BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAH2a02.xg.2.1
(644 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ241033.1|BQ241033 TaE05009H10R TaE05 Triticum aestivum... 460 e-128
gb|BJ292410.1|BJ292410 BJ292410 Y. Ogihara unpublished cDNA... 432 e-119
gb|BJ315976.1|BJ315976 BJ315976 Y. Ogihara unpublished cDNA... 319 1e-085
gb|CF133684.1|CF133684 WHE4362_A08_B16ZT Wheat meiotic flor... 174 5e-042
gb|BQ294855.1|BQ294855 WHE2855_B10_C19ZS Wheat unstressed r... 74 1e-011
gb|AL818862.1|AL818862 AL818862 l:125 Triticum aestivum cDN... 74 1e-011
gb|BQ744364.1|BQ744364 WHE4114_G02_M04ZS Wheat salt-stresse... 66 3e-009
gb|BQ803259.1|BQ803259 WHE2835_E12_J23ZS Triticum monococcu... 66 3e-009
gb|CA629496.1|CA629496 wle1n.pk0025.b1 wle1n Triticum aesti... 66 3e-009
gb|BJ210280.1|BJ210280 BJ210280 Y. Ogihara unpublished cDNA... 60 2e-007
gb|BQ484013.1|BQ484013 WHE3515_D10_H19ZS Wheat unstressed r... 58 8e-007
gb|CV522776.1|CV522776 LH-416 Triticum aestivum subtracted,... 58 8e-007
gb|BF201956.1|BF201956 WHE1759-1762_N16_N16ZS Wheat pre-ant... 56 3e-006
gb|BT009139.1| Triticum aestivum clone wl1n.pk0044.b1:fis, ... 56 3e-006
gb|BE606559.1|BE606559 WHE0903_F03_L05ZS Wheat 5-15 DAP spi... 52 5e-005
gb|BQ620630.1|BQ620630 TaLr1138D03R TaLr1 Triticum aestivum... 52 5e-005
gb|CD880265.1|CD880265 F1.001D08F001129 F1 Triticum aestivu... 52 5e-005
gb|CV522790.1|CV522790 LH-114 Triticum aestivum subtracted,... 46 0.003
gb|BJ277746.1|BJ277746 BJ277746 Y. Ogihara unpublished cDNA... 44 0.012
gb|BQ802778.1|BQ802778 WHE2829_H06_O11ZS Triticum monococcu... 44 0.012
gb|CD867447.1|CD867447 AZO2.106F05F001110 AZO2 Triticum aes... 44 0.012
gb|CD878619.1|CD878619 AZO4.103D19F010929 AZO4 Triticum aes... 44 0.012
gb|CD885791.1|CD885791 G118.100H09R010921 G118 Triticum aes... 44 0.012
gb|CD930704.1|CD930704 GR45.112C03F010418 GR45 Triticum aes... 44 0.012
gb|U48693.1|TAU48693 Triticum aestivum calmodulin TaCaM3-1 ... 44 0.012
gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis... 44 0.012
dbj|AB158407.1| Triticum aestivum CesA mRNA for putative ce... 44 0.012
gb|BE406907.1|BE406907 WHE0433_f04_k07zS Wheat etiolated se... 42 0.046
gb|BQ744450.1|BQ744450 WHE4115_G05_N09ZS Wheat salt-stresse... 42 0.046
gb|CK197218.1|CK197218 FGAS005689 Triticum aestivum FGAS: L... 40 0.18
>gb|BQ241033.1|BQ241033 TaE05009H10R TaE05 Triticum aestivum cDNA clone TaE05009H10R, mRNA
sequence
Length = 595
Score = 460 bits (232), Expect = e-128
Identities = 382/432 (88%)
Strand = Plus / Plus
Query: 2 ctcagcccatacaggcttctcattcttatccgcatggccgtccttggtctgttccttaca 61
|||||||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||
Sbjct: 164 ctcagcccatacaggcttcttgttctcatccgcttggccgttcttggtctgttccttaca 223
Query: 62 tggagaattaagcacaagaatgaggatgccatttggctctggggcatgtctgttgtctgc 121
|||||||||||||| |||||||| ||||| || ||||| ||||||||||||||||| ||
Sbjct: 224 tggagaattaagcataagaatgaagatgcaatgtggctatggggcatgtctgttgtttgt 283
Query: 122 gaactctggtttggtttttcatggctgctcgaccagctgccaaagctgtgccctgtgaac 181
|||||||||||||| ||||| ||| | | |||||||||||||||||||||||||| |||
Sbjct: 284 gaactctggtttggcttttcttggatcttggaccagctgccaaagctgtgccctgttaac 343
Query: 182 cgggccactgaccttgccgtcctgaaagacaagtttgagaccccaacaccgtccaaccct 241
|| || ||||||||||| ||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 344 cgagcaactgaccttgctgtcctgaaagacaagtttgagaccccaacgccgtcaaatccg 403
Query: 242 actggacggtcggatttaccagggcttgatatatttgtatctactgctgatccggagaaa 301
| |||| | || ||| | || ||||||||||||| ||| || ||||||||||| ||||||
Sbjct: 404 aatggaagatctgatctgccggggcttgatatatatgtgtccactgctgatccagagaaa 463
Query: 302 gaacctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtg 361
||||||||| | ||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 464 gaacctccattaactacagcaaacaccattctgtccatccttgctgctgactatcctgtt 523
Query: 362 gagaagctttcttgctatgtttctgatgatggaggggctctcctgacttttgaagccatg 421
||||||||||||||||||||||||||||| ||||| |||||||| || |||||||| |||
Sbjct: 524 gagaagctttcttgctatgtttctgatgacggaggcgctctccttacatttgaagcaatg 583
Query: 422 gctgaagctgct 433
||||||||||||
Sbjct: 584 gctgaagctgct 595
>gb|BJ292410.1|BJ292410 BJ292410 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl27j14 5', mRNA sequence
Length = 507
Score = 432 bits (218), Expect = e-119
Identities = 380/434 (87%)
Strand = Plus / Plus
Query: 2 ctcagcccatacaggcttctcattcttatccgcatggccgtccttggtctgttccttaca 61
|||||||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||
Sbjct: 74 ctcagcccatacaggcttcttgttctcatccgcttggccgttcttggtctgttccttaca 133
Query: 62 tggagaattaagcacaagaatgaggatgccatttggctctggggcatgtctgttgtctgc 121
|||||||||||||| |||||||| ||||| || ||||| ||||||||||||||||| ||
Sbjct: 134 tggagaattaagcataagaatgaagatgcaatgtggctgtggggcatgtctgttgtttgt 193
Query: 122 gaactctggtttggtttttcatggctgctcgaccagctgccaaagctgtgccctgtgaac 181
|||||||||||||| ||||| ||| | | |||||||||||||||||||||||||| |||
Sbjct: 194 gaactctggtttggcttttcttggatcttggaccagctgccaaagctgtgccctgttaac 253
Query: 182 cgggccactgaccttgccgtcctgaaagacaagtttgagaccccaacaccgtccaaccct 241
|| || || |||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 254 cgagcaacggaccttgctgtcctgaaagacaagtttgagaccccaacaccgtcaaatcct 313
Query: 242 actggacggtcggatttaccagggcttgatatatttgtatctactgctgatccggagaaa 301
| ||| | || ||| | || ||||||||||||| ||| || ||||||||||| ||||||
Sbjct: 314 aacggaagatctgatctgccggggcttgatatatatgtgtccactgctgatccagagaaa 373
Query: 302 gaacctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtg 361
||||| ||| | ||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 374 gaacccccattaactacagcaaacaccattctgtccatccttgctgctgactatcctgtt 433
Query: 362 gagaagctttcttgctatgtttctgatgatggaggggctctcctgacttttgaagccatg 421
||||||||||| ||||| ||||||||||| ||||| || ||||| || ||||||||||||
Sbjct: 434 gagaagctttcctgctacgtttctgatgacggaggcgccctccttacatttgaagccatg 493
Query: 422 gctgaagctgctag 435
|||||||| |||||
Sbjct: 494 gctgaagccgctag 507
>gb|BJ315976.1|BJ315976 BJ315976 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf20p24 5', mRNA sequence
Length = 661
Score = 319 bits (161), Expect = 1e-085
Identities = 251/281 (89%)
Strand = Plus / Plus
Query: 362 gagaagctttcttgctatgtttctgatgatggaggggctctcctgacttttgaagccatg 421
||||||||||||||||||||||||||||| ||||| |||||||| || || ||||| |||
Sbjct: 3 gagaagctttcttgctatgtttctgatgacggaggcgctctccttacattcgaagcaatg 62
Query: 422 gctgaagctgctagctttgctaatatgtgggttcctttctgtcgcaagcacaacattgag 481
|||||||||||||||||||| || |||||||||||||| |||||||||||| ||| |||
Sbjct: 63 gctgaagctgctagctttgccaacatgtgggttcctttttgtcgcaagcacggcatcgag 122
Query: 482 cctcgcaatcctgacagctacttcaatcttaagaaggacccatacaagaacaaggttcgc 541
|||||||||||||| |||||||||| ||| |||| |||||| |||||||||||||| |||
Sbjct: 123 cctcgcaatcctgagagctacttcagtctgaagagggacccttacaagaacaaggtacgc 182
Query: 542 caggattttgtcaaggacaggaggagggtcaagagggagtatgacgagttcaaggtcagg 601
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 183 tcagattttgtcaaggacaggaggaggatcaagagggagtatgatgagttcaaggtcagg 242
Query: 602 atcaatggtctgcctgactcgatacgccgacgctctgatgc 642
|||||||| |||||||||| || || || ||||| |||||
Sbjct: 243 atcaatgggttgcctgactctattcgtcgccgctccgatgc 283
>gb|CF133684.1|CF133684 WHE4362_A08_B16ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4362_A08_B16, mRNA sequence
Length = 756
Score = 174 bits (88), Expect = 5e-042
Identities = 145/164 (88%)
Strand = Plus / Plus
Query: 479 gagcctcgcaatcctgacagctacttcaatcttaagaaggacccatacaagaacaaggtt 538
||||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||||
Sbjct: 13 gagcctcgcaatcctgagagctacttcagtctaaagagggacccttacaagaacaaggta 72
Query: 539 cgccaggattttgtcaaggacaggaggagggtcaagagggagtatgacgagttcaaggtc 598
||| ||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||
Sbjct: 73 cgctcggactttgtcaaggacaggagaaggatcaagagggagtatgatgagttcaaggtc 132
Query: 599 aggatcaatggtctgcctgactcgatacgccgacgctctgatgc 642
|| |||||||| ||||||||||| || || || ||||| |||||
Sbjct: 133 agaatcaatgggctgcctgactcaatccgtcgccgctccgatgc 176
>gb|BQ294855.1|BQ294855 WHE2855_B10_C19ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2855_B10_C19, mRNA sequence
Length = 731
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 545 cctccgctggtcacagcaaacactatcctatctatcctggcggtagattatccggttgac 604
Query: 365 aagctttcttgctatgtttctgatgatgg 393
|||||||||||||||||||||||||||||
Sbjct: 605 aagctttcttgctatgtttctgatgatgg 633
>gb|AL818862.1|AL818862 AL818862 l:125 Triticum aestivum cDNA clone B12_l125_plate_4, mRNA
sequence
Length = 357
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 12 cctccgctggtcacagcaaacactatcctatctatcctggcggtagattatccggttgac 71
Query: 365 aagctttcttgctatgtttctgatgatgg 393
|||||||||||||||||||||||||||||
Sbjct: 72 aagctttcttgctatgtttctgatgatgg 100
>gb|BQ744364.1|BQ744364 WHE4114_G02_M04ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4114_G02_M04, mRNA sequence
Length = 657
Score = 65.9 bits (33), Expect = 3e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 254 cctccgctggtcacagcaaacactatcctatctatcctggcggtagattatccggttgac 313
Query: 365 aagctttcttgctatgtttctgatgatgg 393
||||| |||||||||||||||||||||||
Sbjct: 314 aagctctcttgctatgtttctgatgatgg 342
>gb|BQ803259.1|BQ803259 WHE2835_E12_J23ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2835_E12_J23, mRNA
sequence
Length = 701
Score = 65.9 bits (33), Expect = 3e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 381 cctccgctggtcacagcaaacactatcctatctatcctggcggtagattatccggttgac 440
Query: 365 aagctttcttgctatgtttctgatgatgg 393
||||| |||||||||||||||||||||||
Sbjct: 441 aagctctcttgctatgtttctgatgatgg 469
>gb|CA629496.1|CA629496 wle1n.pk0025.b1 wle1n Triticum aestivum cDNA clone wle1n.pk0025.b1
5' end, mRNA sequence
Length = 533
Score = 65.9 bits (33), Expect = 3e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 307 cctccgctggtcacagcaaacactatcctatctatcctggcggtagattatccggttgac 248
Query: 365 aagctttcttgctatgtttctgatgatgg 393
||||| |||||||||||||||||||||||
Sbjct: 247 aagctctcttgctatgtttctgatgatgg 219
>gb|BJ210280.1|BJ210280 BJ210280 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh27c19 5', mRNA sequence
Length = 386
Score = 60.0 bits (30), Expect = 2e-007
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 295 cctccgctggtcacagcaaacactatcctatctatcctggcggnagattatccggttgac 354
Query: 365 aagctttcttgctatgtttctgatgatgg 393
||||| |||||||| ||||||||||||||
Sbjct: 355 aagctctcttgctacgtttctgatgatgg 383
>gb|BQ484013.1|BQ484013 WHE3515_D10_H19ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3515_D10_H19, mRNA sequence
Length = 755
Score = 58.0 bits (29), Expect = 8e-007
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 571 cctccgctggtcacagcaaacactatcctatctatcctggcggtagattatccggttgac 630
Query: 365 aagctttcttgctatgtttctgatgatgg 393
||||| |||||||| ||||||||||||||
Sbjct: 631 aagctctcttgctacgtttctgatgatgg 659
>gb|CV522776.1|CV522776 LH-416 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 212
Score = 58.0 bits (29), Expect = 8e-007
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 193 cctccgctggtcacagcaaacactatcctatctatcctggcggtagattatccggttgac 134
Query: 365 aagctttcttgctatgtttctgatgatgg 393
||||| |||||||| ||||||||||||||
Sbjct: 133 aagctctcttgctacgtttctgatgatgg 105
>gb|BF201956.1|BF201956 WHE1759-1762_N16_N16ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE1759-1762_N16_N16, mRNA
sequence
Length = 367
Score = 56.0 bits (28), Expect = 3e-006
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 298 gaaagaacctccactggtcacagcaaacactattctgtccatccttgctgctgactaccc 357
|||||||||| | ||| ||||| |||| ||| | |||||||| ||||||| || |||||
Sbjct: 181 gaaagaacctgcgctgatcacatcaaatactgtcctgtccattcttgctgtggattaccc 240
Query: 358 tgtggagaagctttcttgctatgtttctgatgatgg 393
||| || || | || ||||||||||||||||||||
Sbjct: 241 tgtcgacaaagtgtcatgctatgtttctgatgatgg 276
>gb|BT009139.1| Triticum aestivum clone wl1n.pk0044.b1:fis, full insert mRNA
sequence
Length = 1157
Score = 56.0 bits (28), Expect = 3e-006
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 302 gaacctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtg 361
|||||||| |||||||||| |||||| | || ||||||||| ||| || || || ||
Sbjct: 650 gaacctcccttggtcacagcgaacactgtcctttccatcctttctgtggattatccggtt 709
Query: 362 gagaagctttcttgctatgtttctgatgatgg 393
|||||| | || ||||||||||||||||||||
Sbjct: 710 gagaaggtctcctgctatgtttctgatgatgg 741
>gb|BE606559.1|BE606559 WHE0903_F03_L05ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0903_F03_L05, mRNA sequence
Length = 558
Score = 52.0 bits (26), Expect = 5e-005
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 338 atccttgctgctgactaccctgtggagaagctttcttgctatgtttctgatgatggag 395
|||||||||| ||||||||||| || || | ||||||||||| |||||||||||||
Sbjct: 12 atccttgctgtggactaccctgttgacaaagtatcttgctatgtatctgatgatggag 69
>gb|BQ620630.1|BQ620630 TaLr1138D03R TaLr1 Triticum aestivum cDNA clone TaLr1138D03R, mRNA
sequence
Length = 712
Score = 52.0 bits (26), Expect = 5e-005
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 314 gtcacagcaaacactattctgtccatccttgctgctgactaccctgtggagaagctttct 373
||||| || |||||| | || ||||| ||||||| ||| || |||||||| ||| | |||
Sbjct: 77 gtcactgccaacactgtgctatccatacttgctgttgattatcctgtggacaaggtctct 136
Query: 374 tgctatgtttctgatgatggag 395
|||||||| |||||||| ||||
Sbjct: 137 tgctatgtatctgatgacggag 158
>gb|CD880265.1|CD880265 F1.001D08F001129 F1 Triticum aestivum cDNA clone F1001D08, mRNA
sequence
Length = 694
Score = 52.0 bits (26), Expect = 5e-005
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 314 gtcacagcaaacactattctgtccatccttgctgctgactaccctgtggagaagctttct 373
||||| || |||||| | || ||||| ||||||| ||| || |||||||| ||| | |||
Sbjct: 187 gtcactgccaacactgtgctatccatacttgctgttgattatcctgtggacaaggtctct 246
Query: 374 tgctatgtttctgatgatggag 395
|||||||| |||||||| ||||
Sbjct: 247 tgctatgtatctgatgacggag 268
>gb|CV522790.1|CV522790 LH-114 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 354
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 305 cctccactggtcacagcaaacactattctgtccatccttgctgctgactaccctgtggag 364
||||| |||||||||||||||||||| || || ||||| || | || || || || ||
Sbjct: 329 cctccgctggtcacagcaaacactatcctatctatcctggcggtagattatccggttgac 270
Query: 365 aagctttcttgctatgttt 383
||||| |||||||||||||
Sbjct: 269 aagctctcttgctatgttt 251
>gb|BJ277746.1|BJ277746 BJ277746 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr12n18 5', mRNA sequence
Length = 661
Score = 44.1 bits (22), Expect = 0.012
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 314 gtcacagcaaacactattctgtccatccttgctgctgactaccctgtggagaagctttct 373
||||| || |||||| | || ||||| ||||||| ||| || || ||||| ||| | |||
Sbjct: 53 gtcactgccaacactgtgctatccattcttgctgttgattatcccgtggacaaggtctct 112
Query: 374 tgctatgtttctgatgatggag 395
|||||||| |||||||| ||||
Sbjct: 113 tgctatgtatctgatgacggag 134
>gb|BQ802778.1|BQ802778 WHE2829_H06_O11ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2829_H06_O11, mRNA
sequence
Length = 762
Score = 44.1 bits (22), Expect = 0.012
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 314 gtcacagcaaacactattctgtccatccttgctgctgactaccctgtggagaagctttct 373
||||| || |||||| | || ||||| ||||||| ||| || || ||||| ||| | |||
Sbjct: 556 gtcactgccaacactgtgctatccattcttgctgttgattatcccgtggacaaggtctct 615
Query: 374 tgctatgtttctgatgatggag 395
|||||||| |||||||| ||||
Sbjct: 616 tgctatgtatctgatgacggag 637
>gb|CD867447.1|CD867447 AZO2.106F05F001110 AZO2 Triticum aestivum cDNA clone AZO2106F05,
mRNA sequence
Length = 687
Score = 44.1 bits (22), Expect = 0.012
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 577 ggagtatgacgagttcaaggtcaggatcaa 606
|||||| ||||||||||||| |||||||||
Sbjct: 156 ggagtacgacgagttcaaggccaggatcaa 185
>gb|CD878619.1|CD878619 AZO4.103D19F010929 AZO4 Triticum aestivum cDNA clone AZO4103D19,
mRNA sequence
Length = 680
Score = 44.1 bits (22), Expect = 0.012
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 314 gtcacagcaaacactattctgtccatccttgctgctgactaccctgtggagaagctttct 373
||||| || |||||| | || ||||| ||||||| ||| || || ||||| ||| | |||
Sbjct: 465 gtcactgccaacactgtgctatccattcttgctgttgattatcccgtggacaaggtctct 524
Query: 374 tgctatgtttctgatgatggag 395
|||||||| |||||||| ||||
Sbjct: 525 tgctatgtatctgatgacggag 546
>gb|CD885791.1|CD885791 G118.100H09R010921 G118 Triticum aestivum cDNA clone G118100H09,
mRNA sequence
Length = 742
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 305 cctccactggtcacagcaaacactat 330
||||| ||||||||||||||||||||
Sbjct: 665 cctccgctggtcacagcaaacactat 690
>gb|CD930704.1|CD930704 GR45.112C03F010418 GR45 Triticum aestivum cDNA clone GR45112C03,
mRNA sequence
Length = 643
Score = 44.1 bits (22), Expect = 0.012
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 577 ggagtatgacgagttcaaggtcaggatcaa 606
|||||| ||||||||||||| |||||||||
Sbjct: 333 ggagtacgacgagttcaaggccaggatcaa 362
>gb|U48693.1|TAU48693 Triticum aestivum calmodulin TaCaM3-1 mRNA, complete cds
Length = 1529
Score = 44.1 bits (22), Expect = 0.012
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 314 gtcacagcaaacactattctgtccatccttgctgctgactaccctgtggagaagctttct 373
||||| || |||||| | || ||||| ||||||| ||| || || ||||| ||| | |||
Sbjct: 233 gtcactgccaacactgtgctatccattcttgctgttgattatcccgtggacaaggtctct 174
Query: 374 tgctatgtttctgatgatggag 395
|||||||| |||||||| ||||
Sbjct: 173 tgctatgtatctgatgacggag 152
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA
sequence
Length = 3626
Score = 44.1 bits (22), Expect = 0.012
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 314 gtcacagcaaacactattctgtccatccttgctgctgactaccctgtggagaagctttct 373
||||| || |||||| | || ||||| ||||||| ||| || || ||||| ||| | |||
Sbjct: 1170 gtcactgccaacactgtgctatccattcttgctgttgattatcccgtggacaaggtctct 1229
Query: 374 tgctatgtttctgatgatggag 395
|||||||| |||||||| ||||
Sbjct: 1230 tgctatgtatctgatgacggag 1251
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete
cds
Length = 3681
Score = 44.1 bits (22), Expect = 0.012
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 314 gtcacagcaaacactattctgtccatccttgctgctgactaccctgtggagaagctttct 373
||||| || |||||| | || ||||| ||||||| ||| || || ||||| ||| | |||
Sbjct: 1196 gtcactgccaacactgtgctatccattcttgctgttgattatcccgtggacaaggtctct 1255
Query: 374 tgctatgtttctgatgatggag 395
|||||||| |||||||| ||||
Sbjct: 1256 tgctatgtatctgatgacggag 1277
>gb|BE406907.1|BE406907 WHE0433_f04_k07zS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0433_f04_k07, mRNA
sequence
Length = 383
Score = 42.1 bits (21), Expect = 0.046
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 335 tccatccttgctgctgactaccctgtggagaagctttcttgctatgtttctgatgatgga 394
||||| ||||||| ||| || || ||||| ||| | ||||||||||| |||||||| |||
Sbjct: 12 tccattcttgctgttgattatcccgtggacaaggtctcttgctatgtatctgatgacgga 71
Query: 395 g 395
|
Sbjct: 72 g 72
>gb|BQ744450.1|BQ744450 WHE4115_G05_N09ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4115_G05_N09, mRNA sequence
Length = 681
Score = 42.1 bits (21), Expect = 0.046
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 291 atccggagaaagaacctccac 311
|||||||||||||||||||||
Sbjct: 463 atccggagaaagaacctccac 483
>gb|CK197218.1|CK197218 FGAS005689 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 816
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 292 tccggagaaagaacctccac 311
||||||||||||||||||||
Sbjct: 155 tccggagaaagaacctccac 174
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 136,519
Number of Sequences: 636343
Number of extensions: 136519
Number of successful extensions: 35173
Number of sequences better than 0.5: 30
Number of HSP's better than 0.5 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35104
Number of HSP's gapped (non-prelim): 56
length of query: 644
length of database: 367,240,239
effective HSP length: 19
effective length of query: 625
effective length of database: 355,149,722
effective search space: 221968576250
effective search space used: 221968576250
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)