BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCL24b11.yg.2.1
(520 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ285607.1|BJ285607 BJ285607 Y. Ogihara unpublished cDNA... 90 2e-016
gb|CA653560.1|CA653560 wre1n.pk187.e2 wre1n Triticum aestiv... 90 2e-016
gb|BJ258788.1|BJ258788 BJ258788 Y. Ogihara unpublished cDNA... 82 4e-014
gb|BJ264884.1|BJ264884 BJ264884 Y. Ogihara unpublished cDNA... 82 4e-014
gb|CA595818.1|CA595818 wpa1c.pk011.l24 wpa1c Triticum aesti... 82 4e-014
gb|CD878488.1|CD878488 AZO4.102O04F010930 AZO4 Triticum aes... 82 4e-014
gb|CD878489.1|CD878489 AZO4.102O04R011126 AZO4 Triticum aes... 82 4e-014
gb|CV770648.1|CV770648 FGAS065041 Triticum aestivum FGAS: L... 82 4e-014
gb|BG607099.1|BG607099 WHE2489_D02_H03ZS Triticum monococcu... 74 1e-011
gb|CA626078.1|CA626078 wl1n.pk0138.f2 wl1n Triticum aestivu... 74 1e-011
gb|BJ261450.1|BJ261450 BJ261450 Y. Ogihara unpublished cDNA... 64 1e-008
gb|BJ261460.1|BJ261460 BJ261460 Y. Ogihara unpublished cDNA... 64 1e-008
gb|BJ281159.1|BJ281159 BJ281159 Y. Ogihara unpublished cDNA... 64 1e-008
gb|CV777304.1|CV777304 FGAS071709 Triticum aestivum FGAS: L... 64 1e-008
gb|BJ230234.1|BJ230234 BJ230234 Y. Ogihara unpublished cDNA... 62 4e-008
gb|BJ250123.1|BJ250123 BJ250123 Y. Ogihara unpublished cDNA... 62 4e-008
gb|BJ250126.1|BJ250126 BJ250126 Y. Ogihara unpublished cDNA... 62 4e-008
gb|BJ261656.1|BJ261656 BJ261656 Y. Ogihara unpublished cDNA... 62 4e-008
gb|CK202624.1|CK202624 FGAS011149 Triticum aestivum FGAS: L... 62 4e-008
gb|CK202922.1|CK202922 FGAS011448 Triticum aestivum FGAS: L... 62 4e-008
gb|CV767146.1|CV767146 FGAS061533 Triticum aestivum FGAS: L... 62 4e-008
gb|BG606306.1|BG606306 WHE2959_C09_E17ZS Wheat dormant embr... 58 6e-007
gb|BI751378.1|BI751378 Ta01_16h11_R Ta01_AAFC_ECORC_Fusariu... 58 6e-007
gb|BQ483336.1|BQ483336 WHE3507_D04_H07ZS Wheat unstressed r... 58 6e-007
gb|AL828184.1|AL828184 AL828184 p:436 Triticum aestivum cDN... 58 6e-007
gb|AL829321.1|AL829321 AL829321 q:141 Triticum aestivum cDN... 58 6e-007
gb|CA502290.1|CA502290 WHE4045_E03_I05ZT Wheat meiotic anth... 58 6e-007
gb|CD454239.1|CD454239 WHE1759-1762_N16_N16ZT CS wheat pre-... 58 6e-007
gb|CD885769.1|CD885769 G118.100G10F010423 G118 Triticum aes... 58 6e-007
gb|CD885770.1|CD885770 G118.100G10R010921 G118 Triticum aes... 58 6e-007
gb|CD887966.1|CD887966 G118.106L09R010925 G118 Triticum aes... 58 6e-007
gb|CD904172.1|CD904172 G356.112K17F010919 G356 Triticum aes... 58 6e-007
gb|CK152713.1|CK152713 FGAS035787 Triticum aestivum FGAS: T... 58 6e-007
gb|CK152762.1|CK152762 FGAS035837 Triticum aestivum FGAS: T... 58 6e-007
gb|CK164582.1|CK164582 FGAS048496 Triticum aestivum FGAS: T... 58 6e-007
gb|CF569151.1|CF569151 EST012 Subtracted, Clontech (cat. # ... 58 6e-007
gb|CA604674.1|CA604674 wr1.pk0043.d4 wr1 Triticum aestivum ... 56 2e-006
gb|CV765988.1|CV765988 FGAS060375 Triticum aestivum FGAS: L... 54 1e-005
gb|BE470727.1|BE470727 WHE0279_F10_K19ZS Wheat drought-stre... 50 2e-004
gb|CD899782.1|CD899782 G174.113I13R011120 G174 Triticum aes... 46 0.002
gb|BE420153.1|BE420153 WWS020.G7R000101 ITEC WWS Wheat Scut... 44 0.009
gb|BQ171048.1|BQ171048 WHE2321_C11_E21ZT Wheat pre-anthesis... 44 0.009
gb|BQ789231.1|BQ789231 WHE4159_A11_A21ZS Wheat CS whole pla... 44 0.009
gb|BQ805050.1|BQ805050 WHE3562_C03_F06ZS Wheat developing g... 42 0.037
gb|CA644966.1|CA644966 wre1n.pk0085.f12 wre1n Triticum aest... 42 0.037
gb|CD925384.1|CD925384 G750.116O21F010709 G750 Triticum aes... 42 0.037
gb|CK197590.1|CK197590 FGAS006068 Triticum aestivum FGAS: L... 42 0.037
>gb|BJ285607.1|BJ285607 BJ285607 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr9b20 3', mRNA sequence
Length = 442
Score = 89.7 bits (45), Expect = 2e-016
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| |||||||| || |||||||||||||||||| ||||| ||||
Sbjct: 149 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagcttcccgaag 208
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 209 agcgggccccagg 221
>gb|CA653560.1|CA653560 wre1n.pk187.e2 wre1n Triticum aestivum cDNA clone wre1n.pk187.e2 5'
end, mRNA sequence
Length = 476
Score = 89.7 bits (45), Expect = 2e-016
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| |||||||| || |||||||||||||||||| ||||| ||||
Sbjct: 146 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagcttcccgaag 87
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 86 agcgggccccagg 74
>gb|BJ258788.1|BJ258788 BJ258788 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh9i17 5', mRNA sequence
Length = 559
Score = 81.8 bits (41), Expect = 4e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| |||||||| || |||||||||||||||||| ||||| || |
Sbjct: 454 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagcttcccaaag 395
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 394 agcgggccccagg 382
>gb|BJ264884.1|BJ264884 BJ264884 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh9i17 3', mRNA sequence
Length = 643
Score = 81.8 bits (41), Expect = 4e-014
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| |||||||| || |||||||||||||||||| ||||| || |
Sbjct: 296 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagcttcccaaag 355
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 356 agcgggccccagg 368
>gb|CA595818.1|CA595818 wpa1c.pk011.l24 wpa1c Triticum aestivum cDNA clone wpa1c.pk011.l24
5' end, mRNA sequence
Length = 609
Score = 81.8 bits (41), Expect = 4e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| |||||||| || |||||||||||||||||| ||||| || |
Sbjct: 442 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagcttcccaaag 383
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 382 agcgggccccagg 370
>gb|CD878488.1|CD878488 AZO4.102O04F010930 AZO4 Triticum aestivum cDNA clone AZO4102O04,
mRNA sequence
Length = 605
Score = 81.8 bits (41), Expect = 4e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| |||||||| || |||||||||||||||||| ||||| || |
Sbjct: 435 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagcttcccaaag 376
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 375 agcgggccccagg 363
>gb|CD878489.1|CD878489 AZO4.102O04R011126 AZO4 Triticum aestivum cDNA clone AZO4102O04,
mRNA sequence
Length = 770
Score = 81.8 bits (41), Expect = 4e-014
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| |||||||| || |||||||||||||||||| ||||| || |
Sbjct: 323 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagcttcccaaag 382
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 383 agcgggccccagg 395
>gb|CV770648.1|CV770648 FGAS065041 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 912
Score = 81.8 bits (41), Expect = 4e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| |||||||| || |||||||||||||||||| ||||| || |
Sbjct: 311 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagcttcccaaag 252
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 251 agcgggccccagg 239
>gb|BG607099.1|BG607099 WHE2489_D02_H03ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2489_D02_H03,
mRNA sequence
Length = 401
Score = 73.8 bits (37), Expect = 1e-011
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| |||||||| ||||||||| ||||| ||||
Sbjct: 169 cccttgaggaaggggtagagatggaggatgacccagatggagaagaagagctttccgaag 110
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 109 agcgggccccagg 97
>gb|CA626078.1|CA626078 wl1n.pk0138.f2 wl1n Triticum aestivum cDNA clone wl1n.pk0138.f2 5'
end, mRNA sequence
Length = 522
Score = 73.8 bits (37), Expect = 1e-011
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagctt 471
|||||||||||||||| |||||||| || |||||||||||||||||| |||||
Sbjct: 57 cccttgaggaacgggtagaggtggacgatgacccagaaggagaagaagagctt 5
>gb|BJ261450.1|BJ261450 BJ261450 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh2p20 3', mRNA sequence
Length = 643
Score = 63.9 bits (32), Expect = 1e-008
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 418 gcccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgag 477
||||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 337 gcccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaa 396
Query: 478 cagcgggcccca 489
|||||||||||
Sbjct: 397 gagcgggcccca 408
>gb|BJ261460.1|BJ261460 BJ261460 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh3a12 3', mRNA sequence
Length = 669
Score = 63.9 bits (32), Expect = 1e-008
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 418 gcccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgag 477
||||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 336 gcccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaa 395
Query: 478 cagcgggcccca 489
|||||||||||
Sbjct: 396 gagcgggcccca 407
>gb|BJ281159.1|BJ281159 BJ281159 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr20m08 5', mRNA sequence
Length = 549
Score = 63.9 bits (32), Expect = 1e-008
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 418 gcccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgag 477
||||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 130 gcccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaa 71
Query: 478 cagcgggcccca 489
|||||||||||
Sbjct: 70 gagcgggcccca 59
>gb|CV777304.1|CV777304 FGAS071709 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 841
Score = 63.9 bits (32), Expect = 1e-008
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 418 gcccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgag 477
||||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 567 gcccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaa 508
Query: 478 cagcgggcccca 489
|||||||||||
Sbjct: 507 gagcgggcccca 496
>gb|BJ230234.1|BJ230234 BJ230234 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl21o24 3', mRNA sequence
Length = 709
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 291 cccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaag 350
Query: 479 agcgggcccca 489
|||||||||||
Sbjct: 351 agcgggcccca 361
>gb|BJ250123.1|BJ250123 BJ250123 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9d16 3', mRNA sequence
Length = 690
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 413 cccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaag 472
Query: 479 agcgggcccca 489
|||||||||||
Sbjct: 473 agcgggcccca 483
>gb|BJ250126.1|BJ250126 BJ250126 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9d20 3', mRNA sequence
Length = 689
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 412 cccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaag 471
Query: 479 agcgggcccca 489
|||||||||||
Sbjct: 472 agcgggcccca 482
>gb|BJ261656.1|BJ261656 BJ261656 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh4a12 3', mRNA sequence
Length = 434
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 418 gcccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgag 477
||||||||||||||||| ||| || | || ||||| |||| |||||| ||||||||||
Sbjct: 297 gcccttgaggaacgggtagagatgcacgatcacccanaaggcgaagaanagcttgccgaa 356
Query: 478 cagcgggcccca 489
|||||||||||
Sbjct: 357 nagcgggcccca 368
>gb|CK202624.1|CK202624 FGAS011149 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 865
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 233 cccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaag 174
Query: 479 agcgggcccca 489
|||||||||||
Sbjct: 173 agcgggcccca 163
>gb|CK202922.1|CK202922 FGAS011448 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 888
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 233 cccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaag 174
Query: 479 agcgggcccca 489
|||||||||||
Sbjct: 173 agcgggcccca 163
>gb|CV767146.1|CV767146 FGAS061533 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 882
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| ||| || | || |||||||||| |||||| ||||||||||
Sbjct: 471 cccttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaag 412
Query: 479 agcgggcccca 489
|||||||||||
Sbjct: 411 agcgggcccca 401
>gb|BG606306.1|BG606306 WHE2959_C09_E17ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2959_C09_E17, mRNA sequence
Length = 402
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 199 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 140
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 139 agcgggccccagg 127
>gb|BI751378.1|BI751378 Ta01_16h11_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_16h11, mRNA
sequence
Length = 697
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 330 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 389
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 390 agcgggccccagg 402
>gb|BQ483336.1|BQ483336 WHE3507_D04_H07ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3507_D04_H07, mRNA sequence
Length = 580
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 247 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 188
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 187 agcgggccccagg 175
>gb|AL828184.1|AL828184 AL828184 p:436 Triticum aestivum cDNA clone B03_p436_plate_12, mRNA
sequence
Length = 621
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 446 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 387
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 386 agcgggccccagg 374
>gb|AL829321.1|AL829321 AL829321 q:141 Triticum aestivum cDNA clone C07_q141_plate_7, mRNA
sequence
Length = 571
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 488 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 429
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 428 agcgggccccagg 416
>gb|CA502290.1|CA502290 WHE4045_E03_I05ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4045_E03_I05, mRNA sequence
Length = 649
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 395 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 336
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 335 agcgggccccagg 323
>gb|CD454239.1|CD454239 WHE1759-1762_N16_N16ZT CS wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE1759-1762_N16_N16, mRNA
sequence
Length = 708
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 484 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 543
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 544 agcgggccccagg 556
>gb|CD885769.1|CD885769 G118.100G10F010423 G118 Triticum aestivum cDNA clone G118100G10,
mRNA sequence
Length = 533
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 352 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagcttcccgaag 293
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 292 agcgggccccagg 280
>gb|CD885770.1|CD885770 G118.100G10R010921 G118 Triticum aestivum cDNA clone G118100G10,
mRNA sequence
Length = 564
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 482 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagcttcccgaag 541
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 542 agcgggccccagg 554
>gb|CD887966.1|CD887966 G118.106L09R010925 G118 Triticum aestivum cDNA clone G118106L09,
mRNA sequence
Length = 606
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 462 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 521
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 522 agcgggccccagg 534
>gb|CD904172.1|CD904172 G356.112K17F010919 G356 Triticum aestivum cDNA clone G356112K17,
mRNA sequence
Length = 610
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 382 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 323
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 322 agcgggccccagg 310
>gb|CK152713.1|CK152713 FGAS035787 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 902
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 577 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 636
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 637 agcgggccccagg 649
>gb|CK152762.1|CK152762 FGAS035837 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 895
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 578 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 637
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 638 agcgggccccagg 650
>gb|CK164582.1|CK164582 FGAS048496 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 906
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 251 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 310
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 311 agcgggccccagg 323
>gb|CF569151.1|CF569151 EST012 Subtracted, Clontech (cat. # K1804-1) Triticum aestivum cDNA
clone FDC12 5' similar to Cellulose synthase-2 (CesA-2),
mRNA sequence
Length = 421
Score = 58.0 bits (29), Expect = 6e-007
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 119 cccttgaggaaggggtagagatggaggatcacccagatcgagaagaagagctttccgaag 60
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 59 agcgggccccagg 47
>gb|CA604674.1|CA604674 wr1.pk0043.d4 wr1 Triticum aestivum cDNA clone wr1.pk0043.d4 5'
end, mRNA sequence
Length = 500
Score = 56.0 bits (28), Expect = 2e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 422 ttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagcagc 481
||||||||||||| ||| || | || |||||||||| |||||| |||||||||| |||
Sbjct: 197 ttgaggaacgggtagagatgcacgatcacccagaaggcgaagaagagcttgccgaagagc 138
Query: 482 gggcccca 489
||||||||
Sbjct: 137 gggcccca 130
>gb|CV765988.1|CV765988 FGAS060375 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 974
Score = 54.0 bits (27), Expect = 1e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| ||| | | || |||||||||| |||||| ||||||||||
Sbjct: 538 cccttgaggaacgggtagagattcacgatcacccagaaggcgaagaagagcttgccgaag 479
Query: 479 agcgggcccca 489
|||||||||||
Sbjct: 478 agcgggcccca 468
>gb|BE470727.1|BE470727 WHE0279_F10_K19ZS Wheat drought-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0279_F10_K19, mRNA
sequence
Length = 557
Score = 50.1 bits (25), Expect = 2e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
||||||||||| |||| ||| || |||| ||||||| |||||||| ||||| ||||
Sbjct: 353 cccttgaggaaggggtagagatgcaggatcacccagatcgagaagaagagctttccgaag 294
Query: 479 agcgggccccagg 491
|||||||||||||
Sbjct: 293 agcgggccccagg 281
>gb|CD899782.1|CD899782 G174.113I13R011120 G174 Triticum aestivum cDNA clone G174113I13,
mRNA sequence
Length = 666
Score = 46.1 bits (23), Expect = 0.002
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| || |||| | |||||||||| |||||| ||||| ||||
Sbjct: 537 cccttgaggaacgggtaaagatggacaatcacccagaaggcgaagaagagcttcccgaag 596
Query: 479 agcgggcccca 489
|||||||||||
Sbjct: 597 agcgggcccca 607
>gb|BE420153.1|BE420153 WWS020.G7R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS020.G7, mRNA sequence
Length = 620
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 430 cgggtggaggtggaggacgacc 451
||||||||||||||||||||||
Sbjct: 268 cgggtggaggtggaggacgacc 289
>gb|BQ171048.1|BQ171048 WHE2321_C11_E21ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2321_C11_E21, mRNA sequence
Length = 605
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 430 cgggtggaggtggaggacgacc 451
||||||||||||||||||||||
Sbjct: 497 cgggtggaggtggaggacgacc 476
>gb|BQ789231.1|BQ789231 WHE4159_A11_A21ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4159_A11_A21, mRNA sequence
Length = 637
Score = 44.1 bits (22), Expect = 0.009
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggagg-tggaggacgacccagaaggagaagaacagcttgccgag 477
||||||||||| |||| || | ||||||| ||||||| |||||||| ||||| ||||
Sbjct: 518 cccttgaggaaggggtagaagatggaggatcacccagatcgagaagaagagctttccgaa 577
Query: 478 cagcgggccccagg 491
|||||||||||||
Sbjct: 578 gagcgggccccagg 591
>gb|BQ805050.1|BQ805050 WHE3562_C03_F06ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3562_C03_F06, mRNA sequence
Length = 623
Score = 42.1 bits (21), Expect = 0.037
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagctt 471
||||||||||| |||| ||| ||||||| ||||||| |||||||| |||||
Sbjct: 462 cccttgaggaaggggtagagatggaggatcacccagattgagaagaagagctt 410
>gb|CA644966.1|CA644966 wre1n.pk0085.f12 wre1n Triticum aestivum cDNA clone
wre1n.pk0085.f12 5' end, mRNA sequence
Length = 613
Score = 42.1 bits (21), Expect = 0.037
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 449 acccagaaggagaagaacagcttgccgagcagcgggcccca 489
|||||||||| |||||| ||||||| || |||||||||||
Sbjct: 398 acccagaaggcgaagaagagcttgcagaagagcgggcccca 358
>gb|CD925384.1|CD925384 G750.116O21F010709 G750 Triticum aestivum cDNA clone G750116O21,
mRNA sequence
Length = 606
Score = 42.1 bits (21), Expect = 0.037
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagctt 471
||||||||||| |||| ||| ||||||| ||||||| |||||||| |||||
Sbjct: 555 cccttgaggaaggggtagagatggaggatcacccagattgagaagaagagctt 503
>gb|CK197590.1|CK197590 FGAS006068 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 892
Score = 42.1 bits (21), Expect = 0.037
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 419 cccttgaggaacgggtggaggtggaggacgacccagaaggagaagaacagcttgccgagc 478
|||||||||||||||| || |||| | |||||||||| |||||| ||||| ||||
Sbjct: 571 cccttgaggaacgggtaaagatggacaatcacccagaaggcgaagaagagcttcccgaag 630
Query: 479 agcgggccc 487
|||||||||
Sbjct: 631 agcgggccc 639
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 117,738
Number of Sequences: 636343
Number of extensions: 117738
Number of successful extensions: 28257
Number of sequences better than 0.5: 47
Number of HSP's better than 0.5 without gapping: 46
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 28208
Number of HSP's gapped (non-prelim): 47
length of query: 520
length of database: 367,240,239
effective HSP length: 19
effective length of query: 501
effective length of database: 355,149,722
effective search space: 177930010722
effective search space used: 177930010722
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)