BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCM14d12.yg.2.1
(593 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BT009139.1| Triticum aestivum clone wl1n.pk0044.b1:fis, ... 72 5e-011
gb|BQ294855.1|BQ294855 WHE2855_B10_C19ZS Wheat unstressed r... 46 0.003
gb|AL818862.1|AL818862 AL818862 l:125 Triticum aestivum cDN... 46 0.003
gb|BQ803259.1|BQ803259 WHE2835_E12_J23ZS Triticum monococcu... 46 0.003
gb|CA629496.1|CA629496 wle1n.pk0025.b1 wle1n Triticum aesti... 46 0.003
gb|BE406907.1|BE406907 WHE0433_f04_k07zS Wheat etiolated se... 44 0.011
gb|BI479617.1|BI479617 WHE3456_A05_A10ZS Wheat pre-anthesis... 44 0.011
gb|BJ277746.1|BJ277746 BJ277746 Y. Ogihara unpublished cDNA... 44 0.011
gb|BQ620630.1|BQ620630 TaLr1138D03R TaLr1 Triticum aestivum... 44 0.011
gb|BU100946.1|BU100946 WHE3359_G05_M09ZS Chinese Spring alu... 44 0.011
gb|BJ225711.1|BJ225711 BJ225711 Y. Ogihara unpublished cDNA... 44 0.011
gb|CD880265.1|CD880265 F1.001D08F001129 F1 Triticum aestivu... 44 0.011
gb|CD897626.1|CD897626 G174.106I23F010823 G174 Triticum aes... 44 0.011
gb|CK157933.1|CK157933 FGAS039133 Triticum aestivum FGAS: T... 44 0.011
gb|AL809566.1|AL809566 AL809566 a:11 Triticum aestivum cDNA... 44 0.011
gb|CV781230.1|CV781230 FGAS075641 Triticum aestivum FGAS: L... 44 0.011
gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis... 44 0.011
dbj|AB158407.1| Triticum aestivum CesA mRNA for putative ce... 44 0.011
gb|BE422779.1|BE422779 WHE0014_H09_H09ZS Wheat endosperm cD... 42 0.043
gb|CV764091.1|CV764091 FGAS058474 Triticum aestivum FGAS: L... 42 0.043
gb|DR735602.1|DR735602 FGAS015452 Triticum aestivum FGAS: L... 42 0.043
gb|BE406582.1|BE406582 WHE0418_f11_k22zB Wheat etiolated se... 40 0.17
gb|BE415973.1|BE415973 MUG003.A02R990520 ITEC MUG Wheat Spi... 40 0.17
gb|BE417040.1|BE417040 MUG016.A02R990620 ITEC MUG Wheat Spi... 40 0.17
gb|BE492013.1|BE492013 WHE0555_G03_G03ZE Triticum monococcu... 40 0.17
gb|BJ250138.1|BJ250138 BJ250138 Y. Ogihara unpublished cDNA... 40 0.17
gb|BJ262322.1|BJ262322 BJ262322 Y. Ogihara unpublished cDNA... 40 0.17
gb|BJ268234.1|BJ268234 BJ268234 Y. Ogihara unpublished cDNA... 40 0.17
gb|BJ273161.1|BJ273161 BJ273161 Y. Ogihara unpublished cDNA... 40 0.17
gb|BQ162314.1|BQ162314 WHE0764_F10_K20ZT Wheat heat-stresse... 40 0.17
gb|BQ609073.1|BQ609073 BRY_4992 wheat EST endosperm library... 40 0.17
gb|BQ744364.1|BQ744364 WHE4114_G02_M04ZS Wheat salt-stresse... 40 0.17
gb|BU100349.1|BU100349 WHE3352_C02_E04ZS Chinese Spring alu... 40 0.17
gb|CD873505.1|CD873505 AZO3.100A11R011122 AZO3 Triticum aes... 40 0.17
gb|CD937160.1|CD937160 OV.106D03F010202 OV Triticum aestivu... 40 0.17
gb|CK157570.1|CK157570 FGAS038712 Triticum aestivum FGAS: T... 40 0.17
gb|AJ610821.1|AJ610821 AJ610821 Triticum turgidum subsp. du... 40 0.17
gb|AJ610836.1|AJ610836 AJ610836 Triticum turgidum subsp. du... 40 0.17
>gb|BT009139.1| Triticum aestivum clone wl1n.pk0044.b1:fis, full insert mRNA
sequence
Length = 1157
Score = 71.9 bits (36), Expect = 5e-011
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 459 tgcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaac 518
||||||||| ||||||||||||||||||||||| || ||||||||| | || || |||||
Sbjct: 766 tgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaac 707
Query: 519 aggataat 526
|||||||
Sbjct: 706 cggataat 699
Score = 42.1 bits (21), Expect = 0.043
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 280 accttaaattcttcgtattctctcttcat 308
||||| ||||| |||||||||||||||||
Sbjct: 945 accttgaattcctcgtattctctcttcat 917
>gb|BQ294855.1|BQ294855 WHE2855_B10_C19ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2855_B10_C19, mRNA sequence
Length = 731
Score = 46.1 bits (23), Expect = 0.003
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 409 ttcttacagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaa 468
||||||||||| ||||||||||| ||||||| | ||||||| | | | |||| ||
Sbjct: 708 ttcttacagaaaggaacccatttctttgcaaattcagatgtttcagacaatccttcgaat 649
Query: 469 gtaagcattgcagcaccatcatccgacacatagca 503
|| ||||| |||||||||||||| || ||||||||
Sbjct: 648 gtcagcatggcagcaccatcatcagaaacatagca 614
>gb|AL818862.1|AL818862 AL818862 l:125 Triticum aestivum cDNA clone B12_l125_plate_4, mRNA
sequence
Length = 357
Score = 46.1 bits (23), Expect = 0.003
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 409 ttcttacagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaa 468
||||||||||| ||||||||||| ||||||| | ||||||| | | | |||| ||
Sbjct: 175 ttcttacagaaaggaacccatttctttgcaaattcagatgtttcagacaatccttcgaat 116
Query: 469 gtaagcattgcagcaccatcatccgacacatagca 503
|| ||||| |||||||||||||| || ||||||||
Sbjct: 115 gtcagcatggcagcaccatcatcagaaacatagca 81
>gb|BQ803259.1|BQ803259 WHE2835_E12_J23ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2835_E12_J23, mRNA
sequence
Length = 701
Score = 46.1 bits (23), Expect = 0.003
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 409 ttcttacagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaa 468
||||||||||| ||||||||||| ||||||| | ||||||| | | | |||| ||
Sbjct: 544 ttcttacagaaaggaacccatttctttgcaaattcagatgtttcagacaatccttcgaat 485
Query: 469 gtaagcattgcagcaccatcatccgacacatagca 503
|| ||||| |||||||||||||| || ||||||||
Sbjct: 484 gtcagcatggcagcaccatcatcagaaacatagca 450
>gb|CA629496.1|CA629496 wle1n.pk0025.b1 wle1n Triticum aestivum cDNA clone wle1n.pk0025.b1
5' end, mRNA sequence
Length = 533
Score = 46.1 bits (23), Expect = 0.003
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 409 ttcttacagaagggaacccattttcgtgcaaatagacatgtttctgtaagtgcttcaaaa 468
||||||||||| ||||||||||| ||||||| | ||||||| | | | |||| ||
Sbjct: 144 ttcttacagaaaggaacccatttctttgcaaattcagatgtttcagacaatccttcgaat 203
Query: 469 gtaagcattgcagcaccatcatccgacacatagca 503
|| ||||| |||||||||||||| || ||||||||
Sbjct: 204 gtcagcatggcagcaccatcatcagaaacatagca 238
>gb|BE406907.1|BE406907 WHE0433_f04_k07zS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0433_f04_k07, mRNA
sequence
Length = 383
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 271 ttaaattcttcatattctctcttcat 246
>gb|BI479617.1|BI479617 WHE3456_A05_A10ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3456_A05_A10, mRNA sequence
Length = 372
Score = 44.1 bits (22), Expect = 0.011
Identities = 73/90 (81%)
Strand = Plus / Minus
Query: 39 caatgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtga 98
||||||||||| ||||||||| || || ||||| | || || |||| ||| || | |||
Sbjct: 302 caatgcattcatggcaccagccttcttgtgatggttatagcctggccgtttttctcttga 243
Query: 99 aacatagaccaaccaaggcagcttatttcc 128
|||||| ||||| | |||||||| ||||||
Sbjct: 242 aacataaaccaatcgaggcagctcatttcc 213
>gb|BJ277746.1|BJ277746 BJ277746 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr12n18 5', mRNA sequence
Length = 661
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 333 ttaaattcttcatattctctcttcat 308
>gb|BQ620630.1|BQ620630 TaLr1138D03R TaLr1 Triticum aestivum cDNA clone TaLr1138D03R, mRNA
sequence
Length = 712
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 357 ttaaattcttcatattctctcttcat 332
>gb|BU100946.1|BU100946 WHE3359_G05_M09ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3359_G05_M09,
mRNA sequence
Length = 695
Score = 44.1 bits (22), Expect = 0.011
Identities = 73/90 (81%)
Strand = Plus / Minus
Query: 39 caatgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtga 98
||||||||||| ||||||||| || || ||||| | || || |||| ||| || | |||
Sbjct: 99 caatgcattcatggcaccagccttcttgtgatggttatagcctggccgtttttctcttga 40
Query: 99 aacatagaccaaccaaggcagcttatttcc 128
|||||| ||||| | |||||||| ||||||
Sbjct: 39 aacataaaccaatcgaggcagctcatttcc 10
>gb|BJ225711.1|BJ225711 BJ225711 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl23h08 5', mRNA sequence
Length = 544
Score = 44.1 bits (22), Expect = 0.011
Identities = 73/90 (81%)
Strand = Plus / Minus
Query: 39 caatgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtga 98
||||||||||| ||||||||| || || ||||| | || || |||| ||| || | |||
Sbjct: 238 caatgcattcatggcaccagccttcttgtgatggttatagcctggccgtttttctcttga 179
Query: 99 aacatagaccaaccaaggcagcttatttcc 128
|||||| ||||| | |||||||| ||||||
Sbjct: 178 aacataaaccaatcgaggcagctcatttcc 149
>gb|CD880265.1|CD880265 F1.001D08F001129 F1 Triticum aestivum cDNA clone F1001D08, mRNA
sequence
Length = 694
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 467 ttaaattcttcatattctctcttcat 442
>gb|CD897626.1|CD897626 G174.106I23F010823 G174 Triticum aestivum cDNA clone G174106I23,
mRNA sequence
Length = 468
Score = 44.1 bits (22), Expect = 0.011
Identities = 73/90 (81%)
Strand = Plus / Minus
Query: 39 caatgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtga 98
||||||||||| ||||||||| || || ||||| | || || |||| ||| || | |||
Sbjct: 215 caatgcattcatggcaccagccttcttgtgatggttatagcctggccgtttttctcttga 156
Query: 99 aacatagaccaaccaaggcagcttatttcc 128
|||||| ||||| | |||||||| ||||||
Sbjct: 155 aacataaaccaatcgaggcagctcatttcc 126
>gb|CK157933.1|CK157933 FGAS039133 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 882
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 242 ttaaattcttcatattctctcttcat 217
>gb|AL809566.1|AL809566 AL809566 a:11 Triticum aestivum cDNA clone A07_a11_plate_5, mRNA
sequence
Length = 589
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 117 ttaaattcttcatattctctcttcat 92
>gb|CV781230.1|CV781230 FGAS075641 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 871
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 304 ttaaattcttcatattctctcttcat 279
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA
sequence
Length = 3626
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 1450 ttaaattcttcatattctctcttcat 1425
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete
cds
Length = 3681
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 283 ttaaattcttcgtattctctcttcat 308
||||||||||| ||||||||||||||
Sbjct: 1476 ttaaattcttcatattctctcttcat 1451
>gb|BE422779.1|BE422779 WHE0014_H09_H09ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0014_H09_H09, mRNA sequence
Length = 584
Score = 42.1 bits (21), Expect = 0.043
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 496 acatagcagcaaactttatca 516
|||||||||||||||||||||
Sbjct: 57 acatagcagcaaactttatca 77
>gb|CV764091.1|CV764091 FGAS058474 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 826
Score = 42.1 bits (21), Expect = 0.043
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 496 acatagcagcaaactttatca 516
|||||||||||||||||||||
Sbjct: 715 acatagcagcaaactttatca 695
>gb|DR735602.1|DR735602 FGAS015452 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1041
Score = 42.1 bits (21), Expect = 0.043
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 496 acatagcagcaaactttatca 516
|||||||||||||||||||||
Sbjct: 74 acatagcagcaaactttatca 54
>gb|BE406582.1|BE406582 WHE0418_f11_k22zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0418_f11_k22, mRNA
sequence
Length = 315
Score = 40.1 bits (20), Expect = 0.17
Identities = 50/60 (83%)
Strand = Plus / Minus
Query: 39 caatgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtga 98
||||||||||| |||||| ||||| || | ||||||| ||| || | ||||||||||||
Sbjct: 177 caatgcattcatggcacctgctttcttgttgtgatcatatcccggacgtttctcacgtga 118
>gb|BE415973.1|BE415973 MUG003.A02R990520 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG003.A02, mRNA sequence
Length = 585
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 307 agcttatttccagcatcatc 288
>gb|BE417040.1|BE417040 MUG016.A02R990620 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG016.A02, mRNA sequence
Length = 450
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 307 agcttatttccagcatcatc 288
>gb|BE492013.1|BE492013 WHE0555_G03_G03ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0555_G03_G03, mRNA
sequence
Length = 470
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 285 agcttatttccagcatcatc 266
>gb|BJ250138.1|BJ250138 BJ250138 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9e11 3', mRNA sequence
Length = 754
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 498 agcttatttccagcatcatc 517
>gb|BJ262322.1|BJ262322 BJ262322 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh18d22 3', mRNA sequence
Length = 365
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 280 agcttatttccagcatcatc 299
>gb|BJ268234.1|BJ268234 BJ268234 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15o04 5', mRNA sequence
Length = 659
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 546 agcttatttccagcatcatc 527
>gb|BJ273161.1|BJ273161 BJ273161 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15o04 3', mRNA sequence
Length = 775
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 509 agcttatttccagcatcatc 528
>gb|BQ162314.1|BQ162314 WHE0764_F10_K20ZT Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0764_F10_K20, mRNA
sequence
Length = 734
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 540 agcttatttccagcatcatc 559
>gb|BQ609073.1|BQ609073 BRY_4992 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 614
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 143 agcttatttccagcatcatc 124
>gb|BQ744364.1|BQ744364 WHE4114_G02_M04ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4114_G02_M04, mRNA sequence
Length = 657
Score = 40.1 bits (20), Expect = 0.17
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 472 agcattgcagcaccatcatccgacacatagca 503
||||| |||||||||||||| || ||||||||
Sbjct: 354 agcatggcagcaccatcatcagaaacatagca 323
>gb|BU100349.1|BU100349 WHE3352_C02_E04ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3352_C02_E04,
mRNA sequence
Length = 705
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 121 ttatttccagcatcatccat 140
||||||||||||||||||||
Sbjct: 141 ttatttccagcatcatccat 122
>gb|CD873505.1|CD873505 AZO3.100A11R011122 AZO3 Triticum aestivum cDNA clone AZO3100A11,
mRNA sequence
Length = 708
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 350 agcttatttccagcatcatc 369
>gb|CD937160.1|CD937160 OV.106D03F010202 OV Triticum aestivum cDNA clone OV106D03, mRNA
sequence
Length = 469
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 59 agcttatttccagcatcatc 40
>gb|CK157570.1|CK157570 FGAS038712 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 854
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 675 agcttatttccagcatcatc 694
>gb|AJ610821.1|AJ610821 AJ610821 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 03582R, mRNA
sequence
Length = 531
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 339 agcttatttccagcatcatc 320
>gb|AJ610836.1|AJ610836 AJ610836 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 03604R, mRNA
sequence
Length = 707
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agcttatttccagcatcatc 137
||||||||||||||||||||
Sbjct: 338 agcttatttccagcatcatc 319
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 94,668
Number of Sequences: 636343
Number of extensions: 94668
Number of successful extensions: 24589
Number of sequences better than 0.5: 38
Number of HSP's better than 0.5 without gapping: 34
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 24543
Number of HSP's gapped (non-prelim): 50
length of query: 593
length of database: 367,240,239
effective HSP length: 19
effective length of query: 574
effective length of database: 355,149,722
effective search space: 203855940428
effective search space used: 203855940428
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)