BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBD3a09.xg.3.1
(1105 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF474111.1|BF474111 WHE0838_C01_E02ZS Wheat vernalized c... 587 e-166
gb|AJ611364.1|AJ611364 AJ611364 Triticum turgidum subsp. du... 549 e-154
gb|CK214852.1|CK214852 FGAS026793 Triticum aestivum FGAS: L... 535 e-150
gb|CV769654.1|CV769654 FGAS064046 Triticum aestivum FGAS: L... 500 e-139
gb|CK210327.1|CK210327 FGAS022132 Triticum aestivum FGAS: L... 468 e-130
gb|BE516786.1|BE516786 WHE620_G09_N18ZA Wheat ABA-treated e... 361 7e-098
gb|CV781292.1|CV781292 FGAS075703 Triticum aestivum FGAS: L... 355 4e-096
gb|CD937712.1|CD937712 OV.107O11F010206 OV Triticum aestivu... 349 3e-094
gb|BE405492.1|BE405492 WHE1216_H12_P24ZS Wheat etiolated se... 339 2e-091
gb|CA499466.1|CA499466 WHE4007_G10_N19ZT Wheat meiotic anth... 339 2e-091
gb|BG312646.1|BG312646 WHE2456_C09_E18ZS Triticum monococcu... 268 8e-070
gb|CV768545.1|CV768545 FGAS062936 Triticum aestivum FGAS: L... 208 6e-052
gb|CA653873.1|CA653873 wre1n.pk192.b2 wre1n Triticum aestiv... 206 2e-051
gb|BQ170890.1|BQ170890 WHE2311_E04_J07ZT Wheat pre-anthesis... 192 4e-047
gb|BE446032.1|BE446032 WHE1148_A10_B20ZS Wheat etiolated se... 190 1e-046
gb|CA665967.1|CA665967 wlk1.pk0023.c8 wlk1 Triticum aestivu... 157 2e-036
gb|BF485421.1|BF485421 WHE2311_E04_J07ZS Wheat pre-anthesis... 131 1e-028
gb|CA638868.1|CA638868 wre1n.pk0017.d5 wre1n Triticum aesti... 131 1e-028
gb|CA678848.1|CA678848 wlm4.pk0012.f2 wlm4 Triticum aestivu... 129 4e-028
gb|BE446424.1|BE446424 WHE1457_E11_J21ZS Wheat etiolated se... 44 0.020
gb|BQ752632.1|BQ752632 WHE4117_D02_G03ZS Wheat salt-stresse... 44 0.020
gb|CA595556.1|CA595556 wpa1c.pk010.p7 wpa1c Triticum aestiv... 44 0.020
gb|CA633357.1|CA633357 wle1n.pk0069.e2 wle1n Triticum aesti... 44 0.020
gb|CA665228.1|CA665228 wlk1.pk0014.d4 wlk1 Triticum aestivu... 44 0.020
gb|CA745695.1|CA745695 wri2s.pk002.o22 wri2s Triticum aesti... 44 0.020
gb|CA622380.1|CA622380 wl1n.pk0091.f5 wl1n Triticum aestivu... 40 0.32
gb|CA696891.1|CA696891 wlk4.pk0009.f7 wlk4 Triticum aestivu... 40 0.32
>gb|BF474111.1|BF474111 WHE0838_C01_E02ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0838_C01_E02, mRNA sequence
Length = 661
Score = 587 bits (296), Expect = e-166
Identities = 566/656 (86%)
Strand = Plus / Plus
Query: 129 ggcggcggcggtgcggcgagcggaggagctggtggagagggagatgggcgggcgcgatgc 188
|||||||||||||||| | || ||||||||||| |||||||||||| |||||||||| ||
Sbjct: 6 ggcggcggcggtgcggtgtgctgaggagctggttgagagggagatgagcgggcgcgacgc 65
Query: 189 ctcccacgacgccgcgcacgcgctccgcgtccgagaccttgcgctctcgctcgcagccga 248
||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 66 ctcccacgacgccgcccacgcgctccgcgtccgggacctcgcgctctccctcgccgccga 125
Query: 249 agagggcctctccgctcccgaccgcctcctcaccgtggaactggccgctctcctgcacga 308
||||| ||||| | |||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 126 gcagggcgtctcctcccccgaccgcctcctcatcgtggaactggctgctctcctgcacga 185
Query: 309 cgttggagattacaagtataccaagaacaatgtggaggatatgagcgtcgttgagatgtt 368
| | || ||||||||||| |||||| | |||||||||||||||||| | || | | |||
Sbjct: 186 catcggtgattacaagtacaccaaggataatgtggaggatatgagcattgtcaaaaggtt 245
Query: 369 tcttcaagaggtaggattggatgaaggccaaaaggatgaaatagtggcaattattaaggg 428
|||| |||||||||| ||||| || || || | ||| ||||||||||| ||||||| ||
Sbjct: 246 tcttgaagaggtagggttggaggagggacagagggaggaaatagtggccattattacagg 305
Query: 429 gatggggttcaaaaatgaagtttcaaataaatctattgttgagcccactcttgaatttgc 488
|||||| ||||||||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 306 gatgggattcaaaaatgaggtttcaaataagcttaatgcggagcccactcttgagtttgc 365
Query: 489 aattgtacaagatgcagatcgcctggatgcaattggggcaattggtattgcaagatgttt 548
||| || |||||||||||||| |||||||||||||| || |||||| |||||||||||||
Sbjct: 366 aatcgtgcaagatgcagatcgtctggatgcaattggtgcgattggtgttgcaagatgttt 425
Query: 549 tacatatggtggtagcaagaacagcgcattacatgatcctagaattctgccacgtgatag 608
||||||||| || ||||||||||| |||||||||||||||| | || ||||| ||||
Sbjct: 426 tacatatggagggagcaagaacagtgcattacatgatcctaacgtacttccacgggataa 485
Query: 609 cttgtcgaaggaaaagtacatgtccaaggaagagaagcagacatcaatcaatcattttca 668
||||| ||||| ||||| ||||||||||| ||||| || |||||||| |||||||| ||
Sbjct: 486 tttgtcaaaggagaagtatatgtccaaggaggagaaacaaacatcaattaatcatttcca 545
Query: 669 tgagaagctttttaaactgaaggacatgatgaagacagaggccgggaaaaggagagctga 728
||||| |||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||
Sbjct: 546 cgagaaactttttaagttgaaggacatgatgaagaccgaggctgggaaaaagagagcaga 605
Query: 729 gaaaaggcataggttcatggaggaatttgtggctgaattctacgaagagtggagtg 784
||||||||| | ||||||||| | ||||||||||||||||| ||| |||||||||
Sbjct: 606 gaaaaggcacaagttcatggaaaattttgtggctgaattctatgaacagtggagtg 661
>gb|AJ611364.1|AJ611364 AJ611364 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04684R, mRNA
sequence
Length = 691
Score = 549 bits (277), Expect = e-154
Identities = 532/617 (86%)
Strand = Plus / Plus
Query: 193 cacgacgccgcgcacgcgctccgcgtccgagaccttgcgctctcgctcgcagccgaagag 252
||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||| ||
Sbjct: 16 cacgacgccgcccacgcgctccgcgtccgggacctcgcgctctccctcgccgccgagcag 75
Query: 253 ggcctctccgctcccgaccgcctcctcaccgtggaactggccgctctcctgcacgacgtt 312
||| ||||| | |||||||||||||||| |||||||||||| ||||||||||||||| |
Sbjct: 76 ggcgtctcctcccccgaccgcctcctcatcgtggaactggctgctctcctgcacgacatc 135
Query: 313 ggagattacaagtataccaagaacaatgtggaggatatgagcgtcgttgagatgtttctt 372
|| ||||||||||| |||||| | |||||||||||||||||| | || | | |||||||
Sbjct: 136 ggtgattacaagtacaccaaggataatgtggaggatatgagcattgtcaaaaggtttctt 195
Query: 373 caagaggtaggattggatgaaggccaaaaggatgaaatagtggcaattattaaggggatg 432
|||||||||| ||||| || || || | ||| ||||||||||| ||||||| ||||||
Sbjct: 196 gaagaggtagggttggaggagggacagagggaggaaatagtggccattattacagggatg 255
Query: 433 gggttcaaaaatgaagtttcaaataaatctattgttgagcccactcttgaatttgcaatt 492
|| ||||||||||| ||||||||||| || || |||||||||||||| ||||||||
Sbjct: 256 ggattcaaaaatgaggtttcaaataagcttaatgcggagcccactcttgagtttgcaatc 315
Query: 493 gtacaagatgcagatcgcctggatgcaattggggcaattggtattgcaagatgttttaca 552
|| |||||||||||||| |||||||||||||| || |||||| |||||||||||||||||
Sbjct: 316 gtgcaagatgcagatcgtctggatgcaattggtgcgattggtgttgcaagatgttttaca 375
Query: 553 tatggtggtagcaagaacagcgcattacatgatcctagaattctgccacgtgatagcttg 612
||||| || ||||||||||| |||||||||||||||| | || ||||| |||| |||
Sbjct: 376 tatggagggagcaagaacagtgcattacatgatcctaacgtacttccacgggataatttg 435
Query: 613 tcgaaggaaaagtacatgtccaaggaagagaagcagacatcaatcaatcattttcatgag 672
|| ||||| ||||| ||||||||||| ||||| || |||||||| |||||||| || |||
Sbjct: 436 tcaaaggagaagtatatgtccaaggaggagaaacaaacatcaattaatcatttccacgag 495
Query: 673 aagctttttaaactgaaggacatgatgaagacagaggccgggaaaaggagagctgagaaa 732
|| |||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||||
Sbjct: 496 aaactttttaagttgaaggacatgatgaagaccgaggctgggaaaaagagagcagagaaa 555
Query: 733 aggcataggttcatggaggaatttgtggctgaattctacgaagagtggagtggcagggct 792
||||| | ||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct: 556 aggcacaagttcatggaaaattttgtggctgaattctatgaagagtggagtggcagggct 615
Query: 793 tgaggttgaacaaccag 809
||| ||||| |||||||
Sbjct: 616 tgaagttgaccaaccag 632
>gb|CK214852.1|CK214852 FGAS026793 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1070
Score = 535 bits (270), Expect = e-150
Identities = 558/653 (85%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 157 ctggtggagagggagatgggcgggcgcgatgcctcccacgacgccgcgcacgcgctccgc 216
||||| |||||||| ||| |||||||| | |||| ||| ||| |||| |||||| |||||
Sbjct: 858 ctggttgagagggaaatgagcgggcgcaa-gccttccaggaccccgcccacgcgntccgc 800
Query: 217 gtccgagaccttgcgctctcgctcgcagccgaagagggcctctccgctcccgaccgcctc 276
||||| ||||| |||||||| ||||| ||||| |||| ||||| | ||||||||||||
Sbjct: 799 gtccgggacctcgcgctctccctcgccgccgagcagggggtctcctcccccgaccgcctc 740
Query: 277 ctcaccgtggaactggccgctctcctgcacgacgttggagattacaagtataccaagaac 336
|||| |||||||||||| ||||||||||||||| | || ||||||||||| |||||| |
Sbjct: 739 ctcatcgtggaactggctgctctcctgcacgacatcggtgattacaagtacaccaaggat 680
Query: 337 aatgtggaggatatgagcgtcgttgagatgtttcttcaagaggtaggattggatgaaggc 396
|||||||||||||||||| | || | | ||||||| |||||||||| ||||| || ||
Sbjct: 679 aatgtggaggatatgagcattgtcaaaaggtttcttgaagaggtagggttggaggaggga 620
Query: 397 caaaaggatgaaatagtggcaattattaaggggatggggttcaaaaatgaagtttcaaat 456
|| | ||| ||||||||||| ||||||| |||||||| ||||||||||| |||||||||
Sbjct: 619 cagagggaggaaatagtggccattattacagggatgggattcaaaaatgaggtttcaaat 560
Query: 457 aaatctattgttgagcccactcttgaatttgcaattgtacaagatgcagatcgcctggat 516
|| || || |||||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 559 aagcttaatgcggagcccactcttgagtttgcaatcgtgcaagatgcagatcgtctggat 500
Query: 517 gcaattggggcaattggtattgcaagatgttttacatatggtggtagcaagaacagcgca 576
|||||||| || |||||| |||||||||||||||||||||| || ||||||||||| |||
Sbjct: 499 gcaattggtgcgattggtgttgcaagatgttttacatatggagggagcaagaacagtgca 440
Query: 577 ttacatgatcctagaattctgccacgtgatagcttgtcgaaggaaaagtacatgtccaag 636
||||||||||||| | || ||||| |||| ||||| ||||| ||||| |||||||||
Sbjct: 439 ttacatgatcctaacgtacttccacgggataatttgtcaaaggagaagtatatgtccaag 380
Query: 637 gaagagaagcagacatcaatcaatcattttcatgagaagctttttaaactgaaggacatg 696
|| ||||| || |||||||| |||||||| || ||||| |||||||| |||||||||||
Sbjct: 379 gaggagaaacaaacatcaattaatcatttccacgagaaactttttaagttgaaggacatg 320
Query: 697 atgaagacagaggccgggaaaaggagagctgagaaaaggcataggttcatggaggaattt 756
|||||||| ||||| ||||||| |||||| ||||||||||| | ||||||||| | |||
Sbjct: 319 atgaagaccgaggctgggaaaaagagagcagagaaaaggcacaagttcatggaaaatttt 260
Query: 757 gtggctgaattctacgaagagtggagtggcagggcttgaggttgaacaaccag 809
|||||||||||||| |||||||||||||||||||||||| ||||| |||||||
Sbjct: 259 gtggctgaattctatgaagagtggagtggcagggcttgaagttgaccaaccag 207
>gb|CV769654.1|CV769654 FGAS064046 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 866
Score = 500 bits (252), Expect = e-139
Identities = 555/652 (85%), Gaps = 3/652 (0%)
Strand = Plus / Plus
Query: 151 gaggagctggtggagagggagatgggcgggcgcgatgcctcccacgacgccgcgcacgcg 210
||||||||||| |||||||||||| |||||||||| ||||||||||||||||| ||||||
Sbjct: 113 gaggagctggttgagagggagatgagcgggcgcgacgcctcccacgacgccgcccacgcg 172
Query: 211 ctccgcgtccgagaccttgcgctctcgctcgcagccgaagagggcctctccgctcccgac 270
||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| | ||||||
Sbjct: 173 ctccgcgtccgggacctcgcgctctccctcgccgccgagcagggcgtctcctcccccgac 232
Query: 271 cgcctcctcaccgtggaactggccgctctcctgcacgacgttggagattacaagtatacc 330
|||||||||| |||||||||||| ||||||||||||||| | || ||||||||||| |||
Sbjct: 233 cgcctcctcatcgtggaactggctgctctcctgcacgacatcggtgattacaagtacacc 292
Query: 331 aagaacaatgtggaggatatgagcgtcgttgagatgtttcttcaagaggtaggattggat 390
||| | |||||||||||||||||| | || | | ||||||| |||||||||| |||||
Sbjct: 293 aaggataatgtggaggatatgagcattgtcaaaaggtttcttgaagaggtagggttggag 352
Query: 391 gaaggccaaaaggatgaaatagtggcaattattaaggggatggggttcaaaaatgaagtt 450
|| || || | ||| ||||||||||| ||||||| |||||||| ||||||||||| |||
Sbjct: 353 gagggacagagggaggaaatagtggccattattacagggatgggattcaaaaatgaggtt 412
Query: 451 tcaaataaatctattgttgagcccactcttgaatttgcaattgtacaagatgcagatcgc 510
|||||||| || || |||||||||||||| |||||||| || ||||||||||||||
Sbjct: 413 tcaaataagcttaatgcggagcccactcttgagtttgcaatcgtgcaagatgcagatcgt 472
Query: 511 ctggatgcaattggggcaattggtattgcaagatgttttacatatggtggtagcaagaac 570
|||||||||||||| || |||||| |||||||||||||||||||||| || |||||||||
Sbjct: 473 ctggatgcaattggtgcgattggtgttgcaagatgttttacatatggagggagcaagaac 532
Query: 571 agcgcattacatgatcctagaattctgccacgtgatagcttgtcgaaggaaaagtacatg 630
|| |||||||||||||||| | || ||||| |||| ||||| ||||| ||||| |||
Sbjct: 533 agtgcattacatgatcctaacgtacttccacgggataatttgtcaaaggagaagtatatg 592
Query: 631 t-ccaaggaagagaagcagacatcaatcaatcattttcatgagaagctttttaaactgaa 689
| ||||||| ||||| || |||||||| ||||||| || ||||| |||||| | |||
Sbjct: 593 tcccaaggaggagaaacaaacatcaatttatcatttccacgagaaacttttttagttgag 652
Query: 690 ggacatgatgaagacagaggccgggaaaaggagagctgagaaaaggcataggttcatgga 749
|||||||||| |||| ||||| ||| ||| |||||| ||||||||||| | ||||||||
Sbjct: 653 ggacatgatg-agaccgaggctggggaaaagagagcagagaaaaggcacaagttcatggg 711
Query: 750 ggaatttgtggctgaattctacgaagagtggagtggcagggcttgaggttga 801
| ||||||||||||| ||| ||| || ||||||||||||||||| |||||
Sbjct: 712 aaattttgtggctgaatcctatgaa-aggggagtggcagggcttgaagttga 762
>gb|CK210327.1|CK210327 FGAS022132 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1165
Score = 468 bits (236), Expect = e-130
Identities = 575/684 (84%), Gaps = 3/684 (0%)
Strand = Plus / Plus
Query: 128 tggcggcggcggtgcggcgagcggaggagctggtggagagggagatgggcgggcgcgatg 187
|||||||||||||||| | || ||| ||||||| |||||||||||| |||||||||| |
Sbjct: 80 tggcggcggcggtgcgctgtgctgagcagctggttgagagggagatgagcgggcgcgacg 139
Query: 188 cctcccacgacgccgcgcacgcgctccgcgtccgagaccttgcgctctcgctcgcagccg 247
|||||||||||||||| || |||||||||||||| ||||| |||||||| ||||| ||||
Sbjct: 140 cctcccacgacgccgcccatgcgctccgcgtccgggacctcgcgctctccctcgccgccg 199
Query: 248 aagagggcctctccgctcccgaccgcctcctcaccgtggaactggccgctctcctgcacg 307
| ||||| ||||| | |||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 200 agcagggcgtctcctcccccgaccgcctcctcatcgtggaactggctgctctcctgcacg 259
Query: 308 acgttggagattacaagtataccaagaacaatgtggaggatatgagcgtcgttgagatgt 367
|| | || ||||||||||| |||||| | |||||||||||| ||||| | || | | ||
Sbjct: 260 acatcggtgattacaagtacaccaaggataatgtggaggatgtgagcattgtcaaaaggt 319
Query: 368 ttcttcaagaggtaggattggatgaaggccaaaaggatgaaatagtggcaattattaagg 427
||||| ||||||| || ||||| || || | ||| ||||||||||| ||||||| |
Sbjct: 320 ttcttgaagaggtggggttggaggagggggggagggaggaaatagtggccattattacag 379
Query: 428 ggatggggttcaaaaatgaagtttcaaataaatctattgttgagcccactcttgaatttg 487
||||||| |||||||| || ||||||||||| || || |||||||||||||| ||||
Sbjct: 380 ggatgggattcaaaaacgaggtttcaaataagcttaatgcggagcccactcttgagtttg 439
Query: 488 caattgtacaagatgcagatcgcctggatgcaattggggcaattggtattgcaagatgtt 547
|||| || |||||||||||||| |||||||||||||| || |||||| |||||||||||
Sbjct: 440 caatcgtgcaagatgcagatcgtctggatgcaattggtgcgattggtgttgcaagatgtg 499
Query: 548 ttacatatggtggtagcaagaacagcgcattacatgatcctagaattctgccacgtgata 607
|||||||||| || ||||||||||| ||||| |||||||||| | || ||||| ||||
Sbjct: 500 ttacatatggagggagcaagaacagtgcattgcatgatcctaacgtacttccacgggata 559
Query: 608 gcttgtcgaaggaaaagtacatgtccaagga-agagaagcagacatcaatcaatcatttt 666
||||| |||| ||||| ||||||||||| |||||||| |||||||| ||||||||
Sbjct: 560 atttgtcagaggagaagtatatgtccaaggagggagaagcaaacatcaattaatcatttc 619
Query: 667 catgagaagctttttaaactgaaggacatgatgaagacagaggccgggaaaaggagagct 726
|||||||| ||||||| ||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 620 catgagaaactttttacgttgaaggacatgatgaagaccgaggctgggaaaaagagagca 679
Query: 727 gagaaaaggcataggttcatggaggaattt-gtggctgaattctacgaagagtggagtgg 785
||||||||||| | |||| ||| ||||||| ||||||| |||||| ||||| ||| |
Sbjct: 680 gagaaaaggcacaagttcctgg-ggaatttggtggctggattctatgaagactggcgccc 738
Query: 786 cagggcttgaggttgaacaaccag 809
|||| ||||| ||||| |||||||
Sbjct: 739 caggccttgaagttgaccaaccag 762
>gb|BE516786.1|BE516786 WHE620_G09_N18ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE620_G09_N18, mRNA sequence
Length = 465
Score = 361 bits (182), Expect = 7e-098
Identities = 384/450 (85%), Gaps = 1/450 (0%)
Strand = Plus / Plus
Query: 337 aatgtggaggatatgagcgtcgttgagatgtttcttcaagaggtaggattggatgaaggc 396
|||||||||||||||||| |||| | | ||||||| ||||||| || ||||| || ||
Sbjct: 17 aatgtggaggatatgagcatcgtcaaaa-gtttcttgaagaggtggggttggaggagggg 75
Query: 397 caaaaggatgaaatagtggcaattattaaggggatggggttcaaaaatgaagtttcaaat 456
|| | ||| ||||||||||| ||||||| |||||||| |||||||| || |||||||||
Sbjct: 76 cagagggaggaaatagtggccattattacagggatgggattcaaaaacgaggtttcaaat 135
Query: 457 aaatctattgttgagcccactcttgaatttgcaattgtacaagatgcagatcgcctggat 516
|| || || |||||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 136 aagcttaatgcggagcccactcttgagtttgcaatcgtgcaagatgcagatcgtctggat 195
Query: 517 gcaattggggcaattggtattgcaagatgttttacatatggtggtagcaagaacagcgca 576
||||| ||||| |||||| |||||||||||||||||||||| || ||||||||||| |||
Sbjct: 196 gcaatgggggcgattggtgttgcaagatgttttacatatggagggagcaagaacagtgca 255
Query: 577 ttacatgatcctagaattctgccacgtgatagcttgtcgaaggaaaagtacatgtccaag 636
|| |||||||||| | || ||||| |||| ||||| ||||| ||||| |||||||||
Sbjct: 256 ttgcatgatcctaacgtacttccacgggataatttgtcaaaggagaagtatatgtccaag 315
Query: 637 gaagagaagcagacatcaatcaatcattttcatgagaagctttttaaactgaaggacatg 696
|| |||||||| |||||||| |||||||| |||||||| |||||||| |||||||||||
Sbjct: 316 gaggagaagcaaacatcaattaatcatttccatgagaaactttttaagttgaaggacatg 375
Query: 697 atgaagacagaggccgggaaaaggagagctgagaaaaggcataggttcatggaggaattt 756
|||||||| ||||| ||||||| |||| | ||||||| ||| | |||||||||| | |||
Sbjct: 376 atgaagaccgaggctgggaaaaagagatcagagaaaatgcacaagttcatggagaatttt 435
Query: 757 gtggctgaattctacgaagagtggagtggc 786
|||||||||||||| |||||||||||||||
Sbjct: 436 gtggctgaattctatgaagagtggagtggc 465
>gb|CV781292.1|CV781292 FGAS075703 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 355 bits (179), Expect = 4e-096
Identities = 326/375 (86%)
Strand = Plus / Plus
Query: 435 gttcaaaaatgaagtttcaaataaatctattgttgagcccactcttgaatttgcaattgt 494
|||||||||||| ||||||||||| || || |||||||||||||| |||||||| ||
Sbjct: 102 gttcaaaaatgaggtttcaaataagcttaatgcggagcccactcttgagtttgcaatcgt 161
Query: 495 acaagatgcagatcgcctggatgcaattggggcaattggtattgcaagatgttttacata 554
|||||||||||||| |||||||||||||| || |||||| |||||||||||||||||||
Sbjct: 162 gcaagatgcagatcgtctggatgcaattggtgcgattggtgttgcaagatgttttacata 221
Query: 555 tggtggtagcaagaacagcgcattacatgatcctagaattctgccacgtgatagcttgtc 614
||| || ||||||||||| |||||||||||||||| | || ||||| |||| |||||
Sbjct: 222 tggagggagcaagaacagtgcattacatgatcctaacgtacttccacgggataatttgtc 281
Query: 615 gaaggaaaagtacatgtccaaggaagagaagcagacatcaatcaatcattttcatgagaa 674
||||| ||||| ||||||||||| ||||| || |||||||| |||||||| || |||||
Sbjct: 282 aaaggagaagtatatgtccaaggaggagaaacaaacatcaattaatcatttccacgagaa 341
Query: 675 gctttttaaactgaaggacatgatgaagacagaggccgggaaaaggagagctgagaaaag 734
|||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||||||
Sbjct: 342 actttttaagttgaaggacatgatgaagaccgaggctgggaaaaagagagcagagaaaag 401
Query: 735 gcataggttcatggaggaatttgtggctgaattctacgaagagtggagtggcagggcttg 794
||| | ||||||||| | ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 402 gcacaagttcatggaaaattttgtggctgaattctatgaagagtggagtggcagggcttg 461
Query: 795 aggttgaacaaccag 809
| ||||| |||||||
Sbjct: 462 aagttgaccaaccag 476
>gb|CD937712.1|CD937712 OV.107O11F010206 OV Triticum aestivum cDNA clone OV107O11, mRNA
sequence
Length = 606
Score = 349 bits (176), Expect = 3e-094
Identities = 296/336 (88%)
Strand = Plus / Plus
Query: 474 cactcttgaatttgcaattgtacaagatgcagatcgcctggatgcaattggggcaattgg 533
||||||||| |||||||| || |||||||||||||| |||||||||||||| || |||||
Sbjct: 1 cactcttgagtttgcaatcgtgcaagatgcagatcgtctggatgcaattggtgcgattgg 60
Query: 534 tattgcaagatgttttacatatggtggtagcaagaacagcgcattacatgatcctagaat 593
| |||||||||||||||||||||| || ||||||||||| ||||| |||||||||| |
Sbjct: 61 tgttgcaagatgttttacatatggagggagcaagaacagtgcattgcatgatcctaacgt 120
Query: 594 tctgccacgtgatagcttgtcgaaggaaaagtacatgtccaaggaagagaagcagacatc 653
|| ||||| |||| ||||| ||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 121 acttccacgggataatttgtcaaaggagaagtatatgtccaaggaggagaagcaaacatc 180
Query: 654 aatcaatcattttcatgagaagctttttaaactgaaggacatgatgaagacagaggccgg 713
||| |||||||| |||||||| |||||||| ||||||||||||||||||| ||||| ||
Sbjct: 181 aattaatcatttccatgagaaactttttaagttgaaggacatgatgaagaccgaggctgg 240
Query: 714 gaaaaggagagctgagaaaaggcataggttcatggaggaatttgtggctgaattctacga 773
||||| |||||| ||||||||||| | |||||||||| | ||||||||||||||||| ||
Sbjct: 241 gaaaaagagagcagagaaaaggcacaagttcatggagaattttgtggctgaattctatga 300
Query: 774 agagtggagtggcagggcttgaggttgaacaaccag 809
|||||||||||||||||||||| ||||| |||||||
Sbjct: 301 agagtggagtggcagggcttgaagttgaccaaccag 336
>gb|BE405492.1|BE405492 WHE1216_H12_P24ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1216_H12_P24, mRNA
sequence
Length = 417
Score = 339 bits (171), Expect = 2e-091
Identities = 330/383 (86%)
Strand = Plus / Plus
Query: 207 cgcgctccgcgtccgagaccttgcgctctcgctcgcagccgaagagggcctctccgctcc 266
||||||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| | ||
Sbjct: 7 cgcgctccgcgtccgggacctcgcgctctccctcgccgccgagcagggcgtctcctcccc 66
Query: 267 cgaccgcctcctcaccgtggaactggccgctctcctgcacgacgttggagattacaagta 326
|||||||||||||| |||||||||||| ||||||||||||||| | || |||||||||||
Sbjct: 67 cgaccgcctcctcatcgtggaactggctgctctcctgcacgacatcggtgattacaagta 126
Query: 327 taccaagaacaatgtggaggatatgagcgtcgttgagatgtttcttcaagaggtaggatt 386
|||||| | |||||||||||||||||| |||| | | ||||||| ||||||| || ||
Sbjct: 127 caccaaggataatgtggaggatatgagcatcgtcaaaaggtttcttgaagaggtggggtt 186
Query: 387 ggatgaaggccaaaaggatgaaatagtggcaattattaaggggatggggttcaaaaatga 446
||| || || || | ||| ||||||||||| ||||||| |||||||| |||||||| ||
Sbjct: 187 ggaggaggggcagagggaggaaatagtggccattattacagggatgggattcaaaaacga 246
Query: 447 agtttcaaataaatctattgttgagcccactcttgaatttgcaattgtacaagatgcaga 506
|||||||||||| || || |||||||||||||| |||||||| || |||||||||||
Sbjct: 247 agtttcaaataagcttaatgcagagcccactcttgagtttgcaatcgtgcaagatgcaga 306
Query: 507 tcgcctggatgcaattggggcaattggtattgcaagatgttttacatatggtggtagcaa 566
||| |||||||||||||| || |||||| |||||||||||||||||||||| || |||||
Sbjct: 307 tcgtctggatgcaattggtgcgattggtgttgcaagatgttttacatatggagggagcaa 366
Query: 567 gaacagcgcattacatgatccta 589
|||||| ||||| ||||||||||
Sbjct: 367 gaacagtgcattgcatgatccta 389
>gb|CA499466.1|CA499466 WHE4007_G10_N19ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4007_G10_N19, mRNA sequence
Length = 486
Score = 339 bits (171), Expect = 2e-091
Identities = 339/395 (85%)
Strand = Plus / Plus
Query: 129 ggcggcggcggtgcggcgagcggaggagctggtggagagggagatgggcgggcgcgatgc 188
||||||||||||||| | || ||| ||||||| |||||||||||| |||||||||| ||
Sbjct: 92 ggcggcggcggtgcgctgtgctgagcagctggttgagagggagatgagcgggcgcgacgc 151
Query: 189 ctcccacgacgccgcgcacgcgctccgcgtccgagaccttgcgctctcgctcgcagccga 248
||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 152 ctcccacgacgccgcccacgcgctccgcgtccgggacctcgcgctctccctcgccgccga 211
Query: 249 agagggcctctccgctcccgaccgcctcctcaccgtggaactggccgctctcctgcacga 308
||||| ||||| | |||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 212 gcagggcgtctcctcccccgaccgcctcctcatcgtggaactggctgctctcctgcacga 271
Query: 309 cgttggagattacaagtataccaagaacaatgtggaggatatgagcgtcgttgagatgtt 368
| | || ||||||||||| |||||| | |||||||||||||||||| |||| | | |||
Sbjct: 272 catcggtgattacaagtacaccaaggataatgtggaggatatgagcatcgtcaaaaggtt 331
Query: 369 tcttcaagaggtaggattggatgaaggccaaaaggatgaaatagtggcaattattaaggg 428
|||| ||||||| || ||||| || || || | ||| ||||||||||| ||||||| ||
Sbjct: 332 tcttgaagaggtggggttggaggaggggcagagggaggaaatagtggccattattacagg 391
Query: 429 gatggggttcaaaaatgaagtttcaaataaatctattgttgagcccactcttgaatttgc 488
|||||| |||||||| || ||||||||||| || || |||||||||||||| |||||
Sbjct: 392 gatgggattcaaaaacgaggtttcaaataagcttaatgcggagcccactcttgagtttgc 451
Query: 489 aattgtacaagatgcagatcgcctggatgcaattg 523
||| || |||||||||||||| |||||||||||||
Sbjct: 452 aatcgtgcaagatgcagatcgtctggatgcaattg 486
>gb|BG312646.1|BG312646 WHE2456_C09_E18ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2456_C09_E18,
mRNA sequence
Length = 258
Score = 268 bits (135), Expect = 8e-070
Identities = 207/231 (89%)
Strand = Plus / Plus
Query: 129 ggcggcggcggtgcggcgagcggaggagctggtggagagggagatgggcgggcgcgatgc 188
|||||||||||||||| | || ||||||||||| |||||||||||| |||||||||| ||
Sbjct: 9 ggcggcggcggtgcggtgtgctgaggagctggttgagagggagatgagcgggcgcgacgc 68
Query: 189 ctcccacgacgccgcgcacgcgctccgcgtccgagaccttgcgctctcgctcgcagccga 248
||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 69 ctcccacgacgccgcccacgcgctccgcgtccgggacctcgcgctctccctcgccgccga 128
Query: 249 agagggcctctccgctcccgaccgcctcctcaccgtggaactggccgctctcctgcacga 308
||||| ||||| | |||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 129 gcagggcgtctcctcccccgaccgcctcctcatcgtggaactggctgctctcctgcacga 188
Query: 309 cgttggagattacaagtataccaagaacaatgtggaggatatgagcgtcgt 359
||| || ||||||||||| |||||| | |||||||||||||||||| ||||
Sbjct: 189 cgtcggtgattacaagtacaccaaggataatgtggaggatatgagcatcgt 239
>gb|CV768545.1|CV768545 FGAS062936 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 867
Score = 208 bits (105), Expect = 6e-052
Identities = 180/205 (87%)
Strand = Plus / Plus
Query: 129 ggcggcggcggtgcggcgagcggaggagctggtggagagggagatgggcgggcgcgatgc 188
||||||||||| ||| | || ||||||||||| ||||| |||||| |||| ||||| ||
Sbjct: 110 ggcggcggcggcgcgatgtgctgaggagctggttgagagagagatgagcggacgcgacgc 169
Query: 189 ctcccacgacgccgcgcacgcgctccgcgtccgagaccttgcgctctcgctcgcagccga 248
||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 170 ctcccacgacgccgcgcacgcgctccgcgtccgggacctcgcgctctccctcgccgccga 229
Query: 249 agagggcctctccgctcccgaccgcctcctcaccgtggaactggccgctctcctgcacga 308
||||| ||||| | |||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 230 gcagggcgtctcctcccccgaccgcctcctcatcgtggaactggctgctctcctgcacga 289
Query: 309 cgttggagattacaagtataccaag 333
| | || ||||||||||| ||||||
Sbjct: 290 catcggtgattacaagtacaccaag 314
Score = 174 bits (88), Expect = 8e-042
Identities = 212/252 (84%), Gaps = 1/252 (0%)
Strand = Plus / Plus
Query: 337 aatgtggaggatatgagcgtcgttgagatgtttcttcaagaggtaggattggatgaaggc 396
|||||||||||||||||| |||| | | ||||||| ||||||| || ||||| || ||
Sbjct: 516 aatgtggaggatatgagcatcgtcaaaaggtttcttgaagaggtggggttggaggaggga 575
Query: 397 caaaaggatgaaatagtggcaattattaaggggatggggttcaaaaatgaagtttcaaat 456
|| | ||| ||||||||||| ||||||| |||||||| ||||||||||| ||||||||
Sbjct: 576 cagagggaggaaatagtggccattattacagggatgggattcaaaaatgaggtttcaaag 635
Query: 457 aaatctattgttgagcccactcttgaatttgcaattgtacaagatgcagatcgcctggat 516
|| || || |||||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 636 aagcttaatgcggagcccactcttgagtttgcaatcgtgcaagatgcagatcgtctggat 695
Query: 517 gcaattggggcaattggtattgcaagatgttttacatat-ggtggtagcaagaacagcgc 575
|||||||| | |||||| | |||||||||||||||||| || || ||||||||||| ||
Sbjct: 696 gcaattggtggcattggtgtcgcaagatgttttacatatgggagggagcaagaacagtgc 755
Query: 576 attacatgatcc 587
||| ||||||||
Sbjct: 756 attgcatgatcc 767
>gb|CA653873.1|CA653873 wre1n.pk192.b2 wre1n Triticum aestivum cDNA clone wre1n.pk192.b2 5'
end, mRNA sequence
Length = 506
Score = 206 bits (104), Expect = 2e-051
Identities = 176/200 (88%)
Strand = Plus / Plus
Query: 610 ttgtcgaaggaaaagtacatgtccaaggaagagaagcagacatcaatcaatcattttcat 669
||||| ||||| ||||| ||||||||||| ||||| || |||||||| |||||||| ||
Sbjct: 28 ttgtcaaaggagaagtatatgtccaaggaggagaaacaaacatcaattaatcatttccac 87
Query: 670 gagaagctttttaaactgaaggacatgatgaagacagaggccgggaaaaggagagctgag 729
||||| |||||||| ||||||||||||||||||| ||||| ||||||| |||||| |||
Sbjct: 88 gagaaactttttaagttgaaggacatgatgaagaccgaggctgggaaaaagagagcagag 147
Query: 730 aaaaggcataggttcatggaggaatttgtggctgaattctacgaagagtggagtggcagg 789
|||||||| | ||||||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct: 148 aaaaggcacaagttcatggaaaattttgtggctgaattctatgaagagtggagtggcagg 207
Query: 790 gcttgaggttgaacaaccag 809
|||||| ||||| |||||||
Sbjct: 208 gcttgaagttgaccaaccag 227
>gb|BQ170890.1|BQ170890 WHE2311_E04_J07ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2311_E04_J07, mRNA sequence
Length = 455
Score = 192 bits (97), Expect = 4e-047
Identities = 145/161 (90%)
Strand = Plus / Minus
Query: 649 acatcaatcaatcattttcatgagaagctttttaaactgaaggacatgatgaagacagag 708
|||||||| |||||||| |||||||| |||||||| ||||||||||||||||||| |||
Sbjct: 451 acatcaattaatcatttccatgagaaactttttaagttgaaggacatgatgaagaccgag 392
Query: 709 gccgggaaaaggagagctgagaaaaggcataggttcatggaggaatttgtggctgaattc 768
|| ||||||| |||||| ||||||||||| | |||||||||| | |||||||||||||||
Sbjct: 391 gctgggaaaaagagagcagagaaaaggcacaagttcatggagaattttgtggctgaattc 332
Query: 769 tacgaagagtggagtggcagggcttgaggttgaacaaccag 809
|| |||||||||||||||||||||||| ||||| |||||||
Sbjct: 331 tatgaagagtggagtggcagggcttgaagttgaccaaccag 291
>gb|BE446032.1|BE446032 WHE1148_A10_B20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1148_A10_B20,
mRNA sequence
Length = 275
Score = 190 bits (96), Expect = 1e-046
Identities = 199/232 (85%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 129 ggcggcggcggtgcggcgagcggaggagctggtggagagggagatgggcgggcgcgatgc 188
||||||||||||||| | || ||| ||||||| |||||||||||| |||||||||| ||
Sbjct: 7 ggcggcggcggtgcgctgtgctgagcagctggttgagagggagatgagcgggcgcgacgc 66
Query: 189 ctcccacgacgccgcgcacgcgctccgcgtccgagaccttgcgctctcgctcgcagccga 248
||||||||||||||| |||||||||||||||| ||||| |||||||| ||||| | |||
Sbjct: 67 ctcccacgacgccgcccacgcgctccgcgtcctggacctcgcgctctccctcgccggcga 126
Query: 249 agagggcctctccgctcccgaccgcct-cctcaccgtggaactggccgctctcctgcacg 307
||||| ||||| | ||||||||||| || |||||||||||| |||||||||||||
Sbjct: 127 gcagggcgtctcctcccccgaccgcctggctggtcgtggaactggctgctctcctgcacg 186
Query: 308 acgttggagattacaagtataccaagaacaatgtggaggatatgagcgtcgt 359
|| | || ||||||||||| |||||| | |||||||||||||||||| ||||
Sbjct: 187 acatcggtgattacaagtacaccaaggataatgtggaggatatgagcatcgt 238
>gb|CA665967.1|CA665967 wlk1.pk0023.c8 wlk1 Triticum aestivum cDNA clone wlk1.pk0023.c8 5'
end, mRNA sequence
Length = 527
Score = 157 bits (79), Expect = 2e-036
Identities = 174/202 (86%), Gaps = 3/202 (1%)
Strand = Plus / Minus
Query: 610 ttgtcgaaggaaaagtacatgtcc-aaggaagagaagcagacatcaatcaatcattttca 668
||||| ||||| ||||| |||||| ||||| ||||| || |||||| | |||||||| ||
Sbjct: 405 ttgtcaaaggagaagtatatgtcccaaggaggagaaacaaacatcatt-aatcatttcca 347
Query: 669 tgagaagctttttaaactgaaggacatgatgaagacagaggccgggaaaaggagagctga 728
||||| |||||||| ||||||||||||||||||| |||| ||||||| |||||| ||
Sbjct: 346 cgagaaactttttaagttgaaggacatgatgaagaccgaggntgggaaaaagagagcaga 287
Query: 729 gaaaaggcataggttcatggaggaatttgtggctgaattc-tacgaagagtggagtggca 787
||||||||| | ||||||||| | ||||||||||||||| || ||||||||||||||||
Sbjct: 286 gaaaaggcacaagttcatggaaaattttgtggctgaattcntatgaagagtggagtggca 227
Query: 788 gggcttgaggttgaacaaccag 809
|||||||| ||||| |||||||
Sbjct: 226 gggcttgaagttgaccaaccag 205
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 536 ttgcaagatgttttacatatgg 557
||||||||||||||||||||||
Sbjct: 475 ttgcaagatgttttacatatgg 454
>gb|BF485421.1|BF485421 WHE2311_E04_J07ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2311_E04_J07, mRNA sequence
Length = 130
Score = 131 bits (66), Expect = 1e-028
Identities = 114/130 (87%)
Strand = Plus / Plus
Query: 158 tggtggagagggagatgggcgggcgcgatgcctcccacgacgccgcgcacgcgctccgcg 217
|||| |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 1 tggttgagagggagatgagcgggcgcgacgcctcccacgacgccgcccacgcgctccgcg 60
Query: 218 tccgagaccttgcgctctcgctcgcagccgaagagggcctctccgctcccgaccgcctcc 277
|||| ||||| |||||||| ||||| ||||| ||||| ||||| | ||| ||||||||
Sbjct: 61 tccgggacctcgcgctctccctcgccgccgagcagggcgtctcctcccccttccgcctcc 120
Query: 278 tcaccgtgga 287
||| ||||||
Sbjct: 121 tcatcgtgga 130
>gb|CA638868.1|CA638868 wre1n.pk0017.d5 wre1n Triticum aestivum cDNA clone wre1n.pk0017.d5
5' end, mRNA sequence
Length = 544
Score = 131 bits (66), Expect = 1e-028
Identities = 135/154 (87%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 649 acatcaatcaatcattttcatgagaagctttttaaactgaaggacatgatgaagaca-ga 707
|||||||| |||||||| |||||||| ||||||| ||||||||||||||| ||| ||
Sbjct: 439 acatcaattaatcatttccatgagaaa-tttttaagttgaaggacatgatgaggacccga 381
Query: 708 ggccgggaaaaggagagctgagaaaaggcataggttcatggaggaatttgtggctgaatt 767
||| |||||| |||||| ||||||||||| | |||||||||| | ||||||||||||||
Sbjct: 380 ggcttggaaaaagagagcagagaaaaggcacaagttcatggag-attttgtggctgaatt 322
Query: 768 ctacgaagagtggagtggcagggcttgaggttga 801
||| |||||||||||||||||||||||| |||||
Sbjct: 321 ctatgaagagtggagtggcagggcttgaagttga 288
>gb|CA678848.1|CA678848 wlm4.pk0012.f2 wlm4 Triticum aestivum cDNA clone wlm4.pk0012.f2 5'
end, mRNA sequence
Length = 342
Score = 129 bits (65), Expect = 4e-028
Identities = 160/185 (86%), Gaps = 5/185 (2%)
Strand = Plus / Plus
Query: 129 ggcggcggcggtgcggcgagcggaggagctggtggagagggagatgggcgggcgcgatgc 188
||||||||||||||| | || ||| ||||||| |||||||||||| |||||||||| ||
Sbjct: 90 ggcggcggcggtgcgctgtgctgagcagctggttgagagggagatgagcgggcgcgacgc 149
Query: 189 ctcccacgacgccgcgcacgcgctccgcgtccgagaccttgcgctctcgct-cgcag-cc 246
||||||||||||||| ||||||||||||||||| ||||| |||||||| || ||| | ||
Sbjct: 150 ctcccacgacgccgcccacgcgctccgcgtccgggacctcgcgctctccctccgccgccc 209
Query: 247 gaagagggcctctccgctcccgaccgcctcctca-ccgtggaact-ggccgctctcctgc 304
|| ||||| ||||| | |||||||| ||||||| |||||| ||| ||| ||||||||||
Sbjct: 210 gagcagggcgtctcctcccccgaccg-ctcctcatccgtgggactgggctgctctcctgc 268
Query: 305 acgac 309
|||||
Sbjct: 269 acgac 273
>gb|BE446424.1|BE446424 WHE1457_E11_J21ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1457_E11_J21,
mRNA sequence
Length = 546
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 588 tagaattctgccacgtgatagc 609
||||||||||||||||||||||
Sbjct: 210 tagaattctgccacgtgatagc 189
>gb|BQ752632.1|BQ752632 WHE4117_D02_G03ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4117_D02_G03, mRNA sequence
Length = 742
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 127 atggcggcggcggtgcggcgag 148
||||||||||||||||||||||
Sbjct: 258 atggcggcggcggtgcggcgag 237
>gb|CA595556.1|CA595556 wpa1c.pk010.p7 wpa1c Triticum aestivum cDNA clone wpa1c.pk010.p7 5'
end, mRNA sequence
Length = 602
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 127 atggcggcggcggtgcggcgag 148
||||||||||||||||||||||
Sbjct: 100 atggcggcggcggtgcggcgag 79
>gb|CA633357.1|CA633357 wle1n.pk0069.e2 wle1n Triticum aestivum cDNA clone wle1n.pk0069.e2
5' end, mRNA sequence
Length = 615
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 127 atggcggcggcggtgcggcgag 148
||||||||||||||||||||||
Sbjct: 245 atggcggcggcggtgcggcgag 224
>gb|CA665228.1|CA665228 wlk1.pk0014.d4 wlk1 Triticum aestivum cDNA clone wlk1.pk0014.d4 5'
end, mRNA sequence
Length = 625
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 127 atggcggcggcggtgcggcgag 148
||||||||||||||||||||||
Sbjct: 256 atggcggcggcggtgcggcgag 235
>gb|CA745695.1|CA745695 wri2s.pk002.o22 wri2s Triticum aestivum cDNA clone wri2s.pk002.o22
5' end, mRNA sequence
Length = 316
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 588 tagaattctgccacgtgatagc 609
||||||||||||||||||||||
Sbjct: 145 tagaattctgccacgtgatagc 166
>gb|CA622380.1|CA622380 wl1n.pk0091.f5 wl1n Triticum aestivum cDNA clone wl1n.pk0091.f5 5'
end, mRNA sequence
Length = 583
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 467 ttgagcccactcttgaattt 486
||||||||||||||||||||
Sbjct: 267 ttgagcccactcttgaattt 248
>gb|CA696891.1|CA696891 wlk4.pk0009.f7 wlk4 Triticum aestivum cDNA clone wlk4.pk0009.f7 5'
end, mRNA sequence
Length = 398
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 127 atggcggcggcggtgcggcg 146
||||||||||||||||||||
Sbjct: 249 atggcggcggcggtgcggcg 230
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 316,255
Number of Sequences: 636343
Number of extensions: 316255
Number of successful extensions: 87902
Number of sequences better than 0.5: 27
Number of HSP's better than 0.5 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87834
Number of HSP's gapped (non-prelim): 38
length of query: 1105
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1085
effective length of database: 354,513,379
effective search space: 384647016215
effective search space used: 384647016215
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)