TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.8
(708 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY143800.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 125 2e-034
gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R0... 125 4e-034
gb|BP560607.2|BP560607 BP560607 RAFL4 Arabidopsis thaliana ... 125 4e-034
ref|NM_127873.3| Arabidopsis thaliana unknown protein AT2G2... 125 4e-034
gb|AY085311.1| Arabidopsis thaliana clone 14468 mRNA, compl... 125 4e-034
gb|BE038151.1|BE038151 AA09E09 AA Arabidopsis thaliana cDNA... 125 4e-034
emb|BX821290.1|CNS0A98Y Arabidopsis thaliana Full-length cD... 125 4e-034
emb|BX819905.1|CNS0A9GG Arabidopsis thaliana Full-length cD... 125 4e-034
gb|CB263473.1|CB263473 20-E9724-008-016-H06-pBl2 MPIZ-ADIS-... 125 4e-034
gb|AV824639.1|AV824639 AV824639 RAFL6 Arabidopsis thaliana ... 125 4e-034
gb|AY052343.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 125 4e-034
gb|AY056377.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 125 4e-034
gb|BE039244.1|BE039244 AC01A08 AC Arabidopsis thaliana cDNA... 125 4e-034
gb|CD534117.1|CD534117 35L2 Arabidopsis Leaf Senescence Lib... 125 4e-034
gb|BP809885.1|BP809885 BP809885 RAFL16 Arabidopsis thaliana... 125 4e-034
gb|BP813417.1|BP813417 BP813417 RAFL19 Arabidopsis thaliana... 125 4e-034
gb|BP834741.1|BP834741 BP834741 RAFL19 Arabidopsis thaliana... 125 4e-034
emb|BX821559.1|CNS0A96B Arabidopsis thaliana Full-length cD... 123 2e-033
gb|BP614016.1|BP614016 BP614016 RAFL16 Arabidopsis thaliana... 123 2e-033
gb|BP840268.1|BP840268 BP840268 RAFL19 Arabidopsis thaliana... 122 3e-033
gb|BP802211.1|BP802211 BP802211 RAFL14 Arabidopsis thaliana... 122 3e-033
gb|AV788015.1|AV788015 AV788015 RAFL6 Arabidopsis thaliana ... 125 5e-033
gb|AV828766.1|AV828766 AV828766 RAFL9 Arabidopsis thaliana ... 121 7e-033
gb|AV522137.1|AV522137 AV522137 Arabidopsis thaliana aboveg... 120 1e-032
gb|BP602671.1|BP602671 BP602671 RAFL16 Arabidopsis thaliana... 119 4e-032
gb|BP821343.1|BP821343 BP821343 RAFL19 Arabidopsis thaliana... 118 5e-032
gb|BP854157.1|BP854157 BP854157 RAFL21 Arabidopsis thaliana... 118 5e-032
gb|AV802724.1|AV802724 AV802724 RAFL9 Arabidopsis thaliana ... 125 9e-032
gb|BP654917.1|BP654917 BP654917 RAFL19 Arabidopsis thaliana... 125 9e-032
gb|BP591843.1|BP591843 BP591843 RAFL15 Arabidopsis thaliana... 119 1e-031
gb|BP851191.1|BP851191 BP851191 RAFL21 Arabidopsis thaliana... 120 1e-031
gb|BP576809.1|BP576809 BP576809 RAFL14 Arabidopsis thaliana... 125 2e-031
gb|AI999629.1|AI999629 701556759 A. thaliana, Columbia Col-... 115 4e-031
gb|BP832596.1|BP832596 BP832596 RAFL19 Arabidopsis thaliana... 115 4e-031
gb|AV785733.1|AV785733 AV785733 RAFL6 Arabidopsis thaliana ... 125 6e-031
gb|BP583966.1|BP583966 BP583966 RAFL14 Arabidopsis thaliana... 123 8e-031
gb|BP829505.1|BP829505 BP829505 RAFL19 Arabidopsis thaliana... 114 3e-030
gb|BP588279.1|BP588279 BP588279 RAFL15 Arabidopsis thaliana... 125 4e-030
gb|CD531919.1|CD531919 12J01 Arabidopsis Leaf Senescence Li... 125 4e-030
gb|BP591915.1|BP591915 BP591915 RAFL15 Arabidopsis thaliana... 121 5e-030
gb|BP568258.1|BP568258 BP568258 RAFL14 Arabidopsis thaliana... 86 1e-029
gb|T88621.1|T88621 12317 Lambda-PRL2 Arabidopsis thaliana c... 110 1e-029
gb|BP853998.1|BP853998 BP853998 RAFL21 Arabidopsis thaliana... 109 4e-029
gb|BP828254.1|BP828254 BP828254 RAFL19 Arabidopsis thaliana... 97 4e-029
gb|BP589484.1|BP589484 BP589484 RAFL15 Arabidopsis thaliana... 123 7e-029
gb|BP829420.1|BP829420 BP829420 RAFL19 Arabidopsis thaliana... 106 2e-028
gb|BP805505.1|BP805505 BP805505 RAFL16 Arabidopsis thaliana... 108 4e-028
gb|H76367.1|H76367 18072 Lambda-PRL2 Arabidopsis thaliana c... 90 7e-028
gb|AV787104.1|AV787104 AV787104 RAFL6 Arabidopsis thaliana ... 125 1e-027
gb|BP797782.1|BP797782 BP797782 RAFL14 Arabidopsis thaliana... 97 1e-026
gb|BP638604.1|BP638604 BP638604 RAFL19 Arabidopsis thaliana... 122 2e-026
gb|BP835536.1|BP835536 BP835536 RAFL19 Arabidopsis thaliana... 114 3e-026
gb|BP617033.1|BP617033 BP617033 RAFL16 Arabidopsis thaliana... 99 3e-026
emb|BX842072.1|CNS09YAO Arabidopsis thaliana Full-length cD... 85 7e-026
gb|BP602416.1|BP602416 BP602416 RAFL16 Arabidopsis thaliana... 115 9e-026
gb|AV787108.1|AV787108 AV787108 RAFL6 Arabidopsis thaliana ... 118 1e-025
gb|BP847952.1|BP847952 BP847952 RAFL21 Arabidopsis thaliana... 113 8e-025
gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P... 95 5e-024
gb|BP839059.1|BP839059 BP839059 RAFL19 Arabidopsis thaliana... 95 5e-024
gb|BP812336.1|BP812336 BP812336 RAFL19 Arabidopsis thaliana... 92 5e-024
gb|BP651762.1|BP651762 BP651762 RAFL19 Arabidopsis thaliana... 86 5e-024
gb|AI099644.1|AI099644 34370 Lambda-PRL2 Arabidopsis thalia... 112 9e-024
gb|Z17529.1|Z17529 ATTS0103 AC16H Arabidopsis thaliana cDNA... 90 1e-023
gb|F19854.1|F19854 ATTS5893 Ors-B Arabidopsis thaliana cDNA... 112 1e-023
gb|BP592341.1|BP592341 BP592341 RAFL15 Arabidopsis thaliana... 111 2e-023
gb|BP657047.1|BP657047 BP657047 RAFL19 Arabidopsis thaliana... 110 6e-023
gb|BP806898.1|BP806898 BP806898 RAFL16 Arabidopsis thaliana... 101 9e-023
emb|BX821485.1|CNS0A95U Arabidopsis thaliana Full-length cD... 85 6e-022
gb|BP630169.1|BP630169 BP630169 RAFL17 Arabidopsis thaliana... 72 2e-021
gb|BP670205.1|BP670205 BP670205 RAFL21 Arabidopsis thaliana... 105 2e-021
gb|BP579423.1|BP579423 BP579423 RAFL14 Arabidopsis thaliana... 66 3e-021
>gb|AY143800.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 237
Score = 125 bits (268), Expect(2) = 2e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 73 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 237
Score = 41.4 bits (84), Expect(2) = 2e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 1 MGGGNAQKSAMARAKNLEKAKAA 69
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence
Length = 2116
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 189 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 353
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 117 MGGGNAQKSAMARAKNLEKAKAA 185
>gb|BP560607.2|BP560607 BP560607 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-14-I04 5',
mRNA sequence
Length = 680
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 189 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 353
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 117 MGGGNAQKSAMARAKNLEKAKAA 185
>ref|NM_127873.3| Arabidopsis thaliana unknown protein AT2G23090 mRNA, complete cds
Length = 580
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 209 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 373
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 137 MGGGNAQKSAMARAKNLEKAKAA 205
>gb|AY085311.1| Arabidopsis thaliana clone 14468 mRNA, complete sequence
Length = 571
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 208 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 372
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 136 MGGGNAQKSAMARAKNLEKAKAA 204
>gb|BE038151.1|BE038151 AA09E09 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 550
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 160 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 324
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 88 MGGGNAQKSAMARAKNLEKAKAA 156
>emb|BX821290.1|CNS0A98Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL32ZB02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 535
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 198 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 362
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 126 MGGGNAQKSAMARAKNLEKAKAA 194
>emb|BX819905.1|CNS0A9GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS46ZE05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 487
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 116 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 280
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 44 MGGGNAQKSAMARAKNLEKAKAA 112
>gb|CB263473.1|CB263473 20-E9724-008-016-H06-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767H0616Q 5-PRIME, mRNA sequence
Length = 483
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / -2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 359 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 195
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 431 MGGGNAQKSAMARAKNLEKAKAA 363
>gb|AV824639.1|AV824639 AV824639 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-74-C05 5',
mRNA sequence
Length = 481
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 150 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 314
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 78 MGGGNAQKSAMARAKNLEKAKAA 146
>gb|AY052343.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 480
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 149 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 313
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 77 MGGGNAQKSAMARAKNLEKAKAA 145
>gb|AY056377.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 475
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 146 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 310
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 74 MGGGNAQKSAMARAKNLEKAKAA 142
>gb|BE039244.1|BE039244 AC01A08 AC Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 470
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 86 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 250
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 14 MGGGNAQKSAMARAKNLEKAKAA 82
>gb|CD534117.1|CD534117 35L2 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 466
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 98 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 262
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 26 MGGGNAQKSAMARAKNLEKAKAA 94
>gb|BP809885.1|BP809885 BP809885 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-23-L20 5',
mRNA sequence
Length = 399
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 180 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 344
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 108 MGGGNAQKSAMARAKNLEKAKAA 176
>gb|BP813417.1|BP813417 BP813417 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-06-G01 5',
mRNA sequence
Length = 392
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 172 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 336
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 100 MGGGNAQKSAMARAKNLEKAKAA 168
>gb|BP834741.1|BP834741 BP834741 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-11-D24 5',
mRNA sequence
Length = 378
Score = 125 bits (268), Expect(2) = 4e-034
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 144 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 308
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 72 MGGGNAQKSAMARAKNLEKAKAA 140
>emb|BX821559.1|CNS0A96B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL53ZC05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 485
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEA HPK DV CFPHLKK*
Sbjct: 116 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEANHPKADVVACFPHLKK* 280
Score = 41.4 bits (84), Expect(2) = 2e-033
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 44 MGGGNAQKSAMARAKNLEKAKAA 112
>gb|BP614016.1|BP614016 BP614016 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-95-E17 3',
mRNA sequence
Length = 417
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / -1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREH EAKHPK DV CFPHLKK*
Sbjct: 330 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHPEAKHPKADVVACFPHLKK* 166
Score = 41.4 bits (84), Expect(2) = 2e-033
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 402 MGGGNAQKSAMARAKNLEKAKAA 334
>gb|BP840268.1|BP840268 BP840268 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-29-K20 5',
mRNA sequence
Length = 392
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / +1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQ E NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 148 KGSQWEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 312
Score = 41.4 bits (84), Expect(2) = 3e-033
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 76 MGGGNAQKSAMARAKNLEKAKAA 144
>gb|BP802211.1|BP802211 BP802211 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-23-G12 5',
mRNA sequence
Length = 368
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE KKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 144 KGSQLEAKKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 308
Score = 41.4 bits (84), Expect(2) = 3e-033
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 72 MGGGNAQKSAMARAKNLEKAKAA 140
>gb|AV788015.1|AV788015 AV788015 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-77-N07 3',
mRNA sequence
Length = 421
Score = 125 bits (268), Expect(2) = 5e-033
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / -2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 330 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 166
Score = 37.7 bits (76), Expect(2) = 5e-033
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGG N QKS MAR +NLEK K A
Sbjct: 402 MGGRNAQKSAMARAKNLEKAKAA 334
>gb|AV828766.1|AV828766 AV828766 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-32-P22 5',
mRNA sequence
Length = 342
Score = 121 bits (259), Expect(2) = 7e-033
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKH K DV CFPHLKK*
Sbjct: 144 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHXKADVVACFPHLKK* 308
Score = 41.4 bits (84), Expect(2) = 7e-033
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 72 MGGGNAQKSAMARAKNLEKAKAA 140
>gb|AV522137.1|AV522137 AV522137 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ73d03F 3', mRNA
sequence
Length = 464
Score = 120 bits (257), Expect(2) = 1e-032
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / -2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+C T+EVKCREHAEAKHPKTDV CFP LKK*
Sbjct: 352 KGSQLEANKKAMSIQCKVCMQTFICPTSEVKCREHAEAKHPKTDVVACFPPLKK* 188
Score = 41.4 bits (84), Expect(2) = 1e-032
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 424 MGGGNAQKSAMARAKNLEKAKAA 356
>gb|BP602671.1|BP602671 BP602671 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-55-J04 3',
mRNA sequence
Length = 405
Score = 119 bits (254), Expect(2) = 4e-032
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = -2 / -1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKA+SIQCKVCMQTF+CTT+EVK REHAEAKHPK DV CFPHLKK*
Sbjct: 309 KGSQLEANKKAISIQCKVCMQTFICTTSEVKSREHAEAKHPKADVVACFPHLKK* 145
Score = 41.4 bits (84), Expect(2) = 4e-032
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 381 MGGGNAQKSPMARAKNLEKAKAA 313
>gb|BP821343.1|BP821343 BP821343 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-57-K19 5',
mRNA sequence
Length = 395
Score = 118 bits (253), Expect(2) = 5e-032
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = -2 / +1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPH 342
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPH
Sbjct: 106 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPH 258
Score = 41.4 bits (84), Expect(2) = 5e-032
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 34 MGGGNAQKSAMARAKNLEKAKAA 102
>gb|BP854157.1|BP854157 BP854157 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-60-K15 5',
mRNA sequence
Length = 394
Score = 118 bits (253), Expect(2) = 5e-032
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAK+PK DV CFP LKK*
Sbjct: 207 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKNPKADVVACFPQLKK* 371
Score = 41.4 bits (84), Expect(2) = 5e-032
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 135 MGGGNAQKSAMARAKNLEKAKAA 203
>gb|AV802724.1|AV802724 AV802724 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-32-P22 3',
mRNA sequence
Length = 395
Score = 125 bits (268), Expect(2) = 9e-032
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / -3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 330 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 166
Score = 33.6 bits (67), Expect(2) = 9e-032
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -3
Query: 554 GNGQKSKMARERNLEKNKGA 495
GN QKS MAR +NLEK K A
Sbjct: 393 GNAQKSAMARAKNLEKAKAA 334
>gb|BP654917.1|BP654917 BP654917 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-19-E23 3',
mRNA sequence
Length = 393
Score = 125 bits (268), Expect(2) = 9e-032
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / -1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 330 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 166
Score = 33.6 bits (67), Expect(2) = 9e-032
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -1
Query: 554 GNGQKSKMARERNLEKNKGA 495
GN QKS MAR +NLEK K A
Sbjct: 393 GNAQKSAMARPKNLEKAKAA 334
>gb|BP591843.1|BP591843 BP591843 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-D15 3',
mRNA sequence
Length = 439
Score = 119 bits (255), Expect(2) = 1e-031
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = -2 / -1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
K SQLE NKKA+SIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 370 KVSQLEANKKAISIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 206
Score = 39.1 bits (79), Expect(2) = 1e-031
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 560 GGGNGQKSKMARERNLEKNKGA 495
GGGN QKS MAR +NLEK K A
Sbjct: 439 GGGNAQKSAMARAKNLEKAKAA 374
>gb|BP851191.1|BP851191 BP851191 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-15-J06 5',
mRNA sequence
Length = 410
Score = 120 bits (256), Expect(2) = 1e-031
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
K +QLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 210 KVAQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 374
Score = 38.6 bits (78), Expect(2) = 1e-031
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +N EK K A
Sbjct: 137 MGGGNAQKSAMARAKNWEKAKAA 205
>gb|BP576809.1|BP576809 BP576809 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-93-G19 3',
mRNA sequence
Length = 431
Score = 125 bits (268), Expect(2) = 2e-031
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / -1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 368 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 204
Score = 32.2 bits (64), Expect(2) = 2e-031
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / -1
Query: 554 GNGQKSKMARERNLEKNKGA 495
GN QKS MAR +NLEK K +
Sbjct: 431 GNAQKSAMARAKNLEKAKAS 372
>gb|AI999629.1|AI999629 701556759 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556759, mRNA sequence
Length = 462
Score = 115 bits (246), Expect(2) = 4e-031
Identities = 46/55 (83%), Positives = 48/55 (87%)
Frame = -2 / -3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQ KVC QTF+CTT+EVKCREHAEAKHPK DV CFPH KK*
Sbjct: 349 KGSQLEANKKAMSIQXKVCXQTFICTTSEVKCREHAEAKHPKADVVACFPHXKK* 185
Score = 41.4 bits (84), Expect(2) = 4e-031
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 421 MGGGNAQKSAMARAKNLEKAKAA 353
>gb|BP832596.1|BP832596 BP832596 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-93-C11 5',
mRNA sequence
Length = 398
Score = 115 bits (246), Expect(2) = 4e-031
Identities = 47/55 (85%), Positives = 49/55 (89%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKV MQTF+CTT+EVKCREHAEAKHPK DV CF HLKK*
Sbjct: 146 KGSQLEANKKAMSIQCKVGMQTFICTTSEVKCREHAEAKHPKADVVACFLHLKK* 310
Score = 41.4 bits (84), Expect(2) = 4e-031
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 74 MGGGNAQKSAMARAKNLEKAKAA 142
>gb|AV785733.1|AV785733 AV785733 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-D15 3',
mRNA sequence
Length = 405
Score = 125 bits (268), Expect(2) = 6e-031
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / -3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 343 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 179
Score = 30.9 bits (61), Expect(2) = 6e-031
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 551 NGQKSKMARERNLEKNKGA 495
N QKS MAR +NLEK K A
Sbjct: 403 NAQKSAMARAKNLEKAKAA 347
>gb|BP583966.1|BP583966 BP583966 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-E14 3',
mRNA sequence
Length = 429
Score = 123 bits (263), Expect(2) = 8e-031
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / -1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREH EAKHPK DV CFPHLKK*
Sbjct: 366 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHPEAKHPKADVVACFPHLKK* 202
Score = 32.7 bits (65), Expect(2) = 8e-031
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -1
Query: 554 GNGQKSKMARERNLEKNKGA 495
GN QKS MAR +NLEK K A
Sbjct: 429 GNPQKSAMARPKNLEKAKAA 370
>gb|BP829505.1|BP829505 BP829505 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-82-E16 5',
mRNA sequence
Length = 383
Score = 114 bits (244), Expect(2) = 3e-030
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -2 / +2
Query: 500 GAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCF 348
G KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CF
Sbjct: 170 GGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACF 322
Score = 39.6 bits (80), Expect(2) = 3e-030
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNK 501
MGGGN QKS MAR +NLEK K
Sbjct: 104 MGGGNAQKSAMARAKNLEKAK 166
>gb|BP588279.1|BP588279 BP588279 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-45-L11 3',
mRNA sequence
Length = 429
Score = 125 bits (268), Expect(2) = 4e-030
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / -3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 370 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 206
Score = 28.1 bits (55), Expect(2) = 4e-030
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 545 QKSKMARERNLEKNKGA 495
QKS MAR +NLEK K A
Sbjct: 424 QKSAMARAKNLEKAKAA 374
>gb|CD531919.1|CD531919 12J01 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 384
Score = 125 bits (268), Expect(2) = 4e-030
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / +1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 55 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 219
Score = 28.1 bits (55), Expect(2) = 4e-030
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 545 QKSKMARERNLEKNKGA 495
QKS MAR +NLEK K A
Sbjct: 1 QKSAMARAKNLEKAKAA 51
>gb|BP591915.1|BP591915 BP591915 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-H05 3',
mRNA sequence
Length = 439
Score = 121 bits (259), Expect(2) = 5e-030
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / -1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
K SQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 367 KVSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 203
Score = 31.8 bits (63), Expect(2) = 5e-030
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / -1
Query: 560 GGGNGQKSKMARERNLEKNKGA 495
G N QKS MAR +NLEK K A
Sbjct: 436 GWRNAQKSAMARAKNLEKAKAA 371
>gb|BP568258.1|BP568258 BP568258 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-61-G17 3',
mRNA sequence
Length = 437
Score = 85.8 bits (181), Expect(3) = 1e-029
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -2 / -2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHA 387
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHA
Sbjct: 343 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 236
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2 / -1
Query: 386 EAKHPKTDVYQCFPHLKK* 330
EAKHPK DV CFPHLKK*
Sbjct: 236 EAKHPKADVVACFPHLKK* 180
Score = 41.4 bits (84), Expect(3) = 1e-029
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 415 MGGGNAQKSAMARAKNLEKAKAA 347
>gb|T88621.1|T88621 12317 Lambda-PRL2 Arabidopsis thaliana cDNA clone 160G9T7, mRNA
sequence
Length = 409
Score = 110 bits (235), Expect(2) = 1e-029
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK 333
KGSQLE NKKAMSI CKVCMQTF+CTT+EVKCREHAEA K DV CFPHLKK
Sbjct: 119 KGSQLEANKKAMSIXCKVCMQTFICTTSEVKCREHAEAXIRKADVVACFPHLKK 280
Score = 41.4 bits (84), Expect(2) = 1e-029
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 47 MGGGNAQKSAMARXKNLEKAKAA 115
>gb|BP853998.1|BP853998 BP853998 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-60-C07 5',
mRNA sequence
Length = 395
Score = 109 bits (232), Expect(2) = 4e-029
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = -2 / +3
Query: 485 QLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPH 342
Q E NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPH
Sbjct: 156 QWEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPH 299
Score = 41.4 bits (84), Expect(2) = 4e-029
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 76 MGGGNAQKSAMARAKNLEKAKAA 144
>gb|BP828254.1|BP828254 BP828254 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-78-E09 5',
mRNA sequence
Length = 360
Score = 97.3 bits (206), Expect(3) = 4e-029
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -2 / +1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPK 369
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKH K
Sbjct: 145 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHRK 270
Score = 41.4 bits (84), Expect(3) = 4e-029
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 73 MGGGNAQKSAMARAKNLEKAKAA 141
Score = 29.5 bits (58), Expect(3) = 4e-029
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 371 KTDVYQCFPHLKK* 330
K DV CFPHLKK*
Sbjct: 267 KADVVACFPHLKK* 308
>gb|BP589484.1|BP589484 BP589484 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-49-O22 3',
mRNA sequence
Length = 429
Score = 123 bits (263), Expect(2) = 7e-029
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = -2 / -3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEA HPK DV CFPHLKK*
Sbjct: 370 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEANHPKADVVACFPHLKK* 206
Score = 26.3 bits (51), Expect(2) = 7e-029
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 545 QKSKMARERNLEKNK 501
QKS MAR +NLEK K
Sbjct: 424 QKSAMARAKNLEKAK 380
>gb|BP829420.1|BP829420 BP829420 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-82-A10 5',
mRNA sequence
Length = 374
Score = 106 bits (226), Expect(2) = 2e-028
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
K + + +K MSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 146 KVANWKLTRKPMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 310
Score = 41.4 bits (84), Expect(2) = 2e-028
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 73 MGGGNAQKSAMARAKNLEKAKAA 141
>gb|BP805505.1|BP805505 BP805505 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-06-D07 5',
mRNA sequence
Length = 430
Score = 108 bits (230), Expect(2) = 4e-028
Identities = 44/55 (80%), Positives = 47/55 (85%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
K +Q E NKKAMSIQCKV MQTF+CTT+EVKCRE AEAKHPK DV CFPHLKK*
Sbjct: 147 KVAQWEANKKAMSIQCKVRMQTFICTTSEVKCREQAEAKHPKADVVACFPHLKK* 311
Score = 38.6 bits (78), Expect(2) = 4e-028
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +N EK K A
Sbjct: 74 MGGGNAQKSAMARAKNSEKAKAA 142
>gb|H76367.1|H76367 18072 Lambda-PRL2 Arabidopsis thaliana cDNA clone 193I24T7, mRNA
sequence
Length = 458
Score = 90.0 bits (190), Expect(3) = 7e-028
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = -2 / +2
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEA
Sbjct: 122 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 235
Score = 41.4 bits (84), Expect(3) = 7e-028
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK K A
Sbjct: 50 MGGGNAQKSAMARXKNLEKAKAA 118
Score = 32.7 bits (65), Expect(3) = 7e-028
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 380 KHPKTDVYQCFPHLKK* 330
+ PK DV CFPHLKK*
Sbjct: 235 EXPKADVVACFPHLKK* 285
>gb|AV787104.1|AV787104 AV787104 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-74-B18 3',
mRNA sequence
Length = 409
Score = 125 bits (268), Expect = 1e-027
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2 / -1
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK* 330
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKHPK DV CFPHLKK*
Sbjct: 370 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK* 206
>gb|BP797782.1|BP797782 BP797782 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-04-M12 5',
mRNA sequence
Length = 381
Score = 97.3 bits (206), Expect(2) = 1e-026
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -2 / +3
Query: 494 KGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPK 369
KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKCREHAEAKH K
Sbjct: 138 KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHRK 263
Score = 45.1 bits (92), Expect(2) = 1e-026
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 563 MGGGNGQKSKMARERNLEKNKGA 495
MGGGN QKS MAR +NLEK KGA
Sbjct: 66 MGGGNAQKSAMARAKNLEKGKGA 134
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,562,283,643
Number of Sequences: 1013581
Number of extensions: 22152581
Number of successful extensions: 189752
Number of sequences better than 1.0e-020: 79
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 44073335966
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)