BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.068P22F020924.3.1
(714 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|X56782.1|TA1B38 T.aestivum 1b-c38 gene for HBP-1b (leuc... 371 e-101
gb|CA621899.1|CA621899 wl1n.pk0079.e2 wl1n Triticum aestivu... 143 2e-032
gb|CA744752.1|CA744752 wri1s.pk009.d23 wri1s Triticum aesti... 137 1e-030
gb|BQ579474.1|BQ579474 WHE2970_G12_N24ZS Wheat dormant embr... 121 7e-026
gb|CF134232.1|CF134232 WHE4369_E01_J01ZT Wheat meiotic flor... 115 4e-024
gb|BQ838179.1|BQ838179 WHE2907_D11_H21ZS Wheat aluminum-str... 109 3e-022
dbj|D30809.1|WHTHPB1B Wheat gene for transcription factor H... 96 4e-018
gb|BE493273.1|BE493273 WHE0569_G03_N05ZE Triticum monococcu... 94 2e-017
gb|CA620719.1|CA620719 wl1n.pk0067.g12 wl1n Triticum aestiv... 94 2e-017
gb|CA623596.1|CA623596 wl1n.pk0108.g3 wl1n Triticum aestivu... 94 2e-017
gb|CA622798.1|CA622798 wl1n.pk0099.c10 wl1n Triticum aestiv... 92 6e-017
gb|CA620230.1|CA620230 wl1n.pk0053.g8 wl1n Triticum aestivu... 84 2e-014
gb|CA610531.1|CA610531 wr1.pk0118.a8 wr1 Triticum aestivum ... 82 6e-014
gb|CA622081.1|CA622081 wl1n.pk0094.h11 wl1n Triticum aestiv... 82 6e-014
gb|CA705573.1|CA705573 wdk1c.pk020.g23 wdk1c Triticum aesti... 78 9e-013
gb|CK197256.1|CK197256 FGAS005727 Triticum aestivum FGAS: L... 78 9e-013
gb|CA618784.1|CA618784 wl1n.pk0044.c9 wl1n Triticum aestivu... 66 4e-009
gb|CA623049.1|CA623049 wl1n.pk0101.d3 wl1n Triticum aestivu... 66 4e-009
gb|CA649748.1|CA649748 wre1n.pk0146.g6 wre1n Triticum aesti... 66 4e-009
dbj|D12921.2|WHTHBP1BC1 Triticum aestivum mRNA for transcri... 66 4e-009
gb|CA698709.1|CA698709 wlk8.pk0008.h6 wlk8 Triticum aestivu... 58 9e-007
gb|CA705697.1|CA705697 wdk1c.pk021.b3 wdk1c Triticum aestiv... 50 2e-004
gb|DR739282.1|DR739282 FGAS084499 Triticum aestivum FGAS: L... 42 0.052
>emb|X56782.1|TA1B38 T.aestivum 1b-c38 gene for HBP-1b (leucine zipper type
transcription factor)
Length = 2204
Score = 371 bits (187), Expect = e-101
Identities = 373/435 (85%)
Strand = Plus / Plus
Query: 280 ttctgactccagtgacagatccaaagacaaacatggagatcaaaagacattgcgccgcct 339
||||||||| ||||||||||||| ||||||| | ||||||||||||||| |||| || ||
Sbjct: 238 ttctgactctagtgacagatccagagacaaaaacggagatcaaaagacaatgcgtcggct 297
Query: 340 tgctcaaaatcgtgaggctgcaaggaagagccgactaaggaagaaggcatatgttcaaca 399
|||||||||||| |||||||| ||||| || || | ||||| |||||||||||||||||
Sbjct: 298 tgctcaaaatcgcgaggctgctaggaaaagtcgtttgaggaaaaaggcatatgttcaaca 357
Query: 400 gttggagaatagcaggctaaaacttacccaactagagcaagagctgcaaagagctcgtca 459
|||||||| ||||||||||| |||||||| |||||||| ||| ||||| ||||||||||
Sbjct: 358 attggagaacagcaggctaaagcttacccagctagagcaggagttgcaacgagctcgtca 417
Query: 460 gcagggcatttttatatctagttcagttgatcagtcacactccatgagtggaaatggggc 519
|| |||||||||||||||||||||| || ||||| || ||||||||||||||||||||
Sbjct: 418 acaaggcatttttatatctagttcagcagaccagtcccattccatgagtggaaatggggc 477
Query: 520 atcggcctttgatatggagtatgcgaggtggttggaagagcacaatcggcaaattagtga 579
| ||| ||||| | |||||| || ||||||||||||| |||||||| ||| ||| |||
Sbjct: 478 gttggcttttgacacggagtacgcacggtggttggaagaacacaatcgacaagttaatga 537
Query: 580 actaagggctggtgtcagtgctcatgcaagtgatactgatcttcgaagtgttgttgataa 639
|| || |||| || | |||||||||| | |||||||| || || ||||||||||| ||
Sbjct: 538 gctgagagctgcagttaatgctcatgcaggcgatactgagctgcgtagtgttgttgagaa 597
Query: 640 gatcatgtcacactatgatgagatttttaggctcaaaggcaatgcagccaaggcagatgt 699
||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 598 gatcatgtcacactatgatgagatttttaagcaaaaaggaaatgcagccaaagcagatgt 657
Query: 700 ttttcacgtcttatc 714
||||| || |||||
Sbjct: 658 ctttcatgtgttatc 672
Score = 81.8 bits (41), Expect = 6e-014
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 189 caatggcagatgccagccctagaacagaaacatcaacagatgatactga 237
|||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 144 caatggcagaggccagccctagaacagaaacgtcaacagatgatactga 192
>gb|CA621899.1|CA621899 wl1n.pk0079.e2 wl1n Triticum aestivum cDNA clone wl1n.pk0079.e2 5'
end, mRNA sequence
Length = 649
Score = 143 bits (72), Expect = 2e-032
Identities = 119/135 (88%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 2 gcgctcggcacgcaggcgacggctgcggcgctcaggttggggttctcatcgacggcgtca 61
||||||||||||| ||| ||||| |||||||||||| | |||| |||||||||||
Sbjct: 22 gcgctcggcacgcgggcaacggcagcggcgctcaggct------ctcagcgacggcgtca 75
Query: 62 gcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctccgcac 121
|||||||||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||
Sbjct: 76 gcggcttcccctcccgactctcgccagtcgcctcgcgccctagcctccgatcctccgcac 135
Query: 122 actggccggtgaccc 136
|| ||||||||||||
Sbjct: 136 accggccggtgaccc 150
>gb|CA744752.1|CA744752 wri1s.pk009.d23 wri1s Triticum aestivum cDNA clone wri1s.pk009.d23
5' end, mRNA sequence
Length = 693
Score = 137 bits (69), Expect = 1e-030
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 546 ggtggttggaagagcacaatcggcaaattagtgaactaagggctggtgtcagtgctcatg 605
||||||||||||| |||||||| ||| ||| ||| || || |||| || | ||||||||
Sbjct: 29 ggtggttggaagaacacaatcgacaagttaatgagctgagagctgcagttaatgctcatg 88
Query: 606 caagtgatactgatcttcgaagtgttgttgataagatcatgtcacactatgatgagattt 665
|| | |||||||| || || ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 89 caggcgatactgagctgcgtagtgttgttgagaagatcatgtcacactatgatgagattt 148
Query: 666 ttaggctcaaaggcaatgcagccaaggcagatgtttttcacgtcttatc 714
||| || ||||| ||||||||||| |||||||| ||||| || |||||
Sbjct: 149 ttaagcaaaaaggaaatgcagccaaagcagatgtctttcatgtgttatc 197
>gb|BQ579474.1|BQ579474 WHE2970_G12_N24ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2970_G12_N24, mRNA sequence
Length = 672
Score = 121 bits (61), Expect = 7e-026
Identities = 103/117 (88%)
Strand = Plus / Plus
Query: 598 tgctcatgcaagtgatactgatcttcgaagtgttgttgataagatcatgtcacactatga 657
|||||||||| | |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 52 tgctcatgcaggcgatactgagctgcgtagtgttgttgagaagatcatgtcacactatga 111
Query: 658 tgagatttttaggctcaaaggcaatgcagccaaggcagatgtttttcacgtcttatc 714
||||||||||| || ||||| ||||||||||| |||||||| ||||| || |||||
Sbjct: 112 tgagatttttaagcaaaaaggaaatgcagccaaagcagatgtctttcatgtgttatc 168
>gb|CF134232.1|CF134232 WHE4369_E01_J01ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4369_E01_J01, mRNA sequence
Length = 758
Score = 115 bits (58), Expect = 4e-024
Identities = 124/146 (84%)
Strand = Plus / Plus
Query: 320 caaaagacattgcgccgccttgctcaaaatcgtgaggctgcaaggaagagccgactaagg 379
|||||||||||||| || ||||||||||||||||||||||||||||| || ||| | |||
Sbjct: 588 caaaagacattgcgtcgtcttgctcaaaatcgtgaggctgcaaggaaaagtcgattgagg 647
Query: 380 aagaaggcatatgttcaacagttggagaatagcaggctaaaacttacccaactagagcaa 439
|||||| ||||||| |||||| | || | |||| ||| || ||| | |||||||||||
Sbjct: 648 aagaagtcatatgtgcaacagctagaaagcagcaagctgaagcttgcacaactagagcag 707
Query: 440 gagctgcaaagagctcgtcagcaggg 465
||||| || | |||||||||||||||
Sbjct: 708 gagctccagaaagctcgtcagcaggg 733
>gb|BQ838179.1|BQ838179 WHE2907_D11_H21ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2907_D11_H21, mRNA
sequence
Length = 738
Score = 109 bits (55), Expect = 3e-022
Identities = 125/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 320 caaaagacattgcgccgccttgctcaaaatcgtgaggctgcaaggaagagccga-ctaag 378
||||||||||||||||| ||||||||||||||||||||||||||||| || ||| || ||
Sbjct: 557 caaaagacattgcgccgtcttgctcaaaatcgtgaggctgcaaggaaaagtcgagctgag 616
Query: 379 gaagaaggcatatgttcaacagttggagaatagcaggctaaaacttacccaactagagca 438
||||||| ||||||| |||||| | || | |||| ||| || ||| | |||||||||||
Sbjct: 617 gaagaagtcatatgtgcaacagctagaaagcagcaagctgaagcttgcacaactagagca 676
Query: 439 agagctgcaaagagctcgtcagcaggg 465
||||| || | |||||| ||||||||
Sbjct: 677 ggagctccagaaagctcgccagcaggg 703
>dbj|D30809.1|WHTHPB1B Wheat gene for transcription factor HBP-1b(c38), partial cds
Length = 6706
Score = 95.6 bits (48), Expect = 4e-018
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 384 aggcatatgttcaacagttggagaatagcaggctaaaacttacccaactagagcaagagc 443
|||||||||||||||| |||||||| ||||||||||| |||||||| |||||||| |||
Sbjct: 6215 aggcatatgttcaacaattggagaacagcaggctaaagcttacccagctagagcaggagt 6274
Query: 444 tgcaaagagctcgtca 459
||||| ||||||||||
Sbjct: 6275 tgcaacgagctcgtca 6290
Score = 81.8 bits (41), Expect = 6e-014
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 189 caatggcagatgccagccctagaacagaaacatcaacagatgatactga 237
|||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 3995 caatggcagaggccagccctagaacagaaacgtcaacagatgatactga 4043
Score = 71.9 bits (36), Expect = 6e-011
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 461 cagggcatttttatatctagttcagttgatcagtcacactccatgagtggaaatgg 516
||||||||||||||||||||||||| || ||||| || |||||||||||||||||
Sbjct: 6375 cagggcatttttatatctagttcagcagaccagtcccattccatgagtggaaatgg 6430
Score = 63.9 bits (32), Expect = 1e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 546 ggtggttggaagagcacaatcggcaaattagtgaactaagggctggtgtcagtgctcatg 605
||||||||||||| |||||||| ||| ||| ||| || || |||| || | ||||||||
Sbjct: 6607 ggtggttggaagaacacaatcgacaagttaatgagctgagagctgcagttaatgctcatg 6666
Query: 606 caagtgatactgatcttcgaagtgttgttgataagatcat 645
|| | |||||||| || || ||||||||||| ||||||||
Sbjct: 6667 caggcgatactgagctgcgtagtgttgttgagaagatcat 6706
Score = 60.0 bits (30), Expect = 2e-007
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 280 ttctgactccagtgacagatccaaagacaaacatggagatcaaaag 325
||||||||| ||||||||||||| ||||||| | ||||||||||||
Sbjct: 5472 ttctgactctagtgacagatccagagacaaaaacggagatcaaaag 5517
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 324 agacattgcgccgccttgctcaaaatcgtgaggctgcaaggaa 366
||||| |||| || |||||||||||||| |||||||| |||||
Sbjct: 5607 agacaatgcgtcggcttgctcaaaatcgcgaggctgctaggaa 5649
>gb|BE493273.1|BE493273 WHE0569_G03_N05ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0569_G03_N05, mRNA
sequence
Length = 574
Score = 93.7 bits (47), Expect = 2e-017
Identities = 119/143 (83%)
Strand = Plus / Plus
Query: 332 cgccgccttgctcaaaatcgtgaggctgcaaggaagagccgactaaggaagaaggcatat 391
||||| ||||| ||||| ||||| ||||| ||||| ||||| |||| ||||||||||||
Sbjct: 38 cgccgtcttgcccaaaaccgtgaagctgctaggaaaagccgtttaagaaagaaggcatat 97
Query: 392 gttcaacagttggagaatagcaggctaaaacttacccaactagagcaagagctgcaaaga 451
| ||| | |||||| ||| || |||||||||| ||||||||||||||||| || |
Sbjct: 98 atccaaaacctggagagtagtagattaaaacttactcaactagagcaagagcttcagcgt 157
Query: 452 gctcgtcagcagggcatttttat 474
|||||||| ||||||||||||||
Sbjct: 158 gctcgtcaacagggcatttttat 180
>gb|CA620719.1|CA620719 wl1n.pk0067.g12 wl1n Triticum aestivum cDNA clone wl1n.pk0067.g12
5' end, mRNA sequence
Length = 503
Score = 93.7 bits (47), Expect = 2e-017
Identities = 101/119 (84%)
Strand = Plus / Plus
Query: 3 cgctcggcacgcaggcgacggctgcggcgctcaggttggggttctcatcgacggcgtcag 62
|||| ||||||||||||||||| ||||||||||| | | | ||||| ||||||||||
Sbjct: 25 cgctgggcacgcaggcgacggcgacggcgctcaggctcgtgctctcaggaacggcgtcag 84
Query: 63 cggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctccgcac 121
| |||||| || ||||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 85 ctgcttcctttctcgcctcttgccagtcgcctcgcgccctcgcctttggtcctccgcac 143
>gb|CA623596.1|CA623596 wl1n.pk0108.g3 wl1n Triticum aestivum cDNA clone wl1n.pk0108.g3 5'
end, mRNA sequence
Length = 613
Score = 93.7 bits (47), Expect = 2e-017
Identities = 101/119 (84%)
Strand = Plus / Plus
Query: 3 cgctcggcacgcaggcgacggctgcggcgctcaggttggggttctcatcgacggcgtcag 62
|||| ||||||||||||||||| ||||||||||| | | | ||||| ||||||||||
Sbjct: 13 cgctgggcacgcaggcgacggcgacggcgctcaggctcgtgctctcaggaacggcgtcag 72
Query: 63 cggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctccgcac 121
| |||||| || ||||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 73 ctgcttcctttctcgcctcttgccagtcgcctcgcgccctcgcctttggtcctccgcac 131
>gb|CA622798.1|CA622798 wl1n.pk0099.c10 wl1n Triticum aestivum cDNA clone wl1n.pk0099.c10
5' end, mRNA sequence
Length = 529
Score = 91.7 bits (46), Expect = 6e-017
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||||||| ||||||||| |||||||| |||| | ||||||||||||||||||
Sbjct: 182 cggcgtcagcggctccccctcccgaatctcgccaatcgccttgcgccctcgcctccggtc 241
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| || |||||| ||||||||
Sbjct: 242 ctccgcccaacggccggcgaccctgc 267
Score = 61.9 bits (31), Expect = 6e-008
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 2 gcgctcggcacgcaggcgacggctgcggcgctcaggttggggttctcatcgacgg 56
||||||||||||||||||||||| || ||||||||| | ||| ||||| ||||||
Sbjct: 104 gcgctcggcacgcaggcgacggcggcagcgctcaggctcgggctctcagcgacgg 158
>gb|CA620230.1|CA620230 wl1n.pk0053.g8 wl1n Triticum aestivum cDNA clone wl1n.pk0053.g8 5'
end, mRNA sequence
Length = 627
Score = 83.8 bits (42), Expect = 2e-014
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||||||| ||||||||| |||||||| |||| | ||||||||||||||||||
Sbjct: 182 cggcgtcagcggctccccctcccgaatctcgccaatcgccttgcgccctcgcctccggtc 241
Query: 114 ctccgc 119
||||||
Sbjct: 242 ctccgc 247
Score = 61.9 bits (31), Expect = 6e-008
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 2 gcgctcggcacgcaggcgacggctgcggcgctcaggttggggttctcatcgacgg 56
||||||||||||||||||||||| || ||||||||| | ||| ||||| ||||||
Sbjct: 104 gcgctcggcacgcaggcgacggcggcagcgctcaggctcgggctctcagcgacgg 158
>gb|CA610531.1|CA610531 wr1.pk0118.a8 wr1 Triticum aestivum cDNA clone wr1.pk0118.a8 5'
end, mRNA sequence
Length = 599
Score = 81.8 bits (41), Expect = 6e-014
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 280 ttctgactccagtgacagatccaaagacaaacatggagatcaaaagacattgcgccgcct 339
||||||||| ||||||||||||| ||||||| | ||||||||||||||| |||| || ||
Sbjct: 235 ttctgactctagtgacagatccagagacaaaaacggagatcaaaagacaatgcgtcggct 294
Query: 340 tgctcaaaa 348
|||||||||
Sbjct: 295 tgctcaaaa 303
Score = 81.8 bits (41), Expect = 6e-014
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 189 caatggcagatgccagccctagaacagaaacatcaacagatgatactga 237
|||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 141 caatggcagaggccagccctagaacagaaacgtcaacagatgatactga 189
>gb|CA622081.1|CA622081 wl1n.pk0094.h11 wl1n Triticum aestivum cDNA clone wl1n.pk0094.h11
5' end, mRNA sequence
Length = 575
Score = 81.8 bits (41), Expect = 6e-014
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 3 cgctcggcacgcaggcgacggctgcggcgctcaggttggggttctcatcgacggcgtcag 62
|||| ||||||||||||||||| ||||||||||| | | | ||||| ||||||||||
Sbjct: 31 cgctgggcacgcaggcgacggcgacggcgctcaggctcgtgctctcaggaacggcgtcag 90
Query: 63 cggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcct 107
| |||||| || ||||||| ||||||||| ||||||||||||||
Sbjct: 91 ctgcttcctttctcgcctcttgccagtcgcctcgcgccctcgcct 135
>gb|CA705573.1|CA705573 wdk1c.pk020.g23 wdk1c Triticum aestivum cDNA clone wdk1c.pk020.g23
5' end, mRNA sequence
Length = 420
Score = 77.8 bits (39), Expect = 9e-013
Identities = 117/143 (81%)
Strand = Plus / Plus
Query: 332 cgccgccttgctcaaaatcgtgaggctgcaaggaagagccgactaaggaagaaggcatat 391
||||| ||||| ||||| ||||| ||||| ||||| ||||| |||| ||||||||||||
Sbjct: 83 cgccgtcttgcccaaaaccgtgaagctgctaggaaaagccgtttaagaaagaaggcatat 142
Query: 392 gttcaacagttggagaatagcaggctaaaacttacccaactagagcaagagctgcaaaga 451
| ||| | |||||| ||| || | |||||||| ||||||||||||||||| || |
Sbjct: 143 atccaaaacctggagagtagtagattgaaacttactcaactagagcaagagcttcagcgt 202
Query: 452 gctcgtcagcagggcatttttat 474
|||||||| |||||||| |||||
Sbjct: 203 gctcgtcaacagggcatatttat 225
>gb|CK197256.1|CK197256 FGAS005727 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 77.8 bits (39), Expect = 9e-013
Identities = 117/143 (81%)
Strand = Plus / Plus
Query: 332 cgccgccttgctcaaaatcgtgaggctgcaaggaagagccgactaaggaagaaggcatat 391
||||| ||||| ||||| ||||| ||||| ||||| ||||| |||| ||||||||||||
Sbjct: 165 cgccgtcttgcccaaaaccgtgaagctgctaggaaaagccgtttaagaaagaaggcatat 224
Query: 392 gttcaacagttggagaatagcaggctaaaacttacccaactagagcaagagctgcaaaga 451
| ||| | |||||| ||| || | |||||||| ||||||||||||||||| || |
Sbjct: 225 atccaaaacctggagagtagtagattgaaacttactcaactagagcaagagcttcagcgt 284
Query: 452 gctcgtcagcagggcatttttat 474
|||||||| |||||||| |||||
Sbjct: 285 gctcgtcaacagggcatatttat 307
Score = 42.1 bits (21), Expect = 0.052
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 630 ttgttgataagatcatgtcacactatgatgagatttttaggctcaaaggcaatgcagcca 689
||||||||| |||||| |||| |||||||| |||| |||||||| || |||||||
Sbjct: 463 ttgttgatagcatcatggcacagtatgatgaatttttcaggctcaagggtgtagcagcca 522
Query: 690 aggcagatgtttt 702
| |||||||||||
Sbjct: 523 aagcagatgtttt 535
>gb|CA618784.1|CA618784 wl1n.pk0044.c9 wl1n Triticum aestivum cDNA clone wl1n.pk0044.c9 5'
end, mRNA sequence
Length = 680
Score = 65.9 bits (33), Expect = 4e-009
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 103 cgcctccggtcctccgcacactggccggtgaccctgc 139
||||||||||||||||||||| |||||||||||||||
Sbjct: 113 cgcctccggtcctccgcacaccggccggtgaccctgc 149
Score = 58.0 bits (29), Expect = 9e-007
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 26 gcggcgctcaggttggggttctcat-cgacggcgtcagcggcttcccctcccgcctc 81
|||||||||||| | ||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 62 gcggcgctcaggctcgggctctcaagcgacggcgtcaacggcttcccctcccgcctc 118
>gb|CA623049.1|CA623049 wl1n.pk0101.d3 wl1n Triticum aestivum cDNA clone wl1n.pk0101.d3 5'
end, mRNA sequence
Length = 623
Score = 65.9 bits (33), Expect = 4e-009
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 103 cgcctccggtcctccgcacactggccggtgaccctgc 139
||||||||||||||||||||| |||||||||||||||
Sbjct: 113 cgcctccggtcctccgcacaccggccggtgaccctgc 149
Score = 58.0 bits (29), Expect = 9e-007
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 26 gcggcgctcaggttggggttctcat-cgacggcgtcagcggcttcccctcccgcctc 81
|||||||||||| | ||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 62 gcggcgctcaggctcgggctctcaagcgacggcgtcaacggcttcccctcccgcctc 118
>gb|CA649748.1|CA649748 wre1n.pk0146.g6 wre1n Triticum aestivum cDNA clone wre1n.pk0146.g6
5' end, mRNA sequence
Length = 484
Score = 65.9 bits (33), Expect = 4e-009
Identities = 46/49 (93%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 189 caatggcagatgccagcccta-gaacagaaacatcaacagatgatactg 236
|||||||||| |||||||||| |||||||||| ||||||||||||||||
Sbjct: 141 caatggcagaggccagccctaagaacagaaacgtcaacagatgatactg 189
>dbj|D12921.2|WHTHBP1BC1 Triticum aestivum mRNA for transcription factor HBP-1b(c1), partial
cds
Length = 1505
Score = 65.9 bits (33), Expect = 4e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 332 cgccgccttgctcaaaatcgtgaggctgcaaggaagagccgactaaggaagaaggcatat 391
||||| ||||| ||||| ||||| ||||| ||||| ||||| | || ||||||||||||
Sbjct: 582 cgccgtcttgcccaaaaccgtgaagctgctaggaaaagccgtttgagaaagaaggcatat 641
Query: 392 gttcaacagttggagaatagcaggctaaaacttacccaactagagcaagagctgcaaaga 451
| ||| | |||||| ||| || | |||||||| ||||||||||||||||| || |
Sbjct: 642 atccaaaacctggagagtagtagattgaaacttactcaactagagcaagagcttcagcgt 701
Query: 452 gctcgtcagcagggcat 468
|||||||| ||||||||
Sbjct: 702 gctcgtcaacagggcat 718
Score = 42.1 bits (21), Expect = 0.052
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 630 ttgttgataagatcatgtcacactatgatgagatttttaggctcaaaggcaatgcagcca 689
||||||||| |||||||| || |||||||| |||| |||||||| || |||||||
Sbjct: 880 ttgttgatagcatcatgtcgcagtatgatgaatttttcaggctcaagggtgtagcagcca 939
Query: 690 aggcagatgtttt 702
| |||||||||||
Sbjct: 940 aagcagatgtttt 952
>gb|CA698709.1|CA698709 wlk8.pk0008.h6 wlk8 Triticum aestivum cDNA clone wlk8.pk0008.h6 5'
end, mRNA sequence
Length = 549
Score = 58.0 bits (29), Expect = 9e-007
Identities = 115/144 (79%)
Strand = Plus / Plus
Query: 377 aggaagaaggcatatgttcaacagttggagaatagcaggctaaaacttacccaactagag 436
||||||||| ||||||| |||||| | || | |||| ||| || ||| | |||||||||
Sbjct: 21 aggaagaagtcatatgtgcaacagntagaaagcagcaagctgaagcttgcacaactagag 80
Query: 437 caagagctgcaaagagctcgtcagcagggcatttttatatctagttcagttgatcagtca 496
|| ||||| || | ||||||||||||||| || || || ||||| || | || ||| |
Sbjct: 81 caggagctccagaaagctcgtcagcagggaatcttcatttctagctccggagaccagacc 140
Query: 497 cactccatgagtggaaatggggca 520
|| ||||||||||||||||||||
Sbjct: 141 catgccatgagtggaaatggggca 164
>gb|CA705697.1|CA705697 wdk1c.pk021.b3 wdk1c Triticum aestivum cDNA clone wdk1c.pk021.b3 5'
end, mRNA sequence
Length = 430
Score = 50.1 bits (25), Expect = 2e-004
Identities = 76/93 (81%)
Strand = Plus / Plus
Query: 428 caactagagcaagagctgcaaagagctcgtcagcagggcatttttatatctagttcagtt 487
||||||||||| ||||| || | ||||||||||||||| || || || ||||| || |
Sbjct: 14 caactagagcaggagctccagaaagctcgtcagcagggaatcttcatttctagctccgga 73
Query: 488 gatcagtcacactccatgagtggaaatggggca 520
|| ||| | || ||||||||||||||||||||
Sbjct: 74 gaccagacccatgccatgagtggaaatggggca 106
>gb|DR739282.1|DR739282 FGAS084499 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1136
Score = 42.1 bits (21), Expect = 0.052
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 527 tttgatatggagtatgcgaggtggttggaagagcaca 563
||||| |||||||||| ||| ||| ||||||||||||
Sbjct: 335 tttgacatggagtatgggagatgggtggaagagcaca 371
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 140,604
Number of Sequences: 636343
Number of extensions: 140604
Number of successful extensions: 41605
Number of sequences better than 0.5: 23
Number of HSP's better than 0.5 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41547
Number of HSP's gapped (non-prelim): 48
length of query: 714
length of database: 367,240,239
effective HSP length: 19
effective length of query: 695
effective length of database: 355,149,722
effective search space: 246829056790
effective search space used: 246829056790
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)