TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.723
(715 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for put... 365 e-107
ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G2... 365 e-107
dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhea... 365 e-107
emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGO... 363 e-106
gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO... 375 e-103
ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT... 375 e-103
gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1... 375 e-103
emb|AX505699.1| Sequence 394 from Patent WO0216655 375 e-103
ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G3... 237 1e-095
gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P... 79 9e-095
ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G2... 161 2e-093
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 79 3e-092
gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 79 1e-078
gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis tha... 84 1e-078
emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cD... 294 2e-078
gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11... 84 3e-076
gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14... 63 2e-068
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 84 2e-062
ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G2... 105 5e-059
ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 110 7e-055
ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 110 7e-055
gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein... 110 7e-055
gb|BT000941.1| Arabidopsis thaliana clone C105223 putative ... 110 7e-055
gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence 110 7e-055
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 79 2e-053
ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G4381... 111 2e-053
emb|AX505737.1| Sequence 432 from Patent WO0216655 111 2e-053
emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwil... 111 8e-053
emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cD... 105 5e-052
gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flower... 204 2e-051
emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cD... 110 1e-050
gb|T21581.1|T21581 3589 Lambda-PRL2 Arabidopsis thaliana cD... 154 6e-044
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 106 4e-040
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 93 4e-040
gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis tha... 93 4e-040
gb|CK121100.1|CK121100 204j21.p1 AtM1 Arabidopsis thaliana ... 76 5e-040
ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G3... 88 5e-040
gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana ... 110 1e-037
gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis tha... 69 1e-036
gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed... 102 2e-036
gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC ... 69 2e-036
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 106 3e-036
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 106 4e-036
gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds 106 4e-036
ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1... 106 4e-036
gb|CA781259.1|CA781259 014A08AF Infected Arabidopsis Leaf A... 96 1e-035
gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveg... 150 5e-035
gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS... 111 1e-034
gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveg... 146 6e-034
gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complet... 93 9e-031
dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unk... 93 2e-030
gb|AF154272.1|AF154272 Arabidopsis thaliana PINHEAD (PINHEA... 57 5e-030
ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2)... 93 6e-030
gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2... 62 1e-029
gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K... 62 2e-029
emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cD... 110 8e-028
dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosom... 57 9e-026
gb|CD534067.1|CD534067 35F4 Arabidopsis Leaf Senescence Lib... 76 2e-025
gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveg... 106 1e-023
gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-... 110 5e-023
gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots ... 110 5e-023
gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green ... 110 5e-023
gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green ... 106 6e-022
gb|BZ761910.1|BZ761910 SALK_083022.50.80.x Arabidopsis thal... 79 3e-021
gb|CC794982.1|CC794982 SALK_060402.40.25.x Arabidopsis thal... 71 3e-021
gb|AI993691.1|AI993691 701497176 A. thaliana, Ohio State cl... 75 6e-020
gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Siliqu... 100 9e-020
gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveg... 98 2e-019
gb|BE525238.1|BE525238 M60B11STM Arabidopsis developing see... 88 2e-018
gb|BU635669.1|BU635669 028G09 Infected Arabidopsis Leaf Ara... 85 1e-017
gb|BZ378858.1|BZ378858 SALK_112059.54.15.x Arabidopsis thal... 67 4e-017
gb|BZ661709.1|BZ661709 SALK_025183.55.25.x Arabidopsis thal... 67 4e-017
gb|CL476825.1|CL476825 SAIL_260_A03.v1 SAIL Collection Arab... 57 5e-016
gb|BZ379147.1|BZ379147 SALK_112923.34.65.x Arabidopsis thal... 60 4e-015
gb|BZ378856.1|BZ378856 SALK_112057.47.85.x Arabidopsis thal... 57 3e-014
gb|AV442417.1|AV442417 AV442417 Arabidopsis thaliana above-... 50 3e-012
emb|BX943872.1| Arabidopsis thaliana T-DNA flanking sequenc... 71 5e-011
emb|BX943873.1| Arabidopsis thaliana T-DNA flanking sequenc... 65 3e-009
gb|BH251007.1|BH251007 SALK_010860 Arabidopsis thaliana TDN... 64 4e-009
gb|CC888526.1|CC888526 SALK_151983.56.00.x Arabidopsis thal... 64 4e-009
gb|BE521778.1|BE521778 M21E10STM Arabidopsis developing see... 63 7e-009
gb|CK118552.1|CK118552 216l20.p1 AtM1 Arabidopsis thaliana ... 62 1e-008
emb|BX001385.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 2e-008
gb|AV548172.1|AV548172 AV548172 Arabidopsis thaliana roots ... 62 3e-008
emb|AL935736.1| Arabidopsis thaliana transposon insertion S... 45 3e-008
emb|BX530820.1| Arabidopsis thaliana T-DNA flanking sequenc... 46 7e-008
gb|BE530614.1|BE530614 M78I15STM Arabidopsis developing see... 60 7e-008
gb|N65911.1|N65911 20951 Lambda-PRL2 Arabidopsis thaliana c... 43 2e-007
gb|BH753835.1|BH753835 SALK_029708.54.75.x Arabidopsis thal... 58 2e-007
gb|AV523023.1|AV523023 AV523023 Arabidopsis thaliana aboveg... 57 6e-007
emb|AJ522260.1|ATH522260 Arabidopsis thaliana T-DNA flankin... 50 4e-006
gb|B25866.1|B25866 F28J22TRB IGF Arabidopsis thaliana genom... 50 4e-006
gb|CC180097.1|CC180097 SALK_076199.51.05.x Arabidopsis thal... 54 4e-006
gb|B96649.1|B96649 T30P20TR TAMU Arabidopsis thaliana genom... 36 7e-006
gb|CL495965.1|CL495965 SAIL_618_D07.v1 SAIL Collection Arab... 38 1e-005
gb|AV529891.1|AV529891 AV529891 Arabidopsis thaliana aboveg... 51 3e-005
gb|BH904361.1|BH904361 SALK_104357.53.75.x Arabidopsis thal... 50 7e-005
emb|BX649705.1| Arabidopsis thaliana T-DNA flanking sequenc... 48 3e-004
gb|BH862333.1|BH862333 SALK_089370 Arabidopsis thaliana TDN... 47 5e-004
gb|AV548086.1|AV548086 AV548086 Arabidopsis thaliana roots ... 47 7e-004
emb|BX530819.1| Arabidopsis thaliana T-DNA flanking sequenc... 46 0.001
gb|BE529725.1|BE529725 M75O17STM Arabidopsis developing see... 46 0.001
gb|CC180096.1|CC180096 SALK_076191.19.35.x Arabidopsis thal... 46 0.001
gb|BH617562.1|BH617562 SALK_037270 Arabidopsis thaliana TDN... 45 0.003
gb|CL477094.1|CL477094 SAIL_267b_B06.v1 SAIL Collection Ara... 44 0.005
gb|AY600524.1| Arabidopsis thaliana hypothetical protein (A... 44 0.005
gb|BZ377730.1|BZ377730 SALK_106089.15.00.x Arabidopsis thal... 30 0.012
gb|BZ352470.1|BZ352470 SALK_080531.35.85.x Arabidopsis thal... 41 0.031
emb|BX003672.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 0.058
gb|BZ352471.1|BZ352471 SALK_080533.42.40.x Arabidopsis thal... 40 0.080
emb|CR404250.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 0.080
emb|AJ521659.1|ATH521659 Arabidopsis thaliana T-DNA flankin... 40 0.080
gb|BH813184.1|BH813184 SALK_063806 Arabidopsis thaliana TDN... 39 0.15
emb|BX003671.1| Arabidopsis thaliana T-DNA flanking sequenc... 39 0.21
emb|CR397125.1| Arabidopsis thaliana T-DNA flanking sequenc... 39 0.21
gb|AV532952.1|AV532952 AV532952 Arabidopsis thaliana flower... 39 0.21
gb|AV534003.1|AV534003 AV534003 Arabidopsis thaliana flower... 39 0.21
gb|AV560716.1|AV560716 AV560716 Arabidopsis thaliana green ... 39 0.21
gb|BZ287873.1|BZ287873 SALK_021251.35.70.x Arabidopsis thal... 37 0.54
gb|CL473848.1|CL473848 SAIL_208_A09.v1 SAIL Collection Arab... 35 2.6
gb|BP618364.1|BP618364 BP618364 RAFL16 Arabidopsis thaliana... 35 2.6
gb|BZ354314.1|BZ354314 SALK_123506.30.05.x Arabidopsis thal... 35 3.6
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 35 3.6
emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome... 35 3.6
emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosom... 35 3.6
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 35 3.6
gb|AU227040.1|AU227040 AU227040 RAFL14 Arabidopsis thaliana... 28 4.4
gb|AU235869.1|AU235869 AU235869 RAFL14 Arabidopsis thaliana... 34 5.0
ref|NM_118482.2| Arabidopsis thaliana transmembrane recepto... 34 5.0
gb|CA781129.1|CA781129 002C06AF Infected Arabidopsis Leaf A... 31 6.0
gb|CW843919.1|CW843919 GT10282.Ds3.04.02.2003.jw89.501 Arab... 34 6.8
gb|AY088450.1| Arabidopsis thaliana clone 6760 mRNA, comple... 34 6.8
gb|AC069160.7|AC069160 Arabidopsis thaliana chromosome 1 BA... 34 6.8
dbj|AB025603.1| Arabidopsis thaliana genomic DNA, chromosom... 34 6.8
ref|NM_124595.2| Arabidopsis thaliana lipid binding AT5G521... 34 6.8
emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome... 25 7.1
dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosom... 25 7.3
gb|L05363.1|ATHUBQC Arabidopsis thaliana polyubiquitin (ubq... 25 9.5
>dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative zwille/pinhead,
complete cds, clone: RAFL19-56-B01
Length = 3090
Score = 365 bits (791), Expect(2) = e-107
Identities = 140/188 (74%), Positives = 166/188 (88%)
Frame = +2 / +2
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ RE L+DFY SS
Sbjct: 2105 DIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLDFYYSS 2284
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
RKPEHIIIFRDGVSESQF QV+NIELDQ+++ACKFLD+ W PKFTVIVAQKNHHTKFF
Sbjct: 2285 ENRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFF 2464
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q+ PDNV PGT++DS++CHP+NFDFY+CAHAGMIGTTRPTHYHVL+DEIGF+ D++QE
Sbjct: 2465 QSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQEL 2644
Query: 692 VHSLSYVY 715
VHSLSYVY
Sbjct: 2645 VHSLSYVY 2668
Score = 208 bits (449), Expect(2) = 3e-066
Identities = 111/187 (59%), Positives = 121/187 (64%)
Frame = -2 / -1
Query: 711 T*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
T*D E T+S SS PISS RT * VGLVVPI+PA A *KSK G Q LS VPG T
Sbjct: 2664 T*DRECTSSWRSSVANPISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGT 2485
Query: 531 LSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIM 352
LSG KN VWWFF ATITVN G H SSRNLHA +I*S+S+L T +N* SLTPSLKI+M
Sbjct: 2484 LSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHACII*SNSILRT*LN*DSLTPSLKIMM 2305
Query: 351 CSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
CSGF F EL *K GL IIS L D V T ALY E+ GH ELTT
Sbjct: 2304 CSGFLFSEL**KSNKSSLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTT 2125
Query: 171 AATEGLS 151
AA +G+S
Sbjct: 2124 AAIDGIS 2104
Score = 136 bits (292), Expect(2) = 4e-033
Identities = 62/152 (40%), Positives = 94/152 (61%)
Frame = -1 / -3
Query: 700 RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW* 521
RM+K L +VC + LV+QNM++ PC SNH SM +E++V + + ++ S +NI+
Sbjct: 2653 RMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDLAVNDCSWRNIIRA 2474
Query: 520 CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
RL+EL VVVLL N H +L P +I+KL CL LIQ N+ +L +L +IPENN V WF
Sbjct: 2473 SRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRLAYTIPENNDVLWF 2294
Query: 340 SLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF 245
+ V+V Q FP+ + + + ++ +HF
Sbjct: 2293 PIL*TVVKV*QEFPEHSFVFAIDGFEEIINHF 2198
Score = 90.9 bits (192), Expect(3) = 9e-040
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGGLNSLL +E S ++P V+QVPTII+GMDVSHG PGQ A V
Sbjct: 1952 YLTNVLLKINAKLGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQSDIPSIAAVV 2131
Query: 182 S 184
S
Sbjct: 2132 S 2134
Score = 66.6 bits (139), Expect(3) = 9e-040
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = +1 / +1
Query: 301 GITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDC 480
G RLL + +TR H+YFQGW + SV +* GSD GM VS * V ++V+ D
Sbjct: 2254 GTLVRLLLQFRE*ETRAHHYFQGWCKRVSVQSSS*Y*IGSDDAGMQVS**YVASEVYSDS 2433
Query: 481 CSKEPPHQVL 510
C +EPPH+VL
Sbjct: 2434 CPEEPPHKVL 2463
Score = 66.1 bits (138), Expect(2) = 3e-066
Identities = 29/49 (59%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
PG P +TSIP MMVGTC T GI + S +NEF PPS A IF L RY
Sbjct: 2097 PGEPWDTSIPTMMVGTCVTFGIAGERSIANNEFNPPSLAFIFRRTLVRY 1951
Score = 57.9 bits (120), Expect(4) = 2e-012
Identities = 35/68 (51%), Positives = 38/68 (55%)
Frame = -3 / -2
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP 366
F EEH + + RT CGGS Q S *T T H ET MP SDP Q * *T+ HP
Sbjct: 2498 FLEEHYQGLETGRTLCGGSSGQLSL*TSDATYHQETCMPASSDPIQY*ELD*TETRLHHP 2319
Query: 365 *K*LCVLV 342
*K* C LV
Sbjct: 2318 *K**CALV 2295
Score = 46.9 bits (96), Expect(3) = 9e-040
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1 / +1
Query: 577 ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
+L L + CW DWN KA+ L CS RD RR C+F++L
Sbjct: 2530 QL*FLSLRPCWHDWNYKANTLPCSV*RDWVCHRRPPRTCAFSVL 2661
Score = 46.4 bits (95), Expect(2) = e-107
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1 / +1
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
ED+C+AWW E V + ++ N AS++HH GC W
Sbjct: 1972 EDKCQAWWIEFVVSYGALTSNAKSNASSYHHCWDGCIPW 2088
Score = 41.8 bits (85), Expect(3) = 5e-007
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = +3 / +3
Query: 297 SGNH*STSTLALESENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSG 458
SGN T T NQ+T LFSGM +S + L+WIR RH SF M G
Sbjct: 2250 SGNSC*TFTTVQRIGNQSTSLFSGMV*ASLSSIKFLILNWIR*CRHASFLMIRG 2411
Score = 32.7 bits (65), Expect(4) = 2e-012
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3 / -2
Query: 698 NEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRS 579
N Q RL + SR EH + AL FQS QH R++S
Sbjct: 2651 NAQVLGGRLWQTQSRHTEHGNVLAL*FQSCQHGRRDRNQS 2532
Score = 30.4 bits (60), Expect(3) = 5e-007
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3 / +3
Query: 531 MFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFI 698
MF E + T S ML *LE QG MFC TR QT ++L I
Sbjct: 2484 MFLQEQSLTARSVTHATLISISAPMLA*LELQGQHITMFCMTRLGLPQTTSKNLCI 2651
Score = 27.2 bits (53), Expect(3) = 5e-007
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3 / +3
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMV 140
*R M SLV * RC +Q RK+ PS WM+ MV
Sbjct: 1971 *R*MPSLVD*IRC*LWSAHQQCQK*RKFLPSLLGWMYPMV 2090
Score = 27.2 bits (53), Expect(2) = 4e-033
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3 / -2
Query: 140 DHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQALH*SS 21
+H HP +*W LA + L T+S HQA H SS
Sbjct: 2090 NHGIHPSQQ*W*ELALLLALLVSAP*LTTNSIHQAWHLSS 1971
Score = 23.1 bits (44), Expect(4) = 2e-012
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 58 QRVQTTKLCIDLHQQIKQV 2
QR+Q+TKL I L + I ++
Sbjct: 2008 QRIQSTKLGIYLQENIGEI 1952
Score = 23.1 bits (44), Expect(4) = 2e-012
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 139 TM*NIHT*DDGGYLRHMWY 83
TM IH +DG LR+ W+
Sbjct: 2089 TMGYIHPNNDGRNLRYFWH 2033
>ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G21150 mRNA, complete cds
Length = 3018
Score = 365 bits (791), Expect(2) = e-107
Identities = 140/188 (74%), Positives = 166/188 (88%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ RE L+DFY SS
Sbjct: 2040 DIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLDFYYSS 2219
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
RKPEHIIIFRDGVSESQF QV+NIELDQ+++ACKFLD+ W PKFTVIVAQKNHHTKFF
Sbjct: 2220 ENRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFF 2399
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q+ PDNV PGT++DS++CHP+NFDFY+CAHAGMIGTTRPTHYHVL+DEIGF+ D++QE
Sbjct: 2400 QSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQEL 2579
Query: 692 VHSLSYVY 715
VHSLSYVY
Sbjct: 2580 VHSLSYVY 2603
Score = 208 bits (449), Expect(2) = 3e-066
Identities = 111/187 (59%), Positives = 121/187 (64%)
Frame = -2 / -3
Query: 711 T*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
T*D E T+S SS PISS RT * VGLVVPI+PA A *KSK G Q LS VPG T
Sbjct: 2599 T*DRECTSSWRSSVANPISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGT 2420
Query: 531 LSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIM 352
LSG KN VWWFF ATITVN G H SSRNLHA +I*S+S+L T +N* SLTPSLKI+M
Sbjct: 2419 LSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHACII*SNSILRT*LN*DSLTPSLKIMM 2240
Query: 351 CSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
CSGF F EL *K GL IIS L D V T ALY E+ GH ELTT
Sbjct: 2239 CSGFLFSEL**KSNKSSLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTT 2060
Query: 171 AATEGLS 151
AA +G+S
Sbjct: 2059 AAIDGIS 2039
Score = 142 bits (304), Expect(2) = 9e-035
Identities = 69/179 (38%), Positives = 106/179 (59%)
Frame = -1 / -2
Query: 700 RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW* 521
RM+K L +VC + LV+QNM++ PC SNH SM +E++V + + ++ S +NI+
Sbjct: 2588 RMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDLAVNDCSWRNIIRA 2409
Query: 520 CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
RL+EL VVVLL N H +L P +I+KL CL LIQ N+ +L +L +IPENN V WF
Sbjct: 2408 SRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRLAYTIPENNDVLWF 2229
Query: 340 SLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCN 164
+ V+V Q FP+ + + + ++ +HF L + C I D+ PL+ ++ N
Sbjct: 2228 PIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*DEWPLS*AHNSSN 2052
Score = 90.9 bits (192), Expect(3) = 9e-040
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGGLNSLL +E S ++P V+QVPTII+GMDVSHG PGQ A V
Sbjct: 1887 YLTNVLLKINAKLGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQSDIPSIAAVV 2066
Query: 182 S 184
S
Sbjct: 2067 S 2069
Score = 66.6 bits (139), Expect(3) = 9e-040
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = +1 / +2
Query: 301 GITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDC 480
G RLL + +TR H+YFQGW + SV +* GSD GM VS * V ++V+ D
Sbjct: 2189 GTLVRLLLQFRE*ETRAHHYFQGWCKRVSVQSSS*Y*IGSDDAGMQVS**YVASEVYSDS 2368
Query: 481 CSKEPPHQVL 510
C +EPPH+VL
Sbjct: 2369 CPEEPPHKVL 2398
Score = 66.1 bits (138), Expect(2) = 3e-066
Identities = 29/49 (59%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
PG P +TSIP MMVGTC T GI + S +NEF PPS A IF L RY
Sbjct: 2032 PGEPWDTSIPTMMVGTCVTFGIAGERSIANNEFNPPSLAFIFRRTLVRY 1886
Score = 57.9 bits (120), Expect(4) = 2e-012
Identities = 35/68 (51%), Positives = 38/68 (55%)
Frame = -3 / -1
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP 366
F EEH + + RT CGGS Q S *T T H ET MP SDP Q * *T+ HP
Sbjct: 2433 FLEEHYQGLETGRTLCGGSSGQLSL*TSDATYHQETCMPASSDPIQY*ELD*TETRLHHP 2254
Query: 365 *K*LCVLV 342
*K* C LV
Sbjct: 2253 *K**CALV 2230
Score = 46.9 bits (96), Expect(3) = 9e-040
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1 / +2
Query: 577 ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
+L L + CW DWN KA+ L CS RD RR C+F++L
Sbjct: 2465 QL*FLSLRPCWHDWNYKANTLPCSV*RDWVCHRRPPRTCAFSVL 2596
Score = 46.4 bits (95), Expect(2) = e-107
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1 / +2
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
ED+C+AWW E V + ++ N AS++HH GC W
Sbjct: 1907 EDKCQAWWIEFVVSYGALTSNAKSNASSYHHCWDGCIPW 2023
Score = 41.8 bits (85), Expect(3) = 4e-007
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = +3 / +1
Query: 297 SGNH*STSTLALESENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSG 458
SGN T T NQ+T LFSGM +S + L+WIR RH SF M G
Sbjct: 2185 SGNSC*TFTTVQRIGNQSTSLFSGMV*ASLSSIKFLILNWIR*CRHASFLMIRG 2346
Score = 32.7 bits (65), Expect(4) = 2e-012
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3 / -1
Query: 698 NEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRS 579
N Q RL + SR EH + AL FQS QH R++S
Sbjct: 2586 NAQVLGGRLWQTQSRHTEHGNVLAL*FQSCQHGRRDRNQS 2467
Score = 30.4 bits (60), Expect(3) = 4e-007
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3 / +1
Query: 531 MFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFI 698
MF E + T S ML *LE QG MFC TR QT ++L I
Sbjct: 2419 MFLQEQSLTARSVTHATLISISAPMLA*LELQGQHITMFCMTRLGLPQTTSKNLCI 2586
Score = 27.2 bits (53), Expect(3) = 4e-007
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3 / +1
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMV 140
*R M SLV * RC +Q RK+ PS WM+ MV
Sbjct: 1906 *R*MPSLVD*IRC*LWSAHQQCQK*RKFLPSLLGWMYPMV 2025
Score = 27.2 bits (53), Expect(2) = 9e-035
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3 / -1
Query: 140 DHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQALH*SS 21
+H HP +*W LA + L T+S HQA H SS
Sbjct: 2025 NHGIHPSQQ*W*ELALLLALLVSAP*LTTNSIHQAWHLSS 1906
Score = 23.1 bits (44), Expect(4) = 2e-012
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1 / -2
Query: 58 QRVQTTKLCIDLHQQIKQV 2
QR+Q+TKL I L + I ++
Sbjct: 1943 QRIQSTKLGIYLQENIGEI 1887
Score = 23.1 bits (44), Expect(4) = 2e-012
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / -2
Query: 139 TM*NIHT*DDGGYLRHMWY 83
TM IH +DG LR+ W+
Sbjct: 2024 TMGYIHPNNDGRNLRYFWH 1968
>dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhead-like protein, partial
cds, clone: RAFL22-12-J01
Length = 1966
Score = 365 bits (791), Expect(2) = e-107
Identities = 140/188 (74%), Positives = 166/188 (88%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ RE L+DFY SS
Sbjct: 978 DIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLDFYYSS 1157
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
RKPEHIIIFRDGVSESQF QV+NIELDQ+++ACKFLD+ W PKFTVIVAQKNHHTKFF
Sbjct: 1158 ENRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFF 1337
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q+ PDNV PGT++DS++CHP+NFDFY+CAHAGMIGTTRPTHYHVL+DEIGF+ D++QE
Sbjct: 1338 QSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQEL 1517
Query: 692 VHSLSYVY 715
VHSLSYVY
Sbjct: 1518 VHSLSYVY 1541
Score = 208 bits (449), Expect(2) = 3e-066
Identities = 111/187 (59%), Positives = 121/187 (64%)
Frame = -2 / -1
Query: 711 T*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
T*D E T+S SS PISS RT * VGLVVPI+PA A *KSK G Q LS VPG T
Sbjct: 1537 T*DRECTSSWRSSVANPISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGT 1358
Query: 531 LSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIM 352
LSG KN VWWFF ATITVN G H SSRNLHA +I*S+S+L T +N* SLTPSLKI+M
Sbjct: 1357 LSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHACII*SNSILRT*LN*DSLTPSLKIMM 1178
Query: 351 CSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
CSGF F EL *K GL IIS L D V T ALY E+ GH ELTT
Sbjct: 1177 CSGFLFSEL**KSNKSSLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTT 998
Query: 171 AATEGLS 151
AA +G+S
Sbjct: 997 AAIDGIS 977
Score = 142 bits (304), Expect(2) = 9e-035
Identities = 69/179 (38%), Positives = 106/179 (59%)
Frame = -1 / -3
Query: 700 RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW* 521
RM+K L +VC + LV+QNM++ PC SNH SM +E++V + + ++ S +NI+
Sbjct: 1526 RMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDLAVNDCSWRNIIRA 1347
Query: 520 CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
RL+EL VVVLL N H +L P +I+KL CL LIQ N+ +L +L +IPENN V WF
Sbjct: 1346 SRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRLAYTIPENNDVLWF 1167
Query: 340 SLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCN 164
+ V+V Q FP+ + + + ++ +HF L + C I D+ PL+ ++ N
Sbjct: 1166 PIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*DEWPLS*AHNSSN 990
Score = 91.8 bits (194), Expect(3) = 5e-040
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGGLNSLL +E S+++P V+QVPTII+GMDVSHG PGQ A V
Sbjct: 825 YLTNVLLKINAKLGGLNSLLAMERSTAMPKVTQVPTIIVGMDVSHGSPGQSDIPSIAAVV 1004
Query: 182 S 184
S
Sbjct: 1005 S 1007
Score = 66.6 bits (139), Expect(3) = 5e-040
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = +1 / +2
Query: 301 GITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDC 480
G RLL + +TR H+YFQGW + SV +* GSD GM VS * V ++V+ D
Sbjct: 1127 GTLVRLLLQFRE*ETRAHHYFQGWCKRVSVQSSS*Y*IGSDDAGMQVS**YVASEVYSDS 1306
Query: 481 CSKEPPHQVL 510
C +EPPH+VL
Sbjct: 1307 CPEEPPHKVL 1336
Score = 66.1 bits (138), Expect(2) = 3e-066
Identities = 29/49 (59%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
PG P +TSIP MMVGTC T GI + S +NEF PPS A IF L RY
Sbjct: 970 PGEPWDTSIPTMMVGTCVTFGIAVERSIANNEFNPPSLAFIFRRTLVRY 824
Score = 57.9 bits (120), Expect(4) = 6e-013
Identities = 35/68 (51%), Positives = 38/68 (55%)
Frame = -3 / -2
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP 366
F EEH + + RT CGGS Q S *T T H ET MP SDP Q * *T+ HP
Sbjct: 1371 FLEEHYQGLETGRTLCGGSSGQLSL*TSDATYHQETCMPASSDPIQY*ELD*TETRLHHP 1192
Query: 365 *K*LCVLV 342
*K* C LV
Sbjct: 1191 *K**CALV 1168
Score = 46.9 bits (96), Expect(3) = 5e-040
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1 / +2
Query: 577 ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
+L L + CW DWN KA+ L CS RD RR C+F++L
Sbjct: 1403 QL*FLSLRPCWHDWNYKANTLPCSV*RDWVCHRRPPRTCAFSVL 1534
Score = 46.0 bits (94), Expect(2) = e-107
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1 / +2
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
ED+C+AWW E V + ++ N AS++HH GC W
Sbjct: 845 EDKCQAWWIEFVVSYGALNSNAKSNASSYHHCWDGCIPW 961
Score = 41.8 bits (85), Expect(3) = 1e-007
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = +3 / +1
Query: 297 SGNH*STSTLALESENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSG 458
SGN T T NQ+T LFSGM +S + L+WIR RH SF M G
Sbjct: 1123 SGNSC*TFTTVQRIGNQSTSLFSGMV*ASLSSIKFLILNWIR*CRHASFLMIRG 1284
Score = 32.7 bits (65), Expect(4) = 6e-013
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3 / -2
Query: 698 NEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRS 579
N Q RL + SR EH + AL FQS QH R++S
Sbjct: 1524 NAQVLGGRLWQTQSRHTEHGNVLAL*FQSCQHGRRDRNQS 1405
Score = 30.4 bits (60), Expect(3) = 1e-007
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3 / +1
Query: 531 MFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFI 698
MF E + T S ML *LE QG MFC TR QT ++L I
Sbjct: 1357 MFLQEQSLTARSVTHATLISISAPMLA*LELQGQHITMFCMTRLGLPQTTSKNLCI 1524
Score = 27.6 bits (54), Expect(3) = 1e-007
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3 / +1
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMV 140
*R M SLV * RC +Q RK+ PS WM+ MV
Sbjct: 844 *R*MPSLVD*IRC*LWSAQQQCQK*RKFLPSLLGWMYPMV 963
Score = 27.2 bits (53), Expect(2) = 9e-035
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3 / -2
Query: 140 DHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQALH*SS 21
+H HP +*W LA + L T+S HQA H SS
Sbjct: 963 NHGIHPSQQ*W*ELALLLALLLSAP*LTTNSIHQAWHLSS 844
Score = 23.1 bits (44), Expect(4) = 6e-013
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 58 QRVQTTKLCIDLHQQIKQV 2
QR+Q+TKL I L + I ++
Sbjct: 881 QRIQSTKLGIYLQENIGEI 825
Score = 23.1 bits (44), Expect(4) = 6e-013
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 139 TM*NIHT*DDGGYLRHMWY 83
TM IH +DG LR+ W+
Sbjct: 962 TMGYIHPNNDGRNLRYFWH 906
>emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE9 protein (At5g21150 gene)
Length = 2897
Score = 363 bits (786), Expect(2) = e-106
Identities = 139/188 (73%), Positives = 166/188 (88%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ RE L+DFY SS
Sbjct: 1924 DIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLDFYYSS 2103
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
RKPEHIIIFRDGVSESQF QV+NIELDQ+++ACKFLD+ W PKFTVIVAQKNHHTKFF
Sbjct: 2104 ENRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFF 2283
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q+ PDNV PGT++DS++CHP+NFDFY+CAHAGMIGTTRPTHYHVL+DEIGF+ D++QE
Sbjct: 2284 QSRGPDNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQEL 2463
Query: 692 VHSLSYVY 715
VHSLS+VY
Sbjct: 2464 VHSLSHVY 2487
Score = 206 bits (444), Expect(2) = 1e-065
Identities = 110/187 (58%), Positives = 120/187 (64%)
Frame = -2 / -1
Query: 711 T*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
T D E T+S SS PISS RT * VGLVVPI+PA A *KSK G Q LS VPG T
Sbjct: 2483 TWDRECTSSWRSSVANPISSYRTW*CVGLVVPIMPAWAQR*KSKLRG*QIWLSMIVPGGT 2304
Query: 531 LSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIM 352
LSG KN VWWFF ATITVN G H SSRNLHA +I*S+S+L T +N* SLTPSLKI+M
Sbjct: 2303 LSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHACII*SNSILRT*LN*DSLTPSLKIMM 2124
Query: 351 CSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
CSGF F EL *K GL IIS L D V T ALY E+ GH ELTT
Sbjct: 2123 CSGFLFSEL**KSNKSSLNIPSSLPLTGLKRLSIISILRDCVRTHALYFEMSGHCLELTT 1944
Query: 171 AATEGLS 151
AA +G+S
Sbjct: 1943 AAIDGIS 1923
Score = 142 bits (304), Expect(2) = 9e-035
Identities = 69/179 (38%), Positives = 106/179 (59%)
Frame = -1 / -3
Query: 700 RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW* 521
RM+K L +VC + LV+QNM++ PC SNH SM +E++V + + ++ S +NI+
Sbjct: 2472 RMHKFLEVVCGKPNLVIQNMVMCWPCSSNHASMGAEIEIKVAWVTDLAVNDCSWRNIIRA 2293
Query: 520 CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
RL+EL VVVLL N H +L P +I+KL CL LIQ N+ +L +L +IPENN V WF
Sbjct: 2292 SRLEELCVVVLLGNYHCKLRMPRIIKKLACLHHLIQFNIKNLIELRLAYTIPENNDVLWF 2113
Query: 340 SLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCN 164
+ V+V Q FP+ + + + ++ +HF L + C I D+ PL+ ++ N
Sbjct: 2112 PIL*TVVKV*QEFPEHSFVFAIDGFEEIINHFHFA*LCAYTCLIF*DEWPLS*AHNSSN 1936
Score = 90.9 bits (192), Expect(3) = 3e-039
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGGLNSLL +E S ++P V+QVPTII+GMDVSHG PGQ A V
Sbjct: 1771 YLTNVLLKINAKLGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQSDIPSIAAVV 1950
Query: 182 S 184
S
Sbjct: 1951 S 1953
Score = 66.6 bits (139), Expect(3) = 3e-039
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = +1 / +3
Query: 301 GITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDC 480
G RLL + +TR H+YFQGW + SV +* GSD GM VS * V ++V+ D
Sbjct: 2073 GTLVRLLLQFRE*ETRAHHYFQGWCKRVSVQSSS*Y*IGSDDAGMQVS**YVASEVYSDS 2252
Query: 481 CSKEPPHQVL 510
C +EPPH+VL
Sbjct: 2253 CPEEPPHKVL 2282
Score = 66.1 bits (138), Expect(2) = 1e-065
Identities = 29/49 (59%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
PG P +TSIP MMVGTC T GI + S +NEF PPS A IF L RY
Sbjct: 1916 PGEPWDTSIPTMMVGTCVTFGIAGERSIANNEFNPPSLAFIFRRTLVRY 1770
Score = 57.9 bits (120), Expect(4) = 2e-012
Identities = 35/68 (51%), Positives = 38/68 (55%)
Frame = -3 / -2
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP 366
F EEH + + RT CGGS Q S *T T H ET MP SDP Q * *T+ HP
Sbjct: 2317 FLEEHYQGLETGRTLCGGSSGQLSL*TSDATYHQETCMPASSDPIQY*ELD*TETRLHHP 2138
Query: 365 *K*LCVLV 342
*K* C LV
Sbjct: 2137 *K**CALV 2114
Score = 46.4 bits (95), Expect(2) = e-106
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
ED+C+AWW E V + ++ N AS++HH GC W
Sbjct: 1791 EDKCQAWWIEFVVSYGALTSNAKSNASSYHHCWDGCIPW 1907
Score = 45.1 bits (92), Expect(3) = 3e-039
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1 / +3
Query: 577 ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAI 705
+L L + CW DWN KA+ L CS RD RR C+F++
Sbjct: 2349 QL*FLSLRPCWHDWNYKANTLPCSV*RDWVCHRRPPRTCAFSV 2477
Score = 41.8 bits (85), Expect(3) = 4e-007
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = +3 / +2
Query: 297 SGNH*STSTLALESENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSG 458
SGN T T NQ+T LFSGM +S + L+WIR RH SF M G
Sbjct: 2069 SGNSC*TFTTVQRIGNQSTSLFSGMV*ASLSSIKFLILNWIR*CRHASFLMIRG 2230
Score = 32.7 bits (65), Expect(4) = 2e-012
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3 / -2
Query: 698 NEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRS 579
N Q RL + SR EH + AL FQS QH R++S
Sbjct: 2470 NAQVLGGRLWQTQSRHTEHGNVLAL*FQSCQHGRRDRNQS 2351
Score = 30.4 bits (60), Expect(3) = 4e-007
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3 / +2
Query: 531 MFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFI 698
MF E + T S ML *LE QG MFC TR QT ++L I
Sbjct: 2303 MFLQEQSLTARSVTHATLISISAPMLA*LELQGQHITMFCMTRLGLPQTTSKNLCI 2470
Score = 27.2 bits (53), Expect(3) = 4e-007
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3 / +2
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMV 140
*R M SLV * RC +Q RK+ PS WM+ MV
Sbjct: 1790 *R*MPSLVD*IRC*LWSAHQQCQK*RKFLPSLLGWMYPMV 1909
Score = 27.2 bits (53), Expect(2) = 9e-035
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3 / -2
Query: 140 DHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQALH*SS 21
+H HP +*W LA + L T+S HQA H SS
Sbjct: 1909 NHGIHPSQQ*W*ELALLLALLVSAP*LTTNSIHQAWHLSS 1790
Score = 23.1 bits (44), Expect(4) = 2e-012
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 58 QRVQTTKLCIDLHQQIKQV 2
QR+Q+TKL I L + I ++
Sbjct: 1827 QRIQSTKLGIYLQENIGEI 1771
Score = 23.1 bits (44), Expect(4) = 2e-012
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 139 TM*NIHT*DDGGYLRHMWY 83
TM IH +DG LR+ W+
Sbjct: 1908 TMGYIHPNNDGRNLRYFWH 1852
>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
mRNA, complete cds
Length = 3171
Score = 375 bits (813), Expect(2) = e-103
Identities = 146/188 (77%), Positives = 168/188 (89%)
Frame = +2 / +2
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSR+WPLIS+YRASV TQ ++ EM+ SL K GT+DDG+I+E L+DFYTSS
Sbjct: 2138 DVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVDFYTSS 2317
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
KRKPEHIIIFRDGVSESQF QV+NIELDQIIEACK LD W+PKF ++VAQKNHHTKFF
Sbjct: 2318 NKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 2497
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q SP+NV PGT++D+K+CHPKN DFY+CAHAGMIGTTRPTHYHVL+DEIGFSADE+QE
Sbjct: 2498 QPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQEL 2677
Query: 692 VHSLSYVY 715
VHSLSYVY
Sbjct: 2678 VHSLSYVY 2701
Score = 192 bits (413), Expect(3) = 1e-060
Identities = 109/188 (57%), Positives = 122/188 (64%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+S SSAEKPISS RT * VG VVPIIPA A *KS F G LLS VPG
Sbjct: 2700 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILLSMIVPGG 2521
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
T SGD KNLV FF*AT N G F+S++L ASMI*SSS+ T +N* SLTPSLKI+
Sbjct: 2520 TFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSLTPSLKIM 2341
Query: 354 MCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELT 175
+CSGF ELV*K L + IIS+L V TDALYL+I GH ELT
Sbjct: 2340 ICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDISGHSLELT 2161
Query: 174 TAATEGLS 151
TAA +G S
Sbjct: 2160 TAAMDGTS 2137
Score = 141 bits (303), Expect(2) = 3e-033
Identities = 74/188 (39%), Positives = 112/188 (59%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+ R++K L V +T L++Q+++V SNH S+ T VE+ VL + F ++ +
Sbjct: 2701 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWR 2522
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NI L+ELG+++LLS+ EL P+ + +L LDDLI+ N+ +L +L FT +IPEN
Sbjct: 2521 NIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTHTIPENY 2342
Query: 355 YVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTN 176
+ WFSL RA VE+ Q D AI+ S+ L + +H RL + CSI + PL RT+
Sbjct: 2341 DMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTH 2162
Query: 175 HRCNRRSI 152
H + R I
Sbjct: 2161 HSSDGRDI 2138
Score = 87.7 bits (185), Expect(4) = 2e-032
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLNS+L VE + + +S+VPTIILGMDVSHG PGQ A V
Sbjct: 1985 YLTNLLLKINAKLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQSDVPSIAAVV 2164
Query: 182 S 184
S
Sbjct: 2165 S 2167
Score = 54.2 bits (112), Expect(4) = 2e-032
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +1 / +1
Query: 289 WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM 435
W + G+ R LH L KTR ++ FQGW +* S+ G ++* SDHRG+
Sbjct: 2275 WHYQGVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGL 2421
Score = 52.4 bits (108), Expect = 2e-005
Identities = 33/88 (37%), Positives = 42/88 (47%)
Frame = -3 / -2
Query: 539 EEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K 360
EEH + RTW SFE ++ T + PR*SD Q P * + H HP*K
Sbjct: 2525 EEHFQETLAGRTWYDDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*K 2346
Query: 359 *LCVLVFAFQS*CRSRSVIPG*GHHHQY 276
LVF++ S CR+ P * H Q+
Sbjct: 2345 L*YALVFSYSSWCRNLPATP**CHRLQF 2262
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 69 STCSNEFRPPSFALIFISKLSRY 1
ST + EFRPPSFALIF SKL RY
Sbjct: 2052 STLNIEFRPPSFALIFRSKLVRY 1984
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCD 94
T A CPG PCETSIP++MVGT +
Sbjct: 2160 TAAMDGTSDCPGDPCETSIPRIMVGTLE 2077
Score = 33.1 bits (66), Expect(4) = 2e-032
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / +1
Query: 589 LHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
L +C+ W+DWN + L D F R +G C A+L V
Sbjct: 2575 LPLCSRWNDWNYPPNSLPRPV**DWFFS*RTSGTCPLALLCV 2700
Score = 24.0 bits (46), Expect(2) = e-103
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 99 KYPPSS*VWMFHMVIQDKI 155
++ P S WMFHM + D +
Sbjct: 2082 RFQPLSLGWMFHMDLLDSL 2138
Score = 22.6 bits (43), Expect(2) = 3e-033
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / -3
Query: 151 LSWMTM*NIHT*DDGGYLRH 92
LS +M*NIH D+G LR+
Sbjct: 2134 LSRRSM*NIHPKDNGWNLRN 2075
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 484 SKEPPHQVLSDGITRQCSS 540
SKE +QVL ++ +CSS
Sbjct: 2470 SKESSYQVLPANVS*KCSS 2526
>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA,
complete cds
Length = 3166
Score = 375 bits (813), Expect(2) = e-103
Identities = 146/188 (77%), Positives = 168/188 (89%)
Frame = +2 / +2
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSR+WPLIS+YRASV TQ ++ EM+ SL K GT+DDG+I+E L+DFYTSS
Sbjct: 2138 DVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVDFYTSS 2317
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
KRKPEHIIIFRDGVSESQF QV+NIELDQIIEACK LD W+PKF ++VAQKNHHTKFF
Sbjct: 2318 NKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 2497
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q SP+NV PGT++D+K+CHPKN DFY+CAHAGMIGTTRPTHYHVL+DEIGFSADE+QE
Sbjct: 2498 QPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQEL 2677
Query: 692 VHSLSYVY 715
VHSLSYVY
Sbjct: 2678 VHSLSYVY 2701
Score = 192 bits (413), Expect(3) = 1e-060
Identities = 109/188 (57%), Positives = 122/188 (64%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+S SSAEKPISS RT * VG VVPIIPA A *KS F G LLS VPG
Sbjct: 2700 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILLSMIVPGG 2521
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
T SGD KNLV FF*AT N G F+S++L ASMI*SSS+ T +N* SLTPSLKI+
Sbjct: 2520 TFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSLTPSLKIM 2341
Query: 354 MCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELT 175
+CSGF ELV*K L + IIS+L V TDALYL+I GH ELT
Sbjct: 2340 ICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDISGHSLELT 2161
Query: 174 TAATEGLS 151
TAA +G S
Sbjct: 2160 TAAMDGTS 2137
Score = 141 bits (303), Expect(2) = 3e-033
Identities = 74/188 (39%), Positives = 112/188 (59%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+ R++K L V +T L++Q+++V SNH S+ T VE+ VL + F ++ +
Sbjct: 2701 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWR 2522
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NI L+ELG+++LLS+ EL P+ + +L LDDLI+ N+ +L +L FT +IPEN
Sbjct: 2521 NIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTHTIPENY 2342
Query: 355 YVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTN 176
+ WFSL RA VE+ Q D AI+ S+ L + +H RL + CSI + PL RT+
Sbjct: 2341 DMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTH 2162
Query: 175 HRCNRRSI 152
H + R I
Sbjct: 2161 HSSDGRDI 2138
Score = 87.7 bits (185), Expect(4) = 2e-032
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLNS+L VE + + +S+VPTIILGMDVSHG PGQ A V
Sbjct: 1985 YLTNLLLKINAKLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQSDVPSIAAVV 2164
Query: 182 S 184
S
Sbjct: 2165 S 2167
Score = 54.2 bits (112), Expect(4) = 2e-032
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +1 / +1
Query: 289 WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM 435
W + G+ R LH L KTR ++ FQGW +* S+ G ++* SDHRG+
Sbjct: 2275 WHYQGVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGL 2421
Score = 52.4 bits (108), Expect = 2e-005
Identities = 33/88 (37%), Positives = 42/88 (47%)
Frame = -3 / -3
Query: 539 EEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K 360
EEH + RTW SFE ++ T + PR*SD Q P * + H HP*K
Sbjct: 2525 EEHFQETLAGRTWYDDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*K 2346
Query: 359 *LCVLVFAFQS*CRSRSVIPG*GHHHQY 276
LVF++ S CR+ P * H Q+
Sbjct: 2345 L*YALVFSYSSWCRNLPATP**CHRLQF 2262
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 69 STCSNEFRPPSFALIFISKLSRY 1
ST + EFRPPSFALIF SKL RY
Sbjct: 2052 STLNIEFRPPSFALIFRSKLVRY 1984
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCD 94
T A CPG PCETSIP++MVGT +
Sbjct: 2160 TAAMDGTSDCPGDPCETSIPRIMVGTLE 2077
Score = 33.1 bits (66), Expect(4) = 2e-032
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / +1
Query: 589 LHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
L +C+ W+DWN + L D F R +G C A+L V
Sbjct: 2575 LPLCSRWNDWNYPPNSLPRPV**DWFFS*RTSGTCPLALLCV 2700
Score = 24.0 bits (46), Expect(2) = e-103
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 99 KYPPSS*VWMFHMVIQDKI 155
++ P S WMFHM + D +
Sbjct: 2082 RFQPLSLGWMFHMDLLDSL 2138
Score = 22.6 bits (43), Expect(2) = 3e-033
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 151 LSWMTM*NIHT*DDGGYLRH 92
LS +M*NIH D+G LR+
Sbjct: 2134 LSRRSM*NIHPKDNGWNLRN 2075
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 484 SKEPPHQVLSDGITRQCSS 540
SKE +QVL ++ +CSS
Sbjct: 2470 SKESSYQVLPANVS*KCSS 2526
>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
mRNA, complete cds
Length = 2806
Score = 375 bits (813), Expect(2) = e-103
Identities = 146/188 (77%), Positives = 168/188 (89%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSR+WPLIS+YRASV TQ ++ EM+ SL K GT+DDG+I+E L+DFYTSS
Sbjct: 2008 DVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVDFYTSS 2187
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
KRKPEHIIIFRDGVSESQF QV+NIELDQIIEACK LD W+PKF ++VAQKNHHTKFF
Sbjct: 2188 NKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 2367
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q SP+NV PGT++D+K+CHPKN DFY+CAHAGMIGTTRPTHYHVL+DEIGFSADE+QE
Sbjct: 2368 QPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQEL 2547
Query: 692 VHSLSYVY 715
VHSLSYVY
Sbjct: 2548 VHSLSYVY 2571
Score = 192 bits (413), Expect(3) = 1e-060
Identities = 109/188 (57%), Positives = 122/188 (64%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+S SSAEKPISS RT * VG VVPIIPA A *KS F G LLS VPG
Sbjct: 2570 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILLSMIVPGG 2391
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
T SGD KNLV FF*AT N G F+S++L ASMI*SSS+ T +N* SLTPSLKI+
Sbjct: 2390 TFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSLTPSLKIM 2211
Query: 354 MCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELT 175
+CSGF ELV*K L + IIS+L V TDALYL+I GH ELT
Sbjct: 2210 ICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDISGHSLELT 2031
Query: 174 TAATEGLS 151
TAA +G S
Sbjct: 2030 TAAMDGTS 2007
Score = 141 bits (303), Expect(2) = 3e-033
Identities = 74/188 (39%), Positives = 112/188 (59%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+ R++K L V +T L++Q+++V SNH S+ T VE+ VL + F ++ +
Sbjct: 2571 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWR 2392
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NI L+ELG+++LLS+ EL P+ + +L LDDLI+ N+ +L +L FT +IPEN
Sbjct: 2391 NIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTHTIPENY 2212
Query: 355 YVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTN 176
+ WFSL RA VE+ Q D AI+ S+ L + +H RL + CSI + PL RT+
Sbjct: 2211 DMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTH 2032
Query: 175 HRCNRRSI 152
H + R I
Sbjct: 2031 HSSDGRDI 2008
Score = 87.7 bits (185), Expect(4) = 2e-032
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLNS+L VE + + +S+VPTIILGMDVSHG PGQ A V
Sbjct: 1855 YLTNLLLKINAKLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQSDVPSIAAVV 2034
Query: 182 S 184
S
Sbjct: 2035 S 2037
Score = 54.2 bits (112), Expect(4) = 2e-032
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +1 / +3
Query: 289 WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM 435
W + G+ R LH L KTR ++ FQGW +* S+ G ++* SDHRG+
Sbjct: 2145 WHYQGVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGL 2291
Score = 52.4 bits (108), Expect = 2e-005
Identities = 33/88 (37%), Positives = 42/88 (47%)
Frame = -3 / -1
Query: 539 EEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K 360
EEH + RTW SFE ++ T + PR*SD Q P * + H HP*K
Sbjct: 2395 EEHFQETLAGRTWYDDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*K 2216
Query: 359 *LCVLVFAFQS*CRSRSVIPG*GHHHQY 276
LVF++ S CR+ P * H Q+
Sbjct: 2215 L*YALVFSYSSWCRNLPATP**CHRLQF 2132
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 69 STCSNEFRPPSFALIFISKLSRY 1
ST + EFRPPSFALIF SKL RY
Sbjct: 1922 STLNIEFRPPSFALIFRSKLVRY 1854
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCD 94
T A CPG PCETSIP++MVGT +
Sbjct: 2030 TAAMDGTSDCPGDPCETSIPRIMVGTLE 1947
Score = 33.1 bits (66), Expect(4) = 2e-032
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / +3
Query: 589 LHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
L +C+ W+DWN + L D F R +G C A+L V
Sbjct: 2445 LPLCSRWNDWNYPPNSLPRPV**DWFFS*RTSGTCPLALLCV 2570
Score = 24.0 bits (46), Expect(2) = e-103
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 99 KYPPSS*VWMFHMVIQDKI 155
++ P S WMFHM + D +
Sbjct: 1952 RFQPLSLGWMFHMDLLDSL 2008
Score = 22.6 bits (43), Expect(2) = 3e-033
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / -2
Query: 151 LSWMTM*NIHT*DDGGYLRH 92
LS +M*NIH D+G LR+
Sbjct: 2004 LSRRSM*NIHPKDNGWNLRN 1945
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1 / +3
Query: 484 SKEPPHQVLSDGITRQCSS 540
SKE +QVL ++ +CSS
Sbjct: 2340 SKESSYQVLPANVS*KCSS 2396
>emb|AX505699.1| Sequence 394 from Patent WO0216655
Length = 2793
Score = 375 bits (813), Expect(2) = e-103
Identities = 146/188 (77%), Positives = 168/188 (89%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSR+WPLIS+YRASV TQ ++ EM+ SL K GT+DDG+I+E L+DFYTSS
Sbjct: 2026 DVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKELLVDFYTSS 2205
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
KRKPEHIIIFRDGVSESQF QV+NIELDQIIEACK LD W+PKF ++VAQKNHHTKFF
Sbjct: 2206 NKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 2385
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q SP+NV PGT++D+K+CHPKN DFY+CAHAGMIGTTRPTHYHVL+DEIGFSADE+QE
Sbjct: 2386 QPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQEL 2565
Query: 692 VHSLSYVY 715
VHSLSYVY
Sbjct: 2566 VHSLSYVY 2589
Score = 192 bits (413), Expect(3) = 1e-060
Identities = 109/188 (57%), Positives = 122/188 (64%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+S SSAEKPISS RT * VG VVPIIPA A *KS F G LLS VPG
Sbjct: 2588 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILLSMIVPGG 2409
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
T SGD KNLV FF*AT N G F+S++L ASMI*SSS+ T +N* SLTPSLKI+
Sbjct: 2408 TFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSLTPSLKIM 2229
Query: 354 MCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELT 175
+CSGF ELV*K L + IIS+L V TDALYL+I GH ELT
Sbjct: 2228 ICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRDSIISALEGCVRTDALYLDISGHSLELT 2049
Query: 174 TAATEGLS 151
TAA +G S
Sbjct: 2048 TAAMDGTS 2025
Score = 141 bits (303), Expect(2) = 3e-033
Identities = 74/188 (39%), Positives = 112/188 (59%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+ R++K L V +T L++Q+++V SNH S+ T VE+ VL + F ++ +
Sbjct: 2589 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWR 2410
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NI L+ELG+++LLS+ EL P+ + +L LDDLI+ N+ +L +L FT +IPEN
Sbjct: 2409 NIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTHTIPENY 2230
Query: 355 YVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTN 176
+ WFSL RA VE+ Q D AI+ S+ L + +H RL + CSI + PL RT+
Sbjct: 2229 DMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTH 2050
Query: 175 HRCNRRSI 152
H + R I
Sbjct: 2049 HSSDGRDI 2026
Score = 87.7 bits (185), Expect(4) = 2e-032
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLNS+L VE + + +S+VPTIILGMDVSHG PGQ A V
Sbjct: 1873 YLTNLLLKINAKLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQSDVPSIAAVV 2052
Query: 182 S 184
S
Sbjct: 2053 S 2055
Score = 54.2 bits (112), Expect(4) = 2e-032
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +1 / +3
Query: 289 WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM 435
W + G+ R LH L KTR ++ FQGW +* S+ G ++* SDHRG+
Sbjct: 2163 WHYQGVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGL 2309
Score = 52.4 bits (108), Expect = 2e-005
Identities = 33/88 (37%), Positives = 42/88 (47%)
Frame = -3 / -3
Query: 539 EEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K 360
EEH + RTW SFE ++ T + PR*SD Q P * + H HP*K
Sbjct: 2413 EEHFQETLAGRTWYDDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*K 2234
Query: 359 *LCVLVFAFQS*CRSRSVIPG*GHHHQY 276
LVF++ S CR+ P * H Q+
Sbjct: 2233 L*YALVFSYSSWCRNLPATP**CHRLQF 2150
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 69 STCSNEFRPPSFALIFISKLSRY 1
ST + EFRPPSFALIF SKL RY
Sbjct: 1940 STLNIEFRPPSFALIFRSKLVRY 1872
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCD 94
T A CPG PCETSIP++MVGT +
Sbjct: 2048 TAAMDGTSDCPGDPCETSIPRIMVGTLE 1965
Score = 33.1 bits (66), Expect(4) = 2e-032
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / +3
Query: 589 LHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
L +C+ W+DWN + L D F R +G C A+L V
Sbjct: 2463 LPLCSRWNDWNYPPNSLPRPV**DWFFS*RTSGTCPLALLCV 2588
Score = 24.0 bits (46), Expect(2) = e-103
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 99 KYPPSS*VWMFHMVIQDKI 155
++ P S WMFHM + D +
Sbjct: 1970 RFQPLSLGWMFHMDLLDSL 2026
Score = 22.6 bits (43), Expect(2) = 3e-033
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 151 LSWMTM*NIHT*DDGGYLRH 92
LS +M*NIH D+G LR+
Sbjct: 2022 LSRRSM*NIHPKDNGWNLRN 1963
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1 / +3
Query: 484 SKEPPHQVLSDGITRQCSS 540
SKE +QVL ++ +CSS
Sbjct: 2358 SKESSYQVLPANVS*KCSS 2414
>ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 mRNA, complete cds
Length = 2637
Score = 237 bits (512), Expect(3) = 1e-095
Identities = 95/143 (66%), Positives = 114/143 (79%)
Frame = +2 / +1
Query: 284 DDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSP 463
D+G++ E ++FY +S RKP+ IIIFRDGVSESQF QV+ IE+DQII+A + L E P
Sbjct: 2038 DNGIMNELFVEFYRTSRARKPKQIIIFRDGVSESQFEQVLKIEVDQIIKAYQRLGESDVP 2217
Query: 464 KFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYH 643
KFTVIVAQKNHHTK FQ P+NV GTVVD+K+ HP N+DFYMCAHAG IGT+RP HYH
Sbjct: 2218 KFTVIVAQKNHHTKLFQAKGPENVPAGTVVDTKIVHPTNYDFYMCAHAGKIGTSRPAHYH 2397
Query: 644 VLHDEIGFSADEMQEFVHSLSYV 712
VL DEIGFS D++Q +HSLSYV
Sbjct: 2398 VLLDEIGFSPDDLQNLIHSLSYV 2466
Score = 142 bits (304), Expect(3) = 1e-045
Identities = 73/125 (58%), Positives = 83/125 (66%)
Frame = -2 / -2
Query: 711 T*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
T*+ E C SS EKPISS T * GL VPI PA AHM*KS F+G L+STTVP T
Sbjct: 2465 T*EREWMRFCKSSGEKPISSSNTW**AGLEVPIFPA*AHM*KS*FVGCTILVSTTVPAGT 2286
Query: 531 LSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIM 352
SG * NLVWWFF*AT+TVN G S R +A +I S+S+ T N SLTPSLK+I+
Sbjct: 2285 FSGPLA*NNLVWWFF*ATMTVNFGTSDSPRR*YAFIIWSTSIFKTCSNCDSLTPSLKMII 2106
Query: 351 CSGFR 337
C GFR
Sbjct: 2105 CLGFR 2091
Score = 88.6 bits (187), Expect(2) = 3e-024
Identities = 49/139 (35%), Positives = 79/139 (56%)
Frame = -1 / -1
Query: 700 RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW* 521
RM+++L ++ ET L+ M++ S M THV++ V R+ + +H SS +NI
Sbjct: 2454 RMDEILQVIGGETNLIK*YMVMSRS*SSYFSCMSTHVKIVVCRVYDLGVHDSSCRNIFRT 2275
Query: 520 CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
LK+LGVVVLLS+N SE + L L +L+ ++ DL +L FT +IPEN+ + F
Sbjct: 2274 LSLKQLGVVVLLSHNDSEFWHIRFTKTLIRLYNLVHFDLQDLLEL*FTHTIPENDNLLRF 2095
Query: 340 SLSRASVEVDQ*FPDEAII 284
+E+ +*F + +I
Sbjct: 2094 PCPACPIELYK*FVHDTVI 2038
Score = 83.5 bits (176), Expect(3) = 1e-095
Identities = 32/50 (64%), Positives = 44/50 (88%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
YL N+L+KIN+KLGG+NSLL +E S +IP ++++PT+ILGMDVSHG PG+
Sbjct: 1744 YLTNVLLKINSKLGGINSLLGIEYSYNIPLINKIPTLILGMDVSHGPPGR 1893
Score = 71.2 bits (149), Expect(3) = 1e-095
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDG 292
D PSVAAVV S+ WPLISRYRA+V TQS RLEM+ SLF+P + G
Sbjct: 1897 DVPSVAAVVGSKCWPLISRYRAAVRTQSPRLEMIDSLFQPIENTEKG 2037
Score = 61.1 bits (127), Expect(3) = 1e-012
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +1 / +3
Query: 295 HPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHC 474
H I R+L +T +FQGW +* +V + +G +++G+ S * ++HC
Sbjct: 2049 HERIICRVLSDKQGTET*ADYHFQGWCE*ITVRASLEDRSGPNYKGVSTSW*I*CAKIHC 2228
Query: 475 DCCSKEPPHQVLSDGITRQCSSWNCGG 555
C S+EPPHQV+S + +CS NC G
Sbjct: 2229 HCGSEEPPHQVVSS*GS*KCSCRNCRG 2309
Score = 58.8 bits (122), Expect = 2e-007
Identities = 34/90 (37%), Positives = 42/90 (46%)
Frame = -3 / -3
Query: 683 ASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHCLVMPSERT 504
AS RN S + H + L F H HTC++RS + + P QF +EH E T
Sbjct: 2437 ASHRGRNQSHQVIHGNEPVLKFLFFLHEHTCKNRSLSGVRSWCPRQFLQEHFQDP*LETT 2258
Query: 503 WCGGSFEQQSQ*TWVTTSHPETYMPR*SDP 414
WCGGS E Q Q* H + P * P
Sbjct: 2257 WCGGSSEPQ*Q*ILAHQIHQDVDTPL*FGP 2168
Score = 46.4 bits (95), Expect(3) = 1e-045
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = -2 / -2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
G +E IIS D V T ALYLEI+G E TTAATEG S
Sbjct: 2015 GWKSESIISRRGD*VLTAALYLEIKGQHFEPTTAATEGTS 1896
Score = 45.5 bits (93), Expect(2) = 3e-024
Identities = 26/64 (40%), Positives = 32/64 (50%)
Frame = -2 / -2
Query: 192 H*RELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISK 13
H T A + PG P +TSIPK+ VG G+ + S + E PPSF IF S
Sbjct: 1934 HFEPTTAATEGTSARPGGP*DTSIPKIKVGILFINGML*EYSIPNRELMPPSFEFIFRST 1755
Query: 12 LSRY 1
L RY
Sbjct: 1754 LVRY 1743
Score = 35.4 bits (71), Expect(3) = 1e-045
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1 / -1
Query: 148 SWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
+W M IHT + GG + W R QQR+ +KL I L + I ++
Sbjct: 1890 TWRPMRYIHTQNQGGNFVYQWNVVRVLYSQQRIDASKLRIYLQKYIGEI 1744
Score = 31.3 bits (62), Expect(3) = 1e-012
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1 / +3
Query: 577 ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
+LR LHVC+C + N K L C D FL R A F++L
Sbjct: 2331 KLRFLHVCSCRKNRNFKTGSLPCIT**DWFLPR*LAESHPFSLL 2462
Score = 25.8 bits (50), Expect(3) = 1e-012
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3 / +2
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQ 146
*R ++SL C + L +H K+PP VWM+ M +Q
Sbjct: 1763 *R*IRSLEASILCWE*STLTTFH**TKFPP*FWVWMYLMGLQ 1888
>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
sequence
Length = 99345
Score = 79.0 bits (166), Expect(8) = 9e-095
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2 / -1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GTTRPTHYHVL+DEIGFSADE+QE VHSLSYVY
Sbjct: 36762 GTTRPTHYHVLYDEIGFSADELQELVHSLSYVY 36664
Score = 76.2 bits (160), Expect(8) = 9e-095
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +2 / -2
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPG 544
+ACK LD W+PKF ++VAQKNHHTKFFQ SP+NV PG
Sbjct: 37115 QACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPG 36999
Score = 72.5 bits (152), Expect(8) = 9e-095
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESL 310
VVSSR+WPLIS+YRASV TQ ++ EM+ SL K GT+DDG+I+ +L
Sbjct: 37629 VVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKCAL 37492
Score = 64.3 bits (134), Expect(8) = 9e-095
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +2 / -3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
+LGGLNS+L VE + + +S+VPTIILGMDVSHG PGQ
Sbjct: 37864 QLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQ 37748
Score = 60.2 bits (125), Expect(8) = 9e-095
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = +2 / -3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GT++D+K+CHPKN DFY+CAHAGMI
Sbjct: 36922 GTIIDNKICHPKNNDFYLCAHAGMI 36848
Score = 52.4 bits (108), Expect(8) = 9e-095
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +2 / -2
Query: 299 RESLIDFYTSSGKRKPEHIIIFRDGVSE 382
RE L+DFYTSS KRKPEHIIIFR SE
Sbjct: 37409 RELLVDFYTSSNKRKPEHIIIFRYVTSE 37326
Score = 48.3 bits (99), Expect(8) = 9e-095
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2 / -2
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQIIE
Sbjct: 37259 RDGVSESQFNQVLNIELDQIIE 37194
Score = 43.7 bits (89), Expect(8) = 1e-034
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / +2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*+SE T+S SSAEKPISS RT * VG VVP
Sbjct: 36665 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVP 36763
Score = 42.3 bits (86), Expect(8) = 1e-034
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2 / +3
Query: 186 RELTTAATEGLSCPG*PCETSIPKMMVGTCD 94
+ T A CPG PCETSIP++MVGT +
Sbjct: 37713 KHFTAAMDGTSDCPGDPCETSIPRIMVGTLE 37805
Score = 40.5 bits (82), Expect(2) = 0.002
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -2 / +2
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
L + IIS+L V TDALYL+I GH ELTT
Sbjct: 37535 LTRDSIISALEGCVRTDALYLDISGHSLELTT 37630
Score = 40.5 bits (82), Expect(8) = 1e-034
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -2 / +1
Query: 543 PGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
PG T SGD KNLV FF*AT N G F+S++L A
Sbjct: 37000 PGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQA 37113
Score = 34.1 bits (68), Expect(8) = 1e-034
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1 / +3
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
+IPEN + WFSL RA VE+ Q P
Sbjct: 37335 NIPENYDMLWFSLIRAGVEIYQQLP 37409
Score = 30.9 bits (61), Expect(8) = 1e-034
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -2 / +1
Query: 429 SMI*SSSMLMTWVN*LSLTPSLKII 355
SMI*SSS+ T +N* SLTPSL+ +
Sbjct: 37195 SMI*SSSIFRT*LN*DSLTPSLEAL 37269
Score = 28.6 bits (56), Expect(3) = 5e-004
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1 / +3
Query: 514 LKELGVVVLLSNNHSELG*PLLIQKLTCL 428
L+ELG+++LLS+ EL P+ + +L L
Sbjct: 37029 LEELGMMILLSHQQKELWVPICV*ELASL 37115
Score = 28.6 bits (56), Expect(8) = 1e-034
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -2 / +3
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVPGR 535
IIPA A *KS F G LLS VP +
Sbjct: 36849 IIPA*AQR*KSLFFG*HILLSMIVPAK 36929
Score = 27.2 bits (53), Expect(8) = 1e-034
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1 / +1
Query: 298 DEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNH 173
D AI+ S+ L + +H RL + CSI + PL RT+H
Sbjct: 37504 DNAIVFSSIFLDKGLNHLSLRRLCPNRCSIFGYQWPLPRTHH 37629
Score = 27.2 bits (53), Expect(3) = 5e-004
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 366 LKIIMCSGFRFPELV*K 316
LKI++CSGF ELV*K
Sbjct: 37342 LKIMICSGFLLFELV*K 37392
Score = 26.3 bits (51), Expect(8) = 9e-095
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 2 YLLNLLMKINAKL 40
YL NLL+KINAK+
Sbjct: 37974 YLTNLLLKINAKV 37936
Score = 25.4 bits (49), Expect(3) = 5e-004
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3 / +2
Query: 434 MPR*SDPAQC**PG*TDFH*LHP*K 360
+PR*SD Q P * + H HP*K
Sbjct: 37190 LPR*SDQVQYSEPD*IEIHSHHP*K 37264
Score = 24.0 bits (46), Expect(8) = 1e-034
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 48 RPPSFALIFISKLSRY 1
R +FALIF SKL RY
Sbjct: 37928 REITFALIFRSKLVRY 37975
Score = 22.6 bits (43), Expect(2) = 0.002
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 151 LSWMTM*NIHT*DDGGYLRH 92
LS +M*NIH D+G LR+
Sbjct: 37748 LSRRSM*NIHPKDNGWNLRN 37807
>ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 mRNA, complete cds
Length = 2553
Score = 161 bits (346), Expect(3) = 2e-093
Identities = 59/77 (76%), Positives = 67/77 (87%)
Frame = +2 / +1
Query: 485 QKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIG 664
Q NHHTKFFQT SP+NVLPGT++DS +CH N DFY+CAHAG IGTTRPTHYHVL+DEIG
Sbjct: 2119 QINHHTKFFQTESPNNVLPGTIIDSNICHQHNNDFYLCAHAGKIGTTRPTHYHVLYDEIG 2298
Query: 665 FSADEMQEFVHSLSYVY 715
F D++QE VHSLSYVY
Sbjct: 2299 FDTDQLQELVHSLSYVY 2349
Score = 135 bits (289), Expect(3) = 2e-093
Identities = 58/91 (63%), Positives = 71/91 (78%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVVSSR+WPLIS+YRA V TQS ++EM+ SLFKP DD I L+ + SS
Sbjct: 1849 PSIAAVVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDDQGIMRELLLDFHSSSG 2028
Query: 338 RKPEHIIIFRDGVSESQFTQVINIELDQIIE 430
+KP HIIIFRDGVSESQF QV+NIELDQ+++
Sbjct: 2029 KKPNHIIIFRDGVSESQFNQVLNIELDQMMQ 2121
Score = 88.1 bits (186), Expect(3) = 2e-093
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
YL NLL+KINAKLGGLNS+L +E S ++P V +VPTII+GMDVSHG PGQ
Sbjct: 1687 YLTNLLLKINAKLGGLNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQ 1836
Score = 80.8 bits (170), Expect(4) = 3e-044
Identities = 45/74 (60%), Positives = 47/74 (63%)
Frame = -2 / -2
Query: 711 T*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
T*DSE T+S S PISS T * VGLVVPI PA A *KS Q LLS VPGRT
Sbjct: 2345 T*DSECTSSWS*SVSNPISS*STW*CVGLVVPIFPA*AQR*KSLLCW*QMLLSIIVPGRT 2166
Query: 531 LSGDAV*KNLVWWF 490
L G +V KN VWWF
Sbjct: 2165 LLGLSVWKNFVWWF 2124
Score = 64.3 bits (134), Expect(2) = 3e-015
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
V + * M+K L L+C ++ LVV++M++ PC SN SM T +E+ V+ + + +++ S K
Sbjct: 2349 VDIG**MHKFLELICVKSNLVVEHMVMCWPCSSNLSSMSTKIEIVVVLVTDVAVNYCSWK 2170
Query: 535 NIVW*CRLKELGVVVLL 485
NI+ L+EL VVV L
Sbjct: 2169 NIIRAFGLEELRVVVYL 2119
Score = 62.5 bits (130), Expect(4) = 3e-044
Identities = 28/50 (56%), Positives = 31/50 (62%)
Frame = -2 / -2
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG P +TSIP MMVGT T GI D+S EF PPS A IF + RY
Sbjct: 1835 CPGEP*DTSIPIMMVGTLITRGIVPDSSISKTEFNPPSLAFIFSRRFVRY 1686
Score = 53.3 bits (110), Expect(4) = 2e-020
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1 / +3
Query: 583 RLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
R L +C+CW DWN KA+ L C+ RRD R C+F IL
Sbjct: 2217 RFLSLCSCWKDWNYKANTLPCALRRDWI*HRSTPRTCAFTIL 2342
Score = 49.2 bits (101), Expect(4) = 3e-044
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -2 / -2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
GL IIS+L D V T ALY EI GH ELTTAA +G+
Sbjct: 1961 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTAAMDGI 1845
Score = 44.6 bits (91), Expect(4) = 3e-044
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -2 / -2
Query: 426 MI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
+I*SSS+L TW+N* SLTPSLK+IM GF
Sbjct: 2117 II*SSSILRTWLN*DSLTPSLKMIM*FGF 2031
Score = 39.1 bits (79), Expect(4) = 2e-020
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1 / +3
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
+D+C+AWW E ++ N + S++HH GC +W
Sbjct: 1707 KDKCQAWWIEFSFGYGAVRNNASGNESSYHHYWNGCISW 1823
Score = 39.1 bits (79), Expect(2) = 3e-015
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -1 / -1
Query: 430 LDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
L LIQ N+ +L KL FTD+IPEN+ V F
Sbjct: 2121 LHHLIQFNIKNLVKLRFTDTIPENDNVIRF 2032
Score = 36.3 bits (73), Expect(4) = 2e-020
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 281 DDDGLIRESLIDFYTSSGKRKPEHII 358
DD G++RE L+DF++SSGK+ II
Sbjct: 1975 DDQGIMRELLLDFHSSSGKKPNHIII 2052
Score = 35.0 bits (70), Expect(4) = 2e-020
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 340 KTRTHNYFQGWSQ*KSVYPGHQH*AGSD 423
+T +H +FQGW Q* SV P +* GSD
Sbjct: 2031 ETESHYHFQGWCQ*ISV*PSS*Y*TGSD 2114
Score = 32.2 bits (64), Expect(3) = 0.002
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3 / -3
Query: 707 KIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSR 582
+I N Q L + SRR H + AL FQS QH H R+R
Sbjct: 2341 RIVNAQVLGVDLCQIQSRRRAHGNVLAL*FQSFQHEHKDRNR 2216
Score = 30.9 bits (61), Expect(3) = 0.002
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 422 SDPAQC**PG*TDFH*LHP*K*LC 351
SDP Q * G*T+ H* HP*K* C
Sbjct: 2113 SDPVQY*ELG*TEIH*HHP*K**C 2042
Score = 23.1 bits (44), Expect(3) = 0.002
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3 / -3
Query: 149 VLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQALH 30
V ++H HP+ *W L+ L +S HQA H
Sbjct: 1834 VQENHEIHPFQ**W*ELSLPEALFLTAPYPKLNSIHQAWH 1715
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 79.0 bits (166), Expect(7) = 3e-092
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2 / -2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GTTRPTHYHVL+DEIGFSADE+QE VHSLSYVY
Sbjct: 11544365 GTTRPTHYHVLYDEIGFSADELQELVHSLSYVY 11544267
Score = 76.2 bits (160), Expect(7) = 3e-092
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +2 / -3
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPG 544
+ACK LD W+PKF ++VAQKNHHTKFFQ SP+NV PG
Sbjct: 11544718 QACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPG 11544602
Score = 72.5 bits (152), Expect(7) = 3e-092
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +2 / -2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESL 310
VVSSR+WPLIS+YRASV TQ ++ EM+ SL K GT+DDG+I+ +L
Sbjct: 11545232 VVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKCAL 11545095
Score = 64.3 bits (134), Expect(7) = 3e-092
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +2 / -1
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
+LGGLNS+L VE + + +S+VPTIILGMDVSHG PGQ
Sbjct: 11545467 QLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQ 11545351
Score = 63.4 bits (132), Expect(7) = 2e-068
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = +2 / -2
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
LGG+NSLL +E S +IP ++++PT+ILGMDVSHG PG+
Sbjct: 13980911 LGGINSLLGIEYSYNIPLINKIPTLILGMDVSHGPPGR 13980798
Score = 62.9 bits (131), Expect(7) = 2e-068
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2 / -3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GT+RP HYHVL DEIGFS D++Q +HSLSYV
Sbjct: 13979773 GTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYV 13979678
Score = 62.5 bits (130), Expect(4) = 5e-023
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +2 / +2
Query: 359 IFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
++ DGVSE QF+QV+ E+ I +AC L E + P+ T ++ QK HHT+ F
Sbjct: 11882948 LYSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 11883100
Score = 60.2 bits (125), Expect(7) = 3e-092
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = +2 / -1
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GT++D+K+CHPKN DFY+CAHAGMI
Sbjct: 11544525 GTIIDNKICHPKNNDFYLCAHAGMI 11544451
Score = 59.3 bits (123), Expect(7) = 2e-068
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / -3
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDG 292
VV S+ WPLISRYRA+V TQS RLEM+ SLF+P + G
Sbjct: 13980676 VVGSKCWPLISRYRAAVRTQSPRLEMIDSLFQPIENTEKG 13980557
Score = 56.5 bits (117), Expect(7) = 2e-068
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2 / -2
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGMI 616
L GTVVD+K+ HP N+DFYMCAHAG I
Sbjct: 13979939 LSGTVVDTKIVHPTNYDFYMCAHAGKI 13979859
Score = 56.1 bits (116), Expect(7) = 2e-068
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +2 / -1
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPG 544
+A + L E PKFTVIVAQKNHHTK FQ P+NV G
Sbjct: 13980138 QAYQRLGESDVPKFTVIVAQKNHHTKLFQAKGPENVPAG 13980022
Score = 52.8 bits (109), Expect(3) = 1e-016
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = -2 / +2
Query: 546 VPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPS 367
+P T SG * NLVWWFF*AT+TVN G S R +A +* S + +LT
Sbjct: 13980020 LPAGTFSGPLA*NNLVWWFF*ATMTVNFGTSDSPRR*YACAM*KRSKTVK*YLHYNLTNR 13980199
Query: 366 LK 361
LK
Sbjct: 13980200 LK 13980205
Score = 52.4 bits (108), Expect(7) = 3e-092
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +2 / -3
Query: 299 RESLIDFYTSSGKRKPEHIIIFRDGVSE 382
RE L+DFYTSS KRKPEHIIIFR SE
Sbjct: 11545012 RELLVDFYTSSNKRKPEHIIIFRYVTSE 11544929
Score = 51.0 bits (105), Expect(4) = 5e-023
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2 / +2
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGM 613
L GTVVD+K+CHP FDFY+ +HAG+
Sbjct: 11883233 LSGTVVDTKICHPNEFDFYLNSHAGI 11883310
Score = 49.6 bits (102), Expect(4) = 5e-023
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE GF+AD++Q ++L Y
Sbjct: 11883400 GTSRPAHYHVLLDENGFTADQLQMLTNNLCY 11883492
Score = 48.3 bits (99), Expect(4) = 5e-023
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2 / +1
Query: 41 GGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRY 211
GG N++L +IP ++ PTII+G DV+H PG+D A V + IS Y
Sbjct: 11882377 GGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVCISYFTCISLY 11882547
Score = 48.3 bits (99), Expect(7) = 3e-092
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2 / -3
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQIIE
Sbjct: 11544862 RDGVSESQFNQVLNIELDQIIE 11544797
Score = 43.7 bits (89), Expect(5) = 1e-011
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*+SE T+S SSAEKPISS RT * VG VVP
Sbjct: 11544268 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVP 11544366
Score = 42.3 bits (86), Expect(5) = 1e-011
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2 / +2
Query: 186 RELTTAATEGLSCPG*PCETSIPKMMVGTCD 94
+ T A CPG PCETSIP++MVGT +
Sbjct: 11545316 KHFTAAMDGTSDCPGDPCETSIPRIMVGTLE 11545408
Score = 41.8 bits (85), Expect(7) = 2e-068
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2 / -1
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+ IE+DQII+
Sbjct: 13980303 RDGVSESQFEQVLKIEVDQIIK 13980238
Score = 40.5 bits (82), Expect(5) = 1e-011
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -2 / +1
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
L + IIS+L V TDALYL+I GH ELTT
Sbjct: 11545138 LTRDSIISALEGCVRTDALYLDISGHSLELTT 11545233
Score = 40.5 bits (82), Expect(5) = 1e-011
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -2 / +3
Query: 543 PGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
PG T SGD KNLV FF*AT N G F+S++L A
Sbjct: 11544603 PGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQA 11544716
Score = 40.0 bits (81), Expect = 0.080
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2 / +2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLI 313
VV+S WP I++YR V Q+ R E++ L+K GL+ LI
Sbjct: 11882591 VVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 11882731
Score = 37.3 bits (75), Expect = 0.54
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 463 QVHCDCCSKEPPHQVLSDGITRQCS 537
++HC C S+EPPHQV+S + +CS
Sbjct: 13980103 KIHCHCGSEEPPHQVVSS*GS*KCS 13980029
Score = 36.8 bits (74), Expect(3) = 1e-016
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -2 / +1
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVPGR 535
I PA AHM*KS F+G L+STTVP +
Sbjct: 13979860 IFPA*AHM*KS*FVGCTILVSTTVPDK 13979940
Score = 35.4 bits (71), Expect(3) = 1e-016
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*+ E C SS EKPISS T * GL VP
Sbjct: 13979676 YT*EREWMRFCKSSGEKPISSSNTW**AGLEVP 13979774
Score = 34.1 bits (68), Expect(2) = 4.5
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
G +E IIS D V T ALYLEI+G E TT
Sbjct: 13980579 GWKSESIISRRGD*VLTAALYLEIKGQHFEPTT 13980677
Score = 34.1 bits (68), Expect(5) = 1e-011
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1 / +2
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
+IPEN + WFSL RA VE+ Q P
Sbjct: 11544938 NIPENYDMLWFSLIRAGVEIYQQLP 11545012
Score = 32.7 bits (65), Expect(2) = 4.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2 / +1
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
PG P +TSIPK+ VG G+ + S + E PPS+
Sbjct: 13980802 PGGP*DTSIPKIKVGILFINGML*EYSIPNRELMPPSY 13980915
Score = 31.8 bits (63), Expect(7) = 2e-068
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 302 ESLIDFYTSSGKRKPEHIIIFR 367
E ++FY +S RKP+ IIIFR
Sbjct: 13980455 ELFVEFYRTSRARKPKQIIIFR 13980390
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
Length = 96102
Score = 79.4 bits (167), Expect(7) = 1e-078
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +2 / -3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVC 568
ACKFLD+K PKFT+I+AQ NHHTKFFQT SP+NVLPG + C
Sbjct: 84418 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPGKQLQIFFC 84281
Score = 70.7 bits (148), Expect(7) = 1e-078
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2 / -1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF D++QE VHSLSYV
Sbjct: 84063 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 83968
Score = 68.4 bits (143), Expect(7) = 1e-078
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +2 / -1
Query: 5 LLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
+L L+ I+ LGGLNS+L +E S ++P V +VPTII+GMDVSHG PGQ
Sbjct: 85203 IL*LISAISV*LGGLNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQ 85057
Score = 64.3 bits (134), Expect(5) = 3e-029
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2 / +3
Query: 567 QTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
Q + +PGRTL G +V KN VWWF *A I+VNLG +F S+NLHA
Sbjct: 84282 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 84419
Score = 64.3 bits (134), Expect(7) = 1e-078
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2 / -3
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
VVSSR+WPLIS+YRA V TQS ++EM+ SLFKP DD
Sbjct: 84949 VVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 84833
Score = 53.3 bits (110), Expect(5) = 3e-029
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -2 / +2
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
CPG P +TSIP MMVGT T GI D+S EF PPS+
Sbjct: 85058 CPGEP*DTSIPIMMVGTLITRGIVPDSSISKTEFNPPSY 85174
Score = 52.8 bits (109), Expect(7) = 1e-078
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2 / -3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYH 643
GT++DS +CH N DFY+CAHAG I + + +Y+
Sbjct: 84220 GTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 84119
Score = 44.1 bits (90), Expect(7) = 1e-078
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / -3
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 84580 RDGVSESQFNQVLNIELDQMMQ 84515
Score = 42.3 bits (86), Expect(5) = 3e-029
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAA 166
GL IIS+L D V T ALY EI GH ELTT A
Sbjct: 84852 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 84956
Score = 37.3 bits (75), Expect(5) = 3e-029
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -2 / +3
Query: 426 MI*SSSMLMTWVN*LSLTPSLKIIM 352
+I*SSS+L TW+N* SLTPSL +++
Sbjct: 84519 II*SSSILRTWLN*DSLTPSLHVLV 84593
Score = 37.3 bits (75), Expect(3) = 7e-008
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1 / +2
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
KNI+ L+EL VVV LS + +LG LLIQ+L CL
Sbjct: 84311 KNIIRAFGLEELRVVVYLSYDQCKLGILLLIQELACL 84421
Score = 36.3 bits (73), Expect(5) = 3e-029
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1 / +1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ * M+K L L+C ++ LVV++M++ PC S
Sbjct: 83965 LHIG**MHKFLELICVKSNLVVEHMVMCWPCSS 84063
Score = 36.3 bits (73), Expect(2) = 0.002
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -2 / +2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*DSE T+S S PISS T * VGLVVP
Sbjct: 83966 YT*DSECTSSWS*SVSNPISS*STW*CVGLVVP 84064
Score = 35.9 bits (72), Expect(2) = 0.002
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -3 / +1
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH RT CGG E S *TW TS P T MP
Sbjct: 84304 YLEEHY*GFRFGRTSCGGLSEL*SV*TWDLTSDPRTCMP 84420
Score = 34.5 bits (69), Expect(3) = 2e-007
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1 / -2
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSS 540
GM V G EV +QV+ D S +PPH+VL + CSS
Sbjct: 84419 GMQVLGSEVRSQVYTDHSSDKPPHEVLPNRKP**CSS 84309
Score = 33.6 bits (67), Expect(2) = 0.015
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1 / -3
Query: 31 CKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
C AWW E ++ N + S++HH GC +W
Sbjct: 85177 CIAWWIEFSFGYGAVRNNASGNESSYHHYWNGCISW 85070
Score = 32.2 bits (64), Expect(3) = 2e-007
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / -2
Query: 352 HNYFQGWSQ*KSVYPGHQH*AGSD 423
H Y QGW Q* SV P +* GSD
Sbjct: 84593 HQYMQGWCQ*ISV*PSS*Y*TGSD 84522
Score = 31.3 bits (62), Expect(3) = 7e-008
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 430 LDDLIQLNVDDLGKLTFTDSIP 365
L LIQ N+ +L KL FTD+IP
Sbjct: 84515 LHHLIQFNIKNLVKLRFTDTIP 84580
Score = 26.7 bits (52), Expect(3) = 2e-007
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 320 YTSSGKRKPEHIIIFR 367
+ SS +KP HIIIFR
Sbjct: 84702 FHSSSGKKPNHIIIFR 84655
Score = 26.7 bits (52), Expect(7) = 1e-078
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 299 RESLIDFYTSSGKRKPEHII 358
RE L+DF++SSGK+ II
Sbjct: 84720 RELLLDFHSSSGKKPNHIII 84661
Score = 26.3 bits (51), Expect(3) = 7e-008
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 648 RT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
R **++ L + I PA A *KS Q LLS VP
Sbjct: 84114 RA**YIYLSLTIFPA*AQR*KSLLCW*QMLLSIIVP 84221
Score = 26.3 bits (51), Expect(2) = 0.015
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / -3
Query: 2 YLLNLLMKINAKL 40
YL NLL+KINAK+
Sbjct: 85285 YLTNLLLKINAKV 85247
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
V, complete sequence
Length = 84413
Score = 84.5 bits (178), Expect(7) = 5e-077
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2 / -2
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTV 550
ACKFLD+ W PKFTVIVAQKNHHTKFFQ+ PDNV PG +
Sbjct: 12766 ACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 12647
Score = 79.4 bits (167), Expect(7) = 1e-078
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVC 568
ACKFLD+K PKFT+I+AQ NHHTKFFQT SP+NVLPG + C
Sbjct: 69296 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPGKQLQIFFC 69433
Score = 71.2 bits (149), Expect(7) = 5e-077
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2 / -2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF+ D++QE VHSLSYV
Sbjct: 12403 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 12308
Score = 70.7 bits (148), Expect(7) = 1e-078
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF D++QE VHSLSYV
Sbjct: 69651 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 69746
Score = 68.9 bits (144), Expect(7) = 5e-077
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2 / -1
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
LGGLNSLL +E S ++P V+QVPTII+GMDVSHG PGQ
Sbjct: 13592 LGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQ 13479
Score = 68.4 bits (143), Expect(7) = 1e-078
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +2 / +3
Query: 5 LLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
+L L+ I+ LGGLNS+L +E S ++P V +VPTII+GMDVSHG PGQ
Sbjct: 68511 IL*LISAISV*LGGLNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQ 68657
Score = 67.0 bits (140), Expect(7) = 5e-077
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ R
Sbjct: 13349 VVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 13221
Score = 67.0 bits (140), Expect(6) = 4e-032
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2 / +3
Query: 546 VPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
+PG TLSG KN VWWFF ATITVN G H SSRNLHA
Sbjct: 12651 LPGGTLSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHA 12767
Score = 64.3 bits (134), Expect(7) = 1e-078
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
VVSSR+WPLIS+YRA V TQS ++EM+ SLFKP DD
Sbjct: 68765 VVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 68881
Score = 64.3 bits (134), Expect(5) = 2e-029
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2 / -3
Query: 567 QTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
Q + +PGRTL G +V KN VWWF *A I+VNLG +F S+NLHA
Sbjct: 69432 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 69295
Score = 62.5 bits (130), Expect(7) = 5e-077
Identities = 19/25 (76%), Positives = 25/25 (100%)
Frame = +2 / -3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GT++DS++CHP+NFDFY+CAHAGMI
Sbjct: 12570 GTIIDSQICHPRNFDFYLCAHAGMI 12496
Score = 57.0 bits (118), Expect(6) = 4e-032
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
PG P +TSIP MMVGTC T GI + S +NEF PPS+
Sbjct: 13483 PGEPWDTSIPTMMVGTCVTFGIAGERSIANNEFNPPSY 13596
Score = 53.3 bits (110), Expect(5) = 2e-029
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -2 / -2
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
CPG P +TSIP MMVGT T GI D+S EF PPS+
Sbjct: 68656 CPGEP*DTSIPIMMVGTLITRGIVPDSSISKTEFNPPSY 68540
Score = 52.8 bits (109), Expect(7) = 1e-078
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYH 643
GT++DS +CH N DFY+CAHAG I + + +Y+
Sbjct: 69494 GTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 69595
Score = 44.1 bits (90), Expect(7) = 5e-077
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / -3
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 12945 RDGVSESQFNQVLNIELDQMMQ 12880
Score = 44.1 bits (90), Expect(7) = 5e-077
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / -2
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+DFY SS RKPEHIIIFR
Sbjct: 13090 RELLLDFYYSSENRKPEHIIIFR 13022
Score = 44.1 bits (90), Expect(7) = 1e-078
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / +2
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 69134 RDGVSESQFNQVLNIELDQMMQ 69199
Score = 42.8 bits (87), Expect(3) = 5e-008
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -1 / +2
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
+NI+ RL+EL VVVLL N H +L P +I+KL CL
Sbjct: 12659 RNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACL 12769
Score = 42.3 bits (86), Expect(5) = 2e-029
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -2 / -3
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAA 166
GL IIS+L D V T ALY EI GH ELTT A
Sbjct: 68862 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 68758
Score = 40.5 bits (82), Expect(6) = 4e-032
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*D E T+S SS PISS RT * VGLVVP
Sbjct: 12306 YT*DRECTSSWRSSVANPISSYRTW*CVGLVVP 12404
Score = 40.0 bits (81), Expect(3) = 5e-008
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ RM+K L +VC + LV+QNM++ PC S
Sbjct: 12305 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSS 12403
Score = 37.7 bits (76), Expect(6) = 4e-032
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -2 / +1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
GL IIS L D V T ALY E+ GH ELTT
Sbjct: 13252 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 13350
Score = 37.7 bits (76), Expect = 0.39
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -3 / +1
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH + + RT CGGS Q S *T T H ET MP
Sbjct: 12652 YLEEHYQGLETGRTLCGGSSGQLSL*TSDATYHQETCMP 12768
Score = 37.3 bits (75), Expect(5) = 2e-029
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -2 / -3
Query: 426 MI*SSSMLMTWVN*LSLTPSLKIIM 352
+I*SSS+L TW+N* SLTPSL +++
Sbjct: 69195 II*SSSILRTWLN*DSLTPSLHVLV 69121
Score = 37.3 bits (75), Expect(3) = 7e-008
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1 / -2
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
KNI+ L+EL VVV LS + +LG LLIQ+L CL
Sbjct: 69403 KNIIRAFGLEELRVVVYLSYDQCKLGILLLIQELACL 69293
Score = 36.3 bits (73), Expect(3) = 3e-005
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1 / -3
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E V + ++ N AS++HH GC W
Sbjct: 13593 AWWIEFVVSYGALTSNAKSNASSYHHCWDGCIPW 13492
Score = 36.3 bits (73), Expect(2) = 0.002
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ * M+K L L+C ++ LVV++M++ PC S
Sbjct: 69749 LHIG**MHKFLELICVKSNLVVEHMVMCWPCSS 69651
Score = 36.3 bits (73), Expect(5) = 2e-029
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*DSE T+S S PISS T * VGLVVP
Sbjct: 69748 YT*DSECTSSWS*SVSNPISS*STW*CVGLVVP 69650
Score = 35.9 bits (72), Expect(3) = 3e-005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVL 510
GM VS * V ++V+ D C +EPPH+VL
Sbjct: 12767 GMQVS**YVASEVYSDSCPEEPPHKVL 12687
Score = 35.9 bits (72), Expect(2) = 0.002
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -3 / -1
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH RT CGG E S *TW TS P T MP
Sbjct: 69410 YLEEHY*GFRFGRTSCGGLSEL*SV*TWDLTSDPRTCMP 69294
Score = 34.5 bits (69), Expect(6) = 6e-009
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSS 540
GM V G EV +QV+ D S +PPH+VL + CSS
Sbjct: 69295 GMQVLGSEVRSQVYTDHSSDKPPHEVLPNRKP**CSS 69405
Score = 33.6 bits (67), Expect(6) = 6e-009
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1 / +2
Query: 31 CKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
C AWW E ++ N + S++HH GC +W
Sbjct: 68537 CIAWWIEFSFGYGAVRNNASGNESSYHHYWNGCISW 68644
Score = 32.2 bits (64), Expect(6) = 6e-009
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / +1
Query: 352 HNYFQGWSQ*KSVYPGHQH*AGSD 423
H Y QGW Q* SV P +* GSD
Sbjct: 69121 HQYMQGWCQ*ISV*PSS*Y*TGSD 69192
Score = 31.8 bits (63), Expect(6) = 4e-032
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -2 / +2
Query: 438 LHASMI*SSSMLMTWVN*LSLTPSLKI 358
+H +I*S+S+L T +N* SLTPSL +
Sbjct: 12872 IHTCII*SNSILRT*LN*DSLTPSLHV 12952
Score = 31.3 bits (62), Expect(3) = 7e-008
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1 / -2
Query: 430 LDDLIQLNVDDLGKLTFTDSIP 365
L LIQ N+ +L KL FTD+IP
Sbjct: 69199 LHHLIQFNIKNLVKLRFTDTIP 69134
Score = 31.3 bits (62), Expect(6) = 4e-032
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / +2
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
SIPENN V WF + V+V Q FP
Sbjct: 13016 SIPENNDVLWFPIL*TVVKV*QEFP 13090
Score = 29.9 bits (59), Expect(3) = 3e-005
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1 / -1
Query: 619 NNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
N KA+ L CS RD RR C+F++L V
Sbjct: 12401 NYKANTLPCSV*RDWVCHRRPPRTCAFSVLCV 12306
Score = 29.5 bits (58), Expect(3) = 5e-008
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +3
Query: 366 LKIIMCSGFRFPELV*K 316
LKI+MCSGF F EL *K
Sbjct: 13023 LKIMMCSGFLFSEL**K 13073
Score = 28.6 bits (56), Expect(6) = 6e-009
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1 / +2
Query: 619 NNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
N KA+ L C+ RRD R C+F IL V
Sbjct: 69653 NYKANTLPCALRRDWI*HRSTPRTCAFTILCV 69748
Score = 26.7 bits (52), Expect(6) = 6e-009
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 320 YTSSGKRKPEHIIIFR 367
+ SS +KP HIIIFR
Sbjct: 69012 FHSSSGKKPNHIIIFR 69059
Score = 26.7 bits (52), Expect(7) = 1e-078
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 299 RESLIDFYTSSGKRKPEHII 358
RE L+DF++SSGK+ II
Sbjct: 68994 RELLLDFHSSSGKKPNHIII 69053
Score = 26.3 bits (51), Expect(6) = 6e-009
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKL 40
YL NLL+KINAK+
Sbjct: 68429 YLTNLLLKINAKV 68467
Score = 26.3 bits (51), Expect(3) = 7e-008
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 648 RT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
R **++ L + I PA A *KS Q LLS VP
Sbjct: 69600 RA**YIYLSLTIFPA*AQR*KSLLCW*QMLLSIIVP 69493
>emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS63ZA02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 838
Score = 294 bits (637), Expect = 2e-078
Identities = 113/138 (81%), Positives = 126/138 (91%)
Frame = +2 / +2
Query: 302 ESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIV 481
E L+DFYTSS KRKPEHIIIFRDGVSESQF QV+NIELDQIIEACK LD W+PKF ++V
Sbjct: 2 ELLVDFYTSSNKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLV 181
Query: 482 AQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEI 661
AQKNHHTKFFQ SP+NV PGT++D+K+CHPKN DFY+CAHAGMIGTTRPTHYHVL+DEI
Sbjct: 182 AQKNHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEI 361
Query: 662 GFSADEMQEFVHSLSYVY 715
GFSADE+QE VHSLSYVY
Sbjct: 362 GFSADELQELVHSLSYVY 415
Score = 152 bits (326), Expect = 1e-035
Identities = 86/133 (64%), Positives = 95/133 (71%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+S SSAEKPISS RT * VG VVPIIPA A *KS F G LLS VPG
Sbjct: 414 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILLSMIVPGG 235
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
T SGD KNLV FF*AT N G F+S++L ASMI*SSS+ T +N* SLTPSLKI+
Sbjct: 234 TFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLQASMI*SSSIFRT*LN*DSLTPSLKIM 55
Query: 354 MCSGFRFPELV*K 316
+CSGF ELV*K
Sbjct: 54 ICSGFLLFELV*K 16
Score = 117 bits (251), Expect = 3e-025
Identities = 56/136 (41%), Positives = 86/136 (63%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+ R++K L V +T L++Q+++V SNH S+ T VE+ VL + F ++ +
Sbjct: 415 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWR 236
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NI L+ELG+++LLS+ EL P+ + +L LDDLI+ N+ +L +L FT +IPEN
Sbjct: 235 NIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDLIKFNIQNLIELRFTHTIPENY 56
Query: 355 YVFWFSLSRASVEVDQ 308
+ WFSL RA VE+ Q
Sbjct: 55 DMLWFSLIRAGVEIYQ 8
Score = 49.6 bits (102), Expect(3) = 1e-010
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1 / +1
Query: 301 GITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM 435
G+ R LH L KTR ++ FQGW +* S+ G ++* SDHRG+
Sbjct: 1 GVAGRFLHQLE*EKTRAYHNFQGWCE*ISIQSGSEY*T*SDHRGL 135
Score = 47.8 bits (98), Expect = 4e-004
Identities = 29/75 (38%), Positives = 37/75 (49%)
Frame = -3 / -3
Query: 539 EEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K 360
EEH + RTW SFE ++ T + PR*SD Q P * + H HP*K
Sbjct: 239 EEHFQETLAGRTWYDDSFEPPTKGTLGSNLRLRACKPR*SDQVQYSEPD*IEIHSHHP*K 60
Query: 359 *LCVLVFAFQS*CRS 315
LVF++ S CR+
Sbjct: 59 L*YALVFSYSSWCRN 15
Score = 33.1 bits (66), Expect(3) = 1e-010
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / +1
Query: 589 LHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
L +C+ W+DWN + L D F R +G C A+L V
Sbjct: 289 LPLCSRWNDWNYPPNSLPRPV**DWFFS*RTSGTCPLALLCV 414
Score = 22.1 bits (42), Expect(3) = 1e-010
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 484 SKEPPHQVLSDGITRQCSS 540
SKE +QVL ++ +CSS
Sbjct: 184 SKESSYQVLPANVS*KCSS 240
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete
sequence
Length = 112600
Score = 84.5 bits (178), Expect(7) = 3e-076
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2 / -3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTV 550
ACKFLD+ W PKFTVIVAQKNHHTKFFQ+ PDNV PG +
Sbjct: 77681 ACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 77562
Score = 71.2 bits (149), Expect(7) = 3e-076
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2 / -3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF+ D++QE VHSLSYV
Sbjct: 77318 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 77223
Score = 68.9 bits (144), Expect(7) = 3e-076
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2 / -2
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
LGGLNSLL +E S ++P V+QVPTII+GMDVSHG PGQ
Sbjct: 78507 LGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQ 78394
Score = 67.0 bits (140), Expect(6) = 1e-031
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2 / +1
Query: 546 VPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
+PG TLSG KN VWWFF ATITVN G H SSRNLHA
Sbjct: 77566 LPGGTLSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHA 77682
Score = 67.0 bits (140), Expect(7) = 3e-076
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / -2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ R
Sbjct: 78264 VVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 78136
Score = 62.5 bits (130), Expect(7) = 3e-076
Identities = 19/25 (76%), Positives = 25/25 (100%)
Frame = +2 / -1
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GT++DS++CHP+NFDFY+CAHAGMI
Sbjct: 77485 GTIIDSQICHPRNFDFYLCAHAGMI 77411
Score = 57.0 bits (118), Expect(6) = 1e-031
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +2
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
PG P +TSIP MMVGTC T GI + S +NEF PPS+
Sbjct: 78398 PGEPWDTSIPTMMVGTCVTFGIAGERSIANNEFNPPSY 78511
Score = 44.1 bits (90), Expect(7) = 3e-076
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / -1
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 77860 RDGVSESQFNQVLNIELDQMMQ 77795
Score = 44.1 bits (90), Expect(7) = 3e-076
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / -3
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+DFY SS RKPEHIIIFR
Sbjct: 78005 RELLLDFYYSSENRKPEHIIIFR 77937
Score = 42.8 bits (87), Expect(3) = 8e-008
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -1 / +3
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
+NI+ RL+EL VVVLL N H +L P +I+KL CL
Sbjct: 77574 RNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACL 77684
Score = 40.5 bits (82), Expect(6) = 1e-031
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*D E T+S SS PISS RT * VGLVVP
Sbjct: 77221 YT*DRECTSSWRSSVANPISSYRTW*CVGLVVP 77319
Score = 40.0 bits (81), Expect(3) = 8e-008
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ RM+K L +VC + LV+QNM++ PC S
Sbjct: 77220 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSS 77318
Score = 37.7 bits (76), Expect(6) = 1e-031
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -2 / +2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
GL IIS L D V T ALY E+ GH ELTT
Sbjct: 78167 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 78265
Score = 37.7 bits (76), Expect = 0.39
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -3 / +2
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH + + RT CGGS Q S *T T H ET MP
Sbjct: 77567 YLEEHYQGLETGRTLCGGSSGQLSL*TSDATYHQETCMP 77683
Score = 36.3 bits (73), Expect(3) = 5e-005
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1 / -1
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E V + ++ N AS++HH GC W
Sbjct: 78508 AWWIEFVVSYGALTSNAKSNASSYHHCWDGCIPW 78407
Score = 35.9 bits (72), Expect(3) = 5e-005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVL 510
GM VS * V ++V+ D C +EPPH+VL
Sbjct: 77682 GMQVS**YVASEVYSDSCPEEPPHKVL 77602
Score = 31.8 bits (63), Expect(6) = 1e-031
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -2 / +3
Query: 438 LHASMI*SSSMLMTWVN*LSLTPSLKI 358
+H +I*S+S+L T +N* SLTPSL +
Sbjct: 77787 IHTCII*SNSILRT*LN*DSLTPSLHV 77867
Score = 31.3 bits (62), Expect(6) = 1e-031
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / +3
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
SIPENN V WF + V+V Q FP
Sbjct: 77931 SIPENNDVLWFPIL*TVVKV*QEFP 78005
Score = 29.9 bits (59), Expect(3) = 5e-005
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1 / -2
Query: 619 NNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
N KA+ L CS RD RR C+F++L V
Sbjct: 77316 NYKANTLPCSV*RDWVCHRRPPRTCAFSVLCV 77221
Score = 29.5 bits (58), Expect(3) = 8e-008
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 366 LKIIMCSGFRFPELV*K 316
LKI+MCSGF F EL *K
Sbjct: 77938 LKIMMCSGFLFSEL**K 77988
>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete
sequence
Length = 96801
Score = 63.4 bits (132), Expect(7) = 2e-068
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = +2 / +1
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
LGG+NSLL +E S +IP ++++PT+ILGMDVSHG PG+
Sbjct: 49651 LGGINSLLGIEYSYNIPLINKIPTLILGMDVSHGPPGR 49764
Score = 62.9 bits (131), Expect(7) = 2e-068
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2 / +2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GT+RP HYHVL DEIGFS D++Q +HSLSYV
Sbjct: 50789 GTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYV 50884
Score = 59.3 bits (123), Expect(7) = 2e-068
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDG 292
VV S+ WPLISRYRA+V TQS RLEM+ SLF+P + G
Sbjct: 49886 VVGSKCWPLISRYRAAVRTQSPRLEMIDSLFQPIENTEKG 50005
Score = 56.5 bits (117), Expect(7) = 2e-068
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2 / +1
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGMI 616
L GTVVD+K+ HP N+DFYMCAHAG I
Sbjct: 50623 LSGTVVDTKIVHPTNYDFYMCAHAGKI 50703
Score = 56.1 bits (116), Expect(7) = 2e-068
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +2 / +3
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPG 544
+A + L E PKFTVIVAQKNHHTK FQ P+NV G
Sbjct: 50424 QAYQRLGESDVPKFTVIVAQKNHHTKLFQAKGPENVPAG 50540
Score = 52.8 bits (109), Expect(5) = 2e-017
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = -2 / -3
Query: 546 VPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPS 367
+P T SG * NLVWWFF*AT+TVN G S R +A +* S + +LT
Sbjct: 50542 LPAGTFSGPLA*NNLVWWFF*ATMTVNFGTSDSPRR*YACAM*KRSKTVK*YLHYNLTNR 50363
Query: 366 LK 361
LK
Sbjct: 50362 LK 50357
Score = 41.8 bits (85), Expect(7) = 2e-068
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+ IE+DQII+
Sbjct: 50259 RDGVSESQFEQVLKIEVDQIIK 50324
Score = 37.3 bits (75), Expect(2) = 0.008
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1 / +2
Query: 463 QVHCDCCSKEPPHQVLSDGITRQCS 537
++HC C S+EPPHQV+S + +CS
Sbjct: 50459 KIHCHCGSEEPPHQVVSS*GS*KCS 50533
Score = 36.8 bits (74), Expect(5) = 2e-017
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -2 / -2
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVPGR 535
I PA AHM*KS F+G L+STTVP +
Sbjct: 50702 IFPA*AHM*KS*FVGCTILVSTTVPDK 50622
Score = 35.4 bits (71), Expect(5) = 2e-017
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*+ E C SS EKPISS T * GL VP
Sbjct: 50886 YT*EREWMRFCKSSGEKPISSSNTW**AGLEVP 50788
Score = 34.1 bits (68), Expect(5) = 2e-017
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2 / -1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
G +E IIS D V T ALYLEI+G E TT
Sbjct: 49983 GWKSESIISRRGD*VLTAALYLEIKGQHFEPTT 49885
Score = 32.7 bits (65), Expect(5) = 2e-017
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2 / -2
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
PG P +TSIPK+ VG G+ + S + E PPS+
Sbjct: 49760 PGGP*DTSIPKIKVGILFINGML*EYSIPNRELMPPSY 49647
Score = 32.2 bits (64), Expect(2) = 1.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1 / -1
Query: 148 SWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQI 11
+W M IHT + GG + W R QQR+ +KL D +++
Sbjct: 49761 TWRPMRYIHTQNQGGNFVYQWNVVRVLYSQQRIDASKLY*DGRKEV 49624
Score = 31.8 bits (63), Expect(7) = 2e-068
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 302 ESLIDFYTSSGKRKPEHIIIFR 367
E ++FY +S RKP+ IIIFR
Sbjct: 50107 ELFVEFYRTSRARKPKQIIIFR 50172
Score = 31.3 bits (62), Expect(2) = 0.29
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -1 / -2
Query: 538 KNIVW*CRLKELGVVVLLSNNHSE 467
+NI LK+LGVVVLLS+N SE
Sbjct: 50534 RNIFRTLSLKQLGVVVLLSHNDSE 50463
Score = 29.9 bits (59), Expect(2) = 1.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3 / -1
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ +EH E TWCGGS E Q Q* H + P
Sbjct: 50541 YLQEHFQDP*LETTWCGGSSEPQ*Q*ILAHQIHQDVDTP 50425
Score = 24.0 bits (46), Expect(2) = 0.29
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3 / -3
Query: 605 HVHTCRSRSS*DGKLYYPPQF 543
H HTC++RS + + P QF
Sbjct: 50692 HEHTCKNRSLSGVRSWCPRQF 50630
Score = 23.5 bits (45), Expect(2) = 0.008
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 577 ELRLLHVCTC 606
+LR LHVC+C
Sbjct: 50664 KLRFLHVCSC 50693
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 84.5 bits (178), Expect(7) = 2e-062
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2 / +3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTV 550
ACKFLD+ W PKFTVIVAQKNHHTKFFQ+ PDNV PG +
Sbjct: 7197258 ACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPDNVPPGKI 7197377
Score = 79.4 bits (167), Expect(6) = 3e-053
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +2 / -2
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVC 568
ACKFLD+K PKFT+I+AQ NHHTKFFQT SP+NVLPG + C
Sbjct: 7140728 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPGKQLQIFFC 7140591
Score = 71.2 bits (149), Expect(7) = 2e-062
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF+ D++QE VHSLSYV
Sbjct: 7197621 GTTRPTHYHVLYDEIGFATDDLQELVHSLSYV 7197716
Score = 70.7 bits (148), Expect(6) = 3e-053
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2 / -3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF D++QE VHSLSYV
Sbjct: 7140373 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 7140278
Score = 68.9 bits (144), Expect(7) = 2e-062
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2 / +2
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
LGGLNSLL +E S ++P V+QVPTII+GMDVSHG PGQ
Sbjct: 7196432 LGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQ 7196545
Score = 68.4 bits (143), Expect(6) = 3e-053
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +2 / -3
Query: 5 LLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
+L L+ I+ LGGLNS+L +E S ++P V +VPTII+GMDVSHG PGQ
Sbjct: 7141513 IL*LISAISV*LGGLNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQ 7141367
Score = 67.0 bits (140), Expect(4) = 5e-020
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2 / -3
Query: 546 VPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
+PG TLSG KN VWWFF ATITVN G H SSRNLHA
Sbjct: 7197373 LPGGTLSGPRDWKNFVWWFFWATITVNFGCHVSSRNLHA 7197257
Score = 67.0 bits (140), Expect(7) = 2e-062
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / +2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ R
Sbjct: 7196675 VVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 7196803
Score = 64.3 bits (134), Expect(6) = 3e-053
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2 / -2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
VVSSR+WPLIS+YRA V TQS ++EM+ SLFKP DD
Sbjct: 7141259 VVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 7141143
Score = 64.3 bits (134), Expect(5) = 4e-020
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2 / +1
Query: 567 QTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
Q + +PGRTL G +V KN VWWF *A I+VNLG +F S+NLHA
Sbjct: 7140592 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 7140729
Score = 62.5 bits (130), Expect(7) = 2e-062
Identities = 19/25 (76%), Positives = 25/25 (100%)
Frame = +2 / +1
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GT++DS++CHP+NFDFY+CAHAGMI
Sbjct: 7197454 GTIIDSQICHPRNFDFYLCAHAGMI 7197528
Score = 57.4 bits (119), Expect(4) = 7e-026
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2 / +2
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGM 613
TAS + GTVVD+K+CHP FDFY+C+HAG+
Sbjct: 17633189 TASLPPFVSGTVVDTKICHPTEFDFYLCSHAGI 17633287
Score = 57.0 bits (118), Expect(4) = 5e-020
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
PG P +TSIP MMVGTC T GI + S +NEF PPS+
Sbjct: 7196541 PGEPWDTSIPTMMVGTCVTFGIAGERSIANNEFNPPSY 7196428
Score = 53.3 bits (110), Expect(5) = 4e-020
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -2 / +3
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
CPG P +TSIP MMVGT T GI D+S EF PPS+
Sbjct: 7141368 CPGEP*DTSIPIMMVGTLITRGIVPDSSISKTEFNPPSY 7141484
Score = 52.8 bits (109), Expect(6) = 3e-053
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2 / -2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYH 643
GT++DS +CH N DFY+CAHAG I + + +Y+
Sbjct: 7140530 GTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 7140429
Score = 49.6 bits (102), Expect(4) = 7e-026
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2 / +1
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+C + GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 17633359 VCVCCMI*GTSRPAHYHVLWDENNFTADGIQSLTNNLCYTY 17633481
Score = 46.4 bits (95), Expect = 0.001
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRYR 214
++GG N++L S IP VS +PTII G DV+H G++ A V + + +R
Sbjct: 17632254 QMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVRIIHFYQVVEHR 17632433
Query: 215 ASVHT 229
S+++
Sbjct: 17632434 NSLYS 17632448
Score = 44.1 bits (90), Expect(6) = 3e-053
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / -2
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 7140890 RDGVSESQFNQVLNIELDQMMQ 7140825
Score = 44.1 bits (90), Expect(7) = 2e-062
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / +1
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 7197079 RDGVSESQFNQVLNIELDQMMQ 7197144
Score = 44.1 bits (90), Expect(7) = 2e-062
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+DFY SS RKPEHIIIFR
Sbjct: 7196934 RELLLDFYYSSENRKPEHIIIFR 7197002
Score = 42.8 bits (87), Expect(3) = 4e-011
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -1 / -2
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
+NI+ RL+EL VVVLL N H +L P +I+KL CL
Sbjct: 7197365 RNIIRASRLEELCVVVLLGNYHCKLRMPRIIKKLACL 7197255
Score = 42.3 bits (86), Expect(5) = 4e-020
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -2 / +1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAA 166
GL IIS+L D V T ALY EI GH ELTT A
Sbjct: 7141162 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 7141266
Score = 40.5 bits (82), Expect(4) = 5e-020
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*D E T+S SS PISS RT * VGLVVP
Sbjct: 7197718 YT*DRECTSSWRSSVANPISSYRTW*CVGLVVP 7197620
Score = 40.0 bits (81), Expect(2) = 0.007
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ RM+K L +VC + LV+QNM++ PC S
Sbjct: 7197719 LHIGQRMHKFLEVVCGKPNLVIQNMVMCWPCSS 7197621
Score = 37.7 bits (76), Expect(4) = 5e-020
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -2 / -1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
GL IIS L D V T ALY E+ GH ELTT
Sbjct: 7196772 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 7196674
Score = 37.7 bits (76), Expect(2) = 0.007
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -3 / -1
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH + + RT CGGS Q S *T T H ET MP
Sbjct: 7197372 YLEEHYQGLETGRTLCGGSSGQLSL*TSDATYHQETCMP 7197256
Score = 37.3 bits (75), Expect(5) = 4e-020
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -2 / +1
Query: 426 MI*SSSMLMTWVN*LSLTPSLKIIM 352
+I*SSS+L TW+N* SLTPSL +++
Sbjct: 7140829 II*SSSILRTWLN*DSLTPSLHVLV 7140903
Score = 37.3 bits (75), Expect(2) = 4e-005
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1 / +3
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
KNI+ L+EL VVV LS + +LG LLIQ+L CL
Sbjct: 7140621 KNIIRAFGLEELRVVVYLSYDQCKLGILLLIQELACL 7140731
Score = 36.3 bits (73), Expect(4) = 7e-026
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P T IV QK HHT+ F
Sbjct: 17632994 ACASLEPNYQPPVTFIVVQKRHHTRLF 17633074
Score = 36.3 bits (73), Expect(2) = 0.22
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1 / +1
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E V + ++ N AS++HH GC W
Sbjct: 7196431 AWWIEFVVSYGALTSNAKSNASSYHHCWDGCIPW 7196532
Score = 36.3 bits (73), Expect(5) = 4e-020
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ * M+K L L+C ++ LVV++M++ PC S
Sbjct: 7140275 LHIG**MHKFLELICVKSNLVVEHMVMCWPCSS 7140373
Score = 36.3 bits (73), Expect(2) = 0.22
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*DSE T+S S PISS T * VGLVVP
Sbjct: 7140276 YT*DSECTSSWS*SVSNPISS*STW*CVGLVVP 7140374
Score = 35.9 bits (72), Expect(2) = 0.22
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / +2
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVL 510
GM VS * V ++V+ D C +EPPH+VL
Sbjct: 7197257 GMQVS**YVASEVYSDSCPEEPPHKVL 7197337
Score = 35.9 bits (72), Expect(2) = 0.22
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -3 / +2
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH RT CGG E S *TW TS P T MP
Sbjct: 7140614 YLEEHY*GFRFGRTSCGGLSEL*SV*TWDLTSDPRTCMP 7140730
Score = 34.5 bits (69), Expect(2) = 1e-004
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1 / -1
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSS 540
GM V G EV +QV+ D S +PPH+VL + CSS
Sbjct: 7140729 GMQVLGSEVRSQVYTDHSSDKPPHEVLPNRKP**CSS 7140619
Score = 33.6 bits (67), Expect = 6.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1 / -2
Query: 31 CKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
C AWW E ++ N + S++HH GC +W
Sbjct: 7141487 CIAWWIEFSFGYGAVRNNASGNESSYHHYWNGCISW 7141380
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -3
Query: 631 GPCCSNHPSMCTHVEVEVLRMANFTIHHS 545
GP S + + THV+ LR+A +IHHS
Sbjct: 21212533 GPVSSGNHKLTTHVQCTQLRIAALSIHHS 21212447
Score = 32.2 bits (64), Expect(2) = 1e-004
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / -1
Query: 352 HNYFQGWSQ*KSVYPGHQH*AGSD 423
H Y QGW Q* SV P +* GSD
Sbjct: 7140903 HQYMQGWCQ*ISV*PSS*Y*TGSD 7140832
Score = 31.8 bits (63), Expect(3) = 4e-011
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -2 / -2
Query: 438 LHASMI*SSSMLMTWVN*LSLTPSLKI 358
+H +I*S+S+L T +N* SLTPSL +
Sbjct: 7197152 IHTCII*SNSILRT*LN*DSLTPSLHV 7197072
Score = 31.3 bits (62), Expect(3) = 4e-011
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / -2
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
SIPENN V WF + V+V Q FP
Sbjct: 7197008 SIPENNDVLWFPIL*TVVKV*QEFP 7196934
Score = 31.3 bits (62), Expect(2) = 4e-005
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1 / +3
Query: 430 LDDLIQLNVDDLGKLTFTDSIP 365
L LIQ N+ +L KL FTD+IP
Sbjct: 7140825 LHHLIQFNIKNLVKLRFTDTIP 7140890
Score = 30.4 bits (60), Expect(4) = 7e-026
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 368 DGVSESQFTQVINIELDQIIEACKFL 445
DGVSE QF QV+ ELD I + F+
Sbjct: 17632841 DGVSEGQFYQVLLYELDAIRKVKTFV 17632918
>ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G27880 mRNA, complete cds
Length = 2994
Score = 105 bits (223), Expect(4) = 5e-059
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +2 / +1
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+ PGTVVD+K+CHP FDFY+ +HAG+ GT+RP HYHVL DE GF+AD++Q
Sbjct: 2590 TDKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLT 2769
Query: 695 HSLSYVY 715
++L Y Y
Sbjct: 2770 NNLCYTY 2790
Score = 72.1 bits (151), Expect(4) = 5e-059
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +2 / +1
Query: 344 PEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
P+ II +RDGVSE QF+QV+ E+ I +AC L E + P+ T ++ QK HHT+ F
Sbjct: 2395 PQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 2562
Score = 60.2 bits (125), Expect(4) = 5e-059
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
Y+ N+ +KIN K GG N++L +IP ++ PTII+G DV+H PG+D A V
Sbjct: 2038 YMENVALKINVKTGGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAV 2214
Score = 51.5 bits (106), Expect(3) = 4e-010
Identities = 29/49 (59%), Positives = 31/49 (63%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA KP SS T * GL+VP IPA *KS LG Q L+STTVPG
Sbjct: 2759 CN*SAVKPFSSRSTW*CAGLLVP*IPAWLFK*KSNSLG*QILVSTTVPG 2613
Score = 50.1 bits (103), Expect(4) = 5e-059
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLI 313
PS+AAVV+S WP I++YR V Q+ R E++ L+K GL+ LI
Sbjct: 2197 PSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 2352
Score = 50.1 bits (103), Expect = 7e-005
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ ET L+ + M++ P CS + SM +EVE +R+ +F++H S+ NI
Sbjct: 2760 LQLISGETVLIEKYMVMCRPACSLNTSMAVQIEVEFIRVTDFSVHDSTWLNI 2605
Score = 35.9 bits (72), Expect = 1.4
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1 / +3
Query: 529 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRF 666
Q S+ C G *+L * +RLL CW N +A L C++R +RF
Sbjct: 2604 QYSTRYCRGH*NLSP**IRLLFEQPCWYSGNKQAGTLPCTSR*ERF 2741
Score = 30.4 bits (60), Expect(3) = 4e-010
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = -2 / -2
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS P MMVG G+ ++ F PP LIF + S Y
Sbjct: 2189 SSPGCG*VTSAPMMMVGRSVIRGMFLLIASLRTVFLPPVLTLIFKATFSMY 2037
Score = 28.1 bits (55), Expect(3) = 4e-010
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = -2 / -2
Query: 252 IISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
IISSL T+ YL I G E TTAA EGL
Sbjct: 2291 IISSL*A*AETNPRYLFISGQSIEATTAAIEGL 2193
>ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.2 mRNA, complete cds
Length = 3489
Score = 110 bits (235), Expect(3) = 7e-055
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 2877 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3056
Query: 710 VY 715
Y
Sbjct: 3057 TY 3062
Score = 76.2 bits (160), Expect(3) = 7e-055
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + S KP II +RDGVSE QF
Sbjct: 2538 AQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFY 2717
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 2718 QVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 2834
Score = 68.4 bits (143), Expect(3) = 7e-055
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 2310 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 2489
Query: 182 SRQ 190
+ Q
Sbjct: 2490 ASQ 2498
Score = 48.3 bits (99), Expect(2) = 1e-005
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G++ +I + +
Sbjct: 2469 PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFR 2648
Query: 338 RKPEH 352
R H
Sbjct: 2649 RSTGH 2663
Score = 48.3 bits (99), Expect(3) = 3e-014
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 2461 SSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 2309
Score = 47.8 bits (98), Expect(3) = 3e-014
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -3
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 3022 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 2882
Score = 29.0 bits (57), Expect(3) = 3e-014
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1 / -2
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
K+ V+ LL ++ Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 2834 KQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 2664
Score = 27.2 bits (53), Expect(2) = 1e-005
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3 / +1
Query: 531 MFFLELWWIVKFAILRTSTSTCVHML 608
+F+L L W +K A L++ T T V ML
Sbjct: 2878 IFYLALLWTLKSATLQSLTFTSVVML 2955
>ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.1 mRNA, complete cds
Length = 3483
Score = 110 bits (235), Expect(3) = 7e-055
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 2871 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3050
Query: 710 VY 715
Y
Sbjct: 3051 TY 3056
Score = 76.2 bits (160), Expect(3) = 7e-055
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + S KP II +RDGVSE QF
Sbjct: 2532 AQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFY 2711
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 2712 QVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 2828
Score = 68.4 bits (143), Expect(3) = 7e-055
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 2304 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 2483
Query: 182 SRQ 190
+ Q
Sbjct: 2484 ASQ 2492
Score = 48.3 bits (99), Expect(2) = 1e-005
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G++ +I + +
Sbjct: 2463 PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFR 2642
Query: 338 RKPEH 352
R H
Sbjct: 2643 RSTGH 2657
Score = 48.3 bits (99), Expect(3) = 3e-014
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 2455 SSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 2303
Score = 47.8 bits (98), Expect(3) = 3e-014
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -3
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 3016 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 2876
Score = 29.0 bits (57), Expect(3) = 3e-014
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1 / -2
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
K+ V+ LL ++ Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 2828 KQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 2658
Score = 27.2 bits (53), Expect(2) = 1e-005
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3 / +1
Query: 531 MFFLELWWIVKFAILRTSTSTCVHML 608
+F+L L W +K A L++ T T V ML
Sbjct: 2872 IFYLALLWTLKSATLQSLTFTSVVML 2949
>gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein (AGO1) mRNA, complete cds
Length = 3473
Score = 110 bits (235), Expect(3) = 7e-055
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 2848 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 3027
Query: 710 VY 715
Y
Sbjct: 3028 TY 3033
Score = 76.2 bits (160), Expect(3) = 7e-055
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + S KP II +RDGVSE QF
Sbjct: 2509 AQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFY 2688
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 2689 QVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 2805
Score = 68.4 bits (143), Expect(3) = 7e-055
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 2281 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 2460
Query: 182 SRQ 190
+ Q
Sbjct: 2461 ASQ 2469
Score = 48.3 bits (99), Expect(2) = 1e-005
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G++ +I + +
Sbjct: 2440 PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFR 2619
Query: 338 RKPEH 352
R H
Sbjct: 2620 RSTGH 2634
Score = 48.3 bits (99), Expect(3) = 3e-014
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 2432 SSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 2280
Score = 47.8 bits (98), Expect(3) = 3e-014
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -1
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 2993 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 2853
Score = 29.0 bits (57), Expect(3) = 3e-014
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1 / -3
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
K+ V+ LL ++ Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 2805 KQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 2635
Score = 27.2 bits (53), Expect(2) = 1e-005
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 531 MFFLELWWIVKFAILRTSTSTCVHML 608
+F+L L W +K A L++ T T V ML
Sbjct: 2849 IFYLALLWTLKSATLQSLTFTSVVML 2926
>gb|BT000941.1| Arabidopsis thaliana clone C105223 putative leaf development protein
Argonaute (At1g48410) mRNA, complete cds
Length = 3177
Score = 110 bits (235), Expect(3) = 7e-055
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 2722 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2901
Query: 710 VY 715
Y
Sbjct: 2902 TY 2907
Score = 76.2 bits (160), Expect(3) = 7e-055
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + S KP II +RDGVSE QF
Sbjct: 2383 AQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFY 2562
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 2563 QVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 2679
Score = 68.4 bits (143), Expect(3) = 7e-055
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 2155 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 2334
Query: 182 SRQ 190
+ Q
Sbjct: 2335 ASQ 2343
Score = 48.3 bits (99), Expect(2) = 9e-006
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G++ +I + +
Sbjct: 2314 PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFR 2493
Query: 338 RKPEH 352
R H
Sbjct: 2494 RSTGH 2508
Score = 48.3 bits (99), Expect(3) = 2e-014
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = -2 / -2
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 2306 SSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 2154
Score = 47.8 bits (98), Expect(3) = 2e-014
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -2
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 2867 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 2727
Score = 29.0 bits (57), Expect(3) = 2e-014
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1 / -1
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
K+ V+ LL ++ Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 2679 KQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 2509
Score = 27.2 bits (53), Expect(2) = 9e-006
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 531 MFFLELWWIVKFAILRTSTSTCVHML 608
+F+L L W +K A L++ T T V ML
Sbjct: 2723 IFYLALLWTLKSATLQSLTFTSVVML 2800
>gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence
Length = 2764
Score = 110 bits (235), Expect(3) = 7e-055
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 2120 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2299
Query: 710 VY 715
Y
Sbjct: 2300 TY 2305
Score = 76.2 bits (160), Expect(3) = 7e-055
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + S KP II +RDGVSE QF
Sbjct: 1781 AQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFY 1960
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 1961 QVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 2077
Score = 68.4 bits (143), Expect(3) = 7e-055
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 1553 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 1732
Query: 182 SRQ 190
+ Q
Sbjct: 1733 ASQ 1741
Score = 48.3 bits (99), Expect(2) = 8e-006
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G++ +I + +
Sbjct: 1712 PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFR 1891
Query: 338 RKPEH 352
R H
Sbjct: 1892 RSTGH 1906
Score = 48.3 bits (99), Expect(3) = 2e-014
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = -2 / -2
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 1704 SSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 1552
Score = 47.8 bits (98), Expect(3) = 2e-014
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -2
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 2265 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 2125
Score = 29.0 bits (57), Expect(3) = 2e-014
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1 / -1
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
K+ V+ LL ++ Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 2077 KQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 1907
Score = 27.2 bits (53), Expect(2) = 8e-006
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3 / +3
Query: 531 MFFLELWWIVKFAILRTSTSTCVHML 608
+F+L L W +K A L++ T T V ML
Sbjct: 2121 IFYLALLWTLKSATLQSLTFTSVVML 2198
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 79.4 bits (167), Expect(6) = 2e-053
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +2 / -1
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVC 568
ACKFLD+K PKFT+I+AQ NHHTKFFQT SP+NVLPG + C
Sbjct: 6853258 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPGKQLQIFFC 6853121
Score = 79.4 bits (167), Expect(6) = 2e-053
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVC 568
ACKFLD+K PKFT+I+AQ NHHTKFFQT SP+NVLPG + C
Sbjct: 6907436 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPGKQLQIFFC 6907573
Score = 70.7 bits (148), Expect(6) = 2e-053
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2 / -2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF D++QE VHSLSYV
Sbjct: 6852903 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 6852808
Score = 70.7 bits (148), Expect(6) = 2e-053
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF D++QE VHSLSYV
Sbjct: 6907791 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 6907886
Score = 68.4 bits (143), Expect(6) = 2e-053
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +2 / -2
Query: 5 LLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
+L L+ I+ LGGLNS+L +E S ++P V +VPTII+GMDVSHG PGQ
Sbjct: 6854043 IL*LISAISV*LGGLNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQ 6853897
Score = 68.4 bits (143), Expect(6) = 2e-053
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +2 / +3
Query: 5 LLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
+L L+ I+ LGGLNS+L +E S ++P V +VPTII+GMDVSHG PGQ
Sbjct: 6906651 IL*LISAISV*LGGLNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQ 6906797
Score = 64.3 bits (134), Expect(6) = 2e-053
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
VVSSR+WPLIS+YRA V TQS ++EM+ SLFKP DD
Sbjct: 6853789 VVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 6853673
Score = 64.3 bits (134), Expect(5) = 2e-020
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2 / -2
Query: 567 QTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
Q + +PGRTL G +V KN VWWF *A I+VNLG +F S+NLHA
Sbjct: 6907572 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 6907435
Score = 64.3 bits (134), Expect(6) = 2e-053
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
VVSSR+WPLIS+YRA V TQS ++EM+ SLFKP DD
Sbjct: 6906905 VVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 6907021
Score = 64.3 bits (134), Expect(5) = 2e-020
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2 / +3
Query: 567 QTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
Q + +PGRTL G +V KN VWWF *A I+VNLG +F S+NLHA
Sbjct: 6853122 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 6853259
Score = 57.4 bits (119), Expect(4) = 7e-026
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2 / +1
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGM 613
TAS + GTVVD+K+CHP FDFY+C+HAG+
Sbjct: 16028683 TASLPPFVSGTVVDTKICHPTEFDFYLCSHAGI 16028781
Score = 53.3 bits (110), Expect(5) = 2e-020
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -2 / -1
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
CPG P +TSIP MMVGT T GI D+S EF PPS+
Sbjct: 6906796 CPGEP*DTSIPIMMVGTLITRGIVPDSSISKTEFNPPSY 6906680
Score = 53.3 bits (110), Expect(5) = 2e-020
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -2 / +2
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
CPG P +TSIP MMVGT T GI D+S EF PPS+
Sbjct: 6853898 CPGEP*DTSIPIMMVGTLITRGIVPDSSISKTEFNPPSY 6854014
Score = 52.8 bits (109), Expect(6) = 2e-053
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2 / -1
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYH 643
GT++DS +CH N DFY+CAHAG I + + +Y+
Sbjct: 6853060 GTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 6852959
Score = 52.8 bits (109), Expect(6) = 2e-053
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYH 643
GT++DS +CH N DFY+CAHAG I + + +Y+
Sbjct: 6907634 GTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 6907735
Score = 49.6 bits (102), Expect(4) = 7e-026
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2 / +3
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+C + GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 16028853 VCVCCMI*GTSRPAHYHVLWDENNFTADGIQSLTNNLCYTY 16028975
Score = 46.4 bits (95), Expect = 0.001
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +2 / +2
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRYR 214
++GG N++L S IP VS +PTII G DV+H G++ A V + + +R
Sbjct: 16027748 QMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVRIIHFYQVVEHR 16027927
Query: 215 ASVHT 229
S+++
Sbjct: 16027928 NSLYS 16027942
Score = 44.1 bits (90), Expect(6) = 2e-053
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / -1
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 6853420 RDGVSESQFNQVLNIELDQMMQ 6853355
Score = 44.1 bits (90), Expect(6) = 2e-053
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / +2
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 6907274 RDGVSESQFNQVLNIELDQMMQ 6907339
Score = 42.3 bits (86), Expect(5) = 2e-020
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -2 / -2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAA 166
GL IIS+L D V T ALY EI GH ELTT A
Sbjct: 6907002 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 6906898
Score = 42.3 bits (86), Expect(5) = 2e-020
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAA 166
GL IIS+L D V T ALY EI GH ELTT A
Sbjct: 6853692 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 6853796
Score = 37.3 bits (75), Expect(5) = 2e-020
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -2 / -2
Query: 426 MI*SSSMLMTWVN*LSLTPSLKIIM 352
+I*SSS+L TW+N* SLTPSL +++
Sbjct: 6907335 II*SSSILRTWLN*DSLTPSLHVLV 6907261
Score = 37.3 bits (75), Expect(2) = 4e-005
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
KNI+ L+EL VVV LS + +LG LLIQ+L CL
Sbjct: 6907543 KNIIRAFGLEELRVVVYLSYDQCKLGILLLIQELACL 6907433
Score = 37.3 bits (75), Expect(5) = 2e-020
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -2 / +3
Query: 426 MI*SSSMLMTWVN*LSLTPSLKIIM 352
+I*SSS+L TW+N* SLTPSL +++
Sbjct: 6853359 II*SSSILRTWLN*DSLTPSLHVLV 6853433
Score = 37.3 bits (75), Expect(2) = 4e-005
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1 / +2
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
KNI+ L+EL VVV LS + +LG LLIQ+L CL
Sbjct: 6853151 KNIIRAFGLEELRVVVYLSYDQCKLGILLLIQELACL 6853261
Score = 36.3 bits (73), Expect(2) = 0.20
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*DSE T+S S PISS T * VGLVVP
Sbjct: 6907888 YT*DSECTSSWS*SVSNPISS*STW*CVGLVVP 6907790
Score = 36.3 bits (73), Expect(5) = 2e-020
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ * M+K L L+C ++ LVV++M++ PC S
Sbjct: 6907889 LHIG**MHKFLELICVKSNLVVEHMVMCWPCSS 6907791
Score = 36.3 bits (73), Expect(4) = 7e-026
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P T IV QK HHT+ F
Sbjct: 16028488 ACASLEPNYQPPVTFIVVQKRHHTRLF 16028568
Score = 36.3 bits (73), Expect(5) = 2e-020
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -2 / +2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*DSE T+S S PISS T * VGLVVP
Sbjct: 6852806 YT*DSECTSSWS*SVSNPISS*STW*CVGLVVP 6852904
Score = 36.3 bits (73), Expect(2) = 0.20
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1 / +1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ * M+K L L+C ++ LVV++M++ PC S
Sbjct: 6852805 LHIG**MHKFLELICVKSNLVVEHMVMCWPCSS 6852903
Score = 35.9 bits (72), Expect(2) = 0.20
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -3 / -3
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH RT CGG E S *TW TS P T MP
Sbjct: 6907550 YLEEHY*GFRFGRTSCGGLSEL*SV*TWDLTSDPRTCMP 6907434
Score = 35.9 bits (72), Expect(2) = 0.20
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -3 / +1
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH RT CGG E S *TW TS P T MP
Sbjct: 6853144 YLEEHY*GFRFGRTSCGGLSEL*SV*TWDLTSDPRTCMP 6853260
Score = 34.5 bits (69), Expect(2) = 1e-004
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1 / -3
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSS 540
GM V G EV +QV+ D S +PPH+VL + CSS
Sbjct: 6853259 GMQVLGSEVRSQVYTDHSSDKPPHEVLPNRKP**CSS 6853149
Score = 34.5 bits (69), Expect(2) = 1e-004
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSS 540
GM V G EV +QV+ D S +PPH+VL + CSS
Sbjct: 6907435 GMQVLGSEVRSQVYTDHSSDKPPHEVLPNRKP**CSS 6907545
Score = 33.6 bits (67), Expect = 6.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1 / -1
Query: 31 CKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
C AWW E ++ N + S++HH GC +W
Sbjct: 6854017 CIAWWIEFSFGYGAVRNNASGNESSYHHYWNGCISW 6853910
Score = 33.6 bits (67), Expect = 6.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1 / +2
Query: 31 CKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
C AWW E ++ N + S++HH GC +W
Sbjct: 6906677 CIAWWIEFSFGYGAVRNNASGNESSYHHYWNGCISW 6906784
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -1
Query: 631 GPCCSNHPSMCTHVEVEVLRMANFTIHHS 545
GP S + + THV+ LR+A +IHHS
Sbjct: 19016584 GPVSSGNHKLTTHVQCTQLRIAALSIHHS 19016498
Score = 32.2 bits (64), Expect(2) = 1e-004
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / -3
Query: 352 HNYFQGWSQ*KSVYPGHQH*AGSD 423
H Y QGW Q* SV P +* GSD
Sbjct: 6853433 HQYMQGWCQ*ISV*PSS*Y*TGSD 6853362
Score = 32.2 bits (64), Expect(2) = 1e-004
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / +1
Query: 352 HNYFQGWSQ*KSVYPGHQH*AGSD 423
H Y QGW Q* SV P +* GSD
Sbjct: 6907261 HQYMQGWCQ*ISV*PSS*Y*TGSD 6907332
Score = 31.3 bits (62), Expect(2) = 4e-005
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 430 LDDLIQLNVDDLGKLTFTDSIP 365
L LIQ N+ +L KL FTD+IP
Sbjct: 6907339 LHHLIQFNIKNLVKLRFTDTIP 6907274
Score = 31.3 bits (62), Expect(2) = 4e-005
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 430 LDDLIQLNVDDLGKLTFTDSIP 365
L LIQ N+ +L KL FTD+IP
Sbjct: 6853355 LHHLIQFNIKNLVKLRFTDTIP 6853420
Score = 30.4 bits (60), Expect(4) = 7e-026
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 368 DGVSESQFTQVINIELDQIIEACKFL 445
DGVSE QF QV+ ELD I + F+
Sbjct: 16028335 DGVSEGQFYQVLLYELDAIRKVKTFV 16028412
>ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G43810 (ZLL) mRNA, complete cds
Length = 3330
Score = 111 bits (238), Expect(3) = 2e-053
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 2658 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2837
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 2838 ADGIQSLTNNLCYTY 2882
Score = 76.2 bits (160), Expect(3) = 2e-053
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ + P G + L+ + + +KP II +RDGVSE QF
Sbjct: 2358 AQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFY 2537
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T IV QK HHT+ F
Sbjct: 2538 QVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2654
Score = 62.5 bits (130), Expect(3) = 2e-053
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L S IP VS +PTII G DV+H G++ A V
Sbjct: 2130 YLANVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVV 2309
Query: 182 SRQ 190
+ Q
Sbjct: 2310 ASQ 2318
Score = 47.8 bits (98), Expect(3) = 9e-011
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -2 / -3
Query: 681 ISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
I SA K SS RT * GL+VP IPA *KS +G L+STTVPG+
Sbjct: 2848 IPSAVKLFSSQRTW*CAGLLVP*IPAWLQR*KSNSVG*HILVSTTVPGK 2702
Score = 45.1 bits (92), Expect = 0.002
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = -1 / -2
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
+++ L+ +C E LV +NM++ P CS + M T VEVE M F++++S+
Sbjct: 2864 VSQRLNTICCEIVLVPKNMVMCRPACSLNTRMATKVEVEFSWMTYFSVNYST 2709
Score = 44.1 bits (90), Expect(2) = 3e-005
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2 / +3
Query: 149 QDRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
+ PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 2280 ESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 2399
Score = 36.8 bits (74), Expect(3) = 9e-011
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2 / -3
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS PKM+VG T GI + ++ F PP F LI +RY
Sbjct: 2257 TSAPKMIVGISLTSGILQLMASTRTVFLPPIFTLILRDTFARY 2129
Score = 28.1 bits (55), Expect(3) = 9e-011
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = -2 / -3
Query: 501 VWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
VW F T+ V G F S + A I S+S T N SLTPS I+ SGF
Sbjct: 2644 VW*RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGF 2483
Score = 25.4 bits (49), Expect(2) = 3e-005
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +1 / +2
Query: 334 KAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPH 501
+AKT ++ WS+ +++ * G + +G+ ++ E+ C++ PH
Sbjct: 2477 RAKTASNYLLS*WSKRRAILSSFTL*VGCNSKGLCIA*TELSATGDIHSCTEASPH 2644
>emb|AX505737.1| Sequence 432 from Patent WO0216655
Length = 2967
Score = 111 bits (238), Expect(3) = 2e-053
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 2530 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2709
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 2710 ADGIQSLTNNLCYTY 2754
Score = 76.2 bits (160), Expect(3) = 2e-053
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ + P G + L+ + + +KP II +RDGVSE QF
Sbjct: 2230 AQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFY 2409
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T IV QK HHT+ F
Sbjct: 2410 QVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2526
Score = 62.5 bits (130), Expect(3) = 2e-053
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L S IP VS +PTII G DV+H G++ A V
Sbjct: 2002 YLANVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVV 2181
Query: 182 SRQ 190
+ Q
Sbjct: 2182 ASQ 2190
Score = 47.8 bits (98), Expect(3) = 7e-011
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -2 / -2
Query: 681 ISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
I SA K SS RT * GL+VP IPA *KS +G L+STTVPG+
Sbjct: 2720 IPSAVKLFSSQRTW*CAGLLVP*IPAWLQR*KSNSVG*HILVSTTVPGK 2574
Score = 45.1 bits (92), Expect = 0.002
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = -1 / -1
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
+++ L+ +C E LV +NM++ P CS + M T VEVE M F++++S+
Sbjct: 2736 VSQRLNTICCEIVLVPKNMVMCRPACSLNTRMATKVEVEFSWMTYFSVNYST 2581
Score = 44.1 bits (90), Expect(2) = 3e-005
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2 / +1
Query: 149 QDRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
+ PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 2152 ESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 2271
Score = 36.8 bits (74), Expect(3) = 7e-011
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2 / -2
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS PKM+VG T GI + ++ F PP F LI +RY
Sbjct: 2129 TSAPKMIVGISLTSGILQLMASTRTVFLPPIFTLILRDTFARY 2001
Score = 28.1 bits (55), Expect(3) = 7e-011
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = -2 / -2
Query: 501 VWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
VW F T+ V G F S + A I S+S T N SLTPS I+ SGF
Sbjct: 2516 VW*RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGF 2355
Score = 25.4 bits (49), Expect(2) = 3e-005
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +1 / +3
Query: 334 KAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPH 501
+AKT ++ WS+ +++ * G + +G+ ++ E+ C++ PH
Sbjct: 2349 RAKTASNYLLS*WSKRRAILSSFTL*VGCNSKGLCIA*TELSATGDIHSCTEASPH 2516
>emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwille protein
Length = 3323
Score = 111 bits (238), Expect(3) = 8e-053
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 2658 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 2837
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 2838 ADGIQSLTNNLCYTY 2882
Score = 76.2 bits (160), Expect(3) = 8e-053
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ + P G + L+ + + +KP II +RDGVSE QF
Sbjct: 2358 AQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFY 2537
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T IV QK HHT+ F
Sbjct: 2538 QVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 2654
Score = 60.2 bits (125), Expect(3) = 8e-053
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL ++ +KIN K+GG N++L S IP VS +PTII G DV+H G++ A V
Sbjct: 2130 YLADVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVV 2309
Query: 182 SRQ 190
+ Q
Sbjct: 2310 ASQ 2318
Score = 47.8 bits (98), Expect(3) = 2e-010
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -2 / -2
Query: 681 ISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
I SA K SS RT * GL+VP IPA *KS +G L+STTVPG+
Sbjct: 2848 IPSAVKLFSSQRTW*CAGLLVP*IPAWLQR*KSNSVG*HILVSTTVPGK 2702
Score = 45.1 bits (92), Expect = 0.002
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = -1 / -1
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
+++ L+ +C E LV +NM++ P CS + M T VEVE M F++++S+
Sbjct: 2864 VSQRLNTICCEIVLVPKNMVMCRPACSLNTRMATKVEVEFSWMTYFSVNYST 2709
Score = 44.1 bits (90), Expect(2) = 3e-005
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2 / +3
Query: 149 QDRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
+ PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 2280 ESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 2399
Score = 35.9 bits (72), Expect(3) = 2e-010
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2 / -2
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS PKM+VG T GI + ++ F PP F LI +RY
Sbjct: 2257 TSAPKMIVGISLTSGILQLMASTRTVFLPPIFTLILRDTSARY 2129
Score = 28.1 bits (55), Expect(3) = 2e-010
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = -2 / -2
Query: 501 VWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
VW F T+ V G F S + A I S+S T N SLTPS I+ SGF
Sbjct: 2644 VW*RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGF 2483
Score = 25.4 bits (49), Expect(2) = 3e-005
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +1 / +2
Query: 334 KAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPH 501
+AKT ++ WS+ +++ * G + +G+ ++ E+ C++ PH
Sbjct: 2477 RAKTASNYLLS*WSKRRAILSSFTL*VGCNSKGLCIA*TELSATGDIHSCTEASPH 2644
>emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL43ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1092
Score = 105 bits (223), Expect(4) = 5e-052
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +2 / +2
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+ PGTVVD+K+CHP FDFY+ +HAG+ GT+RP HYHVL DE GF+AD++Q
Sbjct: 506 TDKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLT 685
Query: 695 HSLSYVY 715
++L Y Y
Sbjct: 686 NNLCYTY 706
Score = 72.1 bits (151), Expect(4) = 5e-052
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +2 / +2
Query: 344 PEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
P+ II +RDGVSE QF+QV+ E+ I +AC L E + P+ T ++ QK HHT+ F
Sbjct: 311 PQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 478
Score = 51.5 bits (106), Expect(2) = 2e-007
Identities = 29/49 (59%), Positives = 31/49 (63%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA KP SS T * GL+VP IPA *KS LG Q L+STTVPG
Sbjct: 675 CN*SAVKPFSSRSTW*CAGLLVP*IPAWLFK*KSNSLG*QILVSTTVPG 529
Score = 50.1 bits (103), Expect = 7e-005
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ ET L+ + M++ P CS + SM +EVE +R+ +F++H S+ NI
Sbjct: 676 LQLISGETVLIEKYMVMCRPACSLNTSMAVQIEVEFIRVTDFSVHDSTWLNI 521
Score = 46.0 bits (94), Expect(4) = 5e-052
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S WP I++YR V Q+ R E++ L+K
Sbjct: 114 PSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYK 224
Score = 40.5 bits (82), Expect(4) = 5e-052
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 50 NSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
N++L +IP ++ PTII+G DV+H PG+D A V
Sbjct: 3 NTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAV 131
Score = 35.9 bits (72), Expect = 1.4
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1 / +1
Query: 529 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRF 666
Q S+ C G *+L * +RLL CW N +A L C++R +RF
Sbjct: 520 QYSTRYCRGH*NLSP**IRLLFEQPCWYSGNKQAGTLPCTSR*ERF 657
Score = 28.1 bits (55), Expect(2) = 2e-007
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = -2 / -3
Query: 252 IISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
IISSL T+ YL I G E TTAA EGL
Sbjct: 208 IISSL*A*AETNPRYLFISGQSIEATTAAIEGL 110
>gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB75ZH02 3PRIM, mRNA sequence
Length = 922
Score = 204 bits (441), Expect = 2e-051
Identities = 80/120 (66%), Positives = 98/120 (81%)
Frame = +2 / -1
Query: 239 RLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELD 418
+ +M+ SL K GT +DG+I+E ++DFYTSS KRKPEHIII DGVSESQ QV+NIELD
Sbjct: 889 KAKMI*SLVKKNGTKEDGIIQELMVDFYTSSNKRKPEHIIILFDGVSESQLNQVLNIELD 710
Query: 419 QIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMC 598
QIIEA K LD W+PKF ++VAQKNHHTKFFQ SP+NV PGT++D+K+ HPKN DFY+C
Sbjct: 709 QIIEARKLLDANWNPKFLLLVAQKNHHTKFFQPTSPENVPPGTIIDNKIFHPKNNDFYLC 530
Score = 95.5 bits (202), Expect(2) = 6e-028
Identities = 53/92 (57%), Positives = 63/92 (68%)
Frame = -2 / +3
Query: 591 *KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SS 412
*KS F G LLS VPG T SGD KNLV FF*AT N G F+S++L ASMI*SS
Sbjct: 537 *KSLFFG*NILLSMIVPGGTFSGDVGWKNLV**FF*ATNKRNFGFQFASKSLRASMI*SS 716
Query: 411 SMLMTWVN*LSLTPSLKIIMCSGFRFPELV*K 316
S+ T ++* SLTPS ++++CSGF ELV*K
Sbjct: 717 SIFRT*LS*DSLTPSKRMMICSGFLLFELV*K 812
Score = 91.8 bits (194), Expect(3) = 2e-024
Identities = 37/48 (77%), Positives = 39/48 (81%)
Frame = +2 / -3
Query: 572 PKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
PK F HAGMIGTTRPTHYHVL+DEIG SADE+QE VHSLSYVY
Sbjct: 557 PKEQ*FLPLCHAGMIGTTRPTHYHVLYDEIGLSADELQELVHSLSYVY 414
Score = 84.5 bits (178), Expect(2) = 2e-019
Identities = 40/95 (42%), Positives = 61/95 (64%)
Frame = -1 / +2
Query: 598 THVEVEVLRMANFTIHHSSRKNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDL 419
T VE+ VL + F ++ +NI L+ELG+++LLS+ EL P+ + +L LDDL
Sbjct: 530 TEVEIIVLWVKYFVVNDCPWRNIFRRRWLEELGMMILLSHQQKELWVPICV*ELASLDDL 709
Query: 418 IQLNVDDLGKLTFTDSIPENNYVFWFSLSRASVEV 314
I+ N+ +L +L FT +I EN+ + WFSL RA VE+
Sbjct: 710 IKFNIQNLIELRFTHTIKENDDMLWFSLIRAGVEI 814
Score = 51.0 bits (105), Expect(2) = 6e-028
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPA 604
YT*+SE T+S SSAE+PISS RT * VG VVPIIPA
Sbjct: 415 YT*ESEWTSS*SSSAERPISSYRTW**VGRVVPIIPA 525
Score = 42.3 bits (86), Expect = 0.016
Identities = 27/75 (36%), Positives = 36/75 (48%)
Frame = -3 / +1
Query: 539 EEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K 360
EEH + RTW SFE ++ T + PR*SD Q P * + H H +
Sbjct: 589 EEHFQETLAGRTWYDDSFEPPTKGTLGSNLRLRACEPR*SDQVQYSEPD*VEIHSHHQRE 768
Query: 359 *LCVLVFAFQS*CRS 315
* LVF++ S CR+
Sbjct: 769 **YALVFSYSSWCRN 813
Score = 38.2 bits (77), Expect(3) = 2e-024
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1 / -3
Query: 289 WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRG 432
W + + R LH L KTR +++ W +* S G ++* SDHRG
Sbjct: 839 WHYTRVDGRFLHQLE*EKTRAYHHSL*WCE*ISTQSGSEY*T*SDHRG 696
Score = 33.1 bits (66), Expect(2) = 2e-019
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSM 602
VH+ R++K L V +T L++Q+++V SNH S+
Sbjct: 414 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSV 527
Score = 22.1 bits (42), Expect(3) = 2e-024
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 484 SKEPPHQVLSDGITRQCSS 540
SKE +QVL ++ +CSS
Sbjct: 644 SKESSYQVLPANVS*KCSS 588
>emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS34ZG07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3188
Score = 110 bits (235), Expect(4) = 1e-050
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 2598 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2777
Query: 710 VY 715
Y
Sbjct: 2778 TY 2783
Score = 68.4 bits (143), Expect(4) = 1e-050
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 2030 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 2209
Query: 182 SRQ 190
+ Q
Sbjct: 2210 ASQ 2218
Score = 49.2 bits (101), Expect(4) = 1e-050
Identities = 27/74 (36%), Positives = 37/74 (50%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + S KP II +RDGVSE QF
Sbjct: 2258 AQAHRQELIQDLFKEWKDPQKGLLTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFY 2437
Query: 395 QVINIELDQIIEAC 436
QV+ ELD I +AC
Sbjct: 2438 QVLLYELDAIRKAC 2479
Score = 49.2 bits (101), Expect(2) = 5e-006
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK GL+ +I + +
Sbjct: 2189 PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGLLTGGMIKELLIAFR 2368
Query: 338 RKPEH 352
R H
Sbjct: 2369 RSTGH 2383
Score = 48.3 bits (99), Expect(3) = 1e-013
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 2181 SSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 2029
Score = 47.8 bits (98), Expect(3) = 1e-013
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -2
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 2743 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 2603
Score = 30.4 bits (60), Expect(4) = 1e-050
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 443 LDEKWSPKFTVIVAQKNHHTKFF 511
L+ + P T +V QK HHT+ F
Sbjct: 2485 LEAGYQPPVTFVVVQKRHHTRLF 2553
Score = 27.2 bits (53), Expect(2) = 5e-006
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3 / +1
Query: 531 MFFLELWWIVKFAILRTSTSTCVHML 608
+F+L L W +K A L++ T T V ML
Sbjct: 2599 IFYLALLWTLKSATLQSLTFTSVVML 2676
Score = 26.7 bits (52), Expect(3) = 1e-013
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1 / -2
Query: 451 LIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
L+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 2494 LLPANTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 2384
>gb|T21581.1|T21581 3589 Lambda-PRL2 Arabidopsis thaliana cDNA clone 95A9T7, mRNA
sequence
Length = 507
Score = 154 bits (330), Expect(3) = 6e-044
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSR+WPLIS+YRASV TQ ++ EM+ SL K GT+DDG+I+E L+DFYTSS
Sbjct: 84 DVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIXSLVKKNGTEDDGIIKELLVDFYTSS 263
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINI 409
KRKPEHIII RDGVSESQF QV+NI
Sbjct: 264 NKRKPEHIIIXRDGVSESQFNQVLNI 341
Score = 79.0 bits (166), Expect(2) = 2e-019
Identities = 43/83 (51%), Positives = 49/83 (59%)
Frame = -2 / -3
Query: 399 TWVN*LSLTPSLKIIMCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCT 220
T +N* SLTPSLKI++CSGF ELV*K L IIS+L V T
Sbjct: 331 T*LN*DSLTPSLKIMICSGFLLFELV*KSTSNSLIMPSSSVPFFLTRXSIISALEGCVRT 152
Query: 219 DALYLEIRGH*RELTTAATEGLS 151
DALYL+I GH ELTTAA +G S
Sbjct: 151 DALYLDISGHSLELTTAAMDGTS 83
Score = 66.1 bits (138), Expect(2) = 1e-010
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = -1 / -2
Query: 409 NVDDLGKLTFTDSIPENNYVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRL 230
N+ +L +L FT +IP N + WFSL RA VE+ Q D AI+ S+ L + +H RL
Sbjct: 341 NIQNLIELRFTHTIPXNYDMLWFSLIRAGVEIYQQLLDNAIVFSSIFLDKGXNHLSLRRL 162
Query: 229 GVH*CSISRDKRPLTRTNHRCNRRSI 152
+ CSI + PL RT+H + R I
Sbjct: 161 CPNRCSIFGYQWPLPRTHHSSDGRDI 84
Score = 45.5 bits (93), Expect(2) = 2e-009
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 92 VSQVPTIILGMDVSHGHPGQDRPSVAAVVSS 184
+S+VPT+ILGMDVSHG PGQ A V S
Sbjct: 21 ISKVPTVILGMDVSHGSPGQSDVPSIAAVVS 113
Score = 39.6 bits (80), Expect(3) = 6e-044
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2 / +2
Query: 413 LDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
L Q I A K LD W PK + QK+HH + F
Sbjct: 347 LIQXIXAXKLLDANWDPKXXXVCGQKDHHXQVF 445
Score = 38.6 bits (78), Expect(2) = 2e-019
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2 / -3
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCD 94
T A CPG PCETSIP++ VGT +
Sbjct: 106 TAAMDGTSDCPGXPCETSIPRITVGTLE 23
Score = 38.6 bits (78), Expect(2) = 2e-009
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1 / +2
Query: 289 WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH 408
W + G+ R LH L KTR ++ F GW +* S+ G ++
Sbjct: 221 WHYQGVAGRFLHQLE*EKTRAYHNFXGWCE*ISIQSGSEY 340
Score = 24.9 bits (48), Expect(3) = 6e-044
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 99 KYPPSS*VWMFHMVIQDKI 155
++ P S WMFHM + D +
Sbjct: 28 RFQPLSLGWMFHMXLLDSL 84
Score = 22.1 bits (42), Expect(2) = 1e-010
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / -2
Query: 151 LSWMTM*NIHT*DDGGYLRH 92
LS M*NIH D+G LR+
Sbjct: 80 LSRRXM*NIHPKDNGWNLRN 21
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 106 bits (227), Expect(3) = 3e-036
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +2 / -2
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
+V +++H F +N+ PGTVVD+ + HPK FDFY+C+H G+ GT+RPTHYH+L D
Sbjct: 26105674 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 26105495
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F++DE+Q V++L Y +
Sbjct: 26105494 ENEFTSDELQRLVYNLCYTF 26105435
Score = 92.7 bits (196), Expect(2) = 3e-020
Identities = 31/62 (50%), Positives = 48/62 (77%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+KV HP +DFY+C+H G IGT++PTHY+ L DE+GF++D++Q+ + + +
Sbjct: 11184674 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 11184853
Query: 710 VY 715
+
Sbjct: 11184854 TF 11184859
Score = 88.1 bits (186), Expect(5) = 4e-040
Identities = 30/62 (48%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+ + HP +DFY+C+ G IGT++PTHY+VL DEIGF+++++Q+ + L +
Sbjct: 11191879 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 11192058
Query: 710 VY 715
+
Sbjct: 11192059 TF 11192064
Score = 68.9 bits (144), Expect(6) = 6e-025
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +2 / -1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A VS
Sbjct: 17891708 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVS 17891529
Score = 56.5 bits (117), Expect(6) = 6e-025
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / -1
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
++ GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 17890658 LIVGTVVDSKICHPTEFDFYLCSHAGI 17890578
Score = 51.9 bits (107), Expect(3) = 3e-036
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2 / -2
Query: 248 MMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQII 427
M S + D L+ + L+D + + K+ P II FRDGVSE+QF +V+ EL I
Sbjct: 26105902 MRSQTHRQEIIQDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIK 26105723
Query: 428 EAC 436
AC
Sbjct: 26105722 TAC 26105714
Score = 49.6 bits (102), Expect(5) = 4e-040
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +2 / +1
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQI 424
LI+ ++ + +++P I+IFRDGVS+ QF V+N+EL +
Sbjct: 11191645 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 11191761
Score = 49.2 bits (101), Expect = 1e-004
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = -2 / +1
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
LT A S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 17891530 LTAAIDGLESSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 17891709
Score = 46.4 bits (95), Expect(6) = 6e-025
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / -1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 17890496 GTSRPAHYHVLWDENNFTADGLQSLTNNLCY 17890404
Score = 45.1 bits (92), Expect(2) = 3e-020
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIEL 415
L+ + + ++P I+IFRDGVS++QF V+N+EL
Sbjct: 11184443 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVEL 11184550
Score = 44.6 bits (91), Expect = 0.003
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = -2 / +3
Query: 693 TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
T+ C SS SS R * VGL+VP P *KS G +STTVPG S
Sbjct: 26105457 TSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG*VITVSTTVPGGMFSWSGS 26105636
Query: 513 *KNLVWW 493
+N + W
Sbjct: 26105637 HRNSLVW 26105657
Score = 43.7 bits (89), Expect = 0.006
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -2 / -1
Query: 663 PISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
PISS RT** VGL+VPI P *KS G ++STTVP TL
Sbjct: 11192012 PISSERT***VGLLVPIAPC*LQR*KSYSNG*MIVVSTTVPEGTL 11191878
Score = 42.8 bits (87), Expect = 0.012
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C S P SS R ** VGL+VPI P *KS G TL+STTVP TL
Sbjct: 11184828 CT*SEVNPSSSQRV***VGLLVPIPPW*LQR*KSYSYG*ITLVSTTVPEGTL 11184673
Score = 40.9 bits (83), Expect = 0.043
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +2
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPK 577
++PK TVIVAQK H T+FF + D G V V K
Sbjct: 11184584 YNPKITVIVAQKRHQTRFFPATNNDGSDKGNVPSGTVVDTK 11184706
Score = 38.2 bits (77), Expect = 0.29
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = -1 / +2
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIV 527
++K L V E LV NM++ P + H M T +++++ RM+ I+H +R+ ++
Sbjct: 26105453 IHKSLQFV*SELVLVP*NMVMRWPARALHS*MATEIKIKLFRMSYHCINHCTRRYVL 26105623
Score = 38.2 bits (77), Expect(6) = 6e-025
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDF 319
VV+S+ WP I++Y V Q+ R E++ LFK G++ +I +
Sbjct: 17891417 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKY 17891271
Score = 37.7 bits (76), Expect = 0.39
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2 / -2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PSVAAVV S WP +RY + + +Q+ R E++ L
Sbjct: 26105965 PSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDL 26105861
Score = 35.9 bits (72), Expect(6) = 6e-025
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2 / -1
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+AC L+ + P T +V QK HHT+ F
Sbjct: 17890883 QACASLEAGYQPPVTFVVVQKRHHTRLF 17890800
Score = 35.9 bits (72), Expect(6) = 6e-025
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / -2
Query: 353 IIIFRDGVSESQFTQVINIELDQI 424
+I+ RDGVSE QF QV+ ELD I
Sbjct: 17891041 VILHRDGVSEGQFYQVLLYELDAI 17890970
Score = 35.9 bits (72), Expect(5) = 4e-040
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V QS R E
Sbjct: 11191522 PSIVAVVGTLNWPEANRYAARVKAQSHRKE 11191611
Score = 34.5 bits (69), Expect(5) = 4e-040
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 455 WSPKFTVIVAQKNHHTKFF 511
++P+ TVIVAQK H T+FF
Sbjct: 11191786 YNPQITVIVAQKRHQTRFF 11191842
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2 / -2
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMI 616
+T N L T S++ H K++D Y C H G+I
Sbjct: 12920794 KTQQTKNTLGSTEEGSQMQHGKSYDKYFCTHRGLI 12920690
Score = 33.1 bits (66), Expect(3) = 3e-036
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / -2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHP 145
++ NL +KINAK+GG + L S IP + + ++ M HP
Sbjct: 26106130 FVSNLALKINAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHP 26105987
Score = 31.8 bits (63), Expect(5) = 4e-040
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLN 52
YL NL +KINAK+GG N
Sbjct: 11191369 YLANLALKINAKVGGTN 11191419
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 92.7 bits (196), Expect(3) = 1e-020
Identities = 31/62 (50%), Positives = 48/62 (77%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+KV HP +DFY+C+H G IGT++PTHY+ L DE+GF++D++Q+ + + +
Sbjct: 11193474 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 11193653
Query: 710 VY 715
+
Sbjct: 11193654 TF 11193659
Score = 88.1 bits (186), Expect(5) = 4e-040
Identities = 30/62 (48%), Positives = 47/62 (75%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+ + HP +DFY+C+ G IGT++PTHY+VL DEIGF+++++Q+ + L +
Sbjct: 11200679 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 11200858
Query: 710 VY 715
+
Sbjct: 11200859 TF 11200864
Score = 49.6 bits (102), Expect(5) = 4e-040
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +2 / +2
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQI 424
LI+ ++ + +++P I+IFRDGVS+ QF V+N+EL +
Sbjct: 11200445 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 11200561
Score = 45.1 bits (92), Expect(3) = 1e-020
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2 / +3
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIEL 415
L+ + + ++P I+IFRDGVS++QF V+N+EL
Sbjct: 11193243 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVEL 11193350
Score = 43.7 bits (89), Expect = 0.006
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -2 / -1
Query: 663 PISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
PISS RT** VGL+VPI P *KS G ++STTVP TL
Sbjct: 11200812 PISSERT***VGLLVPIAPC*LQR*KSYSNG*MIVVSTTVPEGTL 11200678
Score = 42.8 bits (87), Expect = 0.012
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C S P SS R ** VGL+VPI P *KS G TL+STTVP TL
Sbjct: 11193628 CT*SEVNPSSSQRV***VGLLVPIPPW*LQR*KSYSYG*ITLVSTTVPEGTL 11193473
Score = 40.9 bits (83), Expect = 0.043
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +3
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPK 577
++PK TVIVAQK H T+FF + D G V V K
Sbjct: 11193384 YNPKITVIVAQKRHQTRFFPATNNDGSDKGNVPSGTVVDTK 11193506
Score = 35.9 bits (72), Expect(5) = 4e-040
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V QS R E
Sbjct: 11200322 PSIVAVVGTLNWPEANRYAARVKAQSHRKE 11200411
Score = 34.5 bits (69), Expect(5) = 4e-040
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 455 WSPKFTVIVAQKNHHTKFF 511
++P+ TVIVAQK H T+FF
Sbjct: 11200586 YNPQITVIVAQKRHQTRFF 11200642
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2 / -3
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMI 616
+T N L T S++ H K++D Y C H G+I
Sbjct: 12929590 KTQQTKNTLGSTEEGSQMQHGKSYDKYFCTHRGLI 12929486
Score = 32.7 bits (65), Expect(3) = 1e-020
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V Q R E
Sbjct: 11193120 PSIVAVVGTLNWPEANRYAARVIAQPHRKE 11193209
Score = 31.8 bits (63), Expect(5) = 4e-040
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLN 52
YL NL +KINAK+GG N
Sbjct: 11200169 YLANLALKINAKVGGTN 11200219
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I,
complete sequence
Length = 87618
Score = 92.7 bits (196), Expect(4) = 9e-026
Identities = 31/62 (50%), Positives = 48/62 (77%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+KV HP +DFY+C+H G IGT++PTHY+ L DE+GF++D++Q+ + + +
Sbjct: 25185 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 25364
Query: 710 VY 715
+
Sbjct: 25365 TF 25370
Score = 88.1 bits (186), Expect(5) = 4e-040
Identities = 30/62 (48%), Positives = 47/62 (75%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+ + HP +DFY+C+ G IGT++PTHY+VL DEIGF+++++Q+ + L +
Sbjct: 32390 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 32569
Query: 710 VY 715
+
Sbjct: 32570 TF 32575
Score = 49.6 bits (102), Expect(5) = 4e-040
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +2 / +2
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQI 424
LI+ ++ + +++P I+IFRDGVS+ QF V+N+EL +
Sbjct: 32156 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 32272
Score = 45.1 bits (92), Expect(4) = 9e-026
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2 / +3
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIEL 415
L+ + + ++P I+IFRDGVS++QF V+N+EL
Sbjct: 24954 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVEL 25061
Score = 43.7 bits (89), Expect = 0.006
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -2 / -1
Query: 663 PISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
PISS RT** VGL+VPI P *KS G ++STTVP TL
Sbjct: 32523 PISSERT***VGLLVPIAPC*LQR*KSYSNG*MIVVSTTVPEGTL 32389
Score = 42.8 bits (87), Expect = 0.012
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C S P SS R ** VGL+VPI P *KS G TL+STTVP TL
Sbjct: 25339 CT*SEVNPSSSQRV***VGLLVPIPPW*LQR*KSYSYG*ITLVSTTVPEGTL 25184
Score = 40.9 bits (83), Expect = 0.043
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +3
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPK 577
++PK TVIVAQK H T+FF + D G V V K
Sbjct: 25095 YNPKITVIVAQKRHQTRFFPATNNDGSDKGNVPSGTVVDTK 25217
Score = 35.9 bits (72), Expect(5) = 4e-040
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V QS R E
Sbjct: 32033 PSIVAVVGTLNWPEANRYAARVKAQSHRKE 32122
Score = 34.5 bits (69), Expect(5) = 4e-040
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 455 WSPKFTVIVAQKNHHTKFF 511
++P+ TVIVAQK H T+FF
Sbjct: 32297 YNPQITVIVAQKRHQTRFF 32353
Score = 32.7 bits (65), Expect(4) = 9e-026
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V Q R E
Sbjct: 24831 PSIVAVVGTLNWPEANRYAARVIAQPHRKE 24920
Score = 31.8 bits (63), Expect(5) = 4e-040
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLN 52
YL NL +KINAK+GG N
Sbjct: 31880 YLANLALKINAKVGGTN 31930
Score = 27.2 bits (53), Expect(4) = 9e-026
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLN 52
Y NL +K+NAK+GG N
Sbjct: 24681 YRANLALKMNAKVGGSN 24731
>gb|CK121100.1|CK121100 204j21.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J21204
5-PRIME, mRNA sequence
Length = 777
Score = 76.2 bits (160), Expect(3) = 5e-040
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + S KP II +RDGVSE QF
Sbjct: 357 AQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFY 536
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 537 QVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 653
Score = 68.4 bits (143), Expect(3) = 5e-040
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 129 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 308
Query: 182 SRQ 190
+ Q
Sbjct: 309 ASQ 317
Score = 60.6 bits (126), Expect(3) = 5e-040
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAG 610
N+LP TVVDSK+CHP FDFY+C+HAG
Sbjct: 696 NILPVTVVDSKICHPTEFDFYLCSHAG 776
Score = 48.3 bits (99), Expect(3) = 1e-010
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 280 SSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 128
Score = 48.3 bits (99), Expect(2) = 2e-006
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G++ +I + +
Sbjct: 288 PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFR 467
Query: 338 RKPEH 352
R H
Sbjct: 468 RSTGH 482
Score = 30.9 bits (61), Expect(3) = 1e-010
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 609 PACAHM*KSKFLGWQTLLSTTVPGR 535
PA *KS +GWQ L STTV G+
Sbjct: 775 PA*LQR*KSNSVGWQILESTTVTGK 701
Score = 29.0 bits (57), Expect(3) = 1e-010
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1 / -2
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
K+ V+ LL ++ Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 653 KQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 483
Score = 27.6 bits (54), Expect(2) = 2e-006
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3 / +1
Query: 531 MFFLELWWIVKFAILRTSTSTCVHML 608
+F+L L W +K A L++ T T V ML
Sbjct: 697 IFYLSLLWTLKSATLQSLTFTSVVML 774
>ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G31290 mRNA, complete cds
Length = 3585
Score = 88.1 bits (186), Expect(5) = 5e-040
Identities = 30/62 (48%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+ + HP +DFY+C+ G IGT++PTHY+VL DEIGF+++++Q+ + L +
Sbjct: 3166 NVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCF 3345
Query: 710 VY 715
+
Sbjct: 3346 TF 3351
Score = 49.6 bits (102), Expect(5) = 5e-040
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +2 / +1
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQI 424
LI+ ++ + +++P I+IFRDGVS+ QF V+N+EL +
Sbjct: 2932 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV 3048
Score = 43.7 bits (89), Expect = 0.006
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -2 / -2
Query: 663 PISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
PISS RT** VGL+VPI P *KS G ++STTVP TL
Sbjct: 3299 PISSERT***VGLLVPIAPC*LQR*KSYSNG*MIVVSTTVPEGTL 3165
Score = 35.9 bits (72), Expect(5) = 5e-040
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V QS R E
Sbjct: 2809 PSIVAVVGTLNWPEANRYAARVKAQSHRKE 2898
Score = 34.5 bits (69), Expect(5) = 5e-040
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 455 WSPKFTVIVAQKNHHTKFF 511
++P+ TVIVAQK H T+FF
Sbjct: 3073 YNPQITVIVAQKRHQTRFF 3129
Score = 31.8 bits (63), Expect(5) = 5e-040
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLN 52
YL NL +KINAK+GG N
Sbjct: 2656 YLANLALKINAKVGGTN 2706
>gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P13212
5-PRIME, mRNA sequence
Length = 775
Score = 110 bits (235), Expect(2) = 1e-037
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 204 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 383
Query: 710 VY 715
Y
Sbjct: 384 TY 389
Score = 68.4 bits (143), Expect(2) = 1e-037
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2 / +3
Query: 353 IIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
II +RDGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 3 IIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 161
Score = 47.8 bits (98), Expect(2) = 9e-006
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -1
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 349 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 209
Score = 23.5 bits (45), Expect(2) = 9e-006
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2 / -1
Query: 450 SSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
+S A + SSS TW N SLTPSL
Sbjct: 100 ASSEAQALRMASSS*SKTW*NCPSLTPSL 14
>gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana BAC T1N15 from chromosome
I, complete sequence
Length = 95295
Score = 68.9 bits (144), Expect(6) = 1e-036
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +2 / -3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A VS
Sbjct: 2932 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVS 2753
Score = 56.5 bits (117), Expect(6) = 1e-036
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / -3
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
++ GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 1882 LIVGTVVDSKICHPTEFDFYLCSHAGI 1802
Score = 49.2 bits (101), Expect(2) = 3e-006
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = -2 / +3
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
LT A S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 2754 LTAAIDGLESSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 2933
Score = 46.4 bits (95), Expect(6) = 1e-036
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / -3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 1720 GTSRPAHYHVLWDENNFTADGLQSLTNNLCY 1628
Score = 38.2 bits (77), Expect(6) = 1e-036
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2 / -3
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDF 319
VV+S+ WP I++Y V Q+ R E++ LFK G++ +I +
Sbjct: 2641 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKY 2495
Score = 35.9 bits (72), Expect(6) = 1e-036
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2 / -3
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+AC L+ + P T +V QK HHT+ F
Sbjct: 2107 QACASLEAGYQPPVTFVVVQKRHHTRLF 2024
Score = 35.9 bits (72), Expect(6) = 1e-036
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / -1
Query: 353 IIIFRDGVSESQFTQVINIELDQI 424
+I+ RDGVSE QF QV+ ELD I
Sbjct: 2265 VILHRDGVSEGQFYQVLLYELDAI 2194
Score = 32.7 bits (65), Expect(2) = 3e-006
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
IPA *KS +GWQ L STTVP
Sbjct: 1803 IPA*LQR*KSNSVGWQILESTTVP 1874
>gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M35A4 5', mRNA sequence
Length = 394
Score = 102 bits (218), Expect(2) = 2e-036
Identities = 36/57 (63%), Positives = 46/57 (80%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHS 700
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++
Sbjct: 223 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNN 393
Score = 72.5 bits (152), Expect(2) = 2e-036
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = +2 / +1
Query: 341 KPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
KP II +RDGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 10 KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 180
Score = 47.8 bits (98), Expect(2) = 2e-007
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -3
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 368 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 228
Score = 29.0 bits (57), Expect(2) = 2e-007
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1 / -2
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
K+ V+ LL ++ Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 180 KQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 10
>gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC F11A17 sequence, complete
sequence
Length = 102078
Score = 68.9 bits (144), Expect(6) = 2e-036
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A VS
Sbjct: 16024 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVS 16203
Score = 56.5 bits (117), Expect(6) = 2e-036
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / +1
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
++ GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 17074 LIVGTVVDSKICHPTEFDFYLCSHAGI 17154
Score = 49.2 bits (101), Expect(2) = 3e-006
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = -2 / -2
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
LT A S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 16202 LTAAIDGLESSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 16023
Score = 46.4 bits (95), Expect(6) = 2e-036
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 17236 GTSRPAHYHVLWDENNFTADGLQSLTNNLCY 17328
Score = 38.2 bits (77), Expect(6) = 2e-036
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2 / +1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDF 319
VV+S+ WP I++Y V Q+ R E++ LFK G++ +I +
Sbjct: 16315 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKY 16461
Score = 35.9 bits (72), Expect(6) = 2e-036
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2 / +1
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+AC L+ + P T +V QK HHT+ F
Sbjct: 16849 QACASLEAGYQPPVTFVVVQKRHHTRLF 16932
Score = 35.9 bits (72), Expect(6) = 2e-036
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 353 IIIFRDGVSESQFTQVINIELDQI 424
+I+ RDGVSE QF QV+ ELD I
Sbjct: 16691 VILHRDGVSEGQFYQVLLYELDAI 16762
Score = 32.7 bits (65), Expect(2) = 3e-006
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / -2
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
IPA *KS +GWQ L STTVP
Sbjct: 17153 IPA*LQR*KSNSVGWQILESTTVP 17082
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 106 bits (227), Expect(3) = 3e-036
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +2 / -3
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
+V +++H F +N+ PGTVVD+ + HPK FDFY+C+H G+ GT+RPTHYH+L D
Sbjct: 10344207 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 10344028
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F++DE+Q V++L Y +
Sbjct: 10344027 ENEFTSDELQRLVYNLCYTF 10343968
Score = 68.9 bits (144), Expect(6) = 2e-026
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +2 / -1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A VS
Sbjct: 2247302 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVS 2247123
Score = 56.5 bits (117), Expect(6) = 2e-026
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / -1
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
++ GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 2246252 LIVGTVVDSKICHPTEFDFYLCSHAGI 2246172
Score = 51.9 bits (107), Expect(3) = 3e-036
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2 / -3
Query: 248 MMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQII 427
M S + D L+ + L+D + + K+ P II FRDGVSE+QF +V+ EL I
Sbjct: 10344435 MRSQTHRQEIIQDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIK 10344256
Query: 428 EAC 436
AC
Sbjct: 10344255 TAC 10344247
Score = 49.2 bits (101), Expect = 1e-004
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = -2 / +1
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
LT A S PG* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 2247124 LTAAIDGLESSPG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 2247303
Score = 46.4 bits (95), Expect(6) = 2e-026
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / -1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 2246090 GTSRPAHYHVLWDENNFTADGLQSLTNNLCY 2245998
Score = 44.6 bits (91), Expect(2) = 1e-005
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = -2 / +2
Query: 693 TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
T+ C SS SS R * VGL+VP P *KS G +STTVPG S
Sbjct: 10343990 TSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG*VITVSTTVPGGMFSWSGS 10344169
Query: 513 *KNLVWW 493
+N + W
Sbjct: 10344170 HRNSLVW 10344190
Score = 38.2 bits (77), Expect(6) = 2e-026
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDF 319
VV+S+ WP I++Y V Q+ R E++ LFK G++ +I +
Sbjct: 2247011 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKY 2246865
Score = 38.2 bits (77), Expect = 0.29
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = -1 / +1
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIV 527
++K L V E LV NM++ P + H M T +++++ RM+ I+H +R+ ++
Sbjct: 10343986 IHKSLQFV*SELVLVP*NMVMRWPARALHS*MATEIKIKLFRMSYHCINHCTRRYVL 10344156
Score = 37.7 bits (76), Expect(2) = 3e-004
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PSVAAVV S WP +RY + + +Q+ R E++ L
Sbjct: 10344498 PSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDL 10344394
Score = 35.9 bits (72), Expect(6) = 2e-026
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2 / -1
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+AC L+ + P T +V QK HHT+ F
Sbjct: 2246477 QACASLEAGYQPPVTFVVVQKRHHTRLF 2246394
Score = 35.9 bits (72), Expect(6) = 2e-026
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / -2
Query: 353 IIIFRDGVSESQFTQVINIELDQI 424
+I+ RDGVSE QF QV+ ELD I
Sbjct: 2246635 VILHRDGVSEGQFYQVLLYELDAI 2246564
Score = 33.1 bits (66), Expect(3) = 3e-036
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / -3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHP 145
++ NL +KINAK+GG + L S IP + + ++ M HP
Sbjct: 10344663 FVSNLALKINAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHP 10344520
Score = 27.6 bits (54), Expect(2) = 3e-004
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / -3
Query: 104 PTIILGMDVSHGHPGQDRPSVAAVV 178
P I +G DV+H HP D A V
Sbjct: 10344555 PVIFMGADVTHPHPFDDCSPSVAAV 10344481
Score = 25.8 bits (50), Expect(2) = 1e-005
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2 / +2
Query: 414 SSMLMTWVN*LSLTPSLKIIMCSGFRFPEL 325
SS T++N +SLTPSLK ++ G F L
Sbjct: 10344269 SSSWRTFLNCVSLTPSLKNMIRFGSFFTAL 10344358
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 106 bits (227), Expect(3) = 4e-036
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +2 / -2
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
+V +++H F +N+ PGTVVD+ + HPK FDFY+C+H G+ GT+RPTHYH+L D
Sbjct: 45332 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 45153
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F++DE+Q V++L Y +
Sbjct: 45152 ENEFTSDELQRLVYNLCYTF 45093
Score = 51.9 bits (107), Expect(3) = 4e-036
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2 / -2
Query: 248 MMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQII 427
M S + D L+ + L+D + + K+ P II FRDGVSE+QF +V+ EL I
Sbjct: 45560 MRSQTHRQEIIQDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIK 45381
Query: 428 EAC 436
AC
Sbjct: 45380 TAC 45372
Score = 44.6 bits (91), Expect(2) = 1e-005
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = -2 / +1
Query: 693 TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
T+ C SS SS R * VGL+VP P *KS G +STTVPG S
Sbjct: 45115 TSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG*VITVSTTVPGGMFSWSGS 45294
Query: 513 *KNLVWW 493
+N + W
Sbjct: 45295 HRNSLVW 45315
Score = 38.2 bits (77), Expect = 0.29
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = -1 / +3
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIV 527
++K L V E LV NM++ P + H M T +++++ RM+ I+H +R+ ++
Sbjct: 45111 IHKSLQFV*SELVLVP*NMVMRWPARALHS*MATEIKIKLFRMSYHCINHCTRRYVL 45281
Score = 37.7 bits (76), Expect(2) = 4e-004
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2 / -2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PSVAAVV S WP +RY + + +Q+ R E++ L
Sbjct: 45623 PSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDL 45519
Score = 33.1 bits (66), Expect(3) = 4e-036
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / -2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHP 145
++ NL +KINAK+GG + L S IP + + ++ M HP
Sbjct: 45788 FVSNLALKINAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHP 45645
Score = 29.5 bits (58), Expect(2) = 0.69
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / -2
Query: 449 EKWSPKFTVIVAQKNHHTKFFQ 514
+ ++P T V QK HHT+ F+
Sbjct: 45362 QDYNPSITFAVVQKRHHTRLFR 45297
Score = 27.6 bits (54), Expect(2) = 4e-004
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / -2
Query: 104 PTIILGMDVSHGHPGQDRPSVAAVV 178
P I +G DV+H HP D A V
Sbjct: 45680 PVIFMGADVTHPHPFDDCSPSVAAV 45606
Score = 25.8 bits (50), Expect(2) = 1e-005
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2 / +1
Query: 414 SSMLMTWVN*LSLTPSLKIIMCSGFRFPEL 325
SS T++N +SLTPSLK ++ G F L
Sbjct: 45394 SSSWRTFLNCVSLTPSLKNMIRFGSFFTAL 45483
Score = 24.4 bits (47), Expect(2) = 0.69
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3 / -3
Query: 627 GPPTIMFCTTR*VSLQTRCRSLFIRYLT 710
G +F TR SLQT CR L I +T
Sbjct: 45181 GQRITIFYGTRTSSLQTNCRDLCIICVT 45098
>gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds
Length = 3161
Score = 106 bits (227), Expect(3) = 4e-036
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +2 / +1
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
+V +++H F +N+ PGTVVD+ + HPK FDFY+C+H G+ GT+RPTHYH+L D
Sbjct: 2677 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 2856
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F++DE+Q V++L Y +
Sbjct: 2857 ENEFTSDELQRLVYNLCYTF 2916
Score = 51.9 bits (107), Expect(3) = 4e-036
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2 / +1
Query: 248 MMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQII 427
M S + D L+ + L+D + + K+ P II FRDGVSE+QF +V+ EL I
Sbjct: 2449 MRSQTHRQEIIQDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIK 2628
Query: 428 EAC 436
AC
Sbjct: 2629 TAC 2637
Score = 44.6 bits (91), Expect(2) = 2e-005
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = -2 / -1
Query: 693 TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
T+ C SS SS R * VGL+VP P *KS G +STTVPG S
Sbjct: 2894 TSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG*VITVSTTVPGGMFSWSGS 2715
Query: 513 *KNLVWW 493
+N + W
Sbjct: 2714 HRNSLVW 2694
Score = 38.2 bits (77), Expect = 0.29
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = -1 / -3
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIV 527
++K L V E LV NM++ P + H M T +++++ RM+ I+H +R+ ++
Sbjct: 2898 IHKSLQFV*SELVLVP*NMVMRWPARALHS*MATEIKIKLFRMSYHCINHCTRRYVL 2728
Score = 37.7 bits (76), Expect(4) = 2e-007
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PSVAAVV S WP +RY + + +Q+ R E++ L
Sbjct: 2386 PSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDL 2490
Score = 33.1 bits (66), Expect(3) = 4e-036
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHP 145
++ NL +KINAK+GG + L S IP + + ++ M HP
Sbjct: 2221 FVSNLALKINAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHP 2364
Score = 29.5 bits (58), Expect(4) = 2e-007
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 449 EKWSPKFTVIVAQKNHHTKFFQ 514
+ ++P T V QK HHT+ F+
Sbjct: 2647 QDYNPSITFAVVQKRHHTRLFR 2712
Score = 27.6 bits (54), Expect(4) = 2e-007
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / +1
Query: 104 PTIILGMDVSHGHPGQDRPSVAAVV 178
P I +G DV+H HP D A V
Sbjct: 2329 PVIFMGADVTHPHPFDDCSPSVAAV 2403
Score = 25.8 bits (50), Expect(2) = 2e-005
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2 / -1
Query: 414 SSMLMTWVN*LSLTPSLKIIMCSGFRFPEL 325
SS T++N +SLTPSLK ++ G F L
Sbjct: 2615 SSSWRTFLNCVSLTPSLKNMIRFGSFFTAL 2526
Score = 24.4 bits (47), Expect(4) = 2e-007
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3 / +2
Query: 627 GPPTIMFCTTR*VSLQTRCRSLFIRYLT 710
G +F TR SLQT CR L I +T
Sbjct: 2828 GQRITIFYGTRTSSLQTNCRDLCIICVT 2911
>ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1G69440 (AGO7) mRNA,
complete cds
Length = 3163
Score = 106 bits (227), Expect(3) = 4e-036
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +2 / +1
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
+V +++H F +N+ PGTVVD+ + HPK FDFY+C+H G+ GT+RPTHYH+L D
Sbjct: 2677 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 2856
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F++DE+Q V++L Y +
Sbjct: 2857 ENEFTSDELQRLVYNLCYTF 2916
Score = 51.9 bits (107), Expect(3) = 4e-036
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2 / +1
Query: 248 MMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQII 427
M S + D L+ + L+D + + K+ P II FRDGVSE+QF +V+ EL I
Sbjct: 2449 MRSQTHRQEIIQDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIK 2628
Query: 428 EAC 436
AC
Sbjct: 2629 TAC 2637
Score = 44.6 bits (91), Expect(2) = 2e-005
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = -2 / -3
Query: 693 TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
T+ C SS SS R * VGL+VP P *KS G +STTVPG S
Sbjct: 2894 TSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG*VITVSTTVPGGMFSWSGS 2715
Query: 513 *KNLVWW 493
+N + W
Sbjct: 2714 HRNSLVW 2694
Score = 38.2 bits (77), Expect = 0.29
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = -1 / -2
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIV 527
++K L V E LV NM++ P + H M T +++++ RM+ I+H +R+ ++
Sbjct: 2898 IHKSLQFV*SELVLVP*NMVMRWPARALHS*MATEIKIKLFRMSYHCINHCTRRYVL 2728
Score = 37.7 bits (76), Expect(4) = 2e-007
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PSVAAVV S WP +RY + + +Q+ R E++ L
Sbjct: 2386 PSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDL 2490
Score = 33.1 bits (66), Expect(3) = 4e-036
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHP 145
++ NL +KINAK+GG + L S IP + + ++ M HP
Sbjct: 2221 FVSNLALKINAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHP 2364
Score = 29.5 bits (58), Expect(4) = 2e-007
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 449 EKWSPKFTVIVAQKNHHTKFFQ 514
+ ++P T V QK HHT+ F+
Sbjct: 2647 QDYNPSITFAVVQKRHHTRLFR 2712
Score = 27.6 bits (54), Expect(4) = 2e-007
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / +1
Query: 104 PTIILGMDVSHGHPGQDRPSVAAVV 178
P I +G DV+H HP D A V
Sbjct: 2329 PVIFMGADVTHPHPFDDCSPSVAAV 2403
Score = 25.8 bits (50), Expect(2) = 2e-005
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2 / -3
Query: 414 SSMLMTWVN*LSLTPSLKIIMCSGFRFPEL 325
SS T++N +SLTPSLK ++ G F L
Sbjct: 2615 SSSWRTFLNCVSLTPSLKNMIRFGSFFTAL 2526
Score = 24.4 bits (47), Expect(4) = 2e-007
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3 / +2
Query: 627 GPPTIMFCTTR*VSLQTRCRSLFIRYLT 710
G +F TR SLQT CR L I +T
Sbjct: 2828 GQRITIFYGTRTSSLQTNCRDLCIICVT 2911
>gb|CA781259.1|CA781259 014A08AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 569
Score = 95.9 bits (203), Expect(2) = 1e-035
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 389 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPGHYHVLWDENNFT 568
Score = 76.2 bits (160), Expect(2) = 1e-035
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ + P G + L+ + + +KP II +RDGVSE QF
Sbjct: 89 AQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFY 268
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T IV QK HHT+ F
Sbjct: 269 QVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 385
Score = 43.7 bits (89), Expect(2) = 4e-005
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 20 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 130
Score = 42.8 bits (87), Expect(2) = 1e-005
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / -3
Query: 666 KPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
K SS RT * GL+VP IPA *KS +G L+STTVPG+
Sbjct: 564 KLFSSQRTW*CPGLLVP*IPAWLQR*KSNSVG*HILVSTTVPGK 433
Score = 40.0 bits (81), Expect = 0.080
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -1 / -2
Query: 667 ETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
E LV +NM++ P CS + M T VEVE M F++++S+
Sbjct: 565 EIVLVPKNMVMSRPACSLNTRMATKVEVEFSWMTYFSVNYST 440
Score = 28.1 bits (55), Expect(2) = 1e-005
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = -2 / -3
Query: 501 VWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
VW F T+ V G F S + A I S+S T N SLTPS I+ SGF
Sbjct: 375 VW*RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGF 214
Score = 25.4 bits (49), Expect(2) = 4e-005
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +1 / +1
Query: 334 KAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPH 501
+AKT ++ WS+ +++ * G + +G+ ++ E+ C++ PH
Sbjct: 208 RAKTASNYLLS*WSKRRAILSSFTL*VGCNSKGLCIA*TELSATGDIHSCTEASPH 375
>gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL49a09F 3', mRNA
sequence
Length = 611
Score = 150 bits (322), Expect = 5e-035
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +2 / -2
Query: 509 FQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQE 688
FQ SP+NV PGT++D+K+CHPK DFY+CAHAGMIGTTRPTHYHVL+DEIGFSADE+QE
Sbjct: 610 FQPTSPENVPPGTIIDNKICHPKTNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQE 431
Query: 689 FVHSLSYVY 715
VHSLSYVY
Sbjct: 430 LVHSLSYVY 404
Score = 76.7 bits (161), Expect = 7e-013
Identities = 43/65 (66%), Positives = 45/65 (69%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+S SSAEKPISS RT * VG VVPIIPA A *KS G LLS VPG
Sbjct: 405 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLVFG*HILLSMIVPGG 584
Query: 534 TLSGD 520
T SGD
Sbjct: 585 TFSGD 599
Score = 45.1 bits (92), Expect = 0.002
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+ R++K L V +T L++Q+++V SNH S+ T VE+ L + F ++ +
Sbjct: 404 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIGLWVTYFVVNDCPWR 583
Query: 535 NI 530
NI
Sbjct: 584 NI 589
Score = 33.1 bits (66), Expect = 9.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / -1
Query: 589 LHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
L +C+ W+DWN + L D F R +G C A+L V
Sbjct: 530 LPLCSRWNDWNYPPNSLPRPV**DWFFS*RTSGTCPLALLCV 405
>gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769F213Q 5-PRIME, mRNA sequence
Length = 532
Score = 111 bits (238), Expect(2) = 1e-034
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 144 NNHRDKNSTHRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 323
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 324 ADGIQSLTNNLCYTY 368
Score = 57.0 bits (118), Expect(2) = 1e-034
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +2 / +3
Query: 374 VSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
VSE QF QV+ ELD I +AC L+ + P T IV QK HHT+ F
Sbjct: 3 VSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 140
Score = 47.8 bits (98), Expect = 4e-004
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -2 / -1
Query: 681 ISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
I SA K SS RT * GL+VP IPA *KS +G L+STTVPG+
Sbjct: 334 IPSAVKLFSSQRTW*CAGLLVP*IPAWLQR*KSNSVG*HILVSTTVPGK 188
Score = 45.1 bits (92), Expect = 0.002
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = -1 / -3
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
+++ L+ +C E LV +NM++ P CS + M T VEVE M F++++S+
Sbjct: 350 VSQRLNTICCEIVLVPKNMVMCRPACSLNTRMATKVEVEFSWMTYFSVNYST 195
>gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL27f05F 3', mRNA
sequence
Length = 544
Score = 146 bits (314), Expect = 6e-034
Identities = 53/64 (82%), Positives = 61/64 (95%)
Frame = +2 / -3
Query: 524 PDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSL 703
P+NV PGT++D+K+CHPKN DFY+CAHAGMIGTTRPTHYHVL+DEIGFSADE+QE VHSL
Sbjct: 542 PENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSL 363
Query: 704 SYVY 715
SYVY
Sbjct: 362 SYVY 351
Score = 77.1 bits (162), Expect = 5e-013
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+S SSAEKPISS RT * VG VVPIIPA A *KS F G LLS VPG
Sbjct: 352 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA*AQR*KSLFFG*HILLSMIVPGG 531
Query: 534 TLSG 523
T SG
Sbjct: 532 TFSG 543
Score = 48.3 bits (99), Expect = 3e-004
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+ R++K L V +T L++Q+++V SNH S+ T VE+ VL + F ++ +
Sbjct: 351 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVSTEVEIIVLWVTYFVVNDCPWR 530
Query: 535 NI 530
NI
Sbjct: 531 NI 536
Score = 33.1 bits (66), Expect = 9.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / -2
Query: 589 LHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
L +C+ W+DWN + L D F R +G C A+L V
Sbjct: 477 LPLCSRWNDWNYPPNSLPRPV**DWFFS*RTSGTCPLALLCV 352
>gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complete cds
Length = 1623
Score = 92.7 bits (196), Expect(4) = 9e-031
Identities = 31/62 (50%), Positives = 48/62 (77%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+KV HP +DFY+C+H G IGT++PTHY+ L DE+GF++D++Q+ + + +
Sbjct: 1204 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 1383
Query: 710 VY 715
+
Sbjct: 1384 TF 1389
Score = 45.1 bits (92), Expect(4) = 9e-031
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIEL 415
L+ + + ++P I+IFRDGVS++QF V+N+EL
Sbjct: 973 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVEL 1080
Score = 42.8 bits (87), Expect(2) = 0.002
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C S P SS R ** VGL+VPI P *KS G TL+STTVP TL
Sbjct: 1358 CT*SEVNPSSSQRV***VGLLVPIPPW*LQR*KSYSYG*ITLVSTTVPEGTL 1203
Score = 40.9 bits (83), Expect(2) = 0.025
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +1
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPK 577
++PK TVIVAQK H T+FF + D G V V K
Sbjct: 1114 YNPKITVIVAQKRHQTRFFPATNNDGSDKGNVPSGTVVDTK 1236
Score = 32.7 bits (65), Expect(4) = 9e-031
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V Q R E
Sbjct: 850 PSIVAVVGTLNWPEANRYAARVIAQPHRKE 939
Score = 27.2 bits (53), Expect(4) = 9e-031
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLN 52
Y NL +K+NAK+GG N
Sbjct: 700 YRANLALKMNAKVGGSN 750
Score = 23.5 bits (45), Expect(2) = 0.002
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2 / -2
Query: 84 IDEDASTCSNEFRPPSFALIFISKLSRY 1
+ ++ + S+ PP+FA I ++ +RY
Sbjct: 782 LKKEKVSISSTLLPPTFAFILRARFARY 699
Score = 21.7 bits (41), Expect(2) = 0.025
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +1 / +3
Query: 1 VPA*FADEDQCKAWWSELVAAS*SIFV 81
VP +D+ K WW + A +F+
Sbjct: 699 VPGKSCPQDERKGWWKQCRAYGYFLFL 779
>dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unknown protein, complete
cds, clone: RAFL19-70-F03
Length = 1950
Score = 92.7 bits (196), Expect(4) = 2e-030
Identities = 31/62 (50%), Positives = 48/62 (77%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+KV HP +DFY+C+H G IGT++PTHY+ L DE+GF++D++Q+ + + +
Sbjct: 1299 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 1478
Query: 710 VY 715
+
Sbjct: 1479 TF 1484
Score = 45.1 bits (92), Expect(4) = 2e-030
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2 / +3
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIEL 415
L+ + + ++P I+IFRDGVS++QF V+N+EL
Sbjct: 1068 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVEL 1175
Score = 42.8 bits (87), Expect(2) = 0.003
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C S P SS R ** VGL+VPI P *KS G TL+STTVP TL
Sbjct: 1453 CT*SEVNPSSSQRV***VGLLVPIPPW*LQR*KSYSYG*ITLVSTTVPEGTL 1298
Score = 40.9 bits (83), Expect(2) = 0.030
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +3
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPK 577
++PK TVIVAQK H T+FF + D G V V K
Sbjct: 1209 YNPKITVIVAQKRHQTRFFPATNNDGSDKGNVPSGTVVDTK 1331
Score = 32.7 bits (65), Expect(4) = 2e-030
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V Q R E
Sbjct: 945 PSIVAVVGTLNWPEANRYAARVIAQPHRKE 1034
Score = 27.2 bits (53), Expect(4) = 2e-030
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLN 52
Y NL +K+NAK+GG N
Sbjct: 795 YRANLALKMNAKVGGSN 845
Score = 23.5 bits (45), Expect(2) = 0.003
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2 / -3
Query: 84 IDEDASTCSNEFRPPSFALIFISKLSRY 1
+ ++ + S+ PP+FA I ++ +RY
Sbjct: 877 LKKEKVSISSTLLPPTFAFILRARFARY 794
Score = 21.7 bits (41), Expect(2) = 0.030
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +1 / +2
Query: 1 VPA*FADEDQCKAWWSELVAAS*SIFV 81
VP +D+ K WW + A +F+
Sbjct: 794 VPGKSCPQDERKGWWKQCRAYGYFLFL 874
>gb|AF154272.1|AF154272 Arabidopsis thaliana PINHEAD (PINHEAD) gene, complete cds
Length = 5895
Score = 57.4 bits (119), Expect(5) = 5e-030
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2 / +2
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGM 613
TAS + GTVVD+K+CHP FDFY+C+HAG+
Sbjct: 5063 TASLPPFVSGTVVDTKICHPTEFDFYLCSHAGI 5161
Score = 49.6 bits (102), Expect(5) = 5e-030
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2 / +2
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+C + GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 5234 VCVCCMI*GTSRPAHYHVLWDENNFTADGIQSLTNNLCYTY 5356
Score = 46.4 bits (95), Expect(5) = 5e-030
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRYR 214
++GG N++L S IP VS +PTII G DV+H G++ A V + + +R
Sbjct: 4128 QMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVRIIHFYQVVEHR 4307
Query: 215 ASVHT 229
S+++
Sbjct: 4308 NSLYS 4322
Score = 36.3 bits (73), Expect(5) = 5e-030
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P T IV QK HHT+ F
Sbjct: 4868 ACASLEPNYQPPVTFIVVQKRHHTRLF 4948
Score = 30.4 bits (60), Expect(5) = 5e-030
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 368 DGVSESQFTQVINIELDQIIEACKFL 445
DGVSE QF QV+ ELD I + F+
Sbjct: 4715 DGVSEGQFYQVLLYELDAIRKVKTFV 4792
Score = 27.6 bits (54), Expect(2) = 0.85
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCS 617
+++ L+ +C E LV +NM++ P CS
Sbjct: 5338 VSQRLNTICCEIVLVPKNMVMCRPACS 5258
Score = 26.3 bits (51), Expect(2) = 0.85
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / -1
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
IPA *KS +G L+STTVP
Sbjct: 5160 IPAWLQR*KSNSVG*HILVSTTVP 5089
>ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2) mRNA, complete cds
Length = 3042
Score = 92.7 bits (196), Expect(4) = 6e-030
Identities = 31/62 (50%), Positives = 48/62 (77%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV GTVVD+KV HP +DFY+C+H G IGT++PTHY+ L DE+GF++D++Q+ + + +
Sbjct: 2623 NVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 2802
Query: 710 VY 715
+
Sbjct: 2803 TF 2808
Score = 45.1 bits (92), Expect(4) = 6e-030
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIEL 415
L+ + + ++P I+IFRDGVS++QF V+N+EL
Sbjct: 2392 LVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNVEL 2499
Score = 42.8 bits (87), Expect(2) = 0.004
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C S P SS R ** VGL+VPI P *KS G TL+STTVP TL
Sbjct: 2777 CT*SEVNPSSSQRV***VGLLVPIPPW*LQR*KSYSYG*ITLVSTTVPEGTL 2622
Score = 40.9 bits (83), Expect = 0.043
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +1
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPK 577
++PK TVIVAQK H T+FF + D G V V K
Sbjct: 2533 YNPKITVIVAQKRHQTRFFPATNNDGSDKGNVPSGTVVDTK 2655
Score = 32.7 bits (65), Expect(4) = 6e-030
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLE 247
PS+ AVV + WP +RY A V Q R E
Sbjct: 2269 PSIVAVVGTLNWPEANRYAARVIAQPHRKE 2358
Score = 27.2 bits (53), Expect(4) = 6e-030
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLN 52
Y NL +K+NAK+GG N
Sbjct: 2119 YRANLALKMNAKVGGSN 2169
Score = 23.5 bits (45), Expect(2) = 0.004
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2 / -2
Query: 84 IDEDASTCSNEFRPPSFALIFISKLSRY 1
+ ++ + S+ PP+FA I ++ +RY
Sbjct: 2201 LKKEKVSISSTLLPPTFAFILRARFARY 2118
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete
sequence
Length = 94884
Score = 62.5 bits (130), Expect(4) = 1e-029
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +2 / -1
Query: 359 IFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
++ DGVSE QF+QV+ E+ I +AC L E + P+ T ++ QK HHT+ F
Sbjct: 85149 LYSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 84997
Score = 51.0 bits (105), Expect(4) = 1e-029
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2 / -1
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGM 613
L GTVVD+K+CHP FDFY+ +HAG+
Sbjct: 84864 LSGTVVDTKICHPNEFDFYLNSHAGI 84787
Score = 49.6 bits (102), Expect(4) = 1e-029
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / -3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE GF+AD++Q ++L Y
Sbjct: 84697 GTSRPAHYHVLLDENGFTADQLQMLTNNLCY 84605
Score = 48.3 bits (99), Expect(4) = 1e-029
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2 / -3
Query: 41 GGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRY 211
GG N++L +IP ++ PTII+G DV+H PG+D A V + IS Y
Sbjct: 85720 GGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVCISYFTCISLY 85550
Score = 40.0 bits (81), Expect = 0.080
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLI 313
VV+S WP I++YR V Q+ R E++ L+K GL+ LI
Sbjct: 85506 VVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 85366
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
sequence
Length = 118196
Score = 62.5 bits (130), Expect(4) = 2e-029
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +2 / -1
Query: 359 IFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
++ DGVSE QF+QV+ E+ I +AC L E + P+ T ++ QK HHT+ F
Sbjct: 3806 LYSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 3654
Score = 51.0 bits (105), Expect(4) = 2e-029
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2 / -1
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGM 613
L GTVVD+K+CHP FDFY+ +HAG+
Sbjct: 3521 LSGTVVDTKICHPNEFDFYLNSHAGI 3444
Score = 49.6 bits (102), Expect(4) = 2e-029
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / -3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE GF+AD++Q ++L Y
Sbjct: 3354 GTSRPAHYHVLLDENGFTADQLQMLTNNLCY 3262
Score = 48.3 bits (99), Expect(4) = 2e-029
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2 / -3
Query: 41 GGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRY 211
GG N++L +IP ++ PTII+G DV+H PG+D A V + IS Y
Sbjct: 4377 GGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVCISYFTCISLY 4207
Score = 40.0 bits (81), Expect = 0.080
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLI 313
VV+S WP I++YR V Q+ R E++ L+K GL+ LI
Sbjct: 4163 VVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 4023
>emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL91ZD02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 728
Score = 110 bits (235), Expect(2) = 8e-028
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 127 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 306
Query: 710 VY 715
Y
Sbjct: 307 TY 312
Score = 47.8 bits (98), Expect = 4e-004
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / -1
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 272 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 132
Score = 35.4 bits (71), Expect(2) = 8e-028
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P T +V QK HHT+ F
Sbjct: 3 ACSSLEAGYQPPVTFVVVQKRHHTRLF 83
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19
Length = 87286
Score = 57.4 bits (119), Expect(4) = 9e-026
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2 / +2
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGM 613
TAS + GTVVD+K+CHP FDFY+C+HAG+
Sbjct: 70853 TASLPPFVSGTVVDTKICHPTEFDFYLCSHAGI 70951
Score = 49.6 bits (102), Expect(4) = 9e-026
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2 / +1
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+C + GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 71023 VCVCCMI*GTSRPAHYHVLWDENNFTADGIQSLTNNLCYTY 71145
Score = 46.4 bits (95), Expect = 0.001
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRYR 214
++GG N++L S IP VS +PTII G DV+H G++ A V + + +R
Sbjct: 69918 QMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVRIIHFYQVVEHR 70097
Query: 215 ASVHT 229
S+++
Sbjct: 70098 NSLYS 70112
Score = 36.3 bits (73), Expect(4) = 9e-026
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P T IV QK HHT+ F
Sbjct: 70658 ACASLEPNYQPPVTFIVVQKRHHTRLF 70738
Score = 30.4 bits (60), Expect(4) = 9e-026
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 368 DGVSESQFTQVINIELDQIIEACKFL 445
DGVSE QF QV+ ELD I + F+
Sbjct: 70505 DGVSEGQFYQVLLYELDAIRKVKTFV 70582
Score = 27.6 bits (54), Expect(2) = 0.70
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCS 617
+++ L+ +C E LV +NM++ P CS
Sbjct: 71127 VSQRLNTICCEIVLVPKNMVMCRPACS 71047
Score = 26.3 bits (51), Expect(2) = 0.70
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / -2
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
IPA *KS +G L+STTVP
Sbjct: 70950 IPAWLQR*KSNSVG*HILVSTTVP 70879
>gb|CD534067.1|CD534067 35F4 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 420
Score = 76.2 bits (160), Expect(2) = 2e-025
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ + P G + L+ + + +KP II +RDGVSE QF
Sbjct: 7 AQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFY 186
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T IV QK HHT+ F
Sbjct: 187 QVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 303
Score = 62.0 bits (129), Expect(2) = 2e-025
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAH 604
N+H T N+LPGTVVD+K+CHP FDFY+C+H
Sbjct: 307 NNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSH 420
Score = 28.1 bits (55), Expect(2) = 1.8
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = -2 / -2
Query: 501 VWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
VW F T+ V G F S + A I S+S T N SLTPS I+ SGF
Sbjct: 293 VW*RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGF 132
Score = 24.9 bits (48), Expect(2) = 1.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 591 *KSKFLGWQTLLSTTVPGR 535
*KS +G L+STTVPG+
Sbjct: 407 *KSNSVG*HILVSTTVPGK 351
>gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL40f03F 3', mRNA
sequence
Length = 447
Score = 106 bits (226), Expect(2) = 1e-023
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +2 / -1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CH FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 360 NILPGTVVDSKICHRTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 181
Query: 710 VY 715
Y
Sbjct: 180 TY 175
Score = 44.1 bits (90), Expect = 0.005
Identities = 26/47 (55%), Positives = 28/47 (59%)
Frame = -2 / +2
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS + WQ L STTVPG+
Sbjct: 215 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVRWQILESTTVPGK 355
Score = 25.8 bits (50), Expect(2) = 1e-023
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2 / -1
Query: 470 TVIVAQKNHHTKFF 511
T +V QK HHT+ F
Sbjct: 444 TFVVVQKRHHTRLF 403
>gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ31g03_f 3', mRNA
sequence
Length = 607
Score = 110 bits (235), Expect = 5e-023
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / -2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 543 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 364
Query: 710 VY 715
Y
Sbjct: 363 TY 358
Score = 47.8 bits (98), Expect = 4e-004
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / +2
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 398 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 538
>gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL06e02F 3', mRNA sequence
Length = 575
Score = 110 bits (235), Expect = 5e-023
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / -1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 554 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 375
Query: 710 VY 715
Y
Sbjct: 374 TY 369
Score = 47.8 bits (98), Expect = 4e-004
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / +1
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 409 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 549
>gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ191b06F 3', mRNA sequence
Length = 601
Score = 110 bits (235), Expect = 5e-023
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / -3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 554 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCY 375
Query: 710 VY 715
Y
Sbjct: 374 TY 369
Score = 47.8 bits (98), Expect = 4e-004
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -2 / +1
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
SA K SS RT * G VP IPA *KS +GWQ L STTVPG+
Sbjct: 409 SAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGK 549
>gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ053e11F 3', mRNA sequence
Length = 551
Score = 106 bits (227), Expect = 6e-022
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +2 / -2
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
+V +++H F +N+ PGTVVD+ + HPK FDFY+C+H G+ GT+RPTHYH+L D
Sbjct: 484 VVQKRHHTRLFRCDPDHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWD 305
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F++DE+Q V++L Y +
Sbjct: 304 ENEFTSDELQRLVYNLCYTF 245
Score = 44.6 bits (91), Expect = 0.003
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = -2 / +3
Query: 693 TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
T+ C SS SS R * VGL+VP P *KS G +STTVPG S
Sbjct: 267 TSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG*VITVSTTVPGGMFSWSGS 446
Query: 513 *KNLVWW 493
+N + W
Sbjct: 447 HRNSLVW 467
Score = 38.2 bits (77), Expect = 0.29
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = -1 / +2
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIV 527
++K L V E LV NM++ P + H M T +++++ RM+ I+H +R+ ++
Sbjct: 263 IHKSLQFV*SELVLVP*NMVMRWPARALHS*MATEIKIKLFRMSYHCINHCTRRYVL 433
Score = 29.5 bits (58), Expect(2) = 0.98
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / -2
Query: 449 EKWSPKFTVIVAQKNHHTKFFQ 514
+ ++P T V QK HHT+ F+
Sbjct: 514 QDYNPSITFAVVQKRHHTRLFR 449
Score = 24.4 bits (47), Expect(2) = 0.98
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3 / -3
Query: 627 GPPTIMFCTTR*VSLQTRCRSLFIRYLT 710
G +F TR SLQT CR L I +T
Sbjct: 333 GQRITIFYGTRTSSLQTNCRDLCIICVT 250
>gb|BZ761910.1|BZ761910 SALK_083022.50.80.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_083022.50.80.x,
DNA sequence
Length = 430
Score = 79.4 bits (167), Expect(2) = 3e-021
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +2 / -3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVC 568
ACKFLD+K PKFT+I+AQ NHHTKFFQT SP+NVLPG + C
Sbjct: 224 ACKFLDQK*DPKFTLIIAQINHHTKFFQTESPNNVLPGKQLQIFFC 87
Score = 64.3 bits (134), Expect(2) = 1e-014
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2 / +1
Query: 567 QTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
Q + +PGRTL G +V KN VWWF *A I+VNLG +F S+NLHA
Sbjct: 88 QKNICNCLPGRTLLGLSVWKNFVWWFI*AMISVNLGSYF*SKNLHA 225
Score = 44.6 bits (91), Expect(2) = 3e-021
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / -3
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 386 RDGVSESQFNQVVNIELDQMMQ 321
Score = 37.3 bits (75), Expect(2) = 1e-014
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -2 / +1
Query: 426 MI*SSSMLMTWVN*LSLTPSLKIIM 352
+I*SSS+L TW+N* SLTPSL +++
Sbjct: 325 II*SSSILTTWLN*DSLTPSLHVLV 399
Score = 37.3 bits (75), Expect(2) = 3e-005
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1 / +3
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
KNI+ L+EL VVV LS + +LG LLIQ+L CL
Sbjct: 117 KNIIRAFGLEELRVVVYLSYDQCKLGILLLIQELACL 227
Score = 35.9 bits (72), Expect(2) = 0.008
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -3 / +2
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
+ EEH RT CGG E S *TW TS P T MP
Sbjct: 110 YLEEHY*GFRFGRTSCGGLSEL*SV*TWDLTSDPRTCMP 226
Score = 34.5 bits (69), Expect(2) = 4e-004
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1 / -2
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSS 540
GM V G EV +QV+ D S +PPH+VL + CSS
Sbjct: 225 GMQVLGSEVRSQVYTDHSSDKPPHEVLPNRKP**CSS 115
Score = 32.2 bits (64), Expect(2) = 3e-005
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1 / +3
Query: 430 LDDLIQLNVDDLGKLTFTDSIP 365
L LIQ N+++L KL FTD+IP
Sbjct: 321 LHHLIQFNINNLVKLRFTDTIP 386
Score = 31.3 bits (62), Expect(2) = 4e-004
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / -2
Query: 352 HNYFQGWSQ*KSVYPGHQH*AGSD 423
H Y QGW Q* SV P +* GSD
Sbjct: 399 HQYMQGWCQ*ISV*PSC*Y*TGSD 328
Score = 25.4 bits (49), Expect(2) = 0.008
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3 / +2
Query: 422 SDPAQC**PG*TDFH*LHP 366
SDP Q * G*T+ H* HP
Sbjct: 329 SDPVQY*QLG*TEIH*HHP 385
>gb|CC794982.1|CC794982 SALK_060402.40.25.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_060402.40.25.x,
DNA sequence
Length = 319
Score = 70.7 bits (148), Expect(2) = 3e-021
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF D++QE VHSLSYV
Sbjct: 168 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 263
Score = 52.8 bits (109), Expect(2) = 3e-021
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYH 643
GT++DS +CH N DFY+CAHAG I + + +Y+
Sbjct: 11 GTIIDSNICHQHNNDFYLCAHAGKIVSDKYIYYY 112
Score = 36.3 bits (73), Expect = 1.0
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*DSE T+S S PISS T * VGLVVP
Sbjct: 265 YT*DSECTSSWS*SVSNPISS*STW*CVGLVVP 167
Score = 36.3 bits (73), Expect = 1.0
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ * M+K L L+C ++ LVV++M++ PC S
Sbjct: 266 LHIG**MHKFLELICVKSNLVVEHMVMCWPCSS 168
>gb|AI993691.1|AI993691 701497176 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701497176, mRNA sequence
Length = 481
Score = 74.8 bits (157), Expect(2) = 6e-020
Identities = 37/98 (37%), Positives = 50/98 (51%)
Frame = +2 / +3
Query: 218 SVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQ 397
S H Q ++ P+ G + + L+ + S KP II +RDGVSE QF Q
Sbjct: 165 STHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQ 344
Query: 398 VINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
V+ ELD I +AC L + P T +V QK HHT+ F
Sbjct: 345 VLLYELDAIRKACASLXTGYQPPVTFVVVQKRHHTRLF 458
Score = 44.6 bits (91), Expect(2) = 6e-020
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 74 SSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQ 190
S IP VS PTII G DV+H HPG+D A V + Q
Sbjct: 7 SRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQ 123
Score = 34.1 bits (68), Expect(2) = 0.12
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQ 232
PS+AAVV+S+ WP I++Y V Q
Sbjct: 94 PSIAAVVASQDWPEITKYAGLVCAQ 168
Score = 28.6 bits (56), Expect(2) = 2.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1 / -3
Query: 445 QKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 392 QRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 288
Score = 25.4 bits (49), Expect(2) = 2.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDED 73
S PG* TS P +MVG T GI D
Sbjct: 86 SSPG*GWVTSAPNIMVGRSLTRGIRLD 6
Score = 23.1 bits (44), Expect(2) = 0.12
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1 / +2
Query: 289 WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYP 396
W H L *+ A T + QGWSQ* ++ P
Sbjct: 236 WWHDKGVAHSLP*INWA*TTKDHLLQGWSQ*GTILP 343
>gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Silique Col-0 Arabidopsis thaliana
cDNA clone GSLTSIL68ZF03 5PRIM, mRNA sequence
Length = 616
Score = 99.6 bits (211), Expect = 9e-020
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +2 / +1
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
L GTVVD+K+CHP FDFY+ +HAG+ GT+RP HYHVL DE GF+AD++Q ++L Y Y
Sbjct: 16 LSGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTY 195
Score = 49.6 bits (102), Expect = 1e-004
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C SA KP SS T * GL+VP IPA *KS LG Q L+STTVP + +
Sbjct: 164 CN*SAVKPFSSRSTW*CAGLLVP*IPAWLFK*KSNSLG*QILVSTTVPDKEI 9
Score = 47.8 bits (98), Expect = 4e-004
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L L+ ET L+ + M++ P CS + SM +EVE +R+ +F++H S+
Sbjct: 165 LQLISGETVLIEKYMVMCRPACSLNTSMAVQIEVEFIRVTDFSVHDST 22
Score = 34.5 bits (69), Expect = 3.6
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1 / +3
Query: 547 CGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRF 666
C G *+L * +RLL CW N +A L C++R +RF
Sbjct: 27 CRGH*NLSP**IRLLFEQPCWYSGNKQAGTLPCTSR*ERF 146
>gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL43g03F 3', mRNA
sequence
Length = 484
Score = 98.2 bits (208), Expect = 2e-019
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +2 / -1
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+CAHAGMIGTTRPTHYHVL+DEIGFSADE+QE VHSLSYVY
Sbjct: 484 LCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSLSYVY 362
Score = 52.4 bits (108), Expect = 2e-005
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPA 604
YT*+SE T+S SSAEKPISS RT * VG VVPIIPA
Sbjct: 363 YT*ESEWTSS*SSSAEKPISSYRTW**VGRVVPIIPA 473
Score = 35.0 bits (70), Expect = 2.6
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCT 596
VH+ R++K L V +T L++Q+++V SNH S+ T
Sbjct: 362 VHIGERVDKFLKFVS*KTNLIIQDVVVSWAGSSNHSSVST 481
>gb|BE525238.1|BE525238 M60B11STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M60B11 5', mRNA sequence
Length = 366
Score = 87.7 bits (185), Expect = 4e-016
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLNS+L VE + + +S+VPTIILGMDVSHG PGQ A V
Sbjct: 83 YLTNLLLKINAKLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQSDVPSIAAVV 262
Query: 182 S 184
S
Sbjct: 263 S 265
Score = 70.7 bits (148), Expect(2) = 1e-012
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +2 / +2
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGT 280
D PS+AAVVSSR+WPLIS+YRASV TQ ++ EM+ SL K GT
Sbjct: 236 DVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGT 364
Score = 48.7 bits (100), Expect(3) = 2e-018
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = -2 / -1
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
L + IIS+L V TDALYL+I GH ELTTAA +G S
Sbjct: 351 LTRDSIISALEGCVRTDALYLDISGHSLELTTAAMDGTS 235
Score = 41.4 bits (84), Expect(3) = 2e-018
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 69 STCSNEFRPPSFALIFISKLSRY 1
ST + EFRPPSFALIF SKL RY
Sbjct: 150 STLNIEFRPPSFALIFRSKLVRY 82
Score = 41.4 bits (84), Expect(3) = 2e-018
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCD 94
T A CPG PCETSIP++MVGT +
Sbjct: 258 TAAMDGTSDCPGDPCETSIPRIMVGTLE 175
Score = 24.0 bits (46), Expect(2) = 1e-012
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 99 KYPPSS*VWMFHMVIQDKI 155
++ P S WMFHM + D +
Sbjct: 180 RFQPLSLGWMFHMDLLDSL 236
>gb|BU635669.1|BU635669 028G09 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 575
Score = 85.4 bits (180), Expect(2) = 1e-017
Identities = 29/62 (46%), Positives = 46/62 (74%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV TVVD+KV HP +D Y+C+H G IGT++PTHY+ L DE+GF++D++Q+ + + +
Sbjct: 169 NVPSRTVVDTKVIHPYEYDCYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCF 348
Query: 710 VY 715
+
Sbjct: 349 TF 354
Score = 42.8 bits (87), Expect = 0.012
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2 / +1
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPK 577
++PK TVIVAQK H T+FF T + D G V V K
Sbjct: 79 YNPKITVIVAQKRHQTRFFPTTNNDGSDKGNVPSRTVVDTK 201
Score = 36.8 bits (74), Expect = 0.74
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C S P SS R ** VGL+VPI P *+S G TL+STTV TL
Sbjct: 323 CT*SEVNPSSSQRV***VGLLVPIPPW*LQR*QSYSYG*ITLVSTTVREGTL 168
Score = 26.3 bits (51), Expect(2) = 1e-017
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 371 GVSESQFTQVINIEL 415
GVS++QF V+N+EL
Sbjct: 1 GVSDAQFDMVLNVEL 45
>gb|BZ378858.1|BZ378858 SALK_112059.54.15.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_112059.54.15.x,
DNA sequence
Length = 423
Score = 67.0 bits (140), Expect(2) = 4e-017
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ R
Sbjct: 393 VVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 265
Score = 44.1 bits (90), Expect(2) = 4e-017
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / -2
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+DFY SS RKPEHIIIFR
Sbjct: 134 RELLLDFYYSSENRKPEHIIIFR 66
Score = 37.7 bits (76), Expect(2) = 9e-005
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -2 / +2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
GL IIS L D V T ALY E+ GH ELTT
Sbjct: 296 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 394
Score = 31.3 bits (62), Expect(2) = 9e-005
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / +3
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
SIPENN V WF + V+V Q FP
Sbjct: 60 SIPENNDVLWFPIL*TVVKV*QEFP 134
>gb|BZ661709.1|BZ661709 SALK_025183.55.25.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_025183.55.25.x,
DNA sequence
Length = 455
Score = 67.0 bits (140), Expect(2) = 4e-017
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / -2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSSRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G+ R
Sbjct: 346 VVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 218
Score = 44.1 bits (90), Expect(2) = 4e-017
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / -3
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+DFY SS RKPEHIIIFR
Sbjct: 87 RELLLDFYYSSENRKPEHIIIFR 19
Score = 37.7 bits (76), Expect(2) = 1e-004
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
GL IIS L D V T ALY E+ GH ELTT
Sbjct: 249 GLKRLSIISILRDCVRTHALYFEMSGHCLELTT 347
Score = 31.3 bits (62), Expect(2) = 1e-004
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / +1
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
SIPENN V WF + V+V Q FP
Sbjct: 13 SIPENNDVLWFPIL*TVVKV*QEFP 87
>gb|CL476825.1|CL476825 SAIL_260_A03.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_260_A03.v1, DNA sequence
Length = 929
Score = 57.4 bits (119), Expect(2) = 5e-016
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2 / +3
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTV 550
++P++ +IVAQKNHHTKFFQ+ PDNV PG +
Sbjct: 81 FTPQYILIVAQKNHHTKFFQSRGPDNVPPGKI 176
Score = 48.7 bits (100), Expect(2) = 5e-016
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +2 / +1
Query: 542 GTVVDSKVCHPKNFDFYMCA 601
GT++DS++CHP+NFDFY+C+
Sbjct: 253 GTIIDSQICHPRNFDFYLCS 312
Score = 41.8 bits (85), Expect = 0.023
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -2 / -2
Query: 546 VPGRTLSGDAV*KNLVWWFF*ATITVNLG 460
+PG TLSG KN VWWFF ATI + G
Sbjct: 172 LPGGTLSGPRDWKNFVWWFFWATIRIYCG 86
>gb|BZ379147.1|BZ379147 SALK_112923.34.65.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_112923.34.65.x,
DNA sequence
Length = 395
Score = 60.2 bits (125), Expect(2) = 4e-015
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2 / -3
Query: 176 VSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
V SRQWPLIS+Y+A V TQS ++EM+ +LFKP D+G R
Sbjct: 363 VRSRQWPLISKYKACVRTQSRKMEMIDNLFKPVKGKDEGKFR 238
Score = 44.1 bits (90), Expect(2) = 4e-015
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / -1
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+DFY SS RKPEHIIIFR
Sbjct: 107 RELLLDFYYSSENRKPEHIIIFR 39
Score = 35.4 bits (71), Expect(2) = 4e-004
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / +2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLSCP 145
GL IIS L D V T ALY E+ GH +LT+ + P
Sbjct: 269 GLKRLSIISILRDCVRTHALYFEMSGHCLDLTSTISINTKLP 394
Score = 31.3 bits (62), Expect(2) = 4e-004
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / +3
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
SIPENN V WF + V+V Q FP
Sbjct: 33 SIPENNDVLWFPIL*TVVKV*QEFP 107
>gb|BZ378856.1|BZ378856 SALK_112057.47.85.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_112057.47.85.x,
DNA sequence
Length = 399
Score = 57.4 bits (119), Expect(2) = 3e-014
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2 / -2
Query: 179 SSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
SSRQ PLIS+Y+A V TQS ++EM+ +LFKP D+G+ R
Sbjct: 386 SSRQCPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFR 264
Score = 44.1 bits (90), Expect(2) = 3e-014
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / -3
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+DFY SS RKPEHIIIFR
Sbjct: 133 RELLLDFYYSSENRKPEHIIIFR 65
Score = 33.1 bits (66), Expect(2) = 0.002
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -2 / +1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*REL 178
GL IIS L D V T ALY E+ GH EL
Sbjct: 295 GLKRLSIISILRDCVRTHALYFEMSGHCLEL 387
Score = 31.3 bits (62), Expect(2) = 0.002
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / +2
Query: 373 SIPENNYVFWFSLSRASVEVDQ*FP 299
SIPENN V WF + V+V Q FP
Sbjct: 59 SIPENNDVLWFPIL*TVVKV*QEFP 133
>gb|AV442417.1|AV442417 AV442417 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ31g03_r 5', mRNA
sequence
Length = 393
Score = 49.6 bits (102), Expect(2) = 3e-012
Identities = 28/78 (35%), Positives = 38/78 (48%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ S KP II +RDGVSE QF
Sbjct: 156 AQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIALRRSTGHKPLRIIFYRDGVSEGQFY 335
Query: 395 QVINIELDQIIEACKFLD 448
QV+ ELD I +AC L+
Sbjct: 336 QVLLYELDAIRKACASLE 389
Score = 47.8 bits (98), Expect = 4e-004
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G++ +I + +
Sbjct: 87 PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIALR 266
Query: 338 RKPEH 352
R H
Sbjct: 267 RSTGH 281
Score = 43.7 bits (89), Expect(2) = 3e-012
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +2 / +3
Query: 83 IPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQ 190
IP VS PTII G DV+H HPG+D A V + Q
Sbjct: 9 IPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQ 116
Score = 28.6 bits (56), Expect(2) = 2.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1 / -2
Query: 445 QKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWF 341
Q+ T L D I+ +L KL+ TDSIP + WF
Sbjct: 386 QRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WF 282
Score = 24.9 bits (48), Expect(2) = 2.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGI 82
S PG* TS P +MVG T GI
Sbjct: 79 SSPG*GWVTSAPNIMVGRSLTRGI 8
>emb|BX943872.1| Arabidopsis thaliana T-DNA flanking sequence GK-693B05-025068,
genomic survey sequence
Length = 551
Score = 70.7 bits (148), Expect = 5e-011
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYHVL+DEIGF D++QE VHSLSYV
Sbjct: 76 GTTRPTHYHVLYDEIGFDTDQLQELVHSLSYV 171
Score = 36.3 bits (73), Expect = 1.0
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*DSE T+S S PISS T * VGLVVP
Sbjct: 173 YT*DSECTSSWS*SVSNPISS*STW*CVGLVVP 75
Score = 36.3 bits (73), Expect = 1.0
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+ * M+K L L+C ++ LVV++M++ PC S
Sbjct: 174 LHIG**MHKFLELICVKSNLVVEHMVMCWPCSS 76
>emb|BX943873.1| Arabidopsis thaliana T-DNA flanking sequence GK-693B05-025072,
genomic survey sequence
Length = 538
Score = 64.8 bits (135), Expect = 3e-009
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTR THYHVL++EIGF D++QE VHSLSYV
Sbjct: 78 GTTRTTHYHVLYNEIGFDTDQLQELVHSLSYV 173
>gb|BH251007.1|BH251007 SALK_010860 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_010860, DNA sequence
Length = 435
Score = 64.3 bits (134), Expect = 4e-009
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
VVSSR+WPLIS+YRA V TQS ++EM+ SLFKP DD
Sbjct: 126 VVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 10
Score = 42.3 bits (86), Expect(2) = 3e-004
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -2 / +2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAA 166
GL IIS+L D V T ALY EI GH ELTT A
Sbjct: 29 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 133
Score = 24.0 bits (46), Expect(2) = 3e-004
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / +3
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRP 43
PG P + +PK G + GI S NEF P
Sbjct: 237 PGKPWKNPLPKRGGGNPLSQGIFPGRSLSQNEFGP 341
>gb|CC888526.1|CC888526 SALK_151983.56.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_151983.56.00.x,
DNA sequence
Length = 335
Score = 64.3 bits (134), Expect = 4e-009
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2 / -3
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
VVSSR+WPLIS+YRA V TQS ++EM+ SLFKP DD
Sbjct: 126 VVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDD 10
Score = 42.3 bits (86), Expect = 0.016
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -2 / +2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAA 166
GL IIS+L D V T ALY EI GH ELTT A
Sbjct: 29 GLKRLSIISTLGDCVRTQALYFEISGHSLELTTYA 133
>gb|BE521778.1|BE521778 M21E10STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M21E10 5', mRNA sequence
Length = 415
Score = 63.4 bits (132), Expect = 7e-009
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
Y+ N+ +KIN K+GG N++L S IP VS PTII G DV+H HP +D A V
Sbjct: 232 YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPEEDSSPSIAAV 408
Score = 44.6 bits (91), Expect = 0.003
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S G* TS P +MVG T GI D ++ S F PP+F LIF + L+ Y
Sbjct: 383 SSSG*GWVTSAPNIMVGRSLTRGIRLDRASTSTVFLPPTFTLIFSATLAMY 231
>gb|CK118552.1|CK118552 216l20.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L20216
5-PRIME, mRNA sequence
Length = 498
Score = 62.5 bits (130), Expect = 1e-008
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L S IP VS +PTII G DV+H G++ A V
Sbjct: 150 YLANVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVV 329
Query: 182 SRQ 190
+ Q
Sbjct: 330 ASQ 338
Score = 42.3 bits (86), Expect = 0.016
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 149 QDRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
+ PS+AAVV+S+ WP +++Y V Q+ R E + L+K
Sbjct: 300 ESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQETYTDLYK 419
Score = 36.8 bits (74), Expect = 0.74
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2 / -3
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS PKM+VG T GI + ++ F PP F LI +RY
Sbjct: 277 TSAPKMIVGISLTSGILQLMASTRTVFLPPIFTLILRDTFARY 149
>emb|BX001385.1| Arabidopsis thaliana T-DNA flanking sequence GK-355F06-016870,
genomic survey sequence
Length = 490
Score = 42.3 bits (86), Expect(2) = 2e-008
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 86 PHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
P VS PTII G DV+H HPG+D A VS
Sbjct: 490 PIVSDRPTIIFGADVTHPHPGEDSSPSIAAVS 395
Score = 38.2 bits (77), Expect(2) = 2e-008
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDF 319
VV+S+ WP I++Y V Q+ R E++ LFK G++ +I +
Sbjct: 283 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKY 137
>gb|AV548172.1|AV548172 AV548172 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL48g02F 3', mRNA sequence
Length = 540
Score = 61.6 bits (128), Expect = 3e-008
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2 / -3
Query: 596 CAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 538 CSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTY 419
>emb|AL935736.1| Arabidopsis thaliana transposon insertion STS SM_3.31520, sequence
tagged site
Length = 299
Score = 44.6 bits (91), Expect(2) = 3e-008
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2 / +2
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIE 412
LI+ ++ + +++P I+IFRDGVS+ QF +N+E
Sbjct: 74 LIEAHSQAPEKRPNKIVIFRDGVSDGQFDMALNVE 178
Score = 35.0 bits (70), Expect(2) = 3e-008
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2 / +1
Query: 440 FLDEKWSPKFTVIVAQKNHHTKFF 511
F ++P+ TVIVAQK H T+FF
Sbjct: 199 FAKAGYNPQITVIVAQKRHQTRFF 270
>emb|BX530820.1| Arabidopsis thaliana T-DNA flanking sequence GK-195F03-020163,
genomic survey sequence
Length = 493
Score = 46.4 bits (95), Expect(2) = 7e-008
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 127 GTSRPAHYHVLWDENNFTADGLQSLTNNLCY 219
Score = 32.2 bits (64), Expect(2) = 7e-008
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 569 HPKNFDFYMCAHAGM 613
HP F+FY+C+HAG+
Sbjct: 1 HPTYFEFYLCSHAGI 45
>gb|BE530614.1|BE530614 M78I15STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600040161R1 5', mRNA sequence
Length = 254
Score = 60.2 bits (125), Expect = 7e-008
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQD 154
YL N+ +KIN K+GG N++L S IP VS +PTII G DV+H G++
Sbjct: 99 YLANVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEE 251
Score = 36.8 bits (74), Expect = 0.74
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2 / -2
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS PKM+VG T GI + ++ F PP F LI +RY
Sbjct: 226 TSAPKMIVGISLTSGILQLMASTRTVFLPPIFTLILRDTFARY 98
>gb|N65911.1|N65911 20951 Lambda-PRL2 Arabidopsis thaliana cDNA clone 240M5T7, mRNA
sequence
Length = 377
Score = 43.2 bits (88), Expect(2) = 2e-007
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 74 SSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
S IP VS PTII G DV+H HPG+D A V
Sbjct: 7 SRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAV 111
Score = 33.6 bits (67), Expect(2) = 2e-007
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQS 235
PS+AAVV+S WP I++Y V Q+
Sbjct: 94 PSIAAVVASXDWPEITKYAGLVCAQA 171
>gb|BH753835.1|BH753835 SALK_029708.54.75.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_029708.54.75.x,
DNA sequence
Length = 191
Score = 58.3 bits (121), Expect = 2e-007
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +2 / -1
Query: 44 GLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
G NS+L +E S ++P V +VPTII+GMDVSHG PGQ
Sbjct: 149 GCNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQ 42
Score = 44.6 bits (91), Expect = 0.003
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = -2 / +1
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRP 43
CPG P +TSIP MMVGT T GI D+S E +P
Sbjct: 43 CPGEP*DTSIPIMMVGTLITRGIVPDSSISKTELQP 150
>gb|AV523023.1|AV523023 AV523023 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL13c04F 3', mRNA
sequence
Length = 462
Score = 57.0 bits (118), Expect = 6e-007
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2 / -3
Query: 641 HVLHDEIGFSADEMQEFVHSLSYVY 715
HVL+DEIGFSADE+QE VHSLSYVY
Sbjct: 460 HVLYDEIGFSADELQELVHSLSYVY 386
Score = 36.3 bits (73), Expect = 1.0
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT 643
YT*+SE T+S SSAEKPISS RT
Sbjct: 387 YT*ESEWTSS*SSSAEKPISSYRT 458
>emb|AJ522260.1|ATH522260 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
288C04
Length = 545
Score = 49.6 bits (102), Expect(2) = 4e-006
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE GF+AD++Q ++L Y
Sbjct: 129 GTSRPAHYHVLLDENGFTADQLQMLTNNLCY 221
Score = 23.1 bits (44), Expect(2) = 4e-006
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 581 FDFYMCAHAGM 613
FDFY+ +HAG+
Sbjct: 7 FDFYLNSHAGI 39
>gb|B25866.1|B25866 F28J22TRB IGF Arabidopsis thaliana genomic clone F28J22, DNA
sequence
Length = 535
Score = 49.6 bits (102), Expect(2) = 4e-006
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE GF+AD++Q ++L Y
Sbjct: 127 GTSRPAHYHVLLDENGFTADQLQMLTNNLCY 219
Score = 23.1 bits (44), Expect(2) = 4e-006
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 581 FDFYMCAHAGM 613
FDFY+ +HAG+
Sbjct: 5 FDFYLNSHAGI 37
>gb|CC180097.1|CC180097 SALK_076199.51.05.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_076199.51.05.x,
DNA sequence
Length = 345
Score = 54.2 bits (112), Expect = 4e-006
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2 / +2
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+GG +SLL S+ IP +S PTII G DV+H HPG+D A VS
Sbjct: 2 VGGTHSLLVDALSTRIPLISDQPTIIFGADVTHPHPGEDSSPSIAAVS 145
>gb|B96649.1|B96649 T30P20TR TAMU Arabidopsis thaliana genomic clone T30P20, DNA
sequence
Length = 436
Score = 35.9 bits (72), Expect(2) = 7e-006
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2 / -2
Query: 428 EACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+AC L+ + P T +V QK HHT+ F
Sbjct: 162 QACASLEAGYQPPVTFVVVQKRHHTRLF 79
Score = 35.9 bits (72), Expect(2) = 7e-006
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / -3
Query: 353 IIIFRDGVSESQFTQVINIELDQI 424
+I+ RDGVSE QF QV+ ELD I
Sbjct: 320 VILHRDGVSEGQFYQVLLYELDAI 249
>gb|CL495965.1|CL495965 SAIL_618_D07.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_618_D07.v1, DNA sequence
Length = 885
Score = 37.7 bits (76), Expect(2) = 5e-004
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2 / -3
Query: 248 MMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQ 388
M S + D L+ + L+D + + K+ P II FRDGVSE+Q
Sbjct: 247 MRSQTHRQEIIQDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQ 107
Score = 37.7 bits (76), Expect(2) = 1e-005
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PSVAAVV S WP +RY + + +Q+ R E++ L
Sbjct: 310 PSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDL 206
Score = 33.1 bits (66), Expect(2) = 1e-005
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / -3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHP 145
++ NL +KINAK+GG + L S IP + + ++ M HP
Sbjct: 475 FVSNLALKINAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHP 332
Score = 27.6 bits (54), Expect(2) = 5e-004
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / -3
Query: 104 PTIILGMDVSHGHPGQDRPSVAAVV 178
P I +G DV+H HP D A V
Sbjct: 367 PVIFMGADVTHPHPFDDCSPSVAAV 293
>gb|AV529891.1|AV529891 AV529891 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL51c02R 5', mRNA
sequence
Length = 528
Score = 51.5 bits (106), Expect = 3e-005
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2 / -1
Query: 608 GMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
G+ GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 528 GIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTY 421
>gb|BH904361.1|BH904361 SALK_104357.53.75.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_104357.53.75.x,
DNA sequence
Length = 429
Score = 50.1 bits (103), Expect = 7e-005
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / -1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE GF+AD++Q ++L Y
Sbjct: 411 GTSRPAHYHVLLDENGFTADQLQMLTNNLXY 319
>emb|BX649705.1| Arabidopsis thaliana T-DNA flanking sequence GK-120C08-012516,
genomic survey sequence
Length = 252
Score = 48.3 bits (99), Expect = 3e-004
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2 / +3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHY 640
GT++D+ +CH N D Y+CAHAG I + + ++
Sbjct: 102 GTIIDTDICHQHNIDLYLCAHAGKIASDKHIYH 200
>gb|BH862333.1|BH862333 SALK_089370 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_089370, DNA sequence
Length = 194
Score = 47.3 bits (97), Expect = 5e-004
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2 / -2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
VVSSR+ PLIS+YRA V QS ++EM+ SL +P +D
Sbjct: 136 VVSSRE*PLISKYRACVCPQSPKVEMLDSLARPVSAKED 20
Score = 35.9 bits (72), Expect = 1.4
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / +3
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAA 166
GL IS+L D T ALY EI GH ELTT A
Sbjct: 39 GLARLSSISTLGDCGHTQALYFEINGHSLELTTYA 143
>gb|AV548086.1|AV548086 AV548086 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL46g10F 3', mRNA sequence
Length = 511
Score = 46.9 bits (96), Expect = 7e-004
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2 / -1
Query: 620 TTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
T+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 511 TSRPAHYHVLWDENNFTADGLQSLTNNLCYTY 416
>emb|BX530819.1| Arabidopsis thaliana T-DNA flanking sequence GK-195F03-020162,
genomic survey sequence
Length = 465
Score = 46.4 bits (95), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 105 GTSRPAHYHVLWDENNFTADGLQSLTNNLCY 197
>gb|BE529725.1|BE529725 M75O17STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600038972R1 5', mRNA sequence
Length = 260
Score = 46.4 bits (95), Expect = 0.001
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVE 70
YL NLL+KINAKLGGLNS+L VE
Sbjct: 178 YLTNLLLKINAKLGGLNSMLSVE 246
Score = 41.4 bits (84), Expect = 0.031
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 69 STCSNEFRPPSFALIFISKLSRY 1
ST + EFRPPSFALIF SKL RY
Sbjct: 245 STLNIEFRPPSFALIFRSKLVRY 177
>gb|CC180096.1|CC180096 SALK_076191.19.35.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_076191.19.35.x,
DNA sequence
Length = 234
Score = 46.0 bits (94), Expect = 0.001
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +2 / +1
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
K+GG N LL + S+ IP +S PT+I G DV+ PG+D A V
Sbjct: 1 KVGGTNFLLVDDLSTRIPLMSDRPTVIFGADVTQPSPGEDSSPSIAAV 144
>gb|BH617562.1|BH617562 SALK_037270 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_037270, DNA sequence
Length = 424
Score = 44.6 bits (91), Expect = 0.003
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -3
Query: 623 TRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
+RP HYHVL DE GF+AD++Q ++L Y
Sbjct: 422 SRPAHYHVLLDENGFTADQLQMLTNNLCY 336
>gb|CL477094.1|CL477094 SAIL_267b_B06.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_267b_B06.v1, DNA sequence
Length = 926
Score = 44.1 bits (90), Expect = 0.005
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2 / +2
Query: 365 RDGVSESQFTQVINIELDQIIE 430
RDGVSESQF QV+NIELDQ+++
Sbjct: 452 RDGVSESQFNQVLNIELDQMMQ 517
>gb|AY600524.1| Arabidopsis thaliana hypothetical protein (At1g48405) mRNA,
complete cds
Length = 1462
Score = 44.1 bits (90), Expect = 0.005
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 626 RPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 3 RPAHYHVLWDENNFTADGLQSLTNNLCYTY 92
>gb|BZ377730.1|BZ377730 SALK_106089.15.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_106089.15.00.x,
DNA sequence
Length = 266
Score = 29.9 bits (59), Expect(2) = 0.012
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 365 RDGVSESQFTQVINIELDQIIE 430
R+GV ESQF QV ++ DQ+++
Sbjct: 148 REGVRESQFNQVXKMKWDQMMQ 83
Score = 29.9 bits (59), Expect(2) = 0.012
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 326 SSGKRKPEHIIIFR 367
SS RKPEHIIIFR
Sbjct: 265 SSENRKPEHIIIFR 224
Score = 28.6 bits (56), Expect(2) = 5.2
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 366 LKIIMCSGFRFPEL 325
LKI+MCSGF F EL
Sbjct: 225 LKIMMCSGFLFSEL 266
Score = 22.1 bits (42), Expect(2) = 5.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / +3
Query: 426 MI*SSSMLMTWVN*LSLTPSLKI 358
+I*S + T +N* SLTPSL +
Sbjct: 87 II*SHFIFXT*LN*DSLTPSLHV 155
>gb|BZ352470.1|BZ352470 SALK_080531.35.85.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_080531.35.85.x,
DNA sequence
Length = 154
Score = 41.4 bits (84), Expect = 0.031
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2 / -3
Query: 344 PEHIIIFRDGVSESQFTQVINIELDQIIEAC 436
P II FRDGVSE+QF +V+ EL I C
Sbjct: 149 PNRIIFFRDGVSETQFKKVLQEELQSIKXVC 57
>emb|BX003672.1| Arabidopsis thaliana T-DNA flanking sequence GK-373H12-017165,
genomic survey sequence
Length = 201
Score = 40.5 bits (82), Expect = 0.058
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -1
Query: 86 PHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
P S PTII G DV+H HPG+D A VS
Sbjct: 183 PIASDRPTIIFGADVTHPHPGEDSSPSIAAVS 88
>gb|BZ352471.1|BZ352471 SALK_080533.42.40.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_080533.42.40.x,
DNA sequence
Length = 153
Score = 40.0 bits (81), Expect = 0.080
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2 / -1
Query: 344 PEHIIIFRDGVSESQFTQVINIELDQIIEAC 436
P II FRDGVSE+QF +V+ E+ I C
Sbjct: 147 PNRIIFFRDGVSETQFKKVLQEEVQSIKTXC 55
>emb|CR404250.1| Arabidopsis thaliana T-DNA flanking sequence GK-869F07-026082,
genomic survey sequence
Length = 128
Score = 40.0 bits (81), Expect = 0.080
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2 / -2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYH 643
GT++DS +CH N + Y+ AHAG + + +Y+
Sbjct: 124 GTIIDSNMCHQHNSEIYLNAHAGKTVSDKYIYYY 23
>emb|AJ521659.1|ATH521659 Arabidopsis thaliana T-DNA flanking sequence, right border, clone
274C11
Length = 277
Score = 40.0 bits (81), Expect = 0.080
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLI 313
VV+S WP I++YR V Q+ R E++ L+K GL+ LI
Sbjct: 268 VVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLI 128
>gb|BH813184.1|BH813184 SALK_063806 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_063806, DNA sequence
Length = 199
Score = 39.1 bits (79), Expect = 0.15
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2 / +1
Query: 413 LDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+ I +AC L E + P+ T ++ QK HHT+ F
Sbjct: 13 MTAIRKACNSLQENYVPRVTFVIVQKRHHTRLF 111
>emb|BX003671.1| Arabidopsis thaliana T-DNA flanking sequence GK-373H12-017159,
genomic survey sequence
Length = 209
Score = 38.6 bits (78), Expect = 0.21
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 86 PHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
P VS PTII G DV+H HP +D A VS
Sbjct: 192 PIVSDRPTIIFGADVTHPHPEEDSSPSIAAVS 97
>emb|CR397125.1| Arabidopsis thaliana T-DNA flanking sequence GK-414C08-026070,
genomic survey sequence
Length = 74
Score = 38.6 bits (78), Expect = 0.21
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2 / -1
Query: 617 GTTRPTHYHVLHDEIGFSAD 676
GT+RP HYHVL DE F+AD
Sbjct: 71 GTSRPAHYHVLWDENNFTAD 12
>gb|AV532952.1|AV532952 AV532952 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB053a03F 3', mRNA sequence
Length = 507
Score = 38.6 bits (78), Expect = 0.21
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2 / -2
Query: 635 HYHVLHDEIGFSADEMQEFVHSLSYVY 715
HYHVL DE F+AD +Q ++L Y Y
Sbjct: 503 HYHVLWDENNFTADGLQSLTNNLCYTY 423
>gb|AV534003.1|AV534003 AV534003 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB072b01F 3', mRNA sequence
Length = 512
Score = 38.6 bits (78), Expect = 0.21
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2 / -2
Query: 635 HYHVLHDEIGFSADEMQEFVHSLSYVY 715
HYHVL DE F+AD +Q ++L Y Y
Sbjct: 508 HYHVLWDENNFTADGLQSLTNNLCYTY 428
>gb|AV560716.1|AV560716 AV560716 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ139e07F 3', mRNA sequence
Length = 505
Score = 38.6 bits (78), Expect = 0.21
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2 / -3
Query: 635 HYHVLHDEIGFSADEMQEFVHSLSYVY 715
HYHVL DE F+AD +Q ++L Y Y
Sbjct: 500 HYHVLWDENNFTADGLQSLTNNLCYTY 420
>gb|BZ287873.1|BZ287873 SALK_021251.35.70.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_021251.35.70.x,
DNA sequence
Length = 394
Score = 37.3 bits (75), Expect = 0.54
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2 / +3
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDF 319
VV+S+ WP I++Y V Q R E++ LFK G++ +I +
Sbjct: 57 VVASQDWPEITKYAGLVCAQDHRQELIQDLFK*WNDPHKGVVTGDMIQY 203
>gb|CL473848.1|CL473848 SAIL_208_A09.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_208_A09.v1, DNA sequence
Length = 761
Score = 35.0 bits (70), Expect = 2.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2 / -3
Query: 197 LISRYRASVHTQSARLEMMSSLFKP 271
+ S+YR V TQS ++EM+ S FKP
Sbjct: 465 VFSKYRVCVRTQSRKVEMLYSFFKP 391
>gb|BP618364.1|BP618364 BP618364 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-28-A09 3',
mRNA sequence
Length = 445
Score = 35.0 bits (70), Expect = 2.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2 / -2
Query: 638 YHVLHDEIGFSADEMQEFVHSLSYVY 715
YHVL DE F+AD +Q ++L Y Y
Sbjct: 444 YHVLWDENNFTADGLQSLTNNLCYTY 367
>gb|BZ354314.1|BZ354314 SALK_123506.30.05.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_123506.30.05.x,
DNA sequence
Length = 438
Score = 34.5 bits (69), Expect = 3.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2 / +2
Query: 179 SSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLI 313
+S WP I++YR V ++ R E++ L+K GL+ LI
Sbjct: 2 ASMDWPEINKYRGLVSARAHREEIIQDLYKLVQDPQRGLVHSGLI 136
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 34.5 bits (69), Expect = 3.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2 / -1
Query: 296 IRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDE 451
+ +LI SS RKP+ I FR I +L++I E F+DE
Sbjct: 8183317 VYHNLIQMTNSSQSRKPQVFISFRGKAQRKTLVSFIKSKLEEISEINVFMDE 8183162
>emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, BAC clone F16G20 (ESSAII
project)
Length = 97006
Score = 34.5 bits (69), Expect = 3.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2 / -1
Query: 296 IRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDE 451
+ +LI SS RKP+ I FR I +L++I E F+DE
Sbjct: 82597 VYHNLIQMTNSSQSRKPQVFISFRGKAQRKTLVSFIKSKLEEISEINVFMDE 82442
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59
Length = 199199
Score = 34.5 bits (69), Expect = 3.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2 / -2
Query: 296 IRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDE 451
+ +LI SS RKP+ I FR I +L++I E F+DE
Sbjct: 124129 VYHNLIQMTNSSQSRKPQVFISFRGKAQRKTLVSFIKSKLEEISEINVFMDE 123974
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 34.5 bits (69), Expect = 3.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2 / -2
Query: 296 IRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDE 451
+ +LI SS RKP+ I FR I +L++I E F+DE
Sbjct: 12270557 VYHNLIQMTNSSQSRKPQVFISFRGKAQRKTLVSFIKSKLEEISEINVFMDE 12270402
>gb|AU227040.1|AU227040 AU227040 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-75-E17 3',
mRNA sequence
Length = 423
Score = 28.1 bits (55), Expect(2) = 4.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / -2
Query: 563 VCHPKNFDFYMC 598
+C PK FDFY C
Sbjct: 74 LCRPKTFDFYYC 39
Score = 23.5 bits (45), Expect(2) = 4.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2 / -2
Query: 491 NHHTKFFQTASPDNVL 538
NHH F+ PDN L
Sbjct: 236 NHHYPVFRVLLPDNAL 189
>gb|AU235869.1|AU235869 AU235869 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-50-J23 5',
mRNA sequence
Length = 527
Score = 34.1 bits (68), Expect = 5.0
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2 / +3
Query: 305 SLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDE 451
+LI SS RKP+ I FR I +L++I E F+DE
Sbjct: 6 NLIQMTNSSQSRKPQVFISFRGKAQRKTLVSFIKSKLEEISEINVFMDE 152
>ref|NM_118482.2| Arabidopsis thaliana transmembrane receptor AT4G23510 mRNA,
complete cds
Length = 1925
Score = 34.1 bits (68), Expect = 5.0
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2 / +3
Query: 305 SLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDE 451
+LI SS RKP+ I FR I +L++I E F+DE
Sbjct: 6 NLIQMTNSSQSRKPQVFISFRGKAQRKTLVSFIKSKLEEISEINVFMDE 152
>gb|CA781129.1|CA781129 002C06AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 670
Score = 30.9 bits (61), Expect(2) = 6.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1 / +3
Query: 592 HVCTCWDDWNNKAHPLSCSARRDRFLCRRD 681
++C CW H CS RRD C RD
Sbjct: 567 YLCPCWH*DLRPCHRDLCSCRRDLCSCHRD 656
Score = 22.1 bits (42), Expect(2) = 6.0
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1 / +2
Query: 469 HCDCCSKEPPHQVLS 513
HC CC + P LS
Sbjct: 17 HCHCCHRRLPPPSLS 61
>gb|CW843919.1|CW843919 GT10282.Ds3.04.02.2003.jw89.501 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT10282, DNA sequence
Length = 501
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -3
Query: 631 GPCCSNHPSMCTHVEVEVLRMANFTIHHS 545
GP S + + THV+ LR+A +IHHS
Sbjct: 163 GPVSSGNHKLTTHVQCTQLRIAALSIHHS 77
>gb|AY088450.1| Arabidopsis thaliana clone 6760 mRNA, complete sequence
Length = 625
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -2
Query: 631 GPCCSNHPSMCTHVEVEVLRMANFTIHHS 545
GP S + + THV+ LR+A +IHHS
Sbjct: 267 GPVSSGNHKLTTHVQCTQLRIAALSIHHS 181
>gb|AC069160.7|AC069160 Arabidopsis thaliana chromosome 1 BAC T9I1 genomic sequence, complete
sequence
Length = 99241
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2 / -1
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMI 616
+T N L T S++ H K++D Y C H G+I
Sbjct: 12595 KTQQTKNTLGSTEEGSQMQHGKSYDKYFCTHRGLI 12491
>dbj|AB025603.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19
Length = 48420
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -3
Query: 631 GPCCSNHPSMCTHVEVEVLRMANFTIHHS 545
GP S + + THV+ LR+A +IHHS
Sbjct: 15448 GPVSSGNHKLTTHVQCTQLRIAALSIHHS 15362
>ref|NM_124595.2| Arabidopsis thaliana lipid binding AT5G52160 mRNA, complete cds
Length = 619
Score = 33.6 bits (67), Expect = 6.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -2
Query: 631 GPCCSNHPSMCTHVEVEVLRMANFTIHHS 545
GP S + + THV+ LR+A +IHHS
Sbjct: 264 GPVSSGNHKLTTHVQCTQLRIAALSIHHS 178
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project)
Length = 99008
Score = 25.4 bits (49), Expect(2) = 7.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1 / -2
Query: 484 SKEPPHQVLSDGITRQCSSWNC 549
SKE +V S + R SSW C
Sbjct: 77488 SKEKEFRVCSRRVRRNLSSWTC 77423
Score = 24.9 bits (48), Expect(2) = 7.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2 / -3
Query: 314 DFYTSSGKRKPEHIIIFRDGVSES 385
+ + SG + PEH+I+ + SES
Sbjct: 77535 EIHELSGNKNPEHLILAKRKSSES 77464
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16
Length = 80770
Score = 25.4 bits (49), Expect(2) = 7.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1 / -2
Query: 484 SKEPPHQVLSDGITRQCSSWNC 549
SKE +V S + R SSW C
Sbjct: 48627 SKEKEFRVCSRRVRRNLSSWTC 48562
Score = 24.9 bits (48), Expect(2) = 7.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2 / -3
Query: 314 DFYTSSGKRKPEHIIIFRDGVSES 385
+ + SG + PEH+I+ + SES
Sbjct: 48674 EIHELSGNKNPEHLILAKRKSSES 48603
>gb|L05363.1|ATHUBQC Arabidopsis thaliana polyubiquitin (ubq3) gene
Length = 3059
Score = 25.4 bits (49), Expect(2) = 9.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1 / +2
Query: 484 SKEPPHQVLSDGITRQCSSWNC 549
SKE +V S + R SSW C
Sbjct: 152 SKEKEFRVCSRRVRRNLSSWTC 217
Score = 24.9 bits (48), Expect(2) = 9.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 314 DFYTSSGKRKPEHIIIFRDGVSES 385
+ + SG + PEH+I+ + SES
Sbjct: 105 EIHELSGNKNPEHLILAKRKSSES 176
Database: At_nucl_with_EST.fasta
Posted date: May 2, 2006 2:53 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,663,138,464
Number of Sequences: 1013581
Number of extensions: 24197375
Number of successful extensions: 156704
Number of sequences better than 10.0: 169
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 44565775474
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)