1689
>ref|NM_202143.1| Arabidopsis thaliana 4-coumarate-CoA ligase AT1G20510 transcript
variant AT1G20510.2 mRNA, complete cds
Length = 1915
Score = 126 bits (270), Expect(2) = 9e-057
Identities = 49/75 (65%), Positives = 62/75 (82%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 1208 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 1387
Query: 261 ILNSHPDIMDAAVIP 305
+L +HP+I DAAVIP
Sbjct: 1388 LLLTHPEITDAAVIP 1432
Score = 116 bits (248), Expect(2) = 9e-057
Identities = 43/69 (62%), Positives = 63/69 (91%)
Frame = +3 / +2
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 485
+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR
Sbjct: 1508 FPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILR 1687
Query: 486 RELVEQAVS 512
++L++ A S
Sbjct: 1688 KDLIKIATS 1714
>emb|BX813596.1|CNS0ADNX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB27ZA10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1850
Score = 126 bits (270), Expect(2) = 9e-057
Identities = 49/75 (65%), Positives = 62/75 (82%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY ++EAT++T+DSEGWL+TG Y +EDG +++VDRLKELIKYKGYQV PAELE
Sbjct: 1187 IMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEA 1366
Query: 261 ILNSHPDIMDAAVIP 305
+L +HP+I DAAVIP
Sbjct: 1367 LLLTHPEITDAAVIP 1411
Score = 116 bits (248), Expect(2) = 9e-057
Identities = 43/69 (62%), Positives = 63/69 (91%)
Frame = +3 / +2
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 485
+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR
Sbjct: 1487 FPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILR 1666
Query: 486 RELVEQAVS 512
++L++ A S
Sbjct: 1667 KDLIKIATS 1693
>dbj|AB023035.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9H21
Length = 15319
Score = 90.0 bits (190), Expect(4) = 9e-057
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +3 / -2
Query: 75 *MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQV 239
*++ +GYVG+++A+A TVD EGWLKTG YF+ + LYIVDRLKELIKYK YQV
Sbjct: 15264 *LMGTGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQV 15100
Score = 73.9 bits (155), Expect(4) = 9e-057
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +3 / -1
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV
Sbjct: 14887 FPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQV 14783
Score = 71.2 bits (149), Expect(4) = 9e-057
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3 / -2
Query: 408 VAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFI 548
V PYKKVRRVAF++AIPK+PAGKILRREL + AV SKL* + +
Sbjct: 14679 VTPYKKVRRVAFINAIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 14539
Score = 51.9 bits (107), Expect(4) = 7e-021
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -1 / +3
Query: 409 TCLATKSMTCCSVRFDPGFLTIKAIGSCP 323
TCLATKSM C S+R PGFLT+KAIG P
Sbjct: 14784 TCLATKSMICASLRLLPGFLTMKAIGISP 14870
Score = 48.3 bits (99), Expect(4) = 7e-021
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = -1 / +2
Query: 532 QSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GAT 407
QS + TA SSRR+I PAG GIA KATR TFL G T
Sbjct: 14555 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVT 14680
Score = 44.6 bits (91), Expect(4) = 9e-057
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3 / -3
Query: 237 VPPAELEHILNSHPDIMDAAVIP 305
VPP ELE IL+S+PD++DAAV+P
Sbjct: 15029 VPPVELEQILHSNPDVIDAAVVP 14961
Score = 33.1 bits (66), Expect(4) = 7e-021
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1 / +2
Query: 238 T*YPLYFINSFNRSTM*SNPSSLK*XXXPVFN 143
T* LY I+SF+RST+ S K* PVFN
Sbjct: 15101 T**ALYLISSFSRSTIYRKSSESK*QRSPVFN 15196
Score = 23.5 bits (45), Expect(4) = 7e-021
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 271 EFRICSSSAGGT 236
E RICS+S GGT
Sbjct: 14995 E*RICSNSTGGT 15030
>emb|BX815999.1|CNS0ADB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH22ZA02 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1778
Score = 204 bits (439), Expect(2) = 8e-056
Identities = 78/122 (63%), Positives = 105/122 (86%)
Frame = +3 / +1
Query: 147 KTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAG 326
KTG Y +EDG L++VDRLKELIKYKGYQVPPAELE +L +HP I+DAAVIP+PD +AG
Sbjct: 1318 KTGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLIAHPHILDAAVIPFPDREAG 1497
Query: 327 QLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQA 506
Q PMA++ RKP SNL+E++V+DF++ QVAPYKK+R+VAF+S+IPK+ +GK LR++L++ +
Sbjct: 1498 QYPMAYVARKPESNLSEKEVIDFISNQVAPYKKIRKVAFISSIPKTASGKTLRKDLIKLS 1677
Query: 507 VS 512
S
Sbjct: 1678 TS 1683
Score = 35.9 bits (72), Expect(2) = 8e-056
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLK 149
I GY G++EAT T++ EGWLK
Sbjct: 1253 ISKGYFGNEEATNETINLEGWLK 1321
>emb|BX814177.1|CNS0ADT8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB5ZF11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1851
Score = 202 bits (436), Expect(2) = 3e-052
Identities = 81/128 (63%), Positives = 103/128 (80%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY + EATA+T+DSEGWLKTG Y + DG +++VDRLKELIK GYQV PAELE
Sbjct: 1296 VMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEA 1475
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP PD AGQ PMA+IVRK GSNL+E ++M FVAKQV+PYKK+R+V
Sbjct: 1476 LLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVT 1655
Query: 441 FVSAIPKS 464
F+++IPK+
Sbjct: 1656 FLASIPKN 1679
Score = 25.4 bits (49), Expect(2) = 3e-052
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 456 PKSPAGKILRRELVEQAVS 512
P+ +GKILRREL + S
Sbjct: 1670 PQKSSGKILRRELTKLTTS 1726
>emb|BX816812.1|CNS0AD1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH6ZA12 of Hormone Treated Callus of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1811
Score = 201 bits (433), Expect(2) = 7e-052
Identities = 80/128 (62%), Positives = 104/128 (81%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ G++ + EATA+T+DSEGWLKTG Y + DG +++VDRLKELIK GYQV PAELE
Sbjct: 1299 VMKGHLKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEA 1478
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAVIP PD AGQ PMA+IVRK GSNL+E ++M FVAKQV+PYKK+R+V
Sbjct: 1479 LLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVT 1658
Query: 441 FVSAIPKS 464
F+++IPK+
Sbjct: 1659 FLASIPKN 1682
Score = 25.4 bits (49), Expect(2) = 7e-052
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 456 PKSPAGKILRRELVEQAVS 512
P+ +GKILRREL + S
Sbjct: 1673 PQKSSGKILRRELTKLTTS 1729
>gb|AF106088.1|AF106088 Arabidopsis thaliana 4-coumarate:CoA ligase 3 mRNA, complete cds
Length = 1873
Score = 198 bits (426), Expect = 2e-049
Identities = 79/138 (57%), Positives = 109/138 (78%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I Y+ D EAT+AT+D EGWL TG Y +ED ++IVDRLKE+IK+KG+QVPPAELE
Sbjct: 1293 IMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELES 1472
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +H I DAAV+P DE AG++P+AF+VR G+++TE+ V ++VAKQV YK++ +V
Sbjct: 1473 LLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVF 1652
Query: 441 FVSAIPKSPAGKILRREL 494
FV++IPKSP+GKILR++L
Sbjct: 1653 FVASIPKSPSGKILRKDL 1706
>gb|AY058083.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA, complete cds
Length = 892
Score = 198 bits (426), Expect = 2e-049
Identities = 79/138 (57%), Positives = 109/138 (78%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I Y+ D EAT+AT+D EGWL TG Y +ED ++IVDRLKE+IK+KG+QVPPAELE
Sbjct: 406 IMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELES 585
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +H I DAAV+P DE AG++P+AF+VR G+++TE+ V ++VAKQV YK++ +V
Sbjct: 586 LLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVF 765
Query: 441 FVSAIPKSPAGKILRREL 494
FV++IPKSP+GKILR++L
Sbjct: 766 FVASIPKSPSGKILRKDL 819
>gb|AY090306.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA, complete cds
Length = 612
Score = 198 bits (426), Expect = 2e-049
Identities = 79/138 (57%), Positives = 109/138 (78%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I Y+ D EAT+AT+D EGWL TG Y +ED ++IVDRLKE+IK+KG+QVPPAELE
Sbjct: 181 IMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELES 360
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +H I DAAV+P DE AG++P+AF+VR G+++TE+ V ++VAKQV YK++ +V
Sbjct: 361 LLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVF 540
Query: 441 FVSAIPKSPAGKILRREL 494
FV++IPKSP+GKILR++L
Sbjct: 541 FVASIPKSPSGKILRKDL 594
>emb|AX412572.1| Sequence 336 from Patent WO0222675
Length = 1686
Score = 198 bits (426), Expect = 2e-049
Identities = 79/138 (57%), Positives = 109/138 (78%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I Y+ D EAT+AT+D EGWL TG Y +ED ++IVDRLKE+IK+KG+QVPPAELE
Sbjct: 1255 IMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELES 1434
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +H I DAAV+P DE AG++P+AF+VR G+++TE+ V ++VAKQV YK++ +V
Sbjct: 1435 LLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVF 1614
Query: 441 FVSAIPKSPAGKILRREL 494
FV++IPKSP+GKILR++L
Sbjct: 1615 FVASIPKSPSGKILRKDL 1668
>emb|AX506095.1| Sequence 790 from Patent WO0216655
Length = 1686
Score = 198 bits (426), Expect = 2e-049
Identities = 79/138 (57%), Positives = 109/138 (78%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I Y+ D EAT+AT+D EGWL TG Y +ED ++IVDRLKE+IK+KG+QVPPAELE
Sbjct: 1255 IMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELES 1434
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +H I DAAV+P DE AG++P+AF+VR G+++TE+ V ++VAKQV YK++ +V
Sbjct: 1435 LLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVF 1614
Query: 441 FVSAIPKSPAGKILRREL 494
FV++IPKSP+GKILR++L
Sbjct: 1615 FVASIPKSPSGKILRKDL 1668
>gb|AY376730.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 3 mRNA, complete
cds
Length = 1686
Score = 198 bits (426), Expect = 2e-049
Identities = 79/138 (57%), Positives = 109/138 (78%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I Y+ D EAT+AT+D EGWL TG Y +ED ++IVDRLKE+IK+KG+QVPPAELE
Sbjct: 1255 IMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELES 1434
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +H I DAAV+P DE AG++P+AF+VR G+++TE+ V ++VAKQV YK++ +V
Sbjct: 1435 LLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVF 1614
Query: 441 FVSAIPKSPAGKILRREL 494
FV++IPKSP+GKILR++L
Sbjct: 1615 FVASIPKSPSGKILRKDL 1668
>ref|NM_105180.2| Arabidopsis thaliana 4CL3; 4-coumarate-CoA ligase AT1G65060 (4CL3)
transcript variant AT1G65060.1 mRNA, complete cds
Length = 1889
Score = 198 bits (426), Expect = 2e-049
Identities = 79/138 (57%), Positives = 109/138 (78%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I Y+ D EAT+AT+D EGWL TG Y +ED ++IVDRLKE+IK+KG+QVPPAELE
Sbjct: 1300 IMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELES 1479
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +H I DAAV+P DE AG++P+AF+VR G+++TE+ V ++VAKQV YK++ +V
Sbjct: 1480 LLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVF 1659
Query: 441 FVSAIPKSPAGKILRREL 494
FV++IPKSP+GKILR++L
Sbjct: 1660 FVASIPKSPSGKILRKDL 1713
>gb|BX835847.1|BX835847 BX835847 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH42ZC01 3PRIM,
mRNA sequence
Length = 486
Score = 197 bits (424), Expect = 4e-049
Identities = 76/113 (67%), Positives = 102/113 (90%)
Frame = +3 / -2
Query: 174 EDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVR 353
EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP+PD++ GQ PMA++VR
Sbjct: 485 EDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVR 306
Query: 354 KPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVS 512
K GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR++L++ A S
Sbjct: 305 KTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIATS 147
>dbj|AK117362.1| Arabidopsis thaliana At4g19010 mRNA for putative 4-coumarate-CoA
ligase, complete cds, clone: RAFL16-93-E09
Length = 1954
Score = 196 bits (423), Expect = 5e-049
Identities = 78/160 (48%), Positives = 117/160 (73%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT ++ + WL+TG YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE
Sbjct: 1277 VMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEA 1456
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHP I+DAAV P+E+ G++P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V
Sbjct: 1457 VLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVV 1636
Query: 441 FVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFILTSK 560
V++IPKSP GKILR+EL + +S+L* + +K
Sbjct: 1637 MVNSIPKSPTGKILRKELKRILTNSVSSRL*FFLHLFGNK 1756
>ref|NM_118019.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT4G19010 mRNA, complete
cds
Length = 1954
Score = 196 bits (423), Expect = 5e-049
Identities = 78/160 (48%), Positives = 117/160 (73%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT ++ + WL+TG YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE
Sbjct: 1277 VMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEA 1456
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHP I+DAAV P+E+ G++P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V
Sbjct: 1457 VLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVV 1636
Query: 441 FVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFILTSK 560
V++IPKSP GKILR+EL + +S+L* + +K
Sbjct: 1637 MVNSIPKSPTGKILRKELKRILTNSVSSRL*FFLHLFGNK 1756
>gb|BT005912.1| Arabidopsis thaliana At4g19010 gene, complete cds
Length = 1701
Score = 196 bits (422), Expect = 8e-049
Identities = 77/151 (50%), Positives = 114/151 (75%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT ++ + WL+TG YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE
Sbjct: 1249 VMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEA 1428
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHP I+DAAV P+E+ G++P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V
Sbjct: 1429 VLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVV 1608
Query: 441 FVSAIPKSPAGKILRRELVEQAVSMGTSKL* 533
V++IPKSP GKILR+EL + +S+L*
Sbjct: 1609 MVNSIPKSPTGKILRKELKRILTNSVSSRL* 1701
>gb|AY250834.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At4g19010)
mRNA, complete cds
Length = 1701
Score = 196 bits (422), Expect = 8e-049
Identities = 77/151 (50%), Positives = 114/151 (75%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT ++ + WL+TG YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE
Sbjct: 1249 VMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEA 1428
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHP I+DAAV P+E+ G++P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V
Sbjct: 1429 VLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVV 1608
Query: 441 FVSAIPKSPAGKILRRELVEQAVSMGTSKL* 533
V++IPKSP GKILR+EL + +S+L*
Sbjct: 1609 MVNSIPKSPTGKILRKELKRILTNSVSSRL* 1701
>gb|AY376733.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 7 mRNA, complete
cds
Length = 1701
Score = 196 bits (422), Expect = 8e-049
Identities = 77/151 (50%), Positives = 114/151 (75%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT ++ + WL+TG YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE
Sbjct: 1249 VMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEA 1428
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHP I+DAAV P+E+ G++P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V
Sbjct: 1429 VLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVV 1608
Query: 441 FVSAIPKSPAGKILRRELVEQAVSMGTSKL* 533
V++IPKSP GKILR+EL + +S+L*
Sbjct: 1609 MVNSIPKSPTGKILRKELKRILTNSVSSRL* 1701
>emb|CQ803730.1| Sequence 141 from Patent WO2004035798
Length = 1701
Score = 196 bits (422), Expect = 8e-049
Identities = 77/151 (50%), Positives = 114/151 (75%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + +AT ++ + WL+TG YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE
Sbjct: 1249 VMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEA 1428
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHP I+DAAV P+E+ G++P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V
Sbjct: 1429 VLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVV 1608
Query: 441 FVSAIPKSPAGKILRRELVEQAVSMGTSKL* 533
V++IPKSP GKILR+EL + +S+L*
Sbjct: 1609 MVNSIPKSPTGKILRKELKRILTNSVSSRL* 1701
>gb|AI997382.1|AI997382 701553708 A. thaliana, Columbia Col-0, root-2 Arabidopsis thaliana
cDNA clone 701553708, mRNA sequence
Length = 577
Score = 195 bits (421), Expect = 1e-048
Identities = 78/160 (48%), Positives = 116/160 (72%)
Frame = +3 / -3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ +AT ++ + WL+TG YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE
Sbjct: 539 VMKGYLNTPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEA 360
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHP I+DAAV P+E+ G++P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V
Sbjct: 359 VLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVV 180
Query: 441 FVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFILTSK 560
V++IPKSP GKILR+EL + +S+L* + +K
Sbjct: 179 MVNSIPKSPTGKILRKELKRILTNSVSSRL*FFLHLFGNK 60
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,421,530,902
Number of Sequences: 1013581
Number of extensions: 18832315
Number of successful extensions: 127492
Number of sequences better than 1.0e-020: 176
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 45304434736
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)