TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.707
(919 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV784363.1|AV784363 AV784363 RAFL5 Arabidopsis thaliana ... 247 5e-064
gb|AV823405.1|AV823405 AV823405 RAFL5 Arabidopsis thaliana ... 247 5e-064
gb|CF652487.1|CF652487 58-L020526w-066-003-D16-SP6P MPIZ-AD... 247 5e-064
gb|CK120324.1|CK120324 207m05.p1 AtM1 Arabidopsis thaliana ... 247 5e-064
gb|AY050769.1| Arabidopsis thaliana putative ribosomal prot... 247 5e-064
emb|BX821549.1|CNS0A8EE Arabidopsis thaliana Full-length cD... 247 5e-064
emb|BX820934.1|CNS0A8QP Arabidopsis thaliana Full-length cD... 247 5e-064
ref|NM_127531.2| Arabidopsis thaliana structural constituen... 247 5e-064
ref|NM_001036297.1| Arabidopsis thaliana structural constit... 247 5e-064
gb|CF652479.1|CF652479 58-L020167-066-001-D16-SP6P MPIZ-ADI... 244 2e-063
gb|AY079378.1| Arabidopsis thaliana putative ribosomal prot... 244 2e-063
gb|CB265133.1|CB265133 07-E014661-035-002-N02-T7R MPIZ-ADIS... 242 1e-062
emb|AX506227.1| Sequence 922 from Patent WO0216655 242 2e-062
gb|BE038429.1|BE038429 AA17D06 AA Arabidopsis thaliana cDNA... 240 4e-062
gb|AV822896.1|AV822896 AV822896 RAFL5 Arabidopsis thaliana ... 240 4e-062
gb|AV553363.1|AV553363 AV553363 Arabidopsis thaliana roots ... 240 4e-062
gb|AV553570.1|AV553570 AV553570 Arabidopsis thaliana roots ... 240 4e-062
gb|AY072328.1| Arabidopsis thaliana putative protein (At4g2... 240 4e-062
gb|AY088304.1| Arabidopsis thaliana clone 5426 mRNA, comple... 240 4e-062
emb|BX828625.1|CNS0A2F6 Arabidopsis thaliana Full-length cD... 240 4e-062
emb|BX829363.1|CNS0A3JN Arabidopsis thaliana Full-length cD... 240 4e-062
ref|NM_119086.3| Arabidopsis thaliana structural constituen... 240 4e-062
gb|BT000047.1| Arabidopsis thaliana putative protein (At4g2... 237 3e-061
gb|CF652803.1|CF652803 77-L020578-066-004-I20-SP6P MPIZ-ADI... 230 5e-059
gb|AI995261.1|AI995261 701503270 A. thaliana, Ohio State cl... 218 2e-055
gb|AV550092.1|AV550092 AV550092 Arabidopsis thaliana roots ... 217 3e-055
gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F2... 102 1e-051
gb|AI999535.1|AI999535 701556327 A. thaliana, Columbia Col-... 203 6e-051
emb|AL096692.1|F17A13 Arabidopsis thaliana clone F17A13, **... 102 8e-049
gb|BP855931.1|BP855931 BP855931 RAFL21 Arabidopsis thaliana... 124 1e-048
emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosom... 102 3e-048
emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosom... 102 3e-048
gb|AV531508.1|AV531508 AV531508 Arabidopsis thaliana flower... 186 8e-046
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 102 1e-044
gb|BP856131.1|BP856131 BP856131 RAFL21 Arabidopsis thaliana... 180 5e-044
gb|AA042137.1|AA042137 24474 CD4-13 Arabidopsis thaliana cD... 178 2e-043
gb|BP796967.1|BP796967 BP796967 RAFL14 Arabidopsis thaliana... 166 3e-043
gb|BP863424.1|BP863424 BP863424 RAFL21 Arabidopsis thaliana... 123 2e-041
gb|BP814878.1|BP814878 BP814878 RAFL19 Arabidopsis thaliana... 168 3e-040
gb|T22823.1|T22823 4831 Lambda-PRL2 Arabidopsis thaliana cD... 166 7e-040
gb|BP865812.1|BP865812 BP865812 RAFL21 Arabidopsis thaliana... 165 2e-039
gb|AV544976.1|AV544976 AV544976 Arabidopsis thaliana roots ... 159 1e-037
gb|BP842751.1|BP842751 BP842751 RAFL21 Arabidopsis thaliana... 127 6e-037
gb|BP860079.1|BP860079 BP860079 RAFL21 Arabidopsis thaliana... 145 8e-037
gb|AV534292.1|AV534292 AV534292 Arabidopsis thaliana flower... 151 2e-035
gb|BP597676.1|BP597676 BP597676 RAFL15 Arabidopsis thaliana... 145 2e-033
gb|T44307.1|T44307 7570 Lambda-PRL2 Arabidopsis thaliana cD... 143 7e-033
gb|H37001.1|H37001 15130 Lambda-PRL2 Arabidopsis thaliana c... 142 2e-032
gb|AV819301.1|AV819301 AV819301 RAFL11 Arabidopsis thaliana... 141 4e-032
gb|AA712884.1|AA712884 32443 Lambda-PRL2 Arabidopsis thalia... 134 3e-030
gb|BE529472.1|BE529472 M74D16STM Arabidopsis developing see... 129 1e-028
gb|AV544835.1|AV544835 AV544835 Arabidopsis thaliana roots ... 127 5e-028
gb|AV564522.1|AV564522 AV564522 Arabidopsis thaliana green ... 125 2e-027
gb|BP647538.1|BP647538 BP647538 RAFL19 Arabidopsis thaliana... 124 5e-027
gb|AV788181.1|AV788181 AV788181 RAFL6 Arabidopsis thaliana ... 121 3e-026
gb|BP831674.1|BP831674 BP831674 RAFL19 Arabidopsis thaliana... 79 4e-026
gb|BP816965.1|BP816965 BP816965 RAFL19 Arabidopsis thaliana... 116 1e-024
gb|AV801623.1|AV801623 AV801623 RAFL9 Arabidopsis thaliana ... 107 6e-022
gb|AV556012.1|AV556012 AV556012 Arabidopsis thaliana green ... 106 8e-022
gb|BP564916.1|BP564916 BP564916 RAFL14 Arabidopsis thaliana... 104 5e-021
>gb|AV784363.1|AV784363 AV784363 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-18-M20 3',
mRNA sequence
Length = 648
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / -2
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 575 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 396
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 395 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 216
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 215 ARLSAISKGLRVAKSGAKQRNRQA*ASS 132
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / +1
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 130 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 309
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 310 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 489
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 490 FPLPNCFTKKQLLFFTISQINCPGTVAI 573
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / -1
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 573 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 394
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 393 GR*QGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 259
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 204 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 383
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 384 VSGLDGHSLFVCKTR 428
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / +3
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 489 VSSTELLHQETVVVLHDLPDQLSWNCRHF 575
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 183 GCQVRCQAKKQTSLSFFF 130
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 140 LKLVCFFAWHRTWQP 184
>gb|AV823405.1|AV823405 AV823405 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-18-M20 5',
mRNA sequence
Length = 673
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / +1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 58 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 237
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 238 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 417
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 418 ARLSAISKGLRVAKSGAKQRNRQA*ASS 501
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / -3
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 503 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 324
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 323 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 144
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 143 FPLPNCFTKKQLLFFTISQINCPGTVAI 60
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / +3
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 60 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 239
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 240 GR*QGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 374
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -2
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 429 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 250
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 249 VSGLDGHSLFVCKTR 205
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -2
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 144 VSSTELLHQETVVVLHDLPDQLSWNCRHF 58
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 450 GCQVRCQAKKQTSLSFFF 503
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -1
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 493 LKLVCFFAWHRTWQP 449
>gb|CF652487.1|CF652487 58-L020526w-066-003-D16-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001D163Q 5-PRIME, mRNA sequence
Length = 661
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / +2
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 44 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 223
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 224 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 403
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 404 ARLSAISKGLRVAKSGAKQRNRQA*ASS 487
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / -2
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 489 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 310
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 309 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 130
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 129 FPLPNCFTKKQLLFFTISQINCPGTVAI 46
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / +1
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 46 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 225
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 226 GR*QGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 360
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -1
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 415 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 236
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 235 VSGLDGHSLFVCKTR 191
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 130 VSSTELLHQETVVVLHDLPDQLSWNCRHF 44
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 436 GCQVRCQAKKQTSLSFFF 489
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 479 LKLVCFFAWHRTWQP 435
>gb|CK120324.1|CK120324 207m05.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011M05207
5-PRIME, mRNA sequence
Length = 623
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 48 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 227
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 228 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 407
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 408 ARLSAISKGLRVAKSGAKQRNRQA*ASS 491
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / -2
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 493 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 314
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 313 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 134
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 133 FPLPNCFTKKQLLFFTISQINCPGTVAI 50
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / +2
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 50 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 229
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 230 GR*QGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 364
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -1
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 419 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 240
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 239 VSGLDGHSLFVCKTR 195
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 134 VSSTELLHQETVVVLHDLPDQLSWNCRHF 48
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 440 GCQVRCQAKKQTSLSFFF 493
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 483 LKLVCFFAWHRTWQP 439
>gb|AY050769.1| Arabidopsis thaliana putative ribosomal protein L28 (At2g19730)
mRNA, complete cds
Length = 647
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 57 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 236
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 237 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 416
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 417 ARLSAISKGLRVAKSGAKQRNRQA*ASS 500
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / -2
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 502 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 323
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 322 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 143
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 142 FPLPNCFTKKQLLFFTISQINCPGTVAI 59
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / +2
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 59 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 238
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 239 GR*QGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 373
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -1
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 428 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 249
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 248 VSGLDGHSLFVCKTR 204
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 143 VSSTELLHQETVVVLHDLPDQLSWNCRHF 57
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 449 GCQVRCQAKKQTSLSFFF 502
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 492 LKLVCFFAWHRTWQP 448
>emb|BX821549.1|CNS0A8EE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL52ZB05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 701
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 45 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 224
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 225 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 404
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 405 ARLSAISKGLRVAKSGAKQRNRQA*ASS 488
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / -2
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 490 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 311
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 310 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 131
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 130 FPLPNCFTKKQLLFFTISQINCPGTVAI 47
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / +2
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 47 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 226
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 227 GR*QGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 361
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -1
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 416 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 237
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 236 VSGLDGHSLFVCKTR 192
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 131 VSSTELLHQETVVVLHDLPDQLSWNCRHF 45
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 437 GCQVRCQAKKQTSLSFFF 490
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 480 LKLVCFFAWHRTWQP 436
>emb|BX820934.1|CNS0A8QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH82ZG10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 695
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / +1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 43 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 222
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 223 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 402
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 403 ARLSAISKGLRVAKSGAKQRNRQA*ASS 486
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / -1
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 488 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 309
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 308 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 129
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 128 FPLPNCFTKKQLLFFTISQINCPGTVAI 45
Score = 95.9 bits (203), Expect(2) = 3e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / +3
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 45 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 224
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 225 GR*QGPSCCARHHQDQEAEQA*AFCQQVYPQEGIPQDVKGCC*PG 359
Score = 74.8 bits (157), Expect(3) = 8e-022
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -3
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 414 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRKLRLVLLLGLGGGEHNSLVL 235
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 234 VSGLDGHSLFVCKTR 190
Score = 44.1 bits (90), Expect(3) = 8e-022
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -3
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 129 VSSTELLHQETVVVLHDLPDQLSWNCRHF 43
Score = 28.6 bits (56), Expect(2) = 3e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 435 GCQVRCQAKKQTSLSFFF 488
Score = 24.9 bits (48), Expect(3) = 8e-022
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -2
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 478 LKLVCFFAWHRTWQP 434
>ref|NM_127531.2| Arabidopsis thaliana structural constituent of ribosome AT2G19730
transcript variant AT2G19730.1 mRNA, complete cds
Length = 717
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 57 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 236
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 237 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 416
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 417 ARLSAISKGLRVAKSGAKQRNRQA*ASS 500
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / -3
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 502 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 323
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 322 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 143
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 142 FPLPNCFTKKQLLFFTISQINCPGTVAI 59
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / +2
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 59 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 238
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 239 GR*QGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 373
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -2
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 428 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 249
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 248 VSGLDGHSLFVCKTR 204
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -2
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 143 VSSTELLHQETVVVLHDLPDQLSWNCRHF 57
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 449 GCQVRCQAKKQTSLSFFF 502
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -1
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 492 LKLVCFFAWHRTWQP 448
>ref|NM_001036297.1| Arabidopsis thaliana structural constituent of ribosome AT2G19730
transcript variant AT2G19730.2 mRNA, complete cds
Length = 721
Score = 247 bits (533), Expect = 5e-064
Identities = 104/148 (70%), Positives = 124/148 (83%)
Frame = -1 / +1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 61 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 240
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 241 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 420
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 421 ARLSAISKGLRVAKSGAKQRNRQA*ASS 504
Score = 162 bits (348), Expect = 2e-038
Identities = 82/148 (55%), Positives = 88/148 (59%)
Frame = +3 / -3
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 506 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 327
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 326 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 147
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 146 FPLPNCFTKKQLLFFTISQINCPGTVAI 63
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 48/105 (45%), Positives = 62/105 (59%)
Frame = -3 / +3
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 63 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 242
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
+G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 243 GR*QGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 377
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -2
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 432 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 253
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 252 VSGLDGHSLFVCKTR 208
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -2
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 147 VSSTELLHQETVVVLHDLPDQLSWNCRHF 61
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 453 GCQVRCQAKKQTSLSFFF 506
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -1
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 496 LKLVCFFAWHRTWQP 452
>gb|CF652479.1|CF652479 58-L020167-066-001-D16-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001D161Q 5-PRIME, mRNA sequence
Length = 689
Score = 244 bits (528), Expect = 2e-063
Identities = 104/148 (70%), Positives = 123/148 (83%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 45 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 224
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A D AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 225 QAAD*DQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 404
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ L+VAKSG K+KNRQ+*A S
Sbjct: 405 ARLSAIIKGLRVAKSGAKQKNRQA*ASS 488
Score = 163 bits (350), Expect = 9e-039
Identities = 83/148 (56%), Positives = 89/148 (60%)
Frame = +3 / -2
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLFF L PDLAT R LSLA A TW TA IL NS
Sbjct: 490 KEEA*ACLFFCLAPDLATLRPLMMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 311
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 310 DLLTESLGLFCFLVLVVASTTAWS*SAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 131
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVAI
Sbjct: 130 FPLPNCFTKKQLLFFTISQINCPGTVAI 47
Score = 95.0 bits (201), Expect(2) = 5e-021
Identities = 48/105 (45%), Positives = 61/105 (58%)
Frame = -3 / +2
Query: 815 NGNRSRGSDLAGCEEEQLLPCEAVRQRQCQGAVHQGAEQPLQHPLLQTLGFGEQEDCDDP 636
NG+ SR DL EE+QL EAVR R+ G++ QG QP Q LLQ L +Q+DCD P
Sbjct: 47 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 226
Query: 635 ASCKGLGCGPLYYQDQEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
G C ++QDQEAE+ QV +G+PQD +GC PG
Sbjct: 227 GR*LGPSCCARHHQDQEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 361
Score = 74.4 bits (156), Expect(3) = 1e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -1
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 416 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 237
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 236 VSGLDGHSLFVCKTR 192
Score = 44.1 bits (90), Expect(3) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCHF 817
++ ELLH+E VV+ H+LPDQ+ WN HF
Sbjct: 131 VSSTELLHQETVVVLHDLPDQLSWNCRHF 45
Score = 28.6 bits (56), Expect(2) = 5e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 425 GCQVRCQEEEQAVLSAKF 372
GCQVRCQ ++Q LS F
Sbjct: 437 GCQVRCQAKKQTSLSFFF 490
Score = 24.9 bits (48), Expect(3) = 1e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 480 LKLVCFFAWHRTWQP 436
>gb|AY079378.1| Arabidopsis thaliana putative ribosomal protein L28 (At2g19730)
mRNA, complete cds
Length = 463
Score = 244 bits (528), Expect = 2e-063
Identities = 103/147 (70%), Positives = 123/147 (83%)
Frame = -1 / +1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 180
Query: 634 PAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALA 455
A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K ALA
Sbjct: 181 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 360
Query: 454 RLSSVYLSLQVAKSGVKKKNRQS*ALS 374
RLS++ L+VAKSG K++NRQ+*A S
Sbjct: 361 RLSAISKGLRVAKSGAKQRNRQA*ASS 441
Score = 160 bits (344), Expect = 6e-038
Identities = 81/147 (55%), Positives = 87/147 (59%)
Frame = +3 / -3
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 443 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 264
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 263 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 84
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVA 812
PLPNCFT+K+L F T QI PGTVA
Sbjct: 83 FPLPNCFTKKQLLFFTISQINCPGTVA 3
Score = 74.4 bits (156), Expect(3) = 7e-021
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = +2 / -2
Query: 446 AQPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVL 625
A+ SK Q+RPVVVV +LV +SL H E L RLV R VLLLGLG E +S VL
Sbjct: 369 AESSKCSFLQVRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLGLGGGEHNSLVL 190
Query: 626 CSWLDRHSLLVRQTR 670
S LD HSL V +TR
Sbjct: 189 VSGLDGHSLFVCKTR 145
Score = 41.4 bits (84), Expect(3) = 7e-021
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2 / -2
Query: 731 IAVAELLHKEGVVLPHNLPDQIPWNGCH 814
++ ELLH+E VV+ H+LPDQ+ WN H
Sbjct: 84 VSSTELLHQETVVVLHDLPDQLSWNCRH 1
Score = 24.9 bits (48), Expect(3) = 7e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -1
Query: 382 LRTACSSS*HRTWQP 426
L+ C + HRTWQP
Sbjct: 433 LKLVCFFAWHRTWQP 389
>gb|CB265133.1|CB265133 07-E014661-035-002-N02-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000N022Q 5-PRIME, mRNA sequence
Length = 523
Score = 242 bits (523), Expect = 1e-062
Identities = 103/148 (69%), Positives = 123/148 (83%)
Frame = -1 / +1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 52 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 231
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K AL
Sbjct: 232 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 411
Query: 457 ARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
ARLS++ SL+VAKS K++NRQ+ A S
Sbjct: 412 ARLSAISNSLKVAKSRAKQRNRQALASS 495
Score = 159 bits (341), Expect = 2e-037
Identities = 79/142 (55%), Positives = 85/142 (59%)
Frame = +3 / -3
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L DLAT RL LSLA A TW TA IL NS DL
Sbjct: 479 CLFLCLARDLATLRLLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 300
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL PLPNC
Sbjct: 299 LGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNC 120
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+L F T QI PGTVAI
Sbjct: 119 FTKKQLLFFTISQINCPGTVAI 54
>emb|AX506227.1| Sequence 922 from Patent WO0216655
Length = 432
Score = 242 bits (522), Expect = 2e-062
Identities = 101/144 (70%), Positives = 121/144 (84%)
Frame = -1 / +1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 180
Query: 634 PAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALA 455
A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K ALA
Sbjct: 181 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 360
Query: 454 RLSSVYLSLQVAKSGVKKKNRQS* 383
RLS++ L+VAKSG K++NRQ+*
Sbjct: 361 RLSAISKGLRVAKSGAKQRNRQA* 432
Score = 158 bits (339), Expect = 3e-037
Identities = 78/141 (55%), Positives = 84/141 (59%)
Frame = +3 / -2
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A TW TA IL NS DL
Sbjct: 425 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 246
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL PLPNC
Sbjct: 245 LGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNC 66
Query: 750 FTRKELFFLTTCQIRSPGTVA 812
FT+K+L F T QI PGTVA
Sbjct: 65 FTKKQLLFFTISQINCPGTVA 3
>gb|BE038429.1|BE038429 AA17D06 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l28, mRNA sequence
Length = 699
Score = 240 bits (519), Expect = 4e-062
Identities = 101/146 (69%), Positives = 121/146 (82%)
Frame = -1 / +3
Query: 811 ATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQP 632
ATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTIQ
Sbjct: 9 ATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQA 188
Query: 631 AAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALAR 452
A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K ALAR
Sbjct: 189 ADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALAR 368
Query: 451 LSSVYLSLQVAKSGVKKKNRQS*ALS 374
LS++ L+ AKSG K++NRQ+*A S
Sbjct: 369 LSAISKGLRAAKSGAKQRNRQA*ASS 446
Score = 159 bits (341), Expect = 2e-037
Identities = 80/148 (54%), Positives = 87/148 (58%)
Frame = +3 / -3
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLA R LSLA A TW TA IL NS
Sbjct: 448 KEEA*ACLFLCLAPDLAALRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 269
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 268 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 89
Query: 732 LPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PLPNCFT+K+L F T QI PGTVA+
Sbjct: 88 FPLPNCFTKKQLLFFTISQINCPGTVAL 5
>gb|AV822896.1|AV822896 AV822896 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-12-O17 5',
mRNA sequence
Length = 676
Score = 240 bits (519), Expect = 4e-062
Identities = 100/151 (66%), Positives = 123/151 (81%)
Frame = -1 / +1
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 64 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 243
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL
Sbjct: 244 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLK 423
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 424 KAALARLSAISKGLRVAKSGPKRRNRQA*RI 516
Score = 148 bits (318), Expect = 2e-034
Identities = 78/142 (54%), Positives = 82/142 (57%)
Frame = +3 / -3
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 503 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 324
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 323 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 144
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+LF T QI PGTVAI
Sbjct: 143 FTKKQLFLFTISQINCPGTVAI 78
>gb|AV553363.1|AV553363 AV553363 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ60g08R 5', mRNA sequence
Length = 548
Score = 240 bits (519), Expect = 4e-062
Identities = 100/151 (66%), Positives = 123/151 (81%)
Frame = -1 / +1
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 31 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 210
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL
Sbjct: 211 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLK 390
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 391 KAALARLSAISKGLRVAKSGPKRRNRQA*RI 483
Score = 148 bits (318), Expect = 2e-034
Identities = 78/142 (54%), Positives = 82/142 (57%)
Frame = +3 / -1
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 470 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 291
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 290 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 111
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+LF T QI PGTVAI
Sbjct: 110 FTKKQLFLFTISQINCPGTVAI 45
>gb|AV553570.1|AV553570 AV553570 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ66c10R 5', mRNA sequence
Length = 505
Score = 240 bits (519), Expect = 4e-062
Identities = 100/151 (66%), Positives = 123/151 (81%)
Frame = -1 / +2
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 44 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 223
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL
Sbjct: 224 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLK 403
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 404 KAALARLSAISKGLRVAKSGPKRRNRQA*RI 496
Score = 148 bits (318), Expect = 2e-034
Identities = 78/142 (54%), Positives = 82/142 (57%)
Frame = +3 / -2
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 483 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 304
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 303 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 124
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+LF T QI PGTVAI
Sbjct: 123 FTKKQLFLFTISQINCPGTVAI 58
>gb|AY072328.1| Arabidopsis thaliana putative protein (At4g29410) mRNA, complete
cds
Length = 660
Score = 240 bits (519), Expect = 4e-062
Identities = 100/151 (66%), Positives = 123/151 (81%)
Frame = -1 / +3
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 63 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 242
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL
Sbjct: 243 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLK 422
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 423 KAALARLSAISKGLRVAKSGPKRRNRQA*RI 515
Score = 148 bits (318), Expect = 2e-034
Identities = 78/142 (54%), Positives = 82/142 (57%)
Frame = +3 / -3
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 502 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 323
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 322 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 143
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+LF T QI PGTVAI
Sbjct: 142 FTKKQLFLFTISQINCPGTVAI 77
>gb|AY088304.1| Arabidopsis thaliana clone 5426 mRNA, complete sequence
Length = 665
Score = 240 bits (519), Expect = 4e-062
Identities = 100/151 (66%), Positives = 123/151 (81%)
Frame = -1 / +2
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 68 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 247
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL
Sbjct: 248 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLK 427
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 428 KAALARLSAISKGLRVAKSGPKRRNRQA*RI 520
Score = 148 bits (318), Expect = 2e-034
Identities = 78/142 (54%), Positives = 82/142 (57%)
Frame = +3 / -3
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 507 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 328
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 327 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 148
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+LF T QI PGTVAI
Sbjct: 147 FTKKQLFLFTISQINCPGTVAI 82
>emb|BX828625.1|CNS0A2F6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL22ZH11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 691
Score = 240 bits (519), Expect = 4e-062
Identities = 100/151 (66%), Positives = 123/151 (81%)
Frame = -1 / +2
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 50 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 229
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL
Sbjct: 230 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLK 409
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 410 KAALARLSAISKGLRVAKSGPKRRNRQA*RI 502
Score = 148 bits (318), Expect = 2e-034
Identities = 78/142 (54%), Positives = 82/142 (57%)
Frame = +3 / -2
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 489 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 310
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 309 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 130
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+LF T QI PGTVAI
Sbjct: 129 FTKKQLFLFTISQINCPGTVAI 64
>emb|BX829363.1|CNS0A3JN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL95ZC06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 675
Score = 240 bits (519), Expect = 4e-062
Identities = 100/151 (66%), Positives = 123/151 (81%)
Frame = -1 / +2
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 53 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 232
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL
Sbjct: 233 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLK 412
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 413 KAALARLSAISKGLRVAKSGPKRRNRQA*RI 505
Score = 148 bits (318), Expect = 2e-034
Identities = 78/142 (54%), Positives = 82/142 (57%)
Frame = +3 / -1
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 492 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 313
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 312 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 133
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+LF T QI PGTVAI
Sbjct: 132 FTKKQLFLFTISQINCPGTVAI 67
>ref|NM_119086.3| Arabidopsis thaliana structural constituent of ribosome AT4G29410
mRNA, complete cds
Length = 709
Score = 240 bits (519), Expect = 4e-062
Identities = 100/151 (66%), Positives = 123/151 (81%)
Frame = -1 / +2
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 68 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 247
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL
Sbjct: 248 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLK 427
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 428 KAALARLSAISKGLRVAKSGPKRRNRQA*RI 520
Score = 148 bits (318), Expect = 2e-034
Identities = 78/142 (54%), Positives = 82/142 (57%)
Frame = +3 / -2
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 507 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 328
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 327 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 148
Query: 750 FTRKELFFLTTCQIRSPGTVAI 815
FT+K+LF T QI PGTVAI
Sbjct: 147 FTKKQLFLFTISQINCPGTVAI 82
>gb|BT000047.1| Arabidopsis thaliana putative protein (At4g29410) mRNA, complete
cds
Length = 556
Score = 237 bits (513), Expect = 3e-061
Identities = 99/146 (67%), Positives = 120/146 (82%)
Frame = -1 / +1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 180
Query: 634 PAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALA 455
A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K ALA
Sbjct: 181 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 360
Query: 454 RLSSVYLSLQVAKSGVKKKNRQS*AL 377
RLS++ L+VAKSG K++NRQ+* +
Sbjct: 361 RLSAISKGLRVAKSGPKRRNRQA*RI 438
Score = 146 bits (314), Expect = 8e-034
Identities = 77/141 (54%), Positives = 81/141 (57%)
Frame = +3 / -3
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 425 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 246
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC LVLVV TT S A +VTVFL AKPECL E ML RL SL+N TLALPLPNC
Sbjct: 245 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNC 66
Query: 750 FTRKELFFLTTCQIRSPGTVA 812
FT+K+LF T QI PGTVA
Sbjct: 65 FTKKQLFLFTISQINCPGTVA 3
>gb|CF652803.1|CF652803 77-L020578-066-004-I20-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001I204Q 5-PRIME, mRNA sequence
Length = 616
Score = 230 bits (497), Expect = 5e-059
Identities = 97/140 (69%), Positives = 117/140 (83%)
Frame = -1 / +2
Query: 793 LIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSA 614
LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTIQ A KD A
Sbjct: 2 LIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQA 181
Query: 613 VVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYL 434
VVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K ALARLS++
Sbjct: 182 VVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISK 361
Query: 433 SLQVAKSGVKKKNRQS*ALS 374
L+VAKSG K++NRQ+*A S
Sbjct: 362 GLRVAKSGAKQRNRQA*ASS 421
Score = 149 bits (319), Expect = 2e-034
Identities = 76/140 (54%), Positives = 82/140 (58%)
Frame = +3 / -2
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 423 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 244
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 243 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 64
Query: 732 LPLPNCFTRKELFFLTTCQI 791
PLPNCFT+K+L F T QI
Sbjct: 63 FPLPNCFTKKQLLFFTISQI 4
>gb|AI995261.1|AI995261 701503270 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701503270, mRNA sequence
Length = 420
Score = 218 bits (470), Expect = 2e-055
Identities = 90/125 (72%), Positives = 106/125 (84%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 45 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 224
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 458
Q A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL + AL
Sbjct: 225 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLQEAAL 404
Query: 457 ARLSS 443
ARLS+
Sbjct: 405 ARLSA 419
Score = 140 bits (301), Expect = 5e-032
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = +3 / -3
Query: 447 LSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSFAGAFCFLVLVVERTTAESF 626
LSLA A TW TA IL NS DL G FCFLVLVV TTA S
Sbjct: 415 LSLASAASCKSGL**LSTTWLATAFDILGNSFLRIDLLTESLGLFCFLVLVVASTTAWSL 236
Query: 627 AAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGT 806
+A W+VTVFLFA+PECL E L RL SL+N TL PLPNCFT+K+L F T QI PGT
Sbjct: 235 SAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGT 56
Query: 807 VAI 815
VAI
Sbjct: 55 VAI 47
>gb|AV550092.1|AV550092 AV550092 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ108b04R 5', mRNA sequence
Length = 422
Score = 217 bits (469), Expect = 3e-055
Identities = 93/134 (69%), Positives = 111/134 (82%)
Frame = -1 / +2
Query: 775 RKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLSTT 596
+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTIQ A KD AVVL+TT
Sbjct: 2 KNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQAVVLATT 181
Query: 595 KTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSLQVAK 416
KTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K ALARLS++ L+VAK
Sbjct: 182 KTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISKGLRVAK 361
Query: 415 SGVKKKNRQS*ALS 374
SG K++NRQ+*A S
Sbjct: 362 SGAKQRNRQA*ASS 403
Score = 143 bits (307), Expect = 7e-033
Identities = 73/134 (54%), Positives = 79/134 (58%)
Frame = +3 / -3
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRIT 551
K A* CLF L PDLAT R LSLA A TW TA IL NS
Sbjct: 405 KEEA*ACLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRI 226
Query: 552 DLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLA 731
DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL
Sbjct: 225 DLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLE 46
Query: 732 LPLPNCFTRKELFF 773
PLPNCFT+K+L F
Sbjct: 45 FPLPNCFTKKQLLF 4
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete
sequence
Length = 126386
Score = 102 bits (217), Expect(3) = 1e-051
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = -1 / -2
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG 665
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSG
Sbjct: 111646 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSG 111494
Score = 95.5 bits (202), Expect(3) = 1e-051
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = -1 / -1
Query: 670 SGLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDN 491
SGLANKKTVTIQ A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV N
Sbjct: 111029 SGLANKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVLLN 110850
Query: 490 YY 485
+Y
Sbjct: 110849 FY 110844
Score = 75.3 bits (158), Expect(3) = 6e-027
Identities = 34/57 (59%), Positives = 37/57 (64%)
Frame = +3 / +1
Query: 501 TWFFTALAILRNSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPE 671
TW TA IL NS DL G FCFLVLVV TTA S +A W+VTVFLFA+PE
Sbjct: 110860 TWLATAFDILGNSFLRIDLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPE 111030
Score = 71.6 bits (150), Expect(3) = 6e-027
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +3 / +3
Query: 666 PECLKEWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PECL E L RL SL+N TL PLPNCFT+K+L F T QI PGTVAI
Sbjct: 111495 PECL*E*TLVRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGTVAI 111644
Score = 66.1 bits (138), Expect(3) = 1e-051
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = -1 / -1
Query: 502 VSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
V DNYYRPDL K ALARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 110519 VVDNYYRPDLKKAALARLSAISKGLRVAKSGAKQRNRQA*ASS 110391
Score = 33.1 bits (66), Expect(3) = 6e-027
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +3 / +1
Query: 372 KLSA*DCLFFFLTPDLATWRLRYTELSLARA 464
K A* CLF L PDLAT R LSLA A
Sbjct: 110389 KEEA*ACLFLCLAPDLATLRPLLMALSLASA 110481
>gb|AI999535.1|AI999535 701556327 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556327, mRNA sequence
Length = 616
Score = 203 bits (438), Expect = 6e-051
Identities = 87/151 (57%), Positives = 108/151 (71%)
Frame = -1 / -1
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG IW++V++NN FLVKQFG GN VQF+KE NL NI+S+KHSGLAN
Sbjct: 580 VKELEMATVPGQXIWEIVKRNNXFLVKQFGRGNXXVQFSKESXNLVNINSYKHSGLANXX 401
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLT 470
TVTI A KD VVL TTKTK+QN P +KS++ KEF M+ V NQV NYY PDL
Sbjct: 400 TVTIXAAXKDQGVVLGTTKTKRQNKPKLSVNKSILXKEFSXMSXXVANQVVXNYYXPDLK 221
Query: 469 KPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
K LARLS++ +VAKSG K++ RQ+* +
Sbjct: 220 KXXLARLSAISKGXRVAKSGPKRRXRQA*RI 128
Score = 111 bits (238), Expect(2) = 2e-024
Identities = 55/97 (56%), Positives = 58/97 (59%)
Frame = +3 / +3
Query: 525 ILRNSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLF 704
I NS DL G FC LVLVV TT S A +VTVF AKPECL E ML RL
Sbjct: 276 IXENSFXRIDLLTESLGLFCLLVLVVPSTTPWSLXAA*MVTVFXLAKPECLYELMLTRLX 455
Query: 705 GSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
SL+N T LPLPNCFT+K LF T Q PGTVAI
Sbjct: 456 LSLLN*TXXLPLPNCFTKKXLFLFTISQXNCPGTVAI 566
Score = 23.5 bits (45), Expect(2) = 2e-024
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3 / +3
Query: 390 CLFFFLTPDLATWRLRYTELSLA 458
CL L PDLAT LSLA
Sbjct: 141 CLXLLLGPDLATLXPLLIALSLA 209
>emb|AL096692.1|F17A13 Arabidopsis thaliana clone F17A13, *** SEQUENCING IN PROGRESS ***
Length = 100310
Score = 102 bits (218), Expect(3) = 8e-049
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1 / -2
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG 665
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSG
Sbjct: 80020 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG 79856
Score = 84.9 bits (179), Expect(3) = 8e-049
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -1 / -2
Query: 667 GLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQV 500
GLANKKTVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV
Sbjct: 79624 GLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQV 79457
Score = 79.9 bits (168), Expect(3) = 1e-022
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +3 / +3
Query: 666 PECLKEWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PECL E ML RL SL+N TLALPLPNCFT+K+LF T QI PGTVAI
Sbjct: 79857 PECLYELMLTRLLLSLLN*TLALPLPNCFTKKQLFLFTISQINCPGTVAI 80006
Score = 65.7 bits (137), Expect(3) = 8e-049
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = -1 / -1
Query: 505 QVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
QV DNYYRPDL K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 78602 QVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA*RI 78474
Score = 53.8 bits (111), Expect(3) = 1e-022
Identities = 28/52 (53%), Positives = 29/52 (55%)
Frame = +3 / +3
Query: 513 TALAILRNSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKP 668
T L IL NS DL G FC LVLVV TT S A +VTVFL AKP
Sbjct: 79470 TTLLILENSFLRIDLLTESLGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKP 79625
Score = 30.9 bits (61), Expect(3) = 1e-022
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 390 CLFFFLTPDLATWRLRYTELSLARA 464
CLF L PDLAT R LSLA A
Sbjct: 78487 CLFLLLGPDLATLRPLLIALSLASA 78561
>gb|BP855931.1|BP855931 BP855931 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-E24 5',
mRNA sequence
Length = 410
Score = 124 bits (265), Expect(2) = 1e-048
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -1 / +3
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 27 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 206
Query: 649 TVTIQ 635
TVTIQ
Sbjct: 207 TVTIQ 221
Score = 95.0 bits (201), Expect(2) = 3e-027
Identities = 42/59 (71%), Positives = 46/59 (77%)
Frame = +3 / -2
Query: 639 IVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
+VTVFL AKPECL E ML RL SL+N TLALPLPNCFT+K+LF T QI PGTVAI
Sbjct: 217 MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNCFTKKQLFLFTISQINCPGTVAI 41
Score = 92.3 bits (195), Expect(2) = 1e-048
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -1 / +1
Query: 655 KKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPD 476
K+ +PA KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNY RPD
Sbjct: 202 KRQ*PFRPAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNY*RPD 381
Query: 475 LTKPALARL 449
L K ALARL
Sbjct: 382 LKKAALARL 408
Score = 49.6 bits (102), Expect(2) = 3e-027
Identities = 28/61 (45%), Positives = 35/61 (57%)
Frame = +2 / -3
Query: 449 QPSKSWLGQIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLGSREDHSRVLC 628
+PSK QIRP+VVV L+ ++ H ELL RLV R VL L LG E ++ VL
Sbjct: 408 KPSKCCFLQIRPLVVVHYLIGNNFTHPRELLLEDRLVNRELRLVLSLSLGGSEYNTLVLA 229
Query: 629 S 631
S
Sbjct: 228 S 226
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
Length = 198429
Score = 102 bits (218), Expect(3) = 3e-048
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1 / -2
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG 665
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSG
Sbjct: 198059 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG 197895
Score = 84.9 bits (179), Expect(3) = 3e-048
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -1 / -2
Query: 667 GLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQV 500
GLANKKTVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV
Sbjct: 197663 GLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQV 197496
Score = 79.9 bits (168), Expect(3) = 5e-022
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +3 / +1
Query: 666 PECLKEWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PECL E ML RL SL+N TLALPLPNCFT+K+LF T QI PGTVAI
Sbjct: 197896 PECLYELMLTRLLLSLLN*TLALPLPNCFTKKQLFLFTISQINCPGTVAI 198045
Score = 65.7 bits (137), Expect(3) = 3e-048
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = -1 / -1
Query: 505 QVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
QV DNYYRPDL K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 196641 QVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA*RI 196513
Score = 53.8 bits (111), Expect(3) = 5e-022
Identities = 28/52 (53%), Positives = 29/52 (55%)
Frame = +3 / +1
Query: 513 TALAILRNSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKP 668
T L IL NS DL G FC LVLVV TT S A +VTVFL AKP
Sbjct: 197509 TTLLILENSFLRIDLLTESLGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKP 197664
Score = 30.9 bits (61), Expect(3) = 5e-022
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +3 / +2
Query: 390 CLFFFLTPDLATWRLRYTELSLARA 464
CLF L PDLAT R LSLA A
Sbjct: 196526 CLFLLLGPDLATLRPLLIALSLASA 196600
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71
Length = 200001
Score = 102 bits (218), Expect(3) = 3e-048
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1 / -3
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG 665
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSG
Sbjct: 4630 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG 4466
Score = 84.9 bits (179), Expect(3) = 3e-048
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -1 / -3
Query: 667 GLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQV 500
GLANKKTVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV
Sbjct: 4234 GLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQV 4067
Score = 79.9 bits (168), Expect(3) = 5e-022
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +3 / +3
Query: 666 PECLKEWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
PECL E ML RL SL+N TLALPLPNCFT+K+LF T QI PGTVAI
Sbjct: 4467 PECLYELMLTRLLLSLLN*TLALPLPNCFTKKQLFLFTISQINCPGTVAI 4616
Score = 65.7 bits (137), Expect(3) = 3e-048
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = -1 / -2
Query: 505 QVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
QV DNYYRPDL K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 3212 QVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA*RI 3084
Score = 53.8 bits (111), Expect(3) = 5e-022
Identities = 28/52 (53%), Positives = 29/52 (55%)
Frame = +3 / +3
Query: 513 TALAILRNSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKP 668
T L IL NS DL G FC LVLVV TT S A +VTVFL AKP
Sbjct: 4080 TTLLILENSFLRIDLLTESLGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKP 4235
Score = 30.9 bits (61), Expect(3) = 5e-022
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 390 CLFFFLTPDLATWRLRYTELSLARA 464
CLF L PDLAT R LSLA A
Sbjct: 3097 CLFLLLGPDLATLRPLLIALSLASA 3171
>gb|AV531508.1|AV531508 AV531508 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB024e01F 3', mRNA sequence
Length = 521
Score = 186 bits (401), Expect = 8e-046
Identities = 82/130 (63%), Positives = 100/130 (76%)
Frame = -1 / -1
Query: 766 NSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLSTTKTK 587
N FLVKQFG G AKVQF+KE NNL NI+S+KHSGLA+KKTVTIQ A KD VVL T K K
Sbjct: 521 NCFLVKQFGRGYAKVQFSKESNNLVNINSYKHSGLASKKTVTIQAAGKDQGVVLGTAKAK 342
Query: 586 KQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVYLSLQVAKSGV 407
+QN P +KS+++KEF +M+K V NQV N YRPDL K ALARLS++ L+VAKSG
Sbjct: 341 RQNKPKLSVNKSILKKEFSRMSKVVANQVVVN*YRPDLKKAALARLSAISKGLRVAKSGP 162
Query: 406 KKKNRQS*AL 377
K++NRQ+* +
Sbjct: 161 KRRNRQA*RI 132
Score = 119 bits (254), Expect = 2e-025
Identities = 64/125 (51%), Positives = 68/125 (54%)
Frame = +3 / +1
Query: 390 CLFFFLTPDLATWRLRYTELSLARAXXXXXXXXXXXXTWFFTALAILRNSLRITDLWLSF 569
CLF L PDLAT R LSLA A T T L IL NS DL
Sbjct: 145 CLFLLLGPDLATLRPLLIALSLASAAFFKSGLY*LTTT*LATTLLILENSFLRIDLLTES 324
Query: 570 AGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNC 749
G FC L L V TT S A +VTVFL AKPECL E ML RL SL+N TLA PLPNC
Sbjct: 325 LGLFCLLALAVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTRLLLSLLN*TLA*PLPNC 504
Query: 750 FTRKE 764
FT+K+
Sbjct: 505 FTKKQ 519
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 102 bits (218), Expect(3) = 1e-044
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1 / -1
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG 665
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSG
Sbjct: 10382755 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG 10382591
Score = 84.9 bits (179), Expect(3) = 1e-044
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -1 / -1
Query: 667 GLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQV 500
GLANKKTVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V NQV
Sbjct: 10382359 GLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQV 10382192
Score = 65.7 bits (137), Expect(3) = 1e-044
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = -1 / -3
Query: 505 QVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
QV DNYYRPDL K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 10381337 QVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA*RI 10381209
>gb|BP856131.1|BP856131 BP856131 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-P09 5',
mRNA sequence
Length = 404
Score = 180 bits (388), Expect = 5e-044
Identities = 74/114 (64%), Positives = 90/114 (78%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATV G LIW++V+ N FLVK+FG GN+KVQ +KE NNL N +S+KHSG+ANKKTVT+
Sbjct: 57 EMATVQGQLIWEIVKNKNCFLVKEFGRGNSKVQLSKETNNLTNAYSYKHSGVANKKTVTM 236
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPD 476
Q KD AVVL+TTKTKKQN P KS+++KEF +M+KAV NQV DNYYR D
Sbjct: 237 QAGEKDQAVVLATTKTKKQNKPKLSVKKSILKKEFPRMSKAVANQVVDNYYRRD 398
Score = 116 bits (249), Expect = 7e-025
Identities = 58/105 (55%), Positives = 63/105 (60%)
Frame = +3 / -2
Query: 501 TWFFTALAILRNSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLK 680
TW TA IL NS D G FCFLV VV TTA SF+ +VTVFLFA PECL
Sbjct: 373 TWLATAFDILGNSFLRIDFLTESLGLFCFLVFVVASTTAWSFSPACMVTVFLFATPECL* 194
Query: 681 EWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
E L RL SL+N TL PLPN FT+K+ F T QI P TVAI
Sbjct: 193 E*ALVRLLVSLLN*TLEFPLPNSFTKKQFLFFTISQINCP*TVAI 59
>gb|AA042137.1|AA042137 24474 CD4-13 Arabidopsis thaliana cDNA clone E2H7T7, mRNA sequence
Length = 587
Score = 178 bits (383), Expect = 2e-043
Identities = 73/104 (70%), Positives = 87/104 (83%)
Frame = -1 / +2
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 23 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 202
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKN 506
Q A KD AVVL+TTKTKKQN P +KS+++K F +M+KAV N
Sbjct: 203 QAADKDQAVVLATTKTKKQNKPKLSVNKSILKKGFPRMSKAVAN 334
Score = 129 bits (277), Expect = 1e-028
Identities = 61/101 (60%), Positives = 67/101 (66%)
Frame = +3 / -3
Query: 513 TALAILRNSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML 692
TA IL N DL G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L
Sbjct: 327 TAFDILGNPFLRIDLLTESLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TL 148
Query: 693 *RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
RL SL+N TL PLPNCFT+K+L F T QI PGTVAI
Sbjct: 147 VRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGTVAI 25
>gb|BP796967.1|BP796967 BP796967 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-01-J10 5',
mRNA sequence
Length = 391
Score = 166 bits (356), Expect(2) = 3e-043
Identities = 67/95 (70%), Positives = 79/95 (83%)
Frame = -1 / +2
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NL N+HS+KHSGLANKKTVTI
Sbjct: 56 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETKNLTNVHSYKHSGLANKKTVTI 235
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEF 533
Q A KD AVVL+TTKTKKQN P +K +++KEF
Sbjct: 236 QAADKDQAVVLATTKTKKQNKPKLFVNKFILKKEF 340
Score = 122 bits (260), Expect = 2e-026
Identities = 56/94 (59%), Positives = 63/94 (67%)
Frame = +3 / -2
Query: 534 NSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSL 713
NS +L G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L R SL
Sbjct: 339 NSFLRINLLTKSLGLFCFLVLVVASTTAWSLSAAWMVTVFLFARPECL*E*TLVRFLVSL 160
Query: 714 VNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
+N TL PLPNCFT+K+L F T QI PGTVAI
Sbjct: 159 LN*TLEFPLPNCFTKKQLLFFTISQINCPGTVAI 58
Score = 32.2 bits (64), Expect(2) = 3e-043
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1 / +1
Query: 529 KMAKAVKNQVSDNYYR 482
+M+KAV NQV DNYYR
Sbjct: 343 RMSKAVANQVVDNYYR 390
>gb|BP863424.1|BP863424 BP863424 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-66-K15 5',
mRNA sequence
Length = 412
Score = 123 bits (264), Expect(2) = 2e-041
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 57 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 236
Query: 637 Q 635
Q
Sbjct: 237 Q 239
Score = 93.2 bits (197), Expect(2) = 2e-025
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = +3 / -1
Query: 636 WIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
W+VTVFLFA+PECL E L RL SL+N TL PLPNCFT+K+L F T QI PGTVAI
Sbjct: 238 WMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGTVAI 59
Score = 68.4 bits (143), Expect(2) = 2e-041
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = -1 / +2
Query: 601 TTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTK 467
TTKTKKQN P KS+++KEF +M+KAV NQV DNY RPDL K
Sbjct: 275 TTKTKKQNKPKLSVKKSILKKEFPRMSKAVANQVVDNY*RPDLKK 409
Score = 45.1 bits (92), Expect(2) = 2e-025
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +2 / -1
Query: 473 QIRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLGLG 598
Q+RP+VVV +LV +SL H E L RL R VLLLGLG
Sbjct: 403 QVRPLVVVHHLVSNSL*HPGEFLLEDRLFDRELRLVLLLGLG 278
>gb|BP814878.1|BP814878 BP814878 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-37-C10 5',
mRNA sequence
Length = 391
Score = 168 bits (361), Expect = 3e-040
Identities = 68/99 (68%), Positives = 82/99 (82%)
Frame = -1 / +2
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG LIW++V++NN FLVKQFG GNAKVQF+KE NNL NI+S+KHSGLANKK
Sbjct: 95 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 274
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEF 533
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF
Sbjct: 275 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEF 391
Score = 122 bits (262), Expect = 1e-026
Identities = 59/94 (62%), Positives = 63/94 (67%)
Frame = +3 / -2
Query: 534 NSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSL 713
NS DL G FC LVLVV TT SF A +VTVFL AKPECL E ML RL SL
Sbjct: 390 NSFLRIDLLTESLGLFCLLVLVVPSTTPWSFPAA*MVTVFLLAKPECLYELMLTRLLLSL 211
Query: 714 VNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
+N TLALPLPNCFT+K+LF T QI PGTVAI
Sbjct: 210 LN*TLALPLPNCFTKKQLFLFTISQINCPGTVAI 109
>gb|T22823.1|T22823 4831 Lambda-PRL2 Arabidopsis thaliana cDNA clone 107I10T7, mRNA
sequence
Length = 489
Score = 166 bits (358), Expect = 7e-040
Identities = 68/100 (68%), Positives = 80/100 (80%)
Frame = -1 / +2
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 32 EMATVPGQLIWEIVKNNNXFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 211
Query: 637 QPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAK 518
Q A KD AVVL TTKTKKQN P +K +++K F + K
Sbjct: 212 QAADKDQAVVLXTTKTKKQNKPKLSFNKXILKKGFPQXVK 331
Score = 120 bits (257), Expect = 6e-026
Identities = 54/81 (66%), Positives = 59/81 (72%)
Frame = +3 / -1
Query: 573 GAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNCF 752
G FCFLVLVV TTA S +A W+VTVFLFA+PECL E L RL SL+N TL PLPNCF
Sbjct: 276 GLFCFLVLVVXXTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNCF 97
Query: 753 TRKELFFLTTCQIRSPGTVAI 815
T+K L F T QI PGTVAI
Sbjct: 96 TKKXLLFXTISQINCPGTVAI 34
>gb|BP865812.1|BP865812 BP865812 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-75-I09 5',
mRNA sequence
Length = 379
Score = 165 bits (354), Expect = 2e-039
Identities = 67/104 (64%), Positives = 83/104 (79%)
Frame = -1 / +1
Query: 829 LRRREMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKK 650
++ EMATVPG IW++V++NN F VKQFG GNAKVQF+K NNL NI+S+KHSGLANKK
Sbjct: 67 VKELEMATVPGQWIWEIVKRNNCFWVKQFGRGNAKVQFSKGSNNLVNINSYKHSGLANKK 246
Query: 649 TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAK 518
TVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K
Sbjct: 247 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSK 378
Score = 122 bits (261), Expect = 2e-026
Identities = 60/99 (60%), Positives = 64/99 (64%)
Frame = +3 / -3
Query: 519 LAILRNSLRITDLWLSFAGAFCFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*R 698
L IL NS DL G FC LVLVV TT S A +VTVFL AKPECL E ML R
Sbjct: 377 LLILENSFLRIDLLTESLGLFCLLVLVVPSTTPWSLPAA*MVTVFLLAKPECLYELMLTR 198
Query: 699 LFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSPGTVAI 815
L L+N TLALPLPNCFT+K+LF T QI PGTVAI
Sbjct: 197 LLLPLLN*TLALPLPNCFTQKQLFLFTISQIHCPGTVAI 81
>gb|AV544976.1|AV544976 AV544976 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ66c10F 3', mRNA sequence
Length = 469
Score = 159 bits (342), Expect = 1e-037
Identities = 68/105 (64%), Positives = 84/105 (80%)
Frame = -1 / -3
Query: 691 NIHSFKHSGLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAV 512
NI+S+KHSGLANKKTVTIQ A KD VVL TTKTK+QN P +KS+++KEF +M+K V
Sbjct: 467 NINSYKHSGLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVV 288
Query: 511 KNQVSDNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS*AL 377
NQV DNYYRPDL K ALARLS++ L+VAKSG K++NRQ+* +
Sbjct: 287 ANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA*RI 153
>gb|BP842751.1|BP842751 BP842751 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-55-N20 5',
mRNA sequence
Length = 380
Score = 127 bits (273), Expect(2) = 6e-037
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = -1 / +1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 61 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 240
Query: 637 QPAAKD 620
Q KD
Sbjct: 241 QAGEKD 258
Score = 97.7 bits (207), Expect(2) = 1e-024
Identities = 42/65 (64%), Positives = 48/65 (73%)
Frame = +3 / -1
Query: 621 SFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNCFTRKELFFLTTCQIRSP 800
SF+ W+VTVFLFA+PECL E L RL SL+N TL PLPNCFT+K+L F T QI P
Sbjct: 257 SFSPAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCP 78
Query: 801 GTVAI 815
GTVAI
Sbjct: 77 GTVAI 63
Score = 49.2 bits (101), Expect(2) = 6e-037
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -1 / +2
Query: 598 TKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQV 500
TKTKKQN P +KS+++KEF +M+KAV NQV
Sbjct: 278 TKTKKQNKPKLSVNKSILKKEFPRMSKAVANQV 376
Score = 38.2 bits (77), Expect(2) = 1e-024
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = +3 / -3
Query: 501 TWFFTALAILRNSLRITDLWLSFAGAFCFLVLV 599
TW TA IL NS DL G FCFLVLV
Sbjct: 375 TWLATAFDILGNSFLRIDLLTESLGLFCFLVLV 277
>gb|BP860079.1|BP860079 BP860079 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-42-P20 5',
mRNA sequence
Length = 395
Score = 145 bits (311), Expect(2) = 8e-037
Identities = 58/78 (74%), Positives = 68/78 (87%)
Frame = -1 / +1
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
EMATVPG LIW++V+ NN FLVKQFG GN+KVQF+KE NNL N+HS+KHSGLANKKTVTI
Sbjct: 52 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLSNVHSYKHSGLANKKTVTI 231
Query: 637 QPAAKDSAVVLSTTKTKK 584
Q KD AVVL+TTKT++
Sbjct: 232 QAGDKDQAVVLATTKTQE 285
Score = 106 bits (226), Expect(2) = 2e-028
Identities = 48/75 (64%), Positives = 54/75 (72%)
Frame = +3 / -1
Query: 591 VLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNCFTRKELF 770
VLVV TTA S + W+VTVFLFA+PECL E L RL SL+N TL PLPNCFT+K+L
Sbjct: 278 VLVVASTTAWSLSPAWMVTVFLFARPECL*E*TLLRLLVSLLN*TLEFPLPNCFTKKQLL 99
Query: 771 FLTTCQIRSPGTVAI 815
F T QI PGTVAI
Sbjct: 98 FFTISQINCPGTVAI 54
Score = 41.8 bits (85), Expect(2) = 2e-028
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +2 / -2
Query: 476 IRPVVVVTNLVFHSLGHLAELLAHHRLVAELRRCVLLLG 592
+RPVVVV +LV +SL H E L RLV R VLLLG
Sbjct: 394 VRPVVVVHHLVSNSL*HPGEFLLEDRLVDRELRLVLLLG 278
Score = 31.3 bits (62), Expect(2) = 8e-037
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / +1
Query: 590 QEAERTCEAQPQVCDAQGVPQDGQGCEKPG 501
QEAE+ QV +G+PQD +GC PG
Sbjct: 280 QEAEQA*ALCQQVYPQEGIPQDVKGCC*PG 369
>gb|AV534292.1|AV534292 AV534292 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB077g02F 3', mRNA sequence
Length = 403
Score = 151 bits (325), Expect = 2e-035
Identities = 67/101 (66%), Positives = 82/101 (81%)
Frame = -1 / -1
Query: 676 KHSGLANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVS 497
KHSGLANKKTVTIQ A KD AVVL+T+KTKKQN P +KS+++K+F +M+KAV NQV
Sbjct: 403 KHSGLANKKTVTIQAADKDQAVVLATSKTKKQNKPKLSVNKSILKKQFPRMSKAVANQVV 224
Query: 496 DNYYRPDLTKPALARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
DNYYRP L K ALARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 223 DNYYRPHLKKAALARLSAISKGLRVAKSGAKQRNRQA*ASS 101
>gb|BP597676.1|BP597676 BP597676 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-40-H08 3',
mRNA sequence
Length = 424
Score = 145 bits (312), Expect = 2e-033
Identities = 65/96 (67%), Positives = 78/96 (81%)
Frame = -1 / -2
Query: 661 ANKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYR 482
ANKKTVTIQ A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYR
Sbjct: 423 ANKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYR 244
Query: 481 PDLTKPALARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
PDL K ALARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 243 PDLKKAALARLSAISKGLRVAKSGAKQRNRQA*ASS 136
>gb|T44307.1|T44307 7570 Lambda-PRL2 Arabidopsis thaliana cDNA clone 123O19T7, mRNA
sequence
Length = 406
Score = 143 bits (307), Expect = 7e-033
Identities = 58/79 (73%), Positives = 66/79 (83%)
Frame = -1 / +1
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVPG LIW++V+ NN FLVKQFG GN+KVQF+K NNL N+HS+KHSGLANKKTVTIQ
Sbjct: 49 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKXTNNLTNVHSYKHSGLANKKTVTIQ 228
Query: 634 PAAKDSAVVLSTTKTKKQN 578
KD AVVL TTK KKQ+
Sbjct: 229 GXDKDQAVVLGTTKAKKQD 285
Score = 110 bits (235), Expect = 6e-023
Identities = 49/78 (62%), Positives = 55/78 (70%)
Frame = +3 / -3
Query: 582 CFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNCFTRK 761
CFL LVV TTA S + W+VTVFLFA+PECL E L RL L+N TL PLPNCFT+K
Sbjct: 281 CFLALVVPSTTAWSLSXPWMVTVFLFARPECL*E*TLVRLLVXLLN*TLEFPLPNCFTKK 102
Query: 762 ELFFLTTCQIRSPGTVAI 815
+L F T QI PGTVAI
Sbjct: 101 QLLFXTISQINCPGTVAI 48
>gb|H37001.1|H37001 15130 Lambda-PRL2 Arabidopsis thaliana cDNA clone 181H5T7, mRNA
sequence
Length = 355
Score = 142 bits (304), Expect = 2e-032
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = -1 / +3
Query: 814 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQ 635
MATVPG LIW++V+ NN FLVKQFG GN+KVQF+K NNL N+HS+KHSGLANKKTVTIQ
Sbjct: 48 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKXTNNLTNVHSYKHSGLANKKTVTIQ 227
Query: 634 PAAKDSAVVLSTTKTKKQ 581
A KD AVVL TTKT Q
Sbjct: 228 AADKDQAVVLGTTKTXXQ 281
Score = 109 bits (233), Expect = 1e-022
Identities = 49/78 (62%), Positives = 55/78 (70%)
Frame = +3 / -1
Query: 582 CFLVLVVERTTAESFAAGWIVTVFLFAKPECLKEWML*RLFGSLVNCTLALPLPNCFTRK 761
C VLVV TTA S +A W+VTVFLFA+PECL E L RL L+N TL PLPNCFT+K
Sbjct: 280 CXXVLVVPSTTAWSLSAAWMVTVFLFARPECL*E*TLVRLLVXLLN*TLEFPLPNCFTKK 101
Query: 762 ELFFLTTCQIRSPGTVAI 815
+L F T QI PGTVAI
Sbjct: 100 QLLFXTISQINCPGTVAI 47
>gb|AV819301.1|AV819301 AV819301 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-03-J09 3',
mRNA sequence
Length = 421
Score = 141 bits (302), Expect = 4e-032
Identities = 63/95 (66%), Positives = 76/95 (80%)
Frame = -1 / -1
Query: 658 NKKTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRP 479
NKKTVTIQ A KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV D YYRP
Sbjct: 421 NKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDKYYRP 242
Query: 478 DLTKPALARLSSVYLSLQVAKSGVKKKNRQS*ALS 374
DL K ALARLS++ L+VAKSG K++NRQ+*A S
Sbjct: 241 DLKKAALARLSAISKGLRVAKSGAKQRNRQA*ASS 137
>gb|AA712884.1|AA712884 32443 Lambda-PRL2 Arabidopsis thaliana cDNA clone 200J13T7, mRNA
sequence
Length = 243
Score = 134 bits (288), Expect = 3e-030
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = -1 / +3
Query: 817 EMATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTI 638
+MATVPG W++V+ NN F VKQFG GN+KVQF+KE NNL N+HS+KHSGLANK TVTI
Sbjct: 6 KMATVPGQXXWEIVKNNNCFXVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKXTVTI 185
Query: 637 QPAAKDSAVVLSTTKTKKQ 581
Q A K AVVL+T KTK+Q
Sbjct: 186 QAADKXQAVVLATXKTKRQ 242
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,932,691,366
Number of Sequences: 1013581
Number of extensions: 28047517
Number of successful extensions: 172545
Number of sequences better than 1.0e-020: 68
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 61308718746
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)