BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF36h01.yg.2.1
(689 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY091512.1| Triticum aestivum endo-1,4-beta-glucanase mR... 553 e-156
gb|BJ302532.1|BJ302532 BJ302532 Y. Ogihara unpublished cDNA... 533 e-150
gb|BE498699.1|BE498699 WHE0965_H06_P11ZS Wheat pre-anthesis... 470 e-131
gb|CV770686.1|CV770686 FGAS065079 Triticum aestivum FGAS: L... 456 e-127
gb|CA621982.1|CA621982 wl1n.pk0080.g3 wl1n Triticum aestivu... 448 e-124
gb|CA486797.1|CA486797 WHE4336_A10_B20ZS Wheat meiotic anth... 438 e-121
gb|CA603638.1|CA603638 wr1.pk0029.h4 wr1 Triticum aestivum ... 414 e-114
gb|CA729226.1|CA729226 wdi1c.pk006.i8 wdi1c Triticum aestiv... 398 e-109
gb|CV766105.1|CV766105 FGAS060492 Triticum aestivum FGAS: L... 373 e-101
gb|CK154571.1|CK154571 FGAS033273 Triticum aestivum FGAS: T... 367 e-100
gb|CA639221.1|CA639221 wre1n.pk0022.d10 wre1n Triticum aest... 353 1e-095
gb|BM138422.1|BM138422 WHE0497_E04_J07ZS Wheat Fusarium gra... 349 2e-094
gb|CA654330.1|CA654330 wre1n.pk164.d9 wre1n Triticum aestiv... 347 6e-094
gb|CA646342.1|CA646342 wre1n.pk0104.c12 wre1n Triticum aest... 325 2e-087
gb|BQ838634.1|BQ838634 WHE2912_H07_P14ZS Wheat aluminum-str... 309 1e-082
gb|CA710168.1|CA710168 wdk2c.pk015.n24 wdk2c Triticum aesti... 305 2e-081
gb|CA732801.1|CA732801 wlp1c.pk004.j5 wlp1c Triticum aestiv... 291 3e-077
gb|BE493065.1|BE493065 WHE0560_B01_C02ZE Triticum monococcu... 281 3e-074
gb|CA715946.1|CA715946 wdk3c.pk016.b10 wdk3c Triticum aesti... 280 1e-073
gb|BJ256315.1|BJ256315 BJ256315 Y. Ogihara unpublished cDNA... 256 2e-066
gb|BJ256097.1|BJ256097 BJ256097 Y. Ogihara unpublished cDNA... 226 2e-057
gb|BE496969.1|BE496969 WHE0762_B06_D12ZS Wheat heat-stresse... 190 9e-047
gb|BQ483825.1|BQ483825 WHE3513_A10_A19ZS Wheat unstressed r... 172 2e-041
gb|CD887428.1|CD887428 G118.105C24F010605 G118 Triticum aes... 172 2e-041
gb|AL817980.1|AL817980 AL817980 j:223 Triticum aestivum cDN... 157 1e-036
gb|BJ309500.1|BJ309500 BJ309500 Y. Ogihara unpublished cDNA... 92 6e-017
gb|BQ838506.1|BQ838506 WHE2911_C09_F17ZS Wheat aluminum-str... 88 9e-016
gb|CA731948.1|CA731948 wlp1c.pk002.h11 wlp1c Triticum aesti... 88 9e-016
gb|CD891166.1|CD891166 G118.116G13F010723 G118 Triticum aes... 88 9e-016
gb|CD930195.1|CD930195 GR45.110I16F010418 GR45 Triticum aes... 88 9e-016
gb|CD939288.1|CD939288 OV.113B03F010313 OV Triticum aestivu... 88 9e-016
gb|CV522413.1|CV522413 RH-1166 Triticum aestivum subtracted... 88 9e-016
gb|AJ611772.1|AJ611772 AJ611772 Triticum turgidum subsp. du... 74 1e-011
gb|BQ788847.1|BQ788847 WHE4154_E06_J12ZS Wheat CS whole pla... 70 2e-010
gb|CK197099.1|CK197099 FGAS005570 Triticum aestivum FGAS: L... 56 3e-006
gb|BI751095.1|BI751095 Ta01_04a02_R Ta01_AAFC_ECORC_Fusariu... 54 1e-005
gb|CD869247.1|CD869247 AZO2.111C04F001115 AZO2 Triticum aes... 42 0.050
gb|CV776138.1|CV776138 FGAS070542 Triticum aestivum FGAS: L... 40 0.20
>gb|AY091512.1| Triticum aestivum endo-1,4-beta-glucanase mRNA, complete cds
Length = 2196
Score = 553 bits (279), Expect = e-156
Identities = 465/527 (88%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| |||||||||| |||||||||| ||||||||||
Sbjct: 1361 aaagaggcaaggaaagctgcattgacgacgtactgaagtggttgaggccctccatggttg 1302
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 1301 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 1242
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 1241 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 1182
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1181 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 1122
Query: 282 gtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattccc 341
||||||||||| |||||||| || |||| |||| | || || || ||||| ||||| ||
Sbjct: 1121 gtaaacactccatagtttgggctgccaatccagaacgcgcctgcatgctttgccatccct 1062
Query: 342 ggggctgtggcgacggtgaggtacgagttgttccccgtggcgaagtacatccacgcaccg 401
|| |||||||||| || |||||||| |||| ||||||||||||||||||||||||||
Sbjct: 1061 ggagctgtggcgatcgtcaggtacgatgtgtttcccgtggcgaagtacatccacgcacca 1002
Query: 402 ccccacacgaactcgtcccagtagctggtggagttgtagaagatggcctggtcagatccg 461
|||||||| ||||| ||||||||||||||||| ||| |||| | | ||| ||||| ||
Sbjct: 1001 ccccacacaaactcatcccagtagctggtggaattgcagaacagcgactgatcagagcca 942
Query: 462 ttggggctgtatcgcccacgctgcagcctgccgaacttgtacagggccttggcgcccttg 521
|||||||||||||| || ||||||||||| |||||||||||||| |||||||| || | |
Sbjct: 941 ttggggctgtatcggccgcgctgcagcctaccgaacttgtacagcgccttggcaccatgg 882
Query: 522 acgagcttgtcggagtaggtcttgctgtccttgaacactatggaagc 568
||||||||||| ||||| | |||||||||||||||||||||||||||
Sbjct: 881 acgagcttgtcagagtacgccttgctgtccttgaacactatggaagc 835
>gb|BJ302532.1|BJ302532 BJ302532 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd15l02 5', mRNA sequence
Length = 627
Score = 533 bits (269), Expect = e-150
Identities = 419/469 (89%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 469 aaagaggcaaggaaagctgcattgacgacgtactgaagcggttgaggccctccatggttg 410
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 409 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 350
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 349 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 290
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 289 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 230
Query: 282 gtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattccc 341
||||||||||| |||||||| || |||| |||| | || || |||||||| ||||||||
Sbjct: 229 gtaaacactccatagtttgggctaccaatccagaacgcgcctgcgtgctttgccattcct 170
Query: 342 ggggctgtggcgacggtgaggtacgagttgttccccgtggcgaagtacatccacgcaccg 401
|| |||||||||| ||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 169 ggagctgtggcgatggtgaggtatgatgtgttccccgtggcgaagtacatccacgcacca 110
Query: 402 ccccacacgaactcgtcccagtagctggtggagttgtagaagatggcctggtcagatccg 461
|||||||| ||||| ||||||||||||||||| |||||||| | | ||| ||||| ||
Sbjct: 109 ccccacacaaactcatcccagtagctggtggaattgtagaacaatgactgatcagagcca 50
Query: 462 ttggggctgtatcgcccacgctgcagcctgccgaacttgtacagggcct 510
|||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 49 ttggggctgtatcgaccgcgctgcagcctaccgaacttgtacagcgcct 1
>gb|BE498699.1|BE498699 WHE0965_H06_P11ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0965_H06_P11, mRNA sequence
Length = 481
Score = 470 bits (237), Expect = e-131
Identities = 360/401 (89%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||| ||||| ||||| |||||||||| |||||||||| ||||||||||
Sbjct: 406 aaagaggcaaggaatgctgcattgacgacgtactgaagtggttgaggccctccatggttg 347
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 346 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaataggagcac 287
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 286 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 227
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||| || || |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 226 cttagcaacagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 167
Query: 282 gtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattccc 341
||||||||||| |||||||| || |||| |||| | ||||| |||||||||||||| ||
Sbjct: 166 gtaaacactccatagtttgggctaccaatccagaacgctcccgcgtgcttcgccatccct 107
Query: 342 ggggctgtggcgacggtgaggtacgagttgttccccgtggcgaagtacatccacgcaccg 401
|| |||||||||| ||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 106 ggagctgtggcgatggtgaggtatgatgtgttccccgtggcgaagtacatccacgcaccg 47
Query: 402 ccccacacgaactcgtcccagtagctggtggagttgtagaa 442
|||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 46 ccccacacaaactcatcccagtagctggtggaattgtagaa 6
>gb|CV770686.1|CV770686 FGAS065079 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 871
Score = 456 bits (230), Expect = e-127
Identities = 344/382 (90%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 488 aaagaggcaaggaaagctgcattgacgacgtactgaagcggttgaggccctccatggttg 429
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 428 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 369
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 368 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 309
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 308 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 249
Query: 282 gtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattccc 341
||||||||||| |||||||| || |||| |||| | || || |||||||| ||||||||
Sbjct: 248 gtaaacactccatagtttgggctaccaatccagaacgcgcctgcgtgctttgccattcct 189
Query: 342 ggggctgtggcgacggtgaggtacgagttgttccccgtggcgaagtacatccacgcaccg 401
|| |||||||||| ||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 188 ggagctgtggcgatggtgaggtatgatgtgttccccgtggcgaagtacatccacgcacca 129
Query: 402 ccccacacgaactcgtcccagt 423
|||||||| ||||| |||||||
Sbjct: 128 ccccacacaaactcatcccagt 107
>gb|CA621982.1|CA621982 wl1n.pk0080.g3 wl1n Triticum aestivum cDNA clone wl1n.pk0080.g3 5'
end, mRNA sequence
Length = 338
Score = 448 bits (226), Expect = e-124
Identities = 293/316 (92%)
Strand = Plus / Minus
Query: 92 tccatggttgagctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaa 151
||| ||| |||| ||||||| ||||||||| |||||||||||||||||||||| ||| |
Sbjct: 316 tccntgggtgagntgtattagtcctcctttagtgaagttgaatgaattgaatagaggcag 257
Query: 152 atacgagcacatgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagg 211
||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atatgagcacataacattgtcggtttggttgtggaatgtcctcagtatttcttcgtaagg 197
Query: 212 gtaccctggacttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagttt 271
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 196 gtaccctggacttaggaagagtcgcaacctgctgagaagaacctgagctcctggaagttt 137
Query: 272 gtcatcccaggtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgctt 331
||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 136 gtcatcccaggtaaatactccatagtttggacttccaaaccagtaggctccagcatgctt 77
Query: 332 cgccattcccggggctgtggcgacggtgaggtacgagttgttccccgtggcgaagtacat 391
||||||||| |||||||||||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 76 cgccattcctggggctgtggcgaccgtgaggtatgaattgttccctgtggcaaagtacat 17
Query: 392 ccacgcaccgccccac 407
||||||||| ||||||
Sbjct: 16 ccacgcaccaccccac 1
>gb|CA486797.1|CA486797 WHE4336_A10_B20ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4336_A10_B20, mRNA sequence
Length = 769
Score = 438 bits (221), Expect = e-121
Identities = 260/273 (95%)
Strand = Plus / Minus
Query: 1 accacccaggcgtgtcagccgcttcaagatagtcgctgtataaagaagcaaggaaagctg 60
|||||||||||||||| || ||||||||||| || |||||||||||||||||||||||||
Sbjct: 273 accacccaggcgtgtctgcagcttcaagataatcactgtataaagaagcaaggaaagctg 214
Query: 61 cgttgacagcgtactgaagcggttgaggccttccatggttgagctgtattaatcctcctt 120
| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 213 cattgacagcatactgaagtggttgaggccttccatggttgagttgtattaatcctcctt 154
Query: 121 tggtgaagttgaatgaattgaatacaggtaaatacgagcacatgacgttgtcggtttggt 180
| |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||
Sbjct: 153 tagtgaagttgaatgaattgaatagaggtaaatacgagcacataacgttgtcagtttggt 94
Query: 181 tgtggaatgtcctcagtatttcttcgtaagggtaccctggacttaggaagagtcgcagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tgtggaatgtcctcagtatttcttcgtaagggtaccctggacttaggaagagtcgcagcc 34
Query: 241 tgctgagaagaacctgagctcctggaagtttgt 273
|||||||||| ||||||||||||||||||||||
Sbjct: 33 tgctgagaaggacctgagctcctggaagtttgt 1
>gb|CA603638.1|CA603638 wr1.pk0029.h4 wr1 Triticum aestivum cDNA clone wr1.pk0029.h4 5'
end, mRNA sequence
Length = 438
Score = 414 bits (209), Expect = e-114
Identities = 348/394 (88%), Gaps = 2/394 (0%)
Strand = Plus / Minus
Query: 49 caaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttgagctgta 108
||||||| ||| | ||||| |||||||||| |||| ||||| |||||||||||| |||
Sbjct: 408 caaggaatgctncattgacgacgtactgaagtggttnaggccctccatggttgagtngta 349
Query: 109 ttaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcacatgacgt 168
| ||||||||||| ||||||||||||||||| ||||| |||||||| || |||||||| |
Sbjct: 348 tcaatcctcctttagtgaagttgaatgaattnaatactggtaaataggancacatgacat 289
Query: 169 tgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctggacttagga 228
|||| |||||||||||||||||||| | ||||||||| ||||| ||||||||||||||||
Sbjct: 288 tgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctggacttagga 229
Query: 229 agagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccaggtaaaca 288
|||| |||| |||||||||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 228 agagccgcaacctgctgagaagaacctgngatcctggaagcttgtcatcccaggtaaaca 169
Query: 289 ctccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattcccggggctg 348
|||| |||||||| || |||| |||| | ||||| |||| |||||||| || || ||||
Sbjct: 168 ctccatagtttgggctaccaatccag-aagctcccgcgt-nttcgccatccctggagctg 111
Query: 349 tggcgacggtgaggtacgagttgttccccgtggcgaagtacatccacgcaccgccccaca 408
|||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tggcgatggtgaggtatgatgtgttccccgtggcgaagtacatccacgcaccgccccaca 51
Query: 409 cgaactcgtcccagtagctggtggagttgtagaa 442
| ||||| ||||||||||||||||| ||||||||
Sbjct: 50 caaactcatcccagtagctggtggaattgtagaa 17
>gb|CA729226.1|CA729226 wdi1c.pk006.i8 wdi1c Triticum aestivum cDNA clone wdi1c.pk006.i8 5'
end, mRNA sequence
Length = 586
Score = 398 bits (201), Expect = e-109
Identities = 306/341 (89%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 349 aaagaggcaaggaaagctgcattgacgacgtactgaagcggttgaggccctccatggttg 290
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 289 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 230
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 229 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 170
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 169 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 110
Query: 282 gtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattccc 341
||||||||||| |||||||| || |||| |||| | || || |||||||| ||||||||
Sbjct: 109 gtaaacactccatagtttgggctaccaatccagaacgcgcctgcgtgctttgccattcct 50
Query: 342 ggggctgtggcgacggtgaggtacgagttgttccccgtggc 382
|| |||||||||| ||||||||| || |||||||||||||
Sbjct: 49 ggagctgtggcgatggtgaggtatgatgtgttccccgtggc 9
>gb|CV766105.1|CV766105 FGAS060492 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 373 bits (188), Expect = e-101
Identities = 308/348 (88%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| |||||||||| |||||||||| ||||||||||
Sbjct: 455 aaagaggcaaggaaagctgcattgacgacgtactgaagtggttgaggccctccatggttg 396
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 395 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 336
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 335 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 276
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 275 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 216
Query: 282 gtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattccc 341
||||||||||| |||||||| || |||| |||| | || || || ||||| ||||| ||
Sbjct: 215 gtaaacactccatagtttgggctgccaatccagaacgcgcctgcatgctttgccatccct 156
Query: 342 ggggctgtggcgacggtgaggtacgagttgttccccgtggcgaagtac 389
|| |||||||||| || |||||||| |||| |||||||||||||||
Sbjct: 155 ggagctgtggcgatcgtcaggtacgatgtgtttcccgtggcgaagtac 108
>gb|CK154571.1|CK154571 FGAS033273 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 871
Score = 367 bits (185), Expect = e-100
Identities = 367/424 (86%), Gaps = 7/424 (1%)
Strand = Plus / Minus
Query: 151 aatacgagcacatgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaag 210
|||| ||||||||||| | || ||||||| ||||||||| | ||||||||| ||||
Sbjct: 770 aataggagcacatgacatgntcagtttggtgtgggaatgtccntaatatttcttcataag 711
Query: 211 ggtaccctggacttaggaagagtcgcagcctgctgaga----agaacctgagctcctgga 266
| |||||||||||||||||||| |||| |||||||||| |||||||| | ||||| |
Sbjct: 710 gataccctggacttaggaagagccgcaacctgctgagatgagagaacctg-gatcctg-a 653
Query: 267 agtttgtcatcccaggtaaacactccgtagtttggacttccaaaccagtatgctccagcg 326
|| |||||||||||||||| |||||| |||||||| || |||| |||| | ||||| |||
Sbjct: 652 agcttgtcatcccaggtaa-cactccatagtttgggctaccaatccagaacgctcccgcg 594
Query: 327 tgcttcgccattcccggggctgtggcgacggtgaggtacgagttgttccccgtggcgaag 386
||||||||||| || || |||||||||| ||||||||| || |||||||||||||||||
Sbjct: 593 tgcttcgccatccctggagctgtggcgatggtgaggtatgatgtgttccccgtggcgaag 534
Query: 387 tacatccacgcaccgccccacacgaactcgtcccagtagctggtggagttgtagaagatg 446
||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |
Sbjct: 533 tacatccacgcaccgccccacacaaactcatcccagtagctggtggaattgtagaacagc 474
Query: 447 gcctggtcagatccgttggggctgtatcgcccacgctgcagcctgccgaacttgtacagg 506
| ||| ||||| || |||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 473 gactgatcagagccattggggctgtatcggccgcgctgcagcctaccgaacttgtacagc 414
Query: 507 gccttggcgcccttgacgagcttgtcggagtaggtcttgctgtccttgaacactatggaa 566
|||||||| || | |||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 413 gccttggcaccgtggacgagcttgtcagagtacgtcttgctgtccttgaacactatggaa 354
Query: 567 gctg 570
||||
Sbjct: 353 gctg 350
>gb|CA639221.1|CA639221 wre1n.pk0022.d10 wre1n Triticum aestivum cDNA clone
wre1n.pk0022.d10 5' end, mRNA sequence
Length = 559
Score = 353 bits (178), Expect = 1e-095
Identities = 289/326 (88%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| |||||||||| |||||||||| ||||||||||
Sbjct: 332 aaagaggcaaggaaagctgcattgacgacgtactgaagtggttgaggccctccatggttg 273
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 272 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 213
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 212 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 153
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 152 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 93
Query: 282 gtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattccc 341
||||||||||| |||||||| || |||| |||| | || || || ||||| ||||| ||
Sbjct: 92 gtaaacactccatagtttgggctgccaatccagaacgcgcctgcatgctttgccatccct 33
Query: 342 ggggctgtggcgacggtgaggtacga 367
|| |||||||||| || ||||||||
Sbjct: 32 ggagctgtggcgatcgtcaggtacga 7
>gb|BM138422.1|BM138422 WHE0497_E04_J07ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0497_E04_J07,
mRNA sequence
Length = 611
Score = 349 bits (176), Expect = 2e-094
Identities = 239/260 (91%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 266 aaagaggcaaggaaagctgcattgacgacgtactgaagcggttgaggccctccatggttg 207
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 206 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 147
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 146 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 87
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 86 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 27
Query: 282 gtaaacactccgtagtttgg 301
||||||||||| ||||||||
Sbjct: 26 gtaaacactccatagtttgg 7
>gb|CA654330.1|CA654330 wre1n.pk164.d9 wre1n Triticum aestivum cDNA clone wre1n.pk164.d9 5'
end, mRNA sequence
Length = 503
Score = 347 bits (175), Expect = 6e-094
Identities = 302/343 (88%), Gaps = 1/343 (0%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| |||||||||| |||||||||| ||||||||||
Sbjct: 343 aaagaggcaaggaaagctgcattgacgacgtactgaagtggttgaggccctccatggttg 284
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaataca-ggtaaatacgagca 160
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 283 agttgtatcaatcctcctttagtgaagttgaatgaattgaatacttggtaaatatgagca 224
Query: 161 catgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgg 220
|||||| ||||| |||||||||||||||||||| | ||||||||| ||||| ||||||||
Sbjct: 223 catgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgg 164
Query: 221 acttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatccca 280
|||||||||||| |||| |||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 163 acttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatccca 104
Query: 281 ggtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcgccattcc 340
|||||||||||| |||||||| || |||| |||| | || || || ||||| ||||| ||
Sbjct: 103 ggtaaacactccatagtttgggctgccaatccagaacgcgcctgcatgctttgccatccc 44
Query: 341 cggggctgtggcgacggtgaggtacgagttgttccccgtggcg 383
|| |||||||||| || |||||||| |||| |||||||||
Sbjct: 43 tggagctgtggcgatcgtcaggtacgatgtgtttcccgtggcg 1
>gb|CA646342.1|CA646342 wre1n.pk0104.c12 wre1n Triticum aestivum cDNA clone
wre1n.pk0104.c12 5' end, mRNA sequence
Length = 545
Score = 325 bits (164), Expect = 2e-087
Identities = 233/256 (91%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||| ||||| ||||| |||||||||| |||||||||| ||||||||||
Sbjct: 256 aaagaggcaaggaatgctgcattgacgacgtactgaagtggttgaggccctccatggttg 197
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 196 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaataggagcac 137
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 136 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 77
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatcccag 281
||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 76 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgtcatcccag 17
Query: 282 gtaaacactccgtagt 297
||||||||||| ||||
Sbjct: 16 gtaaacactccatagt 1
>gb|BQ838634.1|BQ838634 WHE2912_H07_P14ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2912_H07_P14, mRNA
sequence
Length = 685
Score = 309 bits (156), Expect = 1e-082
Identities = 267/304 (87%)
Strand = Plus / Minus
Query: 265 gaagtttgtcatcccaggtaaacactccgtagtttggacttccaaaccagtatgctccag 324
|||| ||||||||||||||||||||||| |||||||| || |||| |||| | || || |
Sbjct: 685 gaagcttgtcatcccaggtaaacactccatagtttgggctaccaatccagaacgcgcctg 626
Query: 325 cgtgcttcgccattcccggggctgtggcgacggtgaggtacgagttgttccccgtggcga 384
||||||| |||||||| || |||||||||| ||||||||| || |||||||||||||||
Sbjct: 625 cgtgctttgccattcctggagctgtggcgatggtgaggtatgatgtgttccccgtggcga 566
Query: 385 agtacatccacgcaccgccccacacgaactcgtcccagtagctggtggagttgtagaaga 444
|||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| |
Sbjct: 565 agtacatccacgcaccaccccacacaaactcatcccagtagctggtggaattgtagaaca 506
Query: 445 tggcctggtcagatccgttggggctgtatcgcccacgctgcagcctgccgaacttgtaca 504
| ||| ||||| || |||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 505 atgactgatcagagccattggggctgtatcgaccgcgctgcagcctaccgaacttgtaca 446
Query: 505 gggccttggcgcccttgacgagcttgtcggagtaggtcttgctgtccttgaacactatgg 564
| |||||||| || | |||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 445 gcgccttggcaccgtggacgagcttgtcagagtacgccttgctgtccttgaacactatgg 386
Query: 565 aagc 568
||||
Sbjct: 385 aagc 382
>gb|CA710168.1|CA710168 wdk2c.pk015.n24 wdk2c Triticum aestivum cDNA clone wdk2c.pk015.n24
5' end, mRNA sequence
Length = 505
Score = 305 bits (154), Expect = 2e-081
Identities = 304/352 (86%), Gaps = 2/352 (0%)
Strand = Plus / Minus
Query: 156 gagcacatgacgttgtcggtttggttgtggaatgtcc-tcagtatttctt-cgtaagggt 213
||||||||||| ||||| ||||||||||||||||||| | | |||||||| | ||||| |
Sbjct: 353 gagcacatgacattgtcagtttggttgtggaatgtcccttaatatttctttcataaggat 294
Query: 214 accctggacttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgt 273
||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 293 accttggacttaggaagagccgcaacctgctgagaagaacctgagatcctggaagcttgt 234
Query: 274 catcccaggtaaacactccgtagtttggacttccaaaccagtatgctccagcgtgcttcg 333
||||||||||||||||||| |||||||| || |||| |||| | || || || ||||| |
Sbjct: 233 catcccaggtaaacactccatagtttgggctgccaatccagaacgcgcctgcatgctttg 174
Query: 334 ccattcccggggctgtggcgacggtgaggtacgagttgttccccgtggcgaagtacatcc 393
|||| || || |||||||||| || |||||||| |||| |||||||||||||||||||
Sbjct: 173 ccatccctggagctgtggcgatcgtcaggtacgatgtgtttcccgtggcgaagtacatcc 114
Query: 394 acgcaccgccccacacgaactcgtcccagtagctggtggagttgtagaagatggcctggt 453
||||||| |||||||| ||||| ||||||||||||||||| |||||||| | | ||| |
Sbjct: 113 acgcaccaccccacacaaactcatcccagtagctggtggaattgtagaacagcgactgat 54
Query: 454 cagatccgttggggctgtatcgcccacgctgcagcctgccgaacttgtacag 505
|||| || |||||||||||||| || ||||||||| | |||||| |||||||
Sbjct: 53 cagagccattggggctgtatcggccgcgctgcagcntaccgaacntgtacag 2
>gb|CA732801.1|CA732801 wlp1c.pk004.j5 wlp1c Triticum aestivum cDNA clone wlp1c.pk004.j5 5'
end, mRNA sequence
Length = 594
Score = 291 bits (147), Expect = 3e-077
Identities = 207/227 (91%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 236 aaagaggcaaggaaagctgcattgacgacgtactgaagcggttgaggccctccatggttg 177
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||
Sbjct: 176 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactagtaaatatgagcac 117
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 116 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 57
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgagctcctggaag 268
||||||||||| |||| |||||||||||||||||||| |||||||||
Sbjct: 56 cttaggaagagccgcaacctgctgagaagaacctgagatcctggaag 10
>gb|BE493065.1|BE493065 WHE0560_B01_C02ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0560_B01_C02, mRNA
sequence
Length = 352
Score = 281 bits (142), Expect = 3e-074
Identities = 230/258 (89%), Gaps = 1/258 (0%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||| ||||| |||||| | |||||||| |||||||||| |||||||||
Sbjct: 265 aaagaggcaaggaatgctgcattgacaacatactgaagtggttgaggccctccatggttc 206
Query: 102 agct-gtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagca 160
|||| | || | ||||||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 205 agctcgcatcagtcctcctttagtgaagttgaaagaattgaatactggtaaatatgagca 146
Query: 161 catgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgg 220
|||||| ||||| |||||||||||||||||||| | ||||||||| ||||| ||||||||
Sbjct: 145 catgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgg 86
Query: 221 acttaggaagagtcgcagcctgctgagaagaacctgagctcctggaagtttgtcatccca 280
|||||||||||| |||| |||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 85 acttaggaagagccgcaacctgctgagaagaacctgagatcctgcaagcttgtcatccca 26
Query: 281 ggtaaacactccgtagtt 298
|||||||||||| |||||
Sbjct: 25 ggtaaacactccatagtt 8
>gb|CA715946.1|CA715946 wdk3c.pk016.b10 wdk3c Triticum aestivum cDNA clone wdk3c.pk016.b10
5' end, mRNA sequence
Length = 434
Score = 280 bits (141), Expect = 1e-073
Identities = 198/217 (91%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| |||||||||| |||||||||| ||||||||||
Sbjct: 217 aaagaggcaaggaaagctgcattgacgacgtactgaagtggttgaggccctccatggttg 158
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 157 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 98
Query: 162 atgacgttgtcggtttggttgtggaatgtcctcagtatttcttcgtaagggtaccctgga 221
||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 97 atgacattgtcagtttggttgtggaatgtccttaatatttcttcataaggataccctgga 38
Query: 222 cttaggaagagtcgcagcctgctgagaagaacctgag 258
||||||||||| |||| ||||||||||||||||||||
Sbjct: 37 cttaggaagagccgcaacctgctgagaagaacctgag 1
>gb|BJ256315.1|BJ256315 BJ256315 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh4n09 5', mRNA sequence
Length = 643
Score = 256 bits (129), Expect = 2e-066
Identities = 198/221 (89%)
Strand = Plus / Minus
Query: 350 ggcgacggtgaggtacgagttgttccccgtggcgaagtacatccacgcaccgccccacac 409
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ggcgatggtgaggtatgatgtgttccccgtggcgaagtacatccacgcaccgccccacac 584
Query: 410 gaactcgtcccagtagctggtggagttgtagaagatggcctggtcagatccgttggggct 469
||||| ||||||||||||||||| |||||||| | | ||| ||||| || ||||||||
Sbjct: 583 aaactcatcccagtagctggtggaattgtagaacagcgactgatcagagccattggggct 524
Query: 470 gtatcgcccacgctgcagcctgccgaacttgtacagggccttggcgcccttgacgagctt 529
|||||| || ||||||||||| |||||||||||||| |||||||| || | |||||||||
Sbjct: 523 gtatcggccgcgctgcagcctaccgaacttgtacagcgccttggcaccgtggacgagctt 464
Query: 530 gtcggagtaggtcttgctgtccttgaacactatggaagctg 570
||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 463 gtcagagtacgtcttgctgtccttgaacactatggaagctg 423
>gb|BJ256097.1|BJ256097 BJ256097 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh3o06 5', mRNA sequence
Length = 660
Score = 226 bits (114), Expect = 2e-057
Identities = 171/190 (90%)
Strand = Plus / Minus
Query: 381 gcgaagtacatccacgcaccgccccacacgaactcgtcccagtagctggtggagttgtag 440
||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 660 gcgaagtacatccacgcaccgccccacacaaactcatcccagtagctggtggaattgtag 601
Query: 441 aagatggcctggtcagatccgttggggctgtatcgcccacgctgcagcctgccgaacttg 500
|| | | ||| ||||| || |||||||||||||| || ||||||||||| |||||||||
Sbjct: 600 aacagcgactgatcagagccattggggctgtatcggccgcgctgcagcctaccgaacttg 541
Query: 501 tacagggccttggcgcccttgacgagcttgtcggagtaggtcttgctgtccttgaacact 560
||||| |||||||| || | |||||||||||| ||||| |||||||||||||||||||||
Sbjct: 540 tacagcgccttggcaccgtggacgagcttgtcagagtacgtcttgctgtccttgaacact 481
Query: 561 atggaagctg 570
||||||||||
Sbjct: 480 atggaagctg 471
>gb|BE496969.1|BE496969 WHE0762_B06_D12ZS Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0762_B06_D12, mRNA
sequence
Length = 508
Score = 190 bits (96), Expect = 9e-047
Identities = 135/148 (91%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| |||||||||| |||||||||| ||||||||||
Sbjct: 148 aaagaggcaaggaaagctgcattgacgacgtactgaagtggttgaggccctccatggttg 89
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 88 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 29
Query: 162 atgacgttgtcggtttggttgtggaatg 189
||||| ||||| ||||||||||||||||
Sbjct: 28 atgacattgtcagtttggttgtggaatg 1
>gb|BQ483825.1|BQ483825 WHE3513_A10_A19ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3513_A10_A19, mRNA sequence
Length = 790
Score = 172 bits (87), Expect = 2e-041
Identities = 120/131 (91%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 142 aaagaggcaaggaaagctgcattgacgacgtactgaagcggttgaggccctccatggttg 83
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 82 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 23
Query: 162 atgacgttgtc 172
||||| |||||
Sbjct: 22 atgacattgtc 12
>gb|CD887428.1|CD887428 G118.105C24F010605 G118 Triticum aestivum cDNA clone G118105C24,
mRNA sequence
Length = 608
Score = 172 bits (87), Expect = 2e-041
Identities = 120/131 (91%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 142 aaagaggcaaggaaagctgcattgacgacgtactgaagcggttgaggccctccatggttg 83
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 82 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 23
Query: 162 atgacgttgtc 172
||||| |||||
Sbjct: 22 atgacattgtc 12
>gb|AL817980.1|AL817980 AL817980 j:223 Triticum aestivum cDNA clone C10_j223_plate_10, mRNA
sequence
Length = 328
Score = 157 bits (79), Expect = 1e-036
Identities = 111/122 (90%)
Strand = Plus / Minus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| | ||| ||||||||||||||||||||| ||||||||||
Sbjct: 122 aaagaggcaaggaaagctgcatngacgacgtactgaagcggttgaggccctccatggttg 63
Query: 102 agctgtattaatcctcctttggtgaagttgaatgaattgaatacaggtaaatacgagcac 161
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 62 agttgtatcaatcctcctttagtgaagttgaatgaattgaatactggtaaatatgagcac 3
Query: 162 at 163
||
Sbjct: 2 at 1
>gb|BJ309500.1|BJ309500 BJ309500 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd20g21 3', mRNA sequence
Length = 731
Score = 91.7 bits (46), Expect = 6e-017
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 42 aaagaagcaaggaaagctgcgttgacagcgtactgaagcggttgaggccttccatggttg 101
||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 658 aaagaggcaaggaaagctgcattgacgacgtactgaagcggttgaggccctccatggttg 717
Query: 102 agctgtattaatcc 115
|| ||||| |||||
Sbjct: 718 agttgtatcaatcc 731
>gb|BQ838506.1|BQ838506 WHE2911_C09_F17ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2911_C09_F17, mRNA
sequence
Length = 510
Score = 87.7 bits (44), Expect = 9e-016
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 368 gttgttccccgtggcgaagtacatccacgcaccgccccacacgaactcgtcccagtagct 427
|||||| ||||||||| |||||||||| | ||| ||||| ||||||||||||||||||
Sbjct: 294 gttgttgcccgtggcgtagtacatccaggaggcgctccacatgaactcgtcccagtagct 235
Query: 428 ggtggagttgtagaag 443
||||||||||||||||
Sbjct: 234 ggtggagttgtagaag 219
>gb|CA731948.1|CA731948 wlp1c.pk002.h11 wlp1c Triticum aestivum cDNA clone wlp1c.pk002.h11
5' end, mRNA sequence
Length = 637
Score = 87.7 bits (44), Expect = 9e-016
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 368 gttgttccccgtggcgaagtacatccacgcaccgccccacacgaactcgtcccagtagct 427
|||||| ||||||||| |||||||||| | ||| ||||| ||||||||||||||||||
Sbjct: 345 gttgttgcccgtggcgtagtacatccaggaggcgctccacatgaactcgtcccagtagct 286
Query: 428 ggtggagttgtagaag 443
||||||||||||||||
Sbjct: 285 ggtggagttgtagaag 270
>gb|CD891166.1|CD891166 G118.116G13F010723 G118 Triticum aestivum cDNA clone G118116G13,
mRNA sequence
Length = 668
Score = 87.7 bits (44), Expect = 9e-016
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 368 gttgttccccgtggcgaagtacatccacgcaccgccccacacgaactcgtcccagtagct 427
|||||| ||||||||| |||||||||| | ||| ||||| ||||||||||||||||||
Sbjct: 417 gttgttgcccgtggcgtagtacatccaggaggcgctccacatgaactcgtcccagtagct 358
Query: 428 ggtggagttgtagaag 443
||||||||||||||||
Sbjct: 357 ggtggagttgtagaag 342
>gb|CD930195.1|CD930195 GR45.110I16F010418 GR45 Triticum aestivum cDNA clone GR45110I16,
mRNA sequence
Length = 578
Score = 87.7 bits (44), Expect = 9e-016
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 368 gttgttccccgtggcgaagtacatccacgcaccgccccacacgaactcgtcccagtagct 427
|||||| ||||||||| |||||||||| | ||| ||||| ||||||||||||||||||
Sbjct: 80 gttgttgcccgtggcgtagtacatccaggaggcgctccacatgaactcgtcccagtagct 21
Query: 428 ggtggagttgtagaag 443
||||||||||||||||
Sbjct: 20 ggtggagttgtagaag 5
>gb|CD939288.1|CD939288 OV.113B03F010313 OV Triticum aestivum cDNA clone OV113B03, mRNA
sequence
Length = 691
Score = 87.7 bits (44), Expect = 9e-016
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 368 gttgttccccgtggcgaagtacatccacgcaccgccccacacgaactcgtcccagtagct 427
|||||| ||||||||| |||||||||| | ||| ||||| ||||||||||||||||||
Sbjct: 154 gttgttgcccgtggcgtagtacatccaggaggcgctccacatgaactcgtcccagtagct 95
Query: 428 ggtggagttgtagaag 443
||||||||||||||||
Sbjct: 94 ggtggagttgtagaag 79
>gb|CV522413.1|CV522413 RH-1166 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 427
Score = 87.7 bits (44), Expect = 9e-016
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 368 gttgttccccgtggcgaagtacatccacgcaccgccccacacgaactcgtcccagtagct 427
|||||| ||||||||| |||||||||| | ||| ||||| ||||||||||||||||||
Sbjct: 121 gttgttgcccgtggcgtagtacatccaggaggcgctccacatgaactcgtcccagtagct 62
Query: 428 ggtggagttgtagaag 443
||||||||||||||||
Sbjct: 61 ggtggagttgtagaag 46
>gb|AJ611772.1|AJ611772 AJ611772 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 05339R, mRNA
sequence
Length = 701
Score = 73.8 bits (37), Expect = 1e-011
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 368 gttgttccccgtggcgaagtacatccacgcaccgccccacacgaactcgtcccagtagct 427
|||||| || |||||| |||||||||| | ||| ||||| ||||||||||||||||||
Sbjct: 123 gttgttgccggtggcgtagtacatccaggaggcgctccacatgaactcgtcccagtagct 64
Query: 428 ggtggagttgtag 440
|||||||||||||
Sbjct: 63 ggtggagttgtag 51
>gb|BQ788847.1|BQ788847 WHE4154_E06_J12ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4154_E06_J12, mRNA sequence
Length = 405
Score = 69.9 bits (35), Expect = 2e-010
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 378 gtggcgaagtacatccacgcaccgccccacacgaactcgtcccagtagctggtggagttg 437
|||||| |||||||||| | ||| ||||| ||||||||||||||||||||||||||||
Sbjct: 399 gtggcgtagtacatccaggaggcgctccacatgaactcgtcccagtagctggtggagttg 340
Query: 438 tag 440
|||
Sbjct: 339 tag 337
>gb|CK197099.1|CK197099 FGAS005570 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 818
Score = 56.0 bits (28), Expect = 3e-006
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 413 ctcgtcccagtagctggtggagttgtag 440
||||||||||||||||||||||||||||
Sbjct: 810 ctcgtcccagtagctggtggagttgtag 783
>gb|BI751095.1|BI751095 Ta01_04a02_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_04a02, mRNA
sequence
Length = 291
Score = 54.0 bits (27), Expect = 1e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 542 cttgctgtccttgaacactatggaagc 568
|||||||||||||||||||||||||||
Sbjct: 287 cttgctgtccttgaacactatggaagc 261
>gb|CD869247.1|CD869247 AZO2.111C04F001115 AZO2 Triticum aestivum cDNA clone AZO2111C04,
mRNA sequence
Length = 511
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 420 cagtagctggtggagttgtag 440
|||||||||||||||||||||
Sbjct: 508 cagtagctggtggagttgtag 488
>gb|CV776138.1|CV776138 FGAS070542 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 830
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 412 actcgtcccagtagctggtggagt 435
||||||||| ||||||||||||||
Sbjct: 819 actcgtccccgtagctggtggagt 796
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 110,825
Number of Sequences: 636343
Number of extensions: 110825
Number of successful extensions: 29695
Number of sequences better than 0.5: 38
Number of HSP's better than 0.5 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29634
Number of HSP's gapped (non-prelim): 57
length of query: 689
length of database: 367,240,239
effective HSP length: 19
effective length of query: 670
effective length of database: 355,149,722
effective search space: 237950313740
effective search space used: 237950313740
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)