BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAO3g02.yg.2.1
(344 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE497128.1|BE497128 WHE0764_F02_K04ZS Wheat heat-stresse... 96 2e-018
gb|BM137882.1|BM137882 WHE0472_D08_G16ZS Wheat Fusarium gra... 96 2e-018
gb|AJ603750.1|AJ603750 AJ603750 T07 Triticum aestivum cDNA ... 96 2e-018
gb|CK208156.1|CK208156 FGAS019837 Triticum aestivum FGAS: L... 96 2e-018
gb|DR736779.1|DR736779 FGAS082149 Triticum aestivum FGAS: L... 96 2e-018
gb|AJ603649.1|AJ603649 AJ603649 T07 Triticum aestivum cDNA ... 84 7e-015
gb|BJ248187.1|BJ248187 BJ248187 Y. Ogihara unpublished cDNA... 80 1e-013
gb|BJ254326.1|BJ254326 BJ254326 Y. Ogihara unpublished cDNA... 80 1e-013
gb|CD373559.1|CD373559 WHE0418_g08_m16zT CS wheat etiolated... 80 1e-013
gb|CD866655.1|CD866655 AZO2.104A19F010112 AZO2 Triticum aes... 80 1e-013
gb|CD904575.1|CD904575 G468.001C06F010509 G468 Triticum aes... 80 1e-013
gb|CD904576.1|CD904576 G468.001C06R010928 G468 Triticum aes... 78 4e-013
gb|BJ276241.1|BJ276241 BJ276241 Y. Ogihara unpublished cDNA... 76 2e-012
gb|CV782258.1|CV782258 FGAS076671 Triticum aestivum FGAS: L... 74 7e-012
gb|BQ802999.1|BQ802999 WHE2832_E09_J18ZS Triticum monococcu... 72 3e-011
gb|CD913931.1|CD913931 G550.119N09F010712 G550 Triticum aes... 72 3e-011
gb|CD921345.1|CD921345 G608.120E18F010913 G608 Triticum aes... 66 2e-009
gb|AL830629.1|AL830629 AL830629 q:343 Triticum aestivum cDN... 64 7e-009
gb|CD908850.1|CD908850 G468.111C04F010818 G468 Triticum aes... 64 7e-009
gb|CD910229.1|CD910229 G468.114L23F010821 G468 Triticum aes... 64 7e-009
gb|CD920251.1|CD920251 G608.116G07F010911 G608 Triticum aes... 64 7e-009
gb|CK200500.1|CK200500 FGAS009015 Triticum aestivum FGAS: L... 58 4e-007
gb|BE591175.1|BE591175 WHE1655-1658_O09_O09ZS Wheat heat st... 50 1e-004
gb|CD870225.1|CD870225 AZO2.113M15F001120 AZO2 Triticum aes... 50 1e-004
gb|CV780638.1|CV780638 FGAS075049 Triticum aestivum FGAS: L... 50 1e-004
gb|CD913932.1|CD913932 G550.119N09R010920 G550 Triticum aes... 46 0.002
gb|CD882193.1|CD882193 F1.105K13F010330 F1 Triticum aestivu... 38 0.38
>gb|BE497128.1|BE497128 WHE0764_F02_K04ZS Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0764_F02_K04, mRNA
sequence
Length = 536
Score = 95.6 bits (48), Expect = 2e-018
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| ||
Sbjct: 422 aaaatggttcgcatattgtgcaatgattgcggggcagtatcagaggtgcagttccactta 481
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| ||||||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 482 attgcacacaagtgccataattgcaagtcgtacaacacccggcagatttgaagt 535
Score = 71.9 bits (36), Expect = 3e-011
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 15 gtacttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgt 74
||||||||| || |||| ||||||||| || || |||| | |||||||||||||||
Sbjct: 229 gtacttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcataccattcatga 288
Query: 75 aaagtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctccaa 131
||| ||| ||||||| ||| | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 289 aaaatgcttgaaagagatgaaggagcattgccaatttgcatgcccgctctgctccaa 345
>gb|BM137882.1|BM137882 WHE0472_D08_G16ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0472_D08_G16,
mRNA sequence
Length = 586
Score = 95.6 bits (48), Expect = 2e-018
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| ||
Sbjct: 248 aaaatggttcgcatattgtgcaatgattgcggggcagtatcagaggtgcagttccactta 307
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| ||||||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 308 attgcacacaagtgccataattgcaagtcgtacaacacccggcagatttgaagt 361
Score = 71.9 bits (36), Expect = 3e-011
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 15 gtacttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgt 74
||||||||| || |||| ||||||||| || || |||| | |||||||||||||||
Sbjct: 55 gtacttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcataccattcatga 114
Query: 75 aaagtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctccaa 131
||| ||| ||||||| ||| | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 115 aaaatgcttgaaagagatgaaggagcattgccaatttgcatgcccgctctgctccaa 171
>gb|AJ603750.1|AJ603750 AJ603750 T07 Triticum aestivum cDNA clone D10_T07_plate_17, mRNA
sequence
Length = 275
Score = 95.6 bits (48), Expect = 2e-018
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| ||
Sbjct: 98 aaaatggttcgcatattgtgcaatgattgcggggcagtatcagaggtgcagttccactta 157
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| ||||||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 158 attgcacacaagtgccataattgcaagtcgtacaacacccggcagatttgaagt 211
>gb|CK208156.1|CK208156 FGAS019837 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1117
Score = 95.6 bits (48), Expect = 2e-018
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| ||
Sbjct: 574 aaaatggttcgcatattgtgcaatgattgcggggcagtatcagaggtgcagttccactta 515
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| ||||||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 514 attgcacacaagtgccataattgcaagtcgtacaacacccggcagatttgaagt 461
Score = 67.9 bits (34), Expect = 4e-010
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 17 acttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgtaa 76
||||||| || |||| ||||||||| || || |||| | ||||||||||||||| ||
Sbjct: 765 acttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcataccattcatgaaa 706
Query: 77 agtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctccaa 131
| ||| ||||||| ||| | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 705 aatgcttgaaagagatgaaggagcattgccaatttgcatgcccgctctgctccaa 651
>gb|DR736779.1|DR736779 FGAS082149 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1091
Score = 95.6 bits (48), Expect = 2e-018
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| ||
Sbjct: 554 aaaatggttcgcatattgtgcaatgattgcggggcagtatcagaggtgcagttccactta 613
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| ||||||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 614 attgcacacaagtgccataattgcaagtcgtacaacacccggcagatttgaagt 667
Score = 71.9 bits (36), Expect = 3e-011
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 15 gtacttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgt 74
||||||||| || |||| ||||||||| || || |||| | |||||||||||||||
Sbjct: 361 gtacttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcataccattcatga 420
Query: 75 aaagtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctccaa 131
||| ||| ||||||| ||| | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 421 aaaatgcttgaaagagatgaaggagcattgccaatttgcatgcccgctctgctccaa 477
>gb|AJ603649.1|AJ603649 AJ603649 T07 Triticum aestivum cDNA clone C05_T07_plate_15, mRNA
sequence
Length = 407
Score = 83.8 bits (42), Expect = 7e-015
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| ||
Sbjct: 304 aaaatggttcgcatattgtgcaatgattgcggggcagtatcagaggtgcagttccactta 363
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccg 308
||||| ||||||||||| ||| | || |||||||||||
Sbjct: 364 attgcacacaagtgccataattgcaagtcgtacaacacccg 404
Score = 71.9 bits (36), Expect = 3e-011
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 15 gtacttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgt 74
||||||||| || |||| ||||||||| || || |||| | |||||||||||||||
Sbjct: 111 gtacttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcataccattcatga 170
Query: 75 aaagtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctccaa 131
||| ||| ||||||| ||| | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 171 aaaatgcttgaaagagatgaaggagcattgccaatttgcatgcccgctctgctccaa 227
>gb|BJ248187.1|BJ248187 BJ248187 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf5e04 5', mRNA sequence
Length = 598
Score = 79.8 bits (40), Expect = 1e-013
Identities = 94/114 (82%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| ||
Sbjct: 400 aaaatggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccactta 459
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| || |||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 460 attgcacataagtgccataattgcaagtcgtacaacacccggcagatttgaagt 513
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 251 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 310
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 311 cgctctgctccaa 323
>gb|BJ254326.1|BJ254326 BJ254326 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf5e04 3', mRNA sequence
Length = 672
Score = 79.8 bits (40), Expect = 1e-013
Identities = 94/114 (82%)
Strand = Plus / Minus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| ||
Sbjct: 514 aaaatggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccactta 455
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| || |||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 454 attgcacataagtgccataattgcaagtcgtacaacacccggcagatttgaagt 401
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 663 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 604
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 603 cgctctgctccaa 591
>gb|CD373559.1|CD373559 WHE0418_g08_m16zT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0418_g08_m16, mRNA
sequence
Length = 760
Score = 79.8 bits (40), Expect = 1e-013
Identities = 94/114 (82%)
Strand = Plus / Minus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| ||
Sbjct: 530 aaaatggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccactta 471
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| || |||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 470 attgcacataagtgccataattgcaagtcgtacaacacccggcagatttgaagt 417
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 679 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 620
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 619 cgctctgctccaa 607
>gb|CD866655.1|CD866655 AZO2.104A19F010112 AZO2 Triticum aestivum cDNA clone AZO2104A19,
mRNA sequence
Length = 598
Score = 79.8 bits (40), Expect = 1e-013
Identities = 94/114 (82%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| ||
Sbjct: 51 aaaatggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccactta 110
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| || |||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 111 attgcacataagtgccataattgcaagtcgtacaacacccggcagatttgaagt 164
>gb|CD904575.1|CD904575 G468.001C06F010509 G468 Triticum aestivum cDNA clone G468001C06,
mRNA sequence
Length = 712
Score = 79.8 bits (40), Expect = 1e-013
Identities = 94/114 (82%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| ||
Sbjct: 490 aaaatggttcgcatattgtgcaatgattgtggggcactatcagaggtgcagttccactta 549
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||| || |||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 550 attgcacataagtgccataattgcaagtcgtacaacacccggcagatttgaagt 603
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 341 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 400
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 401 cgctctgctccaa 413
>gb|CD904576.1|CD904576 G468.001C06R010928 G468 Triticum aestivum cDNA clone G468001C06,
mRNA sequence
Length = 607
Score = 77.8 bits (39), Expect = 4e-013
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 209 aaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttga 268
||||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| || |
Sbjct: 588 aaatggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccacttaa 529
Query: 269 ttgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
|||| || |||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 528 ttgcacataagtgccataattgcaagtcgtacaacacccggcagatttgaagt 476
>gb|BJ276241.1|BJ276241 BJ276241 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh25f01 3', mRNA sequence
Length = 517
Score = 75.8 bits (38), Expect = 2e-012
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 210 aatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgat 269
|||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| || ||
Sbjct: 517 aatggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccacttaat 458
Query: 270 tgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||| || |||||||| ||| | || ||||||||||| |||||||||||
Sbjct: 457 tgcacataagtgccataattgcaagtcgtacaacacccggcagatttgaagt 406
>gb|CV782258.1|CV782258 FGAS076671 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 73.8 bits (37), Expect = 7e-012
Identities = 95/115 (82%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| ||
Sbjct: 567 aaaatggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccactta 626
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacaccc-gcnagatttgaagt 321
||||| || |||||||| ||| | || |||||||||| || |||||||||||
Sbjct: 627 attgcacataagtgccataattgcaagtcgtacaacacccggccagatttgaagt 681
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 418 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 477
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 478 cgctctgctccaa 490
>gb|BQ802999.1|BQ802999 WHE2832_E09_J18ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2832_E09_J18, mRNA
sequence
Length = 799
Score = 71.9 bits (36), Expect = 3e-011
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 15 gtacttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgt 74
||||||||| || |||| ||||||||| || || |||| | ||||||| |||||||
Sbjct: 196 gtacttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcatacaattcatga 255
Query: 75 aaagtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctccaa 131
||| ||||||||||| ||| | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 256 aaaatgcctgaaagagatgaaggagcattgccaatttgcatgcccgctctgctccaa 312
Score = 54.0 bits (27), Expect = 6e-006
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 218 gcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcaca 277
||||||| ||||| || || |||||| ||||||| ||||||||||| || ||||| || |
Sbjct: 399 gcatattgtgcaatgattgtggggcagtatcagaggtgcagttccacttaattgcacata 458
Query: 278 agtgcca 284
|||||||
Sbjct: 459 agtgcca 465
>gb|CD913931.1|CD913931 G550.119N09F010712 G550 Triticum aestivum cDNA clone G550119N09,
mRNA sequence
Length = 498
Score = 71.9 bits (36), Expect = 3e-011
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 15 gtacttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgt 74
||||||||| || |||| ||||||||| || || |||| | ||||||| |||||||
Sbjct: 179 gtacttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcatacaattcatga 238
Query: 75 aaagtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctccaa 131
||| ||||||||||| ||| | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 239 aaaatgcctgaaagagatgaaggagcattgccaatttgcatgcccgctctgctccaa 295
Score = 58.0 bits (29), Expect = 4e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 212 tggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattg 271
|||| |||||||| ||||| || || |||||| ||||||| ||||||||||| || ||||
Sbjct: 376 tggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccacttaattg 435
Query: 272 cgcacaagtgcca 284
| || ||||||||
Sbjct: 436 cacataagtgcca 448
>gb|CD921345.1|CD921345 G608.120E18F010913 G608 Triticum aestivum cDNA clone G608120E18,
mRNA sequence
Length = 689
Score = 65.9 bits (33), Expect = 2e-009
Identities = 97/118 (82%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 15 gtacttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgt 74
||||||||| || |||| ||||||||| || || |||| | |||||||||||||||
Sbjct: 509 gtacttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcataccattcatga 568
Query: 75 aaagtgcctgaaagaaatggaagagcactgccagttt-gcatgccccctttgctccaa 131
||| ||| ||||||| ||| | ||||| ||||| ||| ||||||||||| ||||||||
Sbjct: 569 aaaatgcttgaaagagatgaaggagcattgccaatttggcatgccccctctgctccaa 626
>gb|AL830629.1|AL830629 AL830629 q:343 Triticum aestivum cDNA clone C01_q343_plate_9, mRNA
sequence
Length = 411
Score = 63.9 bits (32), Expect = 7e-009
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 212 tggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattg 271
|||| |||||||| ||||| || || |||||| ||||||| ||||||||||| || ||||
Sbjct: 246 tggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccacttaattg 305
Query: 272 cgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
| || |||||||| | | | || ||||||||||| |||||||||||
Sbjct: 306 cacataagtgccatagttgcaagtcgtacaacacccggcagatttgaagt 355
Score = 50.1 bits (25), Expect = 1e-004
Identities = 95/118 (80%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 15 gtacttgttcgattcgacaaatgatgtttccgtcctgccttnnngtcataccattcatgt 74
||||||||| || |||| ||||||||| || || |||| | ||||||| |||||||
Sbjct: 48 gtacttgtttgagtcgagaaatgatgtctctgttttgccatgtggtcatacaattcatga 107
Query: 75 aaagtgcctg-aaagaaatggaagagcactgccagtttgcatgccccctttgctccaa 131
||| |||||| ||||| || | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 108 aaaatgcctggaaagagattaaggagcattgccaatttgcatgcccgctctgctccaa 165
>gb|CD908850.1|CD908850 G468.111C04F010818 G468 Triticum aestivum cDNA clone G468111C04,
mRNA sequence
Length = 598
Score = 63.9 bits (32), Expect = 7e-009
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 212 tggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattg 271
|||| |||||||| ||||| || || |||||| ||||||| ||||||||||| || ||||
Sbjct: 43 tggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccacttaattg 102
Query: 272 cgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
| || |||||||| | | | || ||||||||||| |||||||||||
Sbjct: 103 cacataagtgccatagttgcaagtcgtacaacacccggcagatttgaagt 152
>gb|CD910229.1|CD910229 G468.114L23F010821 G468 Triticum aestivum cDNA clone G468114L23,
mRNA sequence
Length = 581
Score = 63.9 bits (32), Expect = 7e-009
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 212 tggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattg 271
|||| |||||||| ||||| || || |||||| ||||||| ||||||||||| || ||||
Sbjct: 16 tggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccacttaattg 75
Query: 272 cgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
| || |||||||| | | | || ||||||||||| |||||||||||
Sbjct: 76 cacataagtgccatagttgcaagtcgtacaacacccggcagatttgaagt 125
>gb|CD920251.1|CD920251 G608.116G07F010911 G608 Triticum aestivum cDNA clone G608116G07,
mRNA sequence
Length = 607
Score = 63.9 bits (32), Expect = 7e-009
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 212 tggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattg 271
|||| |||||||| ||||| || || |||||| ||||||| ||||||||||| || ||||
Sbjct: 60 tggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccacttaattg 119
Query: 272 cgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
| || |||||||| | | | || ||||||||||| |||||||||||
Sbjct: 120 cacataagtgccatagttgcaagtcgtacaacacccggcagatttgaagt 169
>gb|CK200500.1|CK200500 FGAS009015 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 795
Score = 58.0 bits (29), Expect = 4e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| ||||| || || |||||| ||||||| ||||||||||| ||
Sbjct: 383 aaaatggttcgcatattgtgcaatgattgtggggcagtatcagaggtgcagttccactta 442
Query: 268 attgc 272
|||||
Sbjct: 443 attgc 447
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 234 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 293
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 294 cgctctgctccaa 306
>gb|BE591175.1|BE591175 WHE1655-1658_O09_O09ZS Wheat heat stressed flag leaf cDNA library
Triticum aestivum cDNA clone WHE1655-1658_O09_O09, mRNA
sequence
Length = 591
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 502 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 561
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 562 cgctctgctccaa 574
>gb|CD870225.1|CD870225 AZO2.113M15F001120 AZO2 Triticum aestivum cDNA clone AZO2113M15,
mRNA sequence
Length = 691
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 450 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 509
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 510 cgctctgctccaa 522
>gb|CV780638.1|CV780638 FGAS075049 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 882
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
||||||| ||||||| ||| ||| ||| ||| ||| | ||||| ||||| ||||||||||
Sbjct: 391 gtcatacaattcatgaaaaatgcttgagagagatgaaggagcattgccaatttgcatgcc 450
Query: 119 ccctttgctccaa 131
| || ||||||||
Sbjct: 451 cgctctgctccaa 463
Score = 42.1 bits (21), Expect = 0.024
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatc-agatgtgcagttcca 263
|||||||| |||||||| ||||| || || |||||| |||| ||| |||||||||||
Sbjct: 541 aaaatggttcgcatattgtgcaatgattgtggggcagtatccagaggtgcagttcca 597
>gb|CD913932.1|CD913932 G550.119N09R010920 G550 Triticum aestivum cDNA clone G550119N09,
mRNA sequence
Length = 612
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 238 ggggcaatatcagatgtgcagttccatttgattgcgcacaagtgcca 284
|||||| ||||||| ||||||||||| || ||||| || ||||||||
Sbjct: 596 ggggcagtatcagaggtgcagttccacttaattgcacataagtgcca 550
>gb|CD882193.1|CD882193 F1.105K13F010330 F1 Triticum aestivum cDNA clone F1105K13, mRNA
sequence
Length = 479
Score = 38.2 bits (19), Expect = 0.38
Identities = 52/65 (80%)
Strand = Plus / Plus
Query: 257 agttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgcnagattt 316
||||||| || ||||| || |||||||| ||| | || ||||||||||| ||||||
Sbjct: 16 agttccacttaattgcacataagtgccataattgcaagtcgtacaacacccggcagattt 75
Query: 317 gaagt 321
|||||
Sbjct: 76 gaagt 80
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 30,554
Number of Sequences: 636343
Number of extensions: 30554
Number of successful extensions: 7985
Number of sequences better than 0.5: 27
Number of HSP's better than 0.5 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7935
Number of HSP's gapped (non-prelim): 45
length of query: 344
length of database: 367,240,239
effective HSP length: 19
effective length of query: 325
effective length of database: 355,149,722
effective search space: 115423659650
effective search space used: 115423659650
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)