BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBE1h10.xg.2.1
(463 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ238394.1|BQ238394 TaE05004F12F TaE05 Triticum aestivum... 84 1e-014
gb|BQ904130.1|BQ904130 Ta03_21a09_R Ta03_AAFC_ECORC_Fusariu... 84 1e-014
gb|BQ904316.1|BQ904316 Ta04_02d09_R Ta04_AAFC_ECORC_Fusariu... 84 1e-014
gb|BJ217449.1|BJ217449 BJ217449 Y. Ogihara unpublished cDNA... 84 1e-014
gb|BJ252919.1|BJ252919 BJ252919 Y. Ogihara unpublished cDNA... 84 1e-014
gb|BJ259143.1|BJ259143 BJ259143 Y. Ogihara unpublished cDNA... 84 1e-014
gb|BJ263365.1|BJ263365 BJ263365 Y. Ogihara unpublished cDNA... 84 1e-014
gb|BJ264528.1|BJ264528 BJ264528 Y. Ogihara unpublished cDNA... 84 1e-014
gb|BJ268692.1|BJ268692 BJ268692 Y. Ogihara unpublished cDNA... 84 1e-014
gb|BJ276420.1|BJ276420 BJ276420 Y. Ogihara unpublished cDNA... 84 1e-014
gb|CA630507.1|CA630507 wle1n.pk0036.c11 wle1n Triticum aest... 84 1e-014
gb|CD887453.1|CD887453 G118.105D24F010606 G118 Triticum aes... 84 1e-014
gb|CD887454.1|CD887454 G118.105D24R010924 G118 Triticum aes... 84 1e-014
gb|CD927242.1|CD927242 GR45.101I02F010315 GR45 Triticum aes... 84 1e-014
gb|CD927384.1|CD927384 GR45.101P13R010607 GR45 Triticum aes... 84 1e-014
gb|CD928207.1|CD928207 GR45.104E09R010608 GR45 Triticum aes... 84 1e-014
gb|CD928343.1|CD928343 GR45.104J20F010319 GR45 Triticum aes... 84 1e-014
gb|CA702251.1|CA702251 wdk1c.pk0001.h3 wdk1c Triticum aesti... 82 4e-014
gb|BJ246947.1|BJ246947 BJ246947 Y. Ogihara unpublished cDNA... 78 6e-013
gb|CD879043.1|CD879043 AZO4.104D21R011122 AZO4 Triticum aes... 76 2e-012
gb|AL809035.1|AL809035 AL809035 a:22 Triticum aestivum cDNA... 74 9e-012
gb|BJ230557.1|BJ230557 BJ230557 Y. Ogihara unpublished cDNA... 72 4e-011
gb|BQ743321.1|BQ743321 WHE4102_F07_K14ZS Wheat salt-stresse... 72 4e-011
gb|CD876061.1|CD876061 AZO3.108G20F011009 AZO3 Triticum aes... 70 1e-010
gb|CA609432.1|CA609432 wr1.pk0104.b11 wr1 Triticum aestivum... 68 6e-010
gb|CK167104.1|CK167104 FGAS051386 Triticum aestivum FGAS: T... 68 6e-010
gb|CV762859.1|CV762859 FGAS057248 Triticum aestivum FGAS: L... 68 6e-010
gb|BJ230527.1|BJ230527 BJ230527 Y. Ogihara unpublished cDNA... 66 2e-009
gb|CA667790.1|CA667790 wlsu1.pk015.k19 wlsu1 Triticum aesti... 64 9e-009
gb|DR740232.1|DR740232 FGAS085160 Triticum aestivum FGAS: L... 62 4e-008
gb|CA670235.1|CA670235 wlsu1.pk025.h22 wlsu1 Triticum aesti... 60 1e-007
gb|CA670144.1|CA670144 wlsu1.pk025.c5 wlsu1 Triticum aestiv... 56 2e-006
gb|CK200747.1|CK200747 FGAS009264 Triticum aestivum FGAS: L... 56 2e-006
gb|BQ236023.1|BQ236023 TaE05039D11F TaE05 Triticum aestivum... 52 3e-005
gb|BQ805400.1|BQ805400 WHE3566_E04_J08ZS Wheat developing g... 52 3e-005
gb|BJ274563.1|BJ274563 BJ274563 Y. Ogihara unpublished cDNA... 52 3e-005
gb|CD927343.1|CD927343 GR45.101N17R010607 GR45 Triticum aes... 52 3e-005
gb|CB307225.1|CB307225 HFIG210 Hessian fly infested cDNA li... 52 3e-005
gb|CN009006.1|CN009006 WHE2647_G01_N01ZE Wheat Fusarium gra... 52 3e-005
gb|CF133880.1|CF133880 WHE4364_G07_M14ZT Wheat meiotic flor... 50 1e-004
gb|BQ800652.1|BQ800652 WHE2801_B10_C19ZS Triticum monococcu... 48 5e-004
gb|BF201051.1|BF201051 WHE0817-0821_K21_K21ZS Wheat vernali... 46 0.002
gb|BM138330.1|BM138330 WHE0491_D02_G03ZS Wheat Fusarium gra... 46 0.002
gb|BJ243063.1|BJ243063 BJ243063 Y. Ogihara unpublished cDNA... 46 0.002
gb|BJ259725.1|BJ259725 BJ259725 Y. Ogihara unpublished cDNA... 46 0.002
gb|BJ265446.1|BJ265446 BJ265446 Y. Ogihara unpublished cDNA... 46 0.002
gb|CA607088.1|CA607088 wr1.pk0064.e9 wr1 Triticum aestivum ... 46 0.002
gb|CA661597.1|CA661597 wlmk1.pk0001.f1 wlmk1 Triticum aesti... 46 0.002
gb|CA668791.1|CA668791 wlsu1.pk023.g5 wlsu1 Triticum aestiv... 46 0.002
gb|AJ601751.1|AJ601751 AJ601751 T05 Triticum aestivum cDNA ... 46 0.002
gb|CK163785.1|CK163785 FGAS016418 Triticum aestivum FGAS: L... 46 0.002
gb|CK198934.1|CK198934 FGAS007423 Triticum aestivum FGAS: L... 46 0.002
gb|CV763409.1|CV763409 FGAS057798 Triticum aestivum FGAS: L... 46 0.002
gb|DR733400.1|DR733400 FGAS079158 Triticum aestivum FGAS: L... 46 0.002
gb|DR735696.1|DR735696 FGAS081330 Triticum aestivum FGAS: L... 46 0.002
gb|DR737083.1|DR737083 FGAS023361 Triticum aestivum FGAS: L... 46 0.002
gb|CD873629.1|CD873629 AZO3.100F01F010925 AZO3 Triticum aes... 42 0.033
gb|BM135924.1|BM135924 WHE2603_B12_D23ZS Wheat Fusarium gra... 40 0.13
gb|CA501604.1|CA501604 WHE4036_C11_F22ZT Wheat meiotic anth... 40 0.13
gb|CA667003.1|CA667003 wlsu1.pk0009.g9 wlsu1 Triticum aesti... 40 0.13
>gb|BQ238394.1|BQ238394 TaE05004F12F TaE05 Triticum aestivum cDNA clone TaE05004F12F, mRNA
sequence
Length = 559
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 493 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctccc 434
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 433 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 375
>gb|BQ904130.1|BQ904130 Ta03_21a09_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_21a09, mRNA
sequence
Length = 607
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 294 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 235
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 234 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 176
>gb|BQ904316.1|BQ904316 Ta04_02d09_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_02d09, mRNA
sequence
Length = 330
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 294 tgattgatcggtccgtggtcgagagcttcggggccggaggcaggacatgcatcctctcac 235
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 234 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 176
>gb|BJ217449.1|BJ217449 BJ217449 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh16o13 3', mRNA sequence
Length = 549
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 369 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 310
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 309 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 251
>gb|BJ252919.1|BJ252919 BJ252919 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf26i03 3', mRNA sequence
Length = 576
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 414 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 355
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 354 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 296
>gb|BJ259143.1|BJ259143 BJ259143 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh15c08 5', mRNA sequence
Length = 623
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 348 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctccc 407
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 408 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 466
>gb|BJ263365.1|BJ263365 BJ263365 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh15c08 3', mRNA sequence
Length = 528
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 380 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctccc 321
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 320 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 262
>gb|BJ264528.1|BJ264528 BJ264528 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh14l16 3', mRNA sequence
Length = 631
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 487 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctccc 428
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 427 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 369
>gb|BJ268692.1|BJ268692 BJ268692 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh18c24 5', mRNA sequence
Length = 476
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 32 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctccc 91
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 92 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 150
>gb|BJ276420.1|BJ276420 BJ276420 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh18c24 3', mRNA sequence
Length = 438
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 418 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctccc 359
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 358 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 300
>gb|CA630507.1|CA630507 wle1n.pk0036.c11 wle1n Triticum aestivum cDNA clone
wle1n.pk0036.c11 5' end, mRNA sequence
Length = 557
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 115 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctccc 174
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 175 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 233
>gb|CD887453.1|CD887453 G118.105D24F010606 G118 Triticum aestivum cDNA clone G118105D24,
mRNA sequence
Length = 566
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 406 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 465
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 466 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 524
>gb|CD887454.1|CD887454 G118.105D24R010924 G118 Triticum aestivum cDNA clone G118105D24,
mRNA sequence
Length = 680
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 429 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 370
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 369 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 311
>gb|CD927242.1|CD927242 GR45.101I02F010315 GR45 Triticum aestivum cDNA clone GR45101I02,
mRNA sequence
Length = 780
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 430 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 489
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 490 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 548
>gb|CD927384.1|CD927384 GR45.101P13R010607 GR45 Triticum aestivum cDNA clone GR45101P13,
mRNA sequence
Length = 570
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 435 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 376
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 375 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 317
>gb|CD928207.1|CD928207 GR45.104E09R010608 GR45 Triticum aestivum cDNA clone GR45104E09,
mRNA sequence
Length = 554
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 495 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 436
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 435 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 377
>gb|CD928343.1|CD928343 GR45.104J20F010319 GR45 Triticum aestivum cDNA clone GR45104J20,
mRNA sequence
Length = 445
Score = 83.8 bits (42), Expect = 1e-014
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 39 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctccc 98
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 99 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 157
>gb|CA702251.1|CA702251 wdk1c.pk0001.h3 wdk1c Triticum aestivum cDNA clone wdk1c.pk0001.h3
5' end, mRNA sequence
Length = 405
Score = 81.8 bits (41), Expect = 4e-014
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 197 gatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcacgggtg 256
||||||||| |||||||||||||| || ||||||| ||| |||||||| || |||||
Sbjct: 194 gatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcctctcccgggtc 253
Query: 257 tacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|| ||| || ||||| | || ||| |||||||||| |||||||||||||||||
Sbjct: 254 tatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacggc 307
>gb|BJ246947.1|BJ246947 BJ246947 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf26i03 5', mRNA sequence
Length = 685
Score = 77.8 bits (39), Expect = 6e-013
Identities = 100/120 (83%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 398 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 457
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctct-acgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || | |||||||||||||||||
Sbjct: 458 gggtctatccgaccctcgccctaggcaagaacgctcatctttcacgttttcaacaacggc 517
>gb|CD879043.1|CD879043 AZO4.104D21R011122 AZO4 Triticum aestivum cDNA clone AZO4104D21,
mRNA sequence
Length = 612
Score = 75.8 bits (38), Expect = 2e-012
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 434 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctctc 375
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || |||||||||||||||||
Sbjct: 374 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgttttcaacaacggc 316
>gb|AL809035.1|AL809035 AL809035 a:22 Triticum aestivum cDNA clone D08_a22_plate_13, mRNA
sequence
Length = 463
Score = 73.8 bits (37), Expect = 9e-012
Identities = 97/118 (82%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| ||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 346 tgattgatcggtccgtgctcgagagcttcggggcaggaggcaggacctgcatcctctccc 405
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacgg 309
|||| || ||| || ||||| | || ||| |||||||||| ||||||||||||||||
Sbjct: 406 gggtctatccgaccctcgccctaggcaagaacgctcaccttcacgttttcaacaacgg 463
>gb|BJ230557.1|BJ230557 BJ230557 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl23d06 3', mRNA sequence
Length = 640
Score = 71.9 bits (36), Expect = 4e-011
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 185 agaagcttgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatc 244
|||||||||||||| || || || |||||||||||||| ||||| ||||| ||||||
Sbjct: 403 agaagcttgatcgaccgatcggtggttgagagcttcggcgccggagggaagacctgcatc 344
Query: 245 ctgtcacgggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaac 304
|| || | |||||||| ||||| || ||||||| ||||| ||||| || || ||||||
Sbjct: 343 ctatcgagagtgtacccatccatggcgatcgggaaagacgcacacctttatgtgttcaac 284
Query: 305 aacgg 309
|||||
Sbjct: 283 aacgg 279
>gb|BQ743321.1|BQ743321 WHE4102_F07_K14ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4102_F07_K14, mRNA sequence
Length = 612
Score = 71.9 bits (36), Expect = 4e-011
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 185 agaagcttgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatc 244
|||||||||||||| || || || |||||||||||||| ||||| ||||| ||||||
Sbjct: 192 agaagcttgatcgaccgatcggtggttgagagcttcggcgccggagggaagacctgcatc 251
Query: 245 ctgtcacgggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaac 304
|| || | |||||||| ||||| || ||||||| ||||| ||||| || || ||||||
Sbjct: 252 ctatcgagagtgtacccatccatggcgatcgggaaagacgcacacctttatgtgttcaac 311
Query: 305 aacgg 309
|||||
Sbjct: 312 aacgg 316
>gb|CD876061.1|CD876061 AZO3.108G20F011009 AZO3 Triticum aestivum cDNA clone AZO3108G20,
mRNA sequence
Length = 734
Score = 69.9 bits (35), Expect = 1e-010
Identities = 99/120 (82%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| |||||||||||||| || ||||||| ||| |||||||| ||||
Sbjct: 403 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacatgcatcctctcac 462
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacg-ttttcaacaacggc 310
|||| || ||| || ||||| | || ||| ||||||| || ||| ||||||||||||||
Sbjct: 463 gggtctatccgaccctcgccctaggcaagaacgctcatcttcacgtttttcaacaacggc 522
>gb|CA609432.1|CA609432 wr1.pk0104.b11 wr1 Triticum aestivum cDNA clone wr1.pk0104.b11 5'
end, mRNA sequence
Length = 369
Score = 67.9 bits (34), Expect = 6e-010
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 212 gagagcttcggcgcgggaggcaagacgtgcatcctgtcacgggtgtacccgtccatcgcc 271
|||||||||||||| ||||| ||||| |||||||| || | |||||||| ||||| ||
Sbjct: 16 gagagcttcggcgccggagggaagacctgcatcctatcgagagtgtacccatccatggcg 75
Query: 272 gtcgggaaggacgctcacctctacgttttcaacaacgg 309
||||||| ||||| ||||| || || |||||||||||
Sbjct: 76 atcgggaaagacgcacacctttatgtgttcaacaacgg 113
>gb|CK167104.1|CK167104 FGAS051386 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1219
Score = 67.9 bits (34), Expect = 6e-010
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 212 gagagcttcggcgcgggaggcaagacgtgcatcctgtcacgggtgtacccgtccatcgcc 271
|||||||||||||| ||||| ||||| |||||||| || | |||||||| ||||| ||
Sbjct: 473 gagagcttcggcgccggagggaagacctgcatcctatcgagagtgtacccatccatggcg 414
Query: 272 gtcgggaaggacgctcacctctacgttttcaacaacgg 309
||||||| ||||| ||||| || || |||||||||||
Sbjct: 413 atcgggaaagacgcacacctttatgtgttcaacaacgg 376
>gb|CV762859.1|CV762859 FGAS057248 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 830
Score = 67.9 bits (34), Expect = 6e-010
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 212 gagagcttcggcgcgggaggcaagacgtgcatcctgtcacgggtgtacccgtccatcgcc 271
|||||||||||||| ||||| ||||| |||||||| || | |||||||| ||||| ||
Sbjct: 124 gagagcttcggcgccggagggaagacctgcatcctatcgagagtgtacccatccatggcg 183
Query: 272 gtcgggaaggacgctcacctctacgttttcaacaacgg 309
||||||| ||||| ||||| || || |||||||||||
Sbjct: 184 atcgggaaagacgcacacctttatgtgttcaacaacgg 221
>gb|BJ230527.1|BJ230527 BJ230527 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl23b10 3', mRNA sequence
Length = 339
Score = 65.9 bits (33), Expect = 2e-009
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 185 agaagcttgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatc 244
|||||||||||||| || || || |||||||||||||| | ||| ||||| ||||||
Sbjct: 327 agaagcttgatcgaccgatcggtggttgagagcttcggcgccgnagggaagacctgcatc 268
Query: 245 ctgtcacgggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaac 304
|| || | |||||||| ||||| || ||||||| ||||| ||||| || || ||||||
Sbjct: 267 ctatcgagagtgtacccatccatggcgatcgggaaagacgcacacctttatgtgttcaac 208
Query: 305 aacgg 309
|||||
Sbjct: 207 aacgg 203
>gb|CA667790.1|CA667790 wlsu1.pk015.k19 wlsu1 Triticum aestivum cDNA clone wlsu1.pk015.k19
5' end, mRNA sequence
Length = 514
Score = 63.9 bits (32), Expect = 9e-009
Identities = 101/125 (80%)
Strand = Plus / Plus
Query: 185 agaagcttgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatc 244
|||||||||||||| || || || |||||||||||||| ||||| ||||| |||||
Sbjct: 69 agaagcttgatcgaccgatcggtggttgagagcttcggcgccggagggaagacctgcatt 128
Query: 245 ctgtcacgggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaac 304
|| || | |||||||| ||||| || ||||||| ||||| ||||| || || ||||||
Sbjct: 129 ctatcgagagtgtacccatccatggcgatcgggaaagacgcacacctttatgtgttcaac 188
Query: 305 aacgg 309
|||||
Sbjct: 189 aacgg 193
>gb|DR740232.1|DR740232 FGAS085160 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 475
Score = 61.9 bits (31), Expect = 4e-008
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 216 gcttcggcgcgggaggcaagacgtgcatcctgtcacgggtgtacccgtccatcgccgtcg 275
||||||| || ||||||| ||| |||||||| |||||||| || ||| || ||||| | |
Sbjct: 65 gcttcggggcaggaggcaggacatgcatcctctcacgggtctatccgaccctcgccctag 124
Query: 276 ggaaggacgctcacctctacgttttcaacaacggc 310
| ||| ||||||| || |||||||||||||||||
Sbjct: 125 gcaagaacgctcatcttcacgttttcaacaacggc 159
>gb|CA670235.1|CA670235 wlsu1.pk025.h22 wlsu1 Triticum aestivum cDNA clone wlsu1.pk025.h22
5' end, mRNA sequence
Length = 461
Score = 60.0 bits (30), Expect = 1e-007
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 212 gagagcttcggcgcgggaggcaagacgtgcatcctgtcacgggtgtacccgtccatcgcc 271
|||||||||||| | ||||| ||||| |||||||| || | |||||||| ||||| ||
Sbjct: 427 gagagcttcggccccggagggaagacctgcatcctatcgagagtgtacccatccatggcg 368
Query: 272 gtcgggaaggacgctcacctctacgttttcaacaacgg 309
||||||| ||||| ||||| || || |||||||||||
Sbjct: 367 atcgggaaagacgcacacctttatgtgttcaacaacgg 330
>gb|CA670144.1|CA670144 wlsu1.pk025.c5 wlsu1 Triticum aestivum cDNA clone wlsu1.pk025.c5 5'
end, mRNA sequence
Length = 450
Score = 56.0 bits (28), Expect = 2e-006
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 212 gagagcttcggcgcgggaggcaagacgtgcatcctgtcacgggtgtacccgtccatcgcc 271
||||||||||| || ||||| ||||| |||||||| || | |||||||| |||| ||
Sbjct: 423 gagagcttcggtgccggagggaagacctgcatcctatcgngagtgtacccanccatggcg 364
Query: 272 gtcgggaaggacgctcacctctacgttttcaacaacgg 309
||||||| ||||| ||||| || || |||||||||||
Sbjct: 363 atcgggaaagacgcacacctttatgtgttcaacaacgg 326
>gb|CK200747.1|CK200747 FGAS009264 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 56.0 bits (28), Expect = 2e-006
Identities = 100/125 (80%)
Strand = Plus / Minus
Query: 185 agaagcttgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatc 244
|||||||||||||| || || || |||||||||||||| ||||| | ||| ||||||
Sbjct: 533 agaagcttgatcgaccgttcggtggttgagagcttcggcgccggagggaggacctgcatc 474
Query: 245 ctgtcacgggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaac 304
|| || | |||||||| ||||| || ||||||| ||||| || || |||| ||||||
Sbjct: 473 ctatcgagagtgtacccatccatggcgatcgggaaagacgcgcatcttcacgtgttcaac 414
Query: 305 aacgg 309
|||||
Sbjct: 413 aacgg 409
Score = 46.1 bits (23), Expect = 0.002
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 344 tgggagatgaagaaaccnctgatgaacggcgcct 377
|||||||||||||| || |||||||||||||||
Sbjct: 374 tgggagatgaagaagccgatgatgaacggcgcct 341
>gb|BQ236023.1|BQ236023 TaE05039D11F TaE05 Triticum aestivum cDNA clone TaE05039D11F, mRNA
sequence
Length = 589
Score = 52.0 bits (26), Expect = 3e-005
Identities = 95/119 (79%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| ||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 437 tgattgatcggtccgtcatcgagagcttcggggcaggaggcaggacctgcatcctctccc 378
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || || | ||||| | || ||| |||||||||| | |||||||||||||||
Sbjct: 377 gggtttatccaacgctcgccctaggcaagaacgctcaccttcatgttttcaacaacggc 319
>gb|BQ805400.1|BQ805400 WHE3566_E04_J08ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3566_E04_J08, mRNA sequence
Length = 710
Score = 52.0 bits (26), Expect = 3e-005
Identities = 95/119 (79%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| ||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 465 tgattgatcggtccgtcatcgagagcttcggggcaggaggcaggacctgcatcctctccc 524
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || || | ||||| | || ||| |||||||||| | |||||||||||||||
Sbjct: 525 gggtttatccaacgctcgccctaggcaagaacgctcaccttcatgttttcaacaacggc 583
>gb|BJ274563.1|BJ274563 BJ274563 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22m01 3', mRNA sequence
Length = 573
Score = 52.0 bits (26), Expect = 3e-005
Identities = 95/119 (79%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| ||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 359 tgattgatcggtccgtcatcgagagcttcggggcaggaggcaggacctgcatcctctccc 300
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || || | ||||| | || ||| |||||||||| | |||||||||||||||
Sbjct: 299 gggtttatccaacgctcgccctaggcaagaacgctcaccttcatgttttcaacaacggc 241
>gb|CD927343.1|CD927343 GR45.101N17R010607 GR45 Triticum aestivum cDNA clone GR45101N17,
mRNA sequence
Length = 527
Score = 52.0 bits (26), Expect = 3e-005
Identities = 95/119 (79%)
Strand = Plus / Minus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| ||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 389 tgattgatcggtccgtcatcgagagcttcggggcaggaggcaggacctgcatcctctccc 330
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || || | ||||| | || ||| |||||||||| | |||||||||||||||
Sbjct: 329 gggtttatccaacgctcgccctaggcaagaacgctcaccttcatgttttcaacaacggc 271
>gb|CB307225.1|CB307225 HFIG210 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 622
Score = 52.0 bits (26), Expect = 3e-005
Identities = 95/119 (79%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcctgtcac 251
|||| ||||||||| ||||||||||||| || ||||||| ||| |||||||| || |
Sbjct: 208 tgattgatcggtccgtcatcgagagcttcggggcaggaggcaggacctgcatcctctccc 267
Query: 252 gggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|||| || || | ||||| | || ||| |||||||||| | |||||||||||||||
Sbjct: 268 gggtttatccaacgctcgccctaggcaagaacgctcaccttcatgttttcaacaacggc 326
>gb|CN009006.1|CN009006 WHE2647_G01_N01ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2647_G01_N01,
mRNA sequence
Length = 565
Score = 52.0 bits (26), Expect = 3e-005
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 192 tgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatcct 246
|||| ||||||||| |||||||||||||| || ||||||| ||| ||||||||
Sbjct: 485 tgattgatcggtccgtggtcgagagcttcggggcaggaggcaggacctgcatcct 539
>gb|CF133880.1|CF133880 WHE4364_G07_M14ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4364_G07_M14, mRNA sequence
Length = 442
Score = 50.1 bits (25), Expect = 1e-004
Identities = 82/101 (81%)
Strand = Plus / Plus
Query: 210 tcgagagcttcggcgcgggaggcaagacgtgcatcctgtcacgggtgtacccgtccatcg 269
||||||||||||| || ||||||| ||| |||||||| || ||||| || || | |||
Sbjct: 25 tcgagagcttcggggcaggaggcaggacctgcatcctctcccgggtttatccaacgctcg 84
Query: 270 ccgtcgggaaggacgctcacctctacgttttcaacaacggc 310
|| | || ||| |||||||||| | |||||||||||||||
Sbjct: 85 ccctaggcaagaacgctcaccttcatgttttcaacaacggc 125
>gb|BQ800652.1|BQ800652 WHE2801_B10_C19ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2801_B10_C19, mRNA
sequence
Length = 564
Score = 48.1 bits (24), Expect = 5e-004
Identities = 99/125 (79%)
Strand = Plus / Minus
Query: 185 agaagcttgatcgatcggtccnnngtcgagagcttcggcgcgggaggcaagacgtgcatc 244
|||||||||||||| || || || |||||||||||||| ||||| || || ||||||
Sbjct: 271 agaagcttgatcgaccgttcggtggttgagagcttcggcgccggagggaatacctgcatc 212
Query: 245 ctgtcacgggtgtacccgtccatcgccgtcgggaaggacgctcacctctacgttttcaac 304
|| || | |||||||| ||||| || |||||| ||||| || || ||||| || |||
Sbjct: 211 ctatcgagagtgtacccatccatggcgatcgggacagacgcgcatctttacgtgtttaac 152
Query: 305 aacgg 309
|||||
Sbjct: 151 aacgg 147
>gb|BF201051.1|BF201051 WHE0817-0821_K21_K21ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0817-0821_K21_K21, mRNA sequence
Length = 398
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 caaggtgctcatgtgcaccgacc 95
|||||||||||||||||||||||
Sbjct: 129 caaggtgctcatgtgcaccgacc 151
>gb|BM138330.1|BM138330 WHE0491_D02_G03ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0491_D02_G03,
mRNA sequence
Length = 572
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 caaggtgctcatgtgcaccgacc 95
|||||||||||||||||||||||
Sbjct: 533 caaggtgctcatgtgcaccgacc 555
>gb|BJ243063.1|BJ243063 BJ243063 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe25p18 3', mRNA sequence
Length = 656
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 caaggtgctcatgtgcaccgacc 95
|||||||||||||||||||||||
Sbjct: 242 caaggtgctcatgtgcaccgacc 264
>gb|BJ259725.1|BJ259725 BJ259725 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21p18 5', mRNA sequence
Length = 661
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 caaggtgctcatgtgcaccgacc 95
|||||||||||||||||||||||
Sbjct: 249 caaggtgctcatgtgcaccgacc 271
>gb|BJ265446.1|BJ265446 BJ265446 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21p18 3', mRNA sequence
Length = 729
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 73 caaggtgctcatgtgcaccgacc 95
|||||||||||||||||||||||
Sbjct: 656 caaggtgctcatgtgcaccgacc 634
>gb|CA607088.1|CA607088 wr1.pk0064.e9 wr1 Triticum aestivum cDNA clone wr1.pk0064.e9 5'
end, mRNA sequence
Length = 339
Score = 46.1 bits (23), Expect = 0.002
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 212 gagagcttcggcgcgggaggcaagacgtgcatcct 246
|||||||||||||| ||||| ||||| ||||||||
Sbjct: 16 gagagcttcggcgccggagggaagacctgcatcct 50
>gb|CA661597.1|CA661597 wlmk1.pk0001.f1 wlmk1 Triticum aestivum cDNA clone
wlmk1.pk0001.f1 5' end, mRNA sequence
Length = 325
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 caaggtgctcatgtgcaccgacc 95
|||||||||||||||||||||||
Sbjct: 41 caaggtgctcatgtgcaccgacc 63
>gb|CA668791.1|CA668791 wlsu1.pk023.g5 wlsu1 Triticum aestivum cDNA clone wlsu1.pk023.g5 5'
end, mRNA sequence
Length = 475
Score = 46.1 bits (23), Expect = 0.002
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 227 ggaggcaagacgtgcatcctgtcacgggtgtacccgtccatcgccgtcgggaaggacgct 286
||||| ||||| |||||||| || | |||||||| ||||| || ||||||| |||||
Sbjct: 423 ggagggaagacctgcatcctatcgagagtgtacccatccatggcgatcgggaaagacgca 364
Query: 287 cacctctacgttttcaacaacgg 309
||||| || || |||||||||||
Sbjct: 363 cacctttatgtgttcaacaacgg 341
>gb|AJ601751.1|AJ601751 AJ601751 T05 Triticum aestivum cDNA clone E05_T05_plate_1, mRNA
sequence
Length = 468
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 caaggtgctcatgtgcaccgacc 95
|||||||||||||||||||||||
Sbjct: 47 caaggtgctcatgtgcaccgacc 69
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 80,133
Number of Sequences: 636343
Number of extensions: 80133
Number of successful extensions: 29525
Number of sequences better than 0.5: 60
Number of HSP's better than 0.5 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29330
Number of HSP's gapped (non-prelim): 181
length of query: 463
length of database: 367,240,239
effective HSP length: 19
effective length of query: 444
effective length of database: 355,149,722
effective search space: 157686476568
effective search space used: 157686476568
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)