BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL16c05.xg.2.1
(687 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV761568.1|CV761568 FGAS055956 Triticum aestivum FGAS: L... 357 6e-097
gb|DR741381.1|DR741381 FGAS030437 Triticum aestivum FGAS: L... 357 6e-097
gb|CK206107.1|CK206107 FGAS017684 Triticum aestivum FGAS: L... 349 2e-094
gb|BJ210154.1|BJ210154 BJ210154 Y. Ogihara unpublished cDNA... 347 6e-094
gb|BF484646.1|BF484646 WHE2318_A05_A10ZS Wheat pre-anthesis... 333 9e-090
gb|BJ213319.1|BJ213319 BJ213319 Y. Ogihara unpublished cDNA... 333 9e-090
gb|BJ258203.1|BJ258203 BJ258203 Y. Ogihara unpublished cDNA... 317 6e-085
gb|CA631868.1|CA631868 wle1n.pk0052.g12 wle1n Triticum aest... 174 5e-042
gb|BQ802392.1|BQ802392 WHE2825_D09_G17ZS Triticum monococcu... 119 3e-025
gb|CA730325.1|CA730325 wip1c.pk003.l14 wip1c Triticum aesti... 98 1e-018
gb|BF201238.1|BF201238 WHE1769_G11_N21ZS Wheat pre-anthesis... 96 4e-018
gb|BQ789363.1|BQ789363 WHE4160_E08_I16ZS Wheat CS whole pla... 96 4e-018
gb|CA706736.1|CA706736 wdk1c.pk024.g7 wdk1c Triticum aestiv... 82 6e-014
gb|BI751774.1|BI751774 Ta01_12a10_R Ta01_AAFC_ECORC_Fusariu... 80 2e-013
gb|BE490486.1|BE490486 WHE0360_A09_A18ZS Wheat cold-stresse... 78 9e-013
gb|CD877202.1|CD877202 AZO4.002G05F010503 AZO4 Triticum aes... 76 4e-012
gb|CV776467.1|CV776467 FGAS070871 Triticum aestivum FGAS: L... 74 1e-011
gb|BQ245626.1|BQ245626 TaE15022B12R TaE15 Triticum aestivum... 60 2e-007
gb|CA718492.1|CA718492 wdk5c.pk006.o19 wdk5c Triticum aesti... 60 2e-007
gb|BT008981.2| Triticum aestivum clone wdk2c.pk006.d4:fis, ... 60 2e-007
gb|CK208426.1|CK208426 FGAS020139 Triticum aestivum FGAS: L... 58 8e-007
gb|AL827602.1|AL827602 AL827602 p:638 Triticum aestivum cDN... 52 5e-005
gb|CA707730.1|CA707730 wdk2c.pk006.d4 wdk2c Triticum aestiv... 52 5e-005
gb|BF484480.1|BF484480 WHE2324_A08_B16ZS Wheat pre-anthesis... 46 0.003
gb|CA625907.1|CA625907 wl1n.pk0142.g4 wl1n Triticum aestivu... 46 0.003
gb|CK210437.1|CK210437 FGAS022248 Triticum aestivum FGAS: L... 44 0.013
gb|CV763246.1|CV763246 FGAS057635 Triticum aestivum FGAS: L... 44 0.013
gb|CV764529.1|CV764529 FGAS058914 Triticum aestivum FGAS: L... 44 0.013
gb|DR736371.1|DR736371 FGAS081741 Triticum aestivum FGAS: L... 44 0.013
gb|DR741440.1|DR741440 FGAS030495 Triticum aestivum FGAS: L... 44 0.013
gb|DR741480.1|DR741480 FGAS030535 Triticum aestivum FGAS: L... 44 0.013
gb|BQ483726.1|BQ483726 WHE3511_H07_P13ZS Wheat unstressed r... 42 0.050
gb|CA728684.1|CA728684 wdi1c.pk004.b4 wdi1c Triticum aestiv... 42 0.050
gb|CD936130.1|CD936130 OV.103L22F010205 OV Triticum aestivu... 42 0.050
gb|BE489625.1|BE489625 WHE1071-1074_O10_O10ZS Wheat unstres... 40 0.20
gb|BJ255988.1|BJ255988 BJ255988 Y. Ogihara unpublished cDNA... 40 0.20
gb|CD895005.1|CD895005 G118.127L17F010824 G118 Triticum aes... 40 0.20
gb|CK162489.1|CK162489 FGAS015084 Triticum aestivum FGAS: L... 40 0.20
>gb|CV761568.1|CV761568 FGAS055956 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 824
Score = 357 bits (180), Expect = 6e-097
Identities = 348/407 (85%), Gaps = 3/407 (0%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||
Sbjct: 366 agctcgcaggctctgcattgcactgaaatggggaggcattcgtgctgctacaagcagaag 425
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcacataacaaag 376
||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 426 ctgaggaaggggctctggtcccctgaggaggatgagaagctcatgaaccacataaccaag 485
Query: 377 catggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaag 436
|||||||||||||||||||||||||| || ||||| || ||||| |||||||| || |||
Sbjct: 486 catggccatggctgctggagctctgtccctaaacttgcagggctccaaaggtgtggcaag 545
Query: 437 agttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcc 496
|| || |||||||||||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 546 agctgcaggctgaggtggataaactacctgaggccagaccttaagagaggtgccttcgct 605
Query: 497 caagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacagangnnnntct 556
|| ||||| |||||||||||| | || || || ||||| || |||||||| | |||
Sbjct: 606 caggacgaggaagacctcatcgttgaactccatgctgtgcttgggaacaggtg---gtct 662
Query: 557 caaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatggaactcn 616
||||||||||| ||| |||| ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 663 caaattgcagcacagatgcctgggaggactgacaatgagattaagaacctctggaactcg 722
Query: 617 nncatcaagnnnnnnctgaggcagaaaggcattgatcccaacaccca 663
| ||||| ||| ||||||| |||||||| |||||||||||
Sbjct: 723 tccctcaagaagaagctgcggcagaagggcattgaccccaacaccca 769
Score = 79.8 bits (40), Expect = 2e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 13 ggagaggagtgcccc-tagcctttccttgctttccactgaaatctcctatctgcagccat 71
||||||||||||||| || ||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 108 ggagaggagtgccccctaacctttccctgctttccactgaaatctcctatctgcaaccat 167
>gb|DR741381.1|DR741381 FGAS030437 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1104
Score = 357 bits (180), Expect = 6e-097
Identities = 348/407 (85%), Gaps = 3/407 (0%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||
Sbjct: 276 agctcgcaggctctgcattgcactgaaatggggaggcattcgtgctgctacaagcagaag 335
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcacataacaaag 376
||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 336 ctgaggaaggggctctggtcccctgaggaggatgagaagctcatgaaccacataaccaag 395
Query: 377 catggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaag 436
|||||||||||||||||||||||||| || ||||| || ||||| |||||||| || |||
Sbjct: 396 catggccatggctgctggagctctgtccctaaacttgcagggctccaaaggtgtggcaag 455
Query: 437 agttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcc 496
|| || |||||||||||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 456 agctgcaggctgaggtggataaactacctgaggccagaccttaagagaggtgccttcgct 515
Query: 497 caagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacagangnnnntct 556
|| ||||| |||||||||||| | || || || ||||| || |||||||| | |||
Sbjct: 516 caggacgaggaagacctcatcgttgaactccatgctgtgcttgggaacaggtg---gtct 572
Query: 557 caaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatggaactcn 616
||||||||||| ||| |||| ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 573 caaattgcagcacagatgcctgggaggactgacaatgagattaagaacctctggaactcg 632
Query: 617 nncatcaagnnnnnnctgaggcagaaaggcattgatcccaacaccca 663
| ||||| ||| ||||||| |||||||| |||||||||||
Sbjct: 633 tccctcaagaagaagctgcggcagaagggcattgaccccaacaccca 679
Score = 65.9 bits (33), Expect = 3e-009
Identities = 56/61 (91%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 13 ggagaggagtgcccct-agcctttccttgctttccactgaaatctc-ctatctgcagcca 70
|||||||||||||||| | ||||||| ||||||||||||||||||| ||||||||| |||
Sbjct: 17 ggagaggagtgcccctnaacctttccctgctttccactgaaatctctctatctgcaacca 76
Query: 71 t 71
|
Sbjct: 77 t 77
>gb|CK206107.1|CK206107 FGAS017684 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1076
Score = 349 bits (176), Expect = 2e-094
Identities = 347/407 (85%), Gaps = 3/407 (0%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||
Sbjct: 273 agctcgcaggctctgcattgcactgaaatggggaggcattcgtgctgctacaagcagaag 332
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcacataacaaag 376
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||
Sbjct: 333 ctgaggaaggggctctggtcccctgaggaggatgagaagctcatgaaccacatcaccaag 392
Query: 377 catggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaag 436
|||||||||||||||||||||||||| || ||||| || ||||| ||||||||| | |||
Sbjct: 393 catggccatggctgctggagctctgtccctaaacttgcagggctccaaaggtgcagcaag 452
Query: 437 agttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcc 496
|| || |||||||||||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 453 agctgcaggctgaggtggataaactacctaaggccagaccttaagagaggtgccttcgct 512
Query: 497 caagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacagangnnnntct 556
|| ||||| |||||||||||| | || || || ||||| ||||||||||| | |||
Sbjct: 513 caggacgaggaagacctcatcgttgaactccatgctgtgctcgggaacaggtg---gtct 569
Query: 557 caaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatggaactcn 616
||||||||||| ||| |||| ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 570 caaattgcagcacagatgcctgggaggactgacaatgagattaagaacctctggaactcg 629
Query: 617 nncatcaagnnnnnnctgaggcagaaaggcattgatcccaacaccca 663
| ||||| ||| ||||||| |||||||| |||||||||||
Sbjct: 630 tccctcaagaagaagctgcggcagaagggcattgaccccaacaccca 676
Score = 67.9 bits (34), Expect = 9e-010
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 16 gaggagtgcccc-tagcctttccttgctttccactgaaatctcctatctg 64
|||||||||||| || ||||||| ||||||||||||||||||||||||||
Sbjct: 22 gaggagtgccccctaacctttccctgctttccactgaaatctcctatctg 71
>gb|BJ210154.1|BJ210154 BJ210154 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh9i04 5', mRNA sequence
Length = 429
Score = 347 bits (175), Expect = 6e-094
Identities = 313/359 (87%), Gaps = 3/359 (0%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||
Sbjct: 65 agctcgcaggctctgcattgcactgaaatggggaggcattcgtgctgctacaagcagaag 124
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcacataacaaag 376
||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 125 ctgaggaaggggctctggtcccctgaggaggatgagaagctcatgaaccacataaccaag 184
Query: 377 catggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaag 436
|||||||||||||||||||||||||| || ||||| || ||||| |||||||| || |||
Sbjct: 185 catggccatggctgctggagctctgtccctaaacttgcagggctccaaaggtgtggcaag 244
Query: 437 agttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcc 496
|| || |||||||||||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 245 agctgcaggctgaggtggataaactacctgaggccagaccttaagagaggtgccttcgct 304
Query: 497 caagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacagangnnnntct 556
|| ||||| |||||||||||| | || || || ||||| || |||||||| | |||
Sbjct: 305 caggacgaggaagacctcatcgttgaactccatgctgtgcttgggaacaggtg---gtct 361
Query: 557 caaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatggaactc 615
||||||||||| ||| |||| ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 362 caaattgcagcacagatgcctgggaggactgacaatgagattaagaacctctggaactc 420
>gb|BF484646.1|BF484646 WHE2318_A05_A10ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2318_A05_A10, mRNA sequence
Length = 555
Score = 333 bits (168), Expect = 9e-090
Identities = 297/340 (87%), Gaps = 3/340 (0%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||
Sbjct: 219 agctcgcaggctctgcattgcactgaaatggggaggcattcgtgctgctacaagcagaag 278
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcacataacaaag 376
||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 279 ctgaggaaggggctctggtcccctgaggaggatgagaagctcatgaaccacataaccaag 338
Query: 377 catggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaag 436
|||||||||||||||||||||||||| || ||||| || ||||| |||||||| || |||
Sbjct: 339 catggccatggctgctggagctctgtccctaaacttgcagggctccaaaggtgtggcaag 398
Query: 437 agttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcc 496
|| || |||||||||||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 399 agctgcaggctgaggtggataaactacctgaggccagaccttaagagaggtgccttcgct 458
Query: 497 caagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacagangnnnntct 556
|| ||||| |||||||||||| | || || || ||||| || |||||||| | |||
Sbjct: 459 caggacgaggaagacctcatcgttgaactccatgctgtgcttgggaacaggtg---gtct 515
Query: 557 caaattgcagcgcagctgccagggaggactgataatgaga 596
||||||||||| ||| |||| ||||||||||| |||||||
Sbjct: 516 caaattgcagcacagatgcctgggaggactgacaatgaga 555
>gb|BJ213319.1|BJ213319 BJ213319 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh21n20 5', mRNA sequence
Length = 585
Score = 333 bits (168), Expect = 9e-090
Identities = 345/407 (84%), Gaps = 3/407 (0%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
||||| |||| |||||||||| ||| |||||||||||||| || |||||||||||||||
Sbjct: 84 agctcgcaggctctgcattgcactgaaatggggaggcattcgtgttgctacaagcagaag 143
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcacataacaaag 376
||||| || ||||||||||||||||||||||||||||| |||||||| ||||| || |||
Sbjct: 144 ctgaggaaagggctctggtcccctgaggaggatgagaagctcatgaaccacatcaccaag 203
Query: 377 catggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaag 436
|||||||||||||||||||||||||| || ||||| || || || ||||||||||| |||
Sbjct: 204 catggccatggctgctggagctctgtccctaaacttgcaggactccaaaggtgcggcaag 263
Query: 437 agttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcc 496
|| || |||||||||||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 264 agctgcaggctgaggtggataaactacctgaggccagaccttaagagaggtgccttcgct 323
Query: 497 caagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacagangnnnntct 556
|| ||||| |||||||||||| | || || || ||||| ||||||||||| | |||
Sbjct: 324 caggacgaggaagacctcatcgttgaactccatgctgtgctcgggaacaggtg---gtct 380
Query: 557 caaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatggaactcn 616
||||||||||| ||| |||| ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 381 caaattgcagcacagatgcctgggaggactgacaatgagattaagaacctctggaactcg 440
Query: 617 nncatcaagnnnnnnctgaggcagaaaggcattgatcccaacaccca 663
| ||||| ||| ||||||| |||||||| ||||| |||||
Sbjct: 441 tccctcaagaagaagctgcggcagaagggcattgaccccaataccca 487
>gb|BJ258203.1|BJ258203 BJ258203 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6f19 5', mRNA sequence
Length = 574
Score = 317 bits (160), Expect = 6e-085
Identities = 286/328 (87%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||
Sbjct: 250 agctcgcaggctctgcattgcactgaaatggggaggcattcgtgctgctacaagcagaag 309
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcacataacaaag 376
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||
Sbjct: 310 ctgaggaaggggctctggtcccctgaggaggatgagaagctcatgaaccacatcaccaag 369
Query: 377 catggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaag 436
|||||||||||||||||||||||||| || ||||| || ||||| ||||||||||| |||
Sbjct: 370 catggccatggctgctggagctctgtccctaaacttgcagggctccaaaggtgcggcaag 429
Query: 437 agttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcc 496
|| || |||||||||||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 430 agctgcaggctgaggtggataaactacctaaggccagaccttaagagaggtgccttcgct 489
Query: 497 caagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacagangnnnntct 556
|| ||||| |||||||||||| | || || || ||||| ||||||||||| | |||
Sbjct: 490 caggacgaggaagacctcatcgttgaactccatgctgtgctcgggaacaggtg---gtct 546
Query: 557 caaattgcagcgcagctgccagggagga 584
||||||||||| ||| |||| |||||||
Sbjct: 547 caaattgcagcacagatgcctgggagga 574
Score = 58.0 bits (29), Expect = 8e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 39 tgctttccactgaaatctcctatctgcagccat 71
|||||||||||||||||||||||||||| ||||
Sbjct: 23 tgctttccactgaaatctcctatctgcaaccat 55
>gb|CA631868.1|CA631868 wle1n.pk0052.g12 wle1n Triticum aestivum cDNA clone
wle1n.pk0052.g12 5' end, mRNA sequence
Length = 570
Score = 174 bits (88), Expect = 5e-042
Identities = 134/147 (91%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
||||| |||| |||||||||| ||| |||||||||||||| |||||||||||||| |||
Sbjct: 236 agctcgcaggctctgcattgcactgaaatggggaggcattcgtgctgctacaagcanaag 295
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcacataacaaag 376
||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 296 ctgaggaaggggctctggtcccctgaggaggatgagaagctcatgaaccacataaccaag 355
Query: 377 catggccatggctgct-ggagctctgt 402
||||| |||||||||| ||||||||||
Sbjct: 356 catgg-catggctgctgggagctctgt 381
Score = 58.0 bits (29), Expect = 8e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 39 tgctttccactgaaatctcctatctgcagccat 71
|||||||||||||||||||||||||||| ||||
Sbjct: 5 tgctttccactgaaatctcctatctgcaaccat 37
Score = 42.1 bits (21), Expect = 0.050
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 449 aggtggataaactatctgaggccagacct 477
|||||||||||||| ||||||||| ||||
Sbjct: 434 aggtggataaactacctgaggccaaacct 462
>gb|BQ802392.1|BQ802392 WHE2825_D09_G17ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2825_D09_G17, mRNA
sequence
Length = 702
Score = 119 bits (60), Expect = 3e-025
Identities = 159/192 (82%)
Strand = Plus / Plus
Query: 329 ctctggtcccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggc 388
|||||||| || |||||||| ||||| |||||||| ||||| | ||| | ||| | |||
Sbjct: 80 ctctggtcgccggaggaggacgagaagctcatgaaccacattgccaagtacggcaacggc 139
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| || ||||| |||| || ||| | |||||||| ||||| || ||||||
Sbjct: 140 tgctggagctccgtccccaagatcgcaggccttgagaggtgcgggaagagctgcaggctg 199
Query: 449 aggtggataaactatctgaggccagacctcaagagaggggcattcgcccaagacgaagaa 508
|||||||||||||| |||||||| ||||||||||| || || ||| | || || || |||
Sbjct: 200 aggtggataaactacctgaggccggacctcaagaggggcgccttctcgcaggaggaggaa 259
Query: 509 gacctcatcatc 520
||||||||||||
Sbjct: 260 gacctcatcatc 271
>gb|CA730325.1|CA730325 wip1c.pk003.l14 wip1c Triticum aestivum cDNA clone wip1c.pk003.l14
5' end, mRNA sequence
Length = 629
Score = 97.6 bits (49), Expect = 1e-018
Identities = 151/185 (81%)
Strand = Plus / Plus
Query: 299 tgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactc 358
|||||| ||||||||||| |||| | ||| || ||||| || ||||| || ||||| |||
Sbjct: 91 tgctgcaacaagcagaaggtgaggaggggcctgtggtcgccggaggaagacgagaagctc 150
Query: 359 atgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactcgctggg 418
| || |||| || |||||||||||||||||||||||| || || | || ||||||
Sbjct: 151 gtcaagtacatcaccgcgcatggccatggctgctggagctcagtcccaagacaagctggg 210
Query: 419 cttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctc 478
|| || ||||| || ||||| || |||||||||||||| ||||| |||||||| ||||||
Sbjct: 211 ctgcagaggtgtggcaagagctgcaggctgaggtggatcaactacctgaggccggacctc 270
Query: 479 aagag 483
|||||
Sbjct: 271 aagag 275
>gb|BF201238.1|BF201238 WHE1769_G11_N21ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1769_G11_N21, mRNA sequence
Length = 561
Score = 95.6 bits (48), Expect = 4e-018
Identities = 156/192 (81%)
Strand = Plus / Plus
Query: 329 ctctggtcccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggc 388
|||||||| || |||||||| ||||| |||||||| ||||| | ||| | ||| | |||
Sbjct: 211 ctctggtcgccggaggaggacgagaagctcatgaaccacattgccaagtacggcaacggc 270
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| | ||||| | || || ||| | |||||||| ||||| || ||||||
Sbjct: 271 tgctggagctccatccccaagattgcaggccttgagaggtgcgggaagagctgcaggctg 330
Query: 449 aggtggataaactatctgaggccagacctcaagagaggggcattcgcccaagacgaagaa 508
|||||||||||||| |||||||| ||||||||||| || || ||| | || || || ||
Sbjct: 331 aggtggataaactacctgaggccggacctcaagaggggcgccttctcgcaggaggaggag 390
Query: 509 gacctcatcatc 520
||||||||||||
Sbjct: 391 gacctcatcatc 402
>gb|BQ789363.1|BQ789363 WHE4160_E08_I16ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4160_E08_I16, mRNA sequence
Length = 554
Score = 95.6 bits (48), Expect = 4e-018
Identities = 156/192 (81%)
Strand = Plus / Plus
Query: 329 ctctggtcccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggc 388
|||||||| || |||||||| ||||| |||||||| ||||| | ||| | ||| | |||
Sbjct: 197 ctctggtcgccggaggaggacgagaagctcatgaaccacattgccaagtacggcaacggc 256
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| | ||||| | || || ||| | |||||||| ||||| || ||||||
Sbjct: 257 tgctggagctccatccccaagattgcaggccttgagaggtgcgggaagagctgcaggctg 316
Query: 449 aggtggataaactatctgaggccagacctcaagagaggggcattcgcccaagacgaagaa 508
|||||||||||||| |||||||| ||||||||||| || || ||| | || || || ||
Sbjct: 317 aggtggataaactacctgaggccggacctcaagaggggcgccttctcgcaggaggaggag 376
Query: 509 gacctcatcatc 520
||||||||||||
Sbjct: 377 gacctcatcatc 388
>gb|CA706736.1|CA706736 wdk1c.pk024.g7 wdk1c Triticum aestivum cDNA clone wdk1c.pk024.g7 5'
end, mRNA sequence
Length = 439
Score = 81.8 bits (41), Expect = 6e-014
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 376 gcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaa 435
||| |||||||||||||||||||| || || | | |||||||| || |||||||| ||
Sbjct: 90 gcanggccatggctgctggagctcagtcccaaggcaagctgggctgcagaggtgcggcaa 149
Query: 436 gagttgtaggctgaggtggataaactatctgaggccagacctcaagag 483
||| || |||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 150 gagctgcaggctgagatggatcaactacctgaggccggacctcaagag 197
>gb|BI751774.1|BI751774 Ta01_12a10_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_12a10, mRNA
sequence
Length = 302
Score = 79.8 bits (40), Expect = 2e-013
Identities = 89/108 (82%)
Strand = Plus / Minus
Query: 376 gcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaa 435
||||||||||||||||||||| | || || | || |||||||| | | ||| || ||
Sbjct: 292 gcatggccatggctgctggagytmagtcccaagacaagctgggctgmagargtgtggcaa 233
Query: 436 gagttgtaggctgaggtggataaactatctgaggccagacctcaagag 483
||| || |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 232 gagctgcaggctgaggtggatcaactacctgaggccggacctcaagag 185
>gb|BE490486.1|BE490486 WHE0360_A09_A18ZS Wheat cold-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0360_A09_A18, mRNA
sequence
Length = 520
Score = 77.8 bits (39), Expect = 9e-013
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 554 tctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatggaac 613
|||||||||||||| ||| |||| ||||||||||| |||||||| ||||| || ||||||
Sbjct: 39 tctcaaattgcagcacagatgcctgggaggactgacaatgagattaagaacctctggaac 98
Query: 614 tcnnncatcaagnnnnnnctgaggcagaaaggcattgatcccaacaccca 663
|| | ||||| ||| ||||||| |||||||| |||||||||||
Sbjct: 99 tcgtccctcaagaagaagctgcggcagaagggcattgaccccaacaccca 148
>gb|CD877202.1|CD877202 AZO4.002G05F010503 AZO4 Triticum aestivum cDNA clone AZO4002G05,
mRNA sequence
Length = 652
Score = 75.8 bits (38), Expect = 4e-012
Identities = 137/173 (79%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 491 ttcgcccaagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacagangn 550
||||| || ||||| |||||||||||| | || || || ||||| ||||||||||| |
Sbjct: 13 ttcgctcaggacgaggaagacctcatcgttgaactccatgctgtgctcgggaacaggtgg 72
Query: 551 nnntctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgg 610
|||||||||||||| ||| |||| ||||||||||| |||||||| ||||| || |||
Sbjct: 73 ---tctcaaattgcagcacagatgcctgggaggactgacaatgagattaagaacctctgg 129
Query: 611 aactcnnncatcaagnnnnnnctgaggcagaaaggcattgatcccaacaccca 663
||||| | ||||| ||| ||||||| |||||||| ||||| |||||
Sbjct: 130 aactcgtccctcaagaagaagctgcggcagaagggcattgaccccaataccca 182
>gb|CV776467.1|CV776467 FGAS070871 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 941
Score = 73.8 bits (37), Expect = 1e-011
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 257 agctcccaggttctgcattgcgttgagatggggaggcattcttgctgctacaagcagaag 316
|||||||| | |||||||||| ||| |||| ||||||||| |||||||||||||| |
Sbjct: 379 agctcccacgctctgcattgcactgaaatggcgaggcattcgtgctgctacaagcacata 438
Query: 317 ctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatc 365
|||| ||||||||| |||||||||||| ||| | || ||||||||||
Sbjct: 439 ctgatgaaggggctcctgtcccctgaggaagattaaaatctcatgaatc 487
Score = 71.9 bits (36), Expect = 6e-011
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 24 cccctagcctttccttgctttccactgaaatctcctatctgcagccat 71
|||||| ||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 133 cccctaacctttccctgctttccactgaaatctcctatctgcaaccat 180
>gb|BQ245626.1|BQ245626 TaE15022B12R TaE15 Triticum aestivum cDNA clone TaE15022B12R, mRNA
sequence
Length = 629
Score = 60.0 bits (30), Expect = 2e-007
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 404 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 463
||||| ||||| ||||| | |||||||| ||||| || ||||||||||||| |||||
Sbjct: 225 cccaagctcgcagggctgctgaggtgcgggaagagctgcaggctgaggtggaccaactac 284
Query: 464 ctgaggccagacctcaag 481
|||||||| |||||||||
Sbjct: 285 ctgaggcccgacctcaag 302
Score = 44.1 bits (22), Expect = 0.013
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 566 gcgcagctgccagggaggactgataatgagatcaagaa 603
||||||||||| |||||||| || || |||||||||||
Sbjct: 384 gcgcagctgcccgggaggacggacaacgagatcaagaa 421
>gb|CA718492.1|CA718492 wdk5c.pk006.o19 wdk5c Triticum aestivum cDNA clone wdk5c.pk006.o19
5' end, mRNA sequence
Length = 550
Score = 60.0 bits (30), Expect = 2e-007
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 404 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 463
||||| ||||| ||||| | |||||||| ||||| || ||||||||||||| |||||
Sbjct: 218 cccaagctcgcagggctgctgaggtgcgggaagagctgcaggctgaggtggaccaactac 277
Query: 464 ctgaggccagacctcaag 481
|||||||| |||||||||
Sbjct: 278 ctgaggcccgacctcaag 295
>gb|BT008981.2| Triticum aestivum clone wdk2c.pk006.d4:fis, full insert mRNA
sequence
Length = 1199
Score = 60.0 bits (30), Expect = 2e-007
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 404 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 463
||||| ||||| ||||| | |||||||| ||||| || ||||||||||||| |||||
Sbjct: 228 cccaagctcgcagggctgctgaggtgcgggaagagctgcaggctgaggtggaccaactac 287
Query: 464 ctgaggccagacctcaag 481
|||||||| |||||||||
Sbjct: 288 ctgaggcccgacctcaag 305
>gb|CK208426.1|CK208426 FGAS020139 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1187
Score = 58.0 bits (29), Expect = 8e-007
Identities = 77/93 (82%)
Strand = Plus / Plus
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| || ||||| ||||| || || || |||||||| ||||| ||| |||||
Sbjct: 237 tgctggagctccgtgcccaagctcgccggtctgcagaggtgcggcaagagctgtcggctg 296
Query: 449 aggtggataaactatctgaggccagacctcaag 481
||||||| ||||| ||| | || |||||||||
Sbjct: 297 cggtggatcaactacctgcgccccgacctcaag 329
Score = 44.1 bits (22), Expect = 0.013
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 309 agcagaagctgagaaaggggctctggtcccctgaggaggatgagaa 354
||||||||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 157 agcagaagctgcgcaaggggctgtggtctcccgaggaggacgagaa 202
>gb|AL827602.1|AL827602 AL827602 p:638 Triticum aestivum cDNA clone F01_p638_plate_12, mRNA
sequence
Length = 574
Score = 52.0 bits (26), Expect = 5e-005
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 386 ggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtagg 445
||||||||||||||||| |||| | || || ||| | |||||||| ||||| || |||
Sbjct: 195 ggctgctggagctctgtcgccaagattgcaggccttgagaggtgcgggaagagctgcagg 254
Query: 446 ctgaggtggataaactatctga 467
||||||||||| ||||| ||||
Sbjct: 255 ctgaggtggatgaactacctga 276
>gb|CA707730.1|CA707730 wdk2c.pk006.d4 wdk2c Triticum aestivum cDNA clone wdk2c.pk006.d4 5'
end, mRNA sequence
Length = 566
Score = 52.0 bits (26), Expect = 5e-005
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 404 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 463
||||| ||||| ||||| | |||||||| ||||| || | ||||||||||| |||||
Sbjct: 223 cccaagctcgcagggctgctgaggtgcgggaagagctgcaagctgaggtggaccaactac 282
Query: 464 ctgaggccagacctcaag 481
|||||||| |||||||||
Sbjct: 283 ctgaggcccgacctcaag 300
>gb|BF484480.1|BF484480 WHE2324_A08_B16ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2324_A08_B16, mRNA sequence
Length = 345
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 296 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaa 354
||||||||| || |||||||| ||| | ||| || ||||| |||||||||||||||||
Sbjct: 160 tcttgctgcaaccagcagaaggtgaagaggggcctgtggtctcctgaggaggatgagaa 218
>gb|CA625907.1|CA625907 wl1n.pk0142.g4 wl1n Triticum aestivum cDNA clone wl1n.pk0142.g4 5'
end, mRNA sequence
Length = 328
Score = 46.1 bits (23), Expect = 0.003
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 484
||||| || ||||| || |||||||| |||| ||||| ||||||||||| ||||||||
Sbjct: 236 aggtgtggcaagagctgcaggctgagatggaccaactacttgaggccagacatcaagaga 295
Query: 485 ggg 487
|||
Sbjct: 296 ggg 298
>gb|CK210437.1|CK210437 FGAS022248 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1134
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| || ||||| ||||| || || || |||||||| ||||| || |||||
Sbjct: 294 tgctggagctccgtgcccaagctcgccggtctgcagaggtgcggcaagagctgccggctg 353
Query: 449 aggtggataaacta 462
||||||| |||||
Sbjct: 354 cggtggatcaacta 367
Score = 44.1 bits (22), Expect = 0.013
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 309 agcagaagctgagaaaggggctctggtcccctgaggaggatgagaa 354
||||||||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 214 agcagaagctgcgcaaggggctgtggtctcccgaggaggacgagaa 259
>gb|CV763246.1|CV763246 FGAS057635 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 838
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| || ||||| ||||| || || || |||||||| ||||| || |||||
Sbjct: 161 tgctggagctccgtgcccaagctcgccggtctgcagaggtgcggcaagagctgccggctg 220
Query: 449 aggtggataaacta 462
||||||| |||||
Sbjct: 221 cggtggatcaacta 234
>gb|CV764529.1|CV764529 FGAS058914 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 837
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| || ||||| ||||| || || || |||||||| ||||| || |||||
Sbjct: 161 tgctggagctccgtgcccaagctcgccggtctgcagaggtgcggcaagagctgccggctg 220
Query: 449 aggtggataaacta 462
||||||| |||||
Sbjct: 221 cggtggatcaacta 234
>gb|DR736371.1|DR736371 FGAS081741 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1105
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| || ||||| ||||| || || || |||||||| ||||| || |||||
Sbjct: 253 tgctggagctccgtgcccaagctcgccggtctgcagaggtgcggcaagagctgccggctg 312
Query: 449 aggtggataaacta 462
||||||| |||||
Sbjct: 313 cggtggatcaacta 326
Score = 44.1 bits (22), Expect = 0.013
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 309 agcagaagctgagaaaggggctctggtcccctgaggaggatgagaa 354
||||||||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 173 agcagaagctgcgcaaggggctgtggtctcccgaggaggacgagaa 218
>gb|DR741440.1|DR741440 FGAS030495 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1100
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| || ||||| ||||| || || || |||||||| ||||| || |||||
Sbjct: 73 tgctggagctccgtgcccaagctcgccggtctgcagaggtgcggcaagagctgccggctg 132
Query: 449 aggtggataaacta 462
||||||| |||||
Sbjct: 133 cggtggatcaacta 146
>gb|DR741480.1|DR741480 FGAS030535 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1108
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 389 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctg 448
||||||||||| || ||||| ||||| || || || |||||||| ||||| || |||||
Sbjct: 70 tgctggagctccgtgcccaagctcgccggtctgcagaggtgcggcaagagctgccggctg 129
Query: 449 aggtggataaacta 462
||||||| |||||
Sbjct: 130 cggtggatcaacta 143
>gb|BQ483726.1|BQ483726 WHE3511_H07_P13ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3511_H07_P13, mRNA sequence
Length = 755
Score = 42.1 bits (21), Expect = 0.050
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaag 481
|||||||| || || |||||||| || ||| | ||||||||||||||| || |||||
Sbjct: 375 aggtgcggcaaaagctgtaggctcagatggctcaactatctgaggccaaacatcaag 431
>gb|CA728684.1|CA728684 wdi1c.pk004.b4 wdi1c Triticum aestivum cDNA clone wdi1c.pk004.b4 5'
end, mRNA sequence
Length = 628
Score = 42.1 bits (21), Expect = 0.050
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaag 481
|||||||| || || |||||||| || ||| | ||||||||||||||| || |||||
Sbjct: 347 aggtgcggcaaaagctgtaggctcagatggctcaactatctgaggccaaacatcaag 403
>gb|CD936130.1|CD936130 OV.103L22F010205 OV Triticum aestivum cDNA clone OV103L22, mRNA
sequence
Length = 698
Score = 42.1 bits (21), Expect = 0.050
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 571 gctgccagggaggactgataatgagatcaagaa 603
||||||||||||||| || || |||||||||||
Sbjct: 416 gctgccagggaggacggacaacgagatcaagaa 448
>gb|BE489625.1|BE489625 WHE1071-1074_O10_O10ZS Wheat unstressed seedling shoot normalized
cDNA library Triticum aestivum cDNA clone
WHE1071-1074_O10_O10, mRNA sequence
Length = 327
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 323 aaggggctctggtcccctgaggaggatgagaa 354
|||||||| ||||| ||||||||||| |||||
Sbjct: 56 aaggggctgtggtcgcctgaggaggacgagaa 87
>gb|BJ255988.1|BJ255988 BJ255988 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh3e18 5', mRNA sequence
Length = 583
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggat 456
|||||||| ||||| || ||||||||||||||
Sbjct: 280 aggtgcgggaagagctgcaggctgaggtggat 311
>gb|CD895005.1|CD895005 G118.127L17F010824 G118 Triticum aestivum cDNA clone G118127L17,
mRNA sequence
Length = 596
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 323 aaggggctctggtcccctgaggaggatgagaa 354
|||||||| ||||| ||||||||||| |||||
Sbjct: 108 aaggggctgtggtcgcctgaggaggacgagaa 139
>gb|CK162489.1|CK162489 FGAS015084 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1010
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 323 aaggggctctggtcccctgaggaggatgagaa 354
|||||||| ||||| ||||||||||| |||||
Sbjct: 167 aaggggctgtggtcgcctgaggaggacgagaa 198
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 130,916
Number of Sequences: 636343
Number of extensions: 130916
Number of successful extensions: 36270
Number of sequences better than 0.5: 38
Number of HSP's better than 0.5 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36177
Number of HSP's gapped (non-prelim): 79
length of query: 687
length of database: 367,240,239
effective HSP length: 19
effective length of query: 668
effective length of database: 355,149,722
effective search space: 237240014296
effective search space used: 237240014296
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)