BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE36e08.yg.2.1
(352 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD909805.1|CD909805 G468.113J06R010929 G468 Triticum aes... 424 e-117
gb|CA712305.1|CA712305 wdk3c.pk005.c9 wdk3c Triticum aestiv... 377 e-103
gb|BE430514.1|BE430514 SUN003.F12R991208 ITEC SUN Wheat cDN... 355 1e-096
gb|BQ294620.1|BQ294620 WHE2851_E09_I17ZS Wheat unstressed r... 343 5e-093
gb|CD491640.1|CD491640 WHE2851_E09_I17ZT CS wheat unstresse... 297 3e-079
gb|CK200003.1|CK200003 FGAS008510 Triticum aestivum FGAS: L... 246 8e-064
gb|CK199656.1|CK199656 FGAS008160 Triticum aestivum FGAS: L... 157 6e-037
gb|CD909804.1|CD909804 G468.113J06F010821 G468 Triticum aes... 131 3e-029
gb|CD868080.1|CD868080 AZO2.107P20R010515 AZO2 Triticum aes... 103 8e-021
gb|BJ281253.1|BJ281253 BJ281253 Y. Ogihara unpublished cDNA... 74 7e-012
gb|BJ286316.1|BJ286316 BJ286316 Y. Ogihara unpublished cDNA... 74 7e-012
gb|CA622381.1|CA622381 wl1n.pk0091.e3 wl1n Triticum aestivu... 60 1e-007
gb|BQ753073.1|BQ753073 WHE4122_F11_K22ZS Wheat salt-stresse... 58 4e-007
gb|CV775699.1|CV775699 FGAS070103 Triticum aestivum FGAS: L... 58 4e-007
gb|BJ277445.1|BJ277445 BJ277445 Y. Ogihara unpublished cDNA... 56 2e-006
gb|CA620836.1|CA620836 wl1n.pk0069.g6 wl1n Triticum aestivu... 52 3e-005
gb|BF201692.1|BF201692 WHE1774_E05_J10ZS Wheat pre-anthesis... 48 4e-004
gb|CA608059.1|CA608059 wr1.pk0086.b12 wr1 Triticum aestivum... 48 4e-004
gb|CA613946.1|CA613946 wr1.pk182.f9 wr1 Triticum aestivum c... 48 4e-004
gb|CA614878.1|CA614878 wr1.pk183.d3 wr1 Triticum aestivum c... 48 4e-004
gb|CA641231.1|CA641231 wre1n.pk0041.f4 wre1n Triticum aesti... 48 4e-004
gb|CD373848.1|CD373848 WHE2607_A07_B13ZT Sumai3 Wheat Fusar... 48 4e-004
gb|CA625498.1|CA625498 wl1n.pk0140.d11 wl1n Triticum aestiv... 46 0.002
gb|BG606868.1|BG606868 WHE2454_C06_F12ZS Triticum monococcu... 40 0.098
gb|BU672356.1|BU672356 WHE3303_F03_L05ZS Chinese Spring whe... 40 0.098
gb|CA620226.1|CA620226 wl1n.pk0053.c9 wl1n Triticum aestivu... 40 0.098
gb|CD491996.1|CD491996 WHE2454_C06_F12ZT Triticum monococcu... 40 0.098
gb|DR741015.1|DR741015 FGAS000947 Triticum aestivum FGAS: L... 38 0.39
>gb|CD909805.1|CD909805 G468.113J06R010929 G468 Triticum aestivum cDNA clone G468113J06,
mRNA sequence
Length = 724
Score = 424 bits (214), Expect = e-117
Identities = 290/317 (91%)
Strand = Plus / Plus
Query: 3 gggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcatg 62
|||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 400 gggttgtagttgccgaacccggtggcgagcacgtagaagtggtagccgtggatgtgcatg 459
Query: 63 gggtgctcctcggcggcgaagatgcccgtgtcctggaacacgatctgcaccacggcgccg 122
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 460 gggtgctcctccgcggcgaagatgcccgtgtcctggaacaccatctgcaccacggcgccg 519
Query: 123 tacctgacgcggtacaggcgggtgcccttgacgggctgccacagcgcgcgcgggacgttc 182
||| ||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 520 tacttgacgcggtacagccgcgtgcccttcacgggctgccacagcgcgcgggggacgttc 579
Query: 183 tgcgaggtgaagtcgaagaacacgggcgggagcgccgggaagtcgtcggtgaacacgccg 242
||||||||| ||||||||| ||| |||||| | ||||||||||| |||||||| ||||||
Sbjct: 580 tgcgaggtgtagtcgaagaccaccggcgggcgagccgggaagtcctcggtgaagacgccg 639
Query: 243 gggatgtggtggtagtgcgcctgcagcagggagacggtgtcggggagctggaacgacacg 302
|||||| |||||||||||||||| |||||| ||||||||| |||||||||||| ||||||
Sbjct: 640 gggatgcggtggtagtgcgcctggagcaggaagacggtgttggggagctggaaggacacg 699
Query: 303 nnnnncatgctcgcgcc 319
||||||||||||
Sbjct: 700 ttgttcatgctcgcgcc 716
>gb|CA712305.1|CA712305 wdk3c.pk005.c9 wdk3c Triticum aestivum cDNA clone wdk3c.pk005.c9 5'
end, mRNA sequence
Length = 492
Score = 377 bits (190), Expect = e-103
Identities = 276/302 (91%), Gaps = 2/302 (0%)
Strand = Plus / Minus
Query: 3 gggtcgtagttgccgaaccccg-tggccagcacgtagaagtggtagccgtggatgtgcat 61
|||| |||||||||||| |||| ||| |||||||||||||||||||| |||||||||||
Sbjct: 366 gggttgtagttgccgaaacccggtggttagcacgtagaagtggtagccatggatgtgcat 307
Query: 62 ggggtgctcctcggcggcgaagatgcccgtgtcct-ggaacacgatctgcaccacggcgc 120
|||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 306 ggggtgctcctccgcggcgaagatgcccgtgtccttggaacaccatctgcaccacggcgc 247
Query: 121 cgtacctgacgcggtacaggcgggtgcccttgacgggctgccacagcgcgcgcgggacgt 180
||||| ||||||||||||| || |||||||| |||||||||||||||||||| |||||||
Sbjct: 246 cgtacttgacgcggtacagccgcgtgcccttcacgggctgccacagcgcgcgggggacgt 187
Query: 181 tctgcgaggtgaagtcgaagaacacgggcgggagcgccgggaagtcgtcggtgaacacgc 240
||||||||||| |||| |||| ||| |||||| | || |||||||| || ||||| ||||
Sbjct: 186 tctgcgaggtgtagtcaaagaccaccggcgggcgagcggggaagtcctctgtgaagacgc 127
Query: 241 cggggatgtggtggtagtgcgcctgcagcagggagacggtgtcggggagctggaacgaca 300
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 126 cggggatgcggtggtagtgcgcctgcagcagggagacggtgttggggagctggaacgaca 67
Query: 301 cg 302
||
Sbjct: 66 cg 65
>gb|BE430514.1|BE430514 SUN003.F12R991208 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN003.F12, mRNA sequence
Length = 844
Score = 355 bits (179), Expect = 1e-096
Identities = 269/294 (91%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 3 gggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcatg 62
|||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 403 gggttgtagttgccgaacccggtggcgagcacgtagaagtggtagccgtggatgtgcatg 462
Query: 63 gggtgctcctcggcggcgaagatgcccgtgtcctggaacacgatctgcaccacggcgccg 122
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 463 gggtgctcctccgcggcgaagatgcccgtgtcctggaacaccatctgcaccacggcgccg 522
Query: 123 tacctgacgcggtacaggcgggtgcccttgacgggctgccacagcgcgcgcgggacgttc 182
||| ||||||||||||| || |||||||| |||||||| ||||||||||| |||||||||
Sbjct: 523 tacttgacgcggtacagccgcgtgcccttcacgggctg-cacagcgcgcgggggacgttc 581
Query: 183 tgcgaggtgaagtcgaagaacacgggcgggagcgccgggaagtcgtcggtgaacacgccg 242
||||||||| |||| |||| ||| |||||| | ||||||||||| |||||||| ||||||
Sbjct: 582 tgcgaggtgtagtc-aagaccaccggcgggcgagccgggaagtcctcggtgaagacgccg 640
Query: 243 gggatgtggtggtagtgcgcctgcagc-agggagacggtgtcggggagctggaa 295
|||||| ||||| |||||||||| ||| |||||||||| || ||||||||||||
Sbjct: 641 gggatgcggtggnagtgcgcctggagcaagggagacgg-gttggggagctggaa 693
>gb|BQ294620.1|BQ294620 WHE2851_E09_I17ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2851_E09_I17, mRNA sequence
Length = 591
Score = 343 bits (173), Expect = 5e-093
Identities = 255/284 (89%)
Strand = Plus / Minus
Query: 36 tagaagtggtagccgtggatgtgcatggggtgctcctcggcggcgaagatgcccgtgtcc 95
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 591 tagaagtggtagccgtggatgtgcatggggtgctcctccgccgcgaagatgcccgtgtcc 532
Query: 96 tggaacacgatctgcaccacggcgccgtacctgacgcggtacaggcgggtgcccttgacg 155
|||||||| |||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 531 tggaacaccatctgcaccacggcgccgtacctgacgcggtacacccgcgtgcccttgacc 472
Query: 156 ggctgccacagcgcgcgcgggacgttctgcgaggtgaagtcgaagaacacgggcgggagc 215
||||||||||||||||| |||||| ||||||||||| |||||||| ||| ||||| |
Sbjct: 471 ggctgccacagcgcgcgggggacgctctgcgaggtgtagtcgaaggccaccggcggccga 412
Query: 216 gccgggaagtcgtcggtgaacacgccggggatgtggtggtagtgcgcctgcagcagggag 275
|||||||||||||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct: 411 gccgggaagtcgtcggtgaagacgccggggatgcggccgtagtgcgcctgcagcagggcc 352
Query: 276 acggtgtcggggagctggaacgacacgnnnnncatgctcgcgcc 319
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 351 acggtgctggggagctggaacgacacgttgttcatgctcgcgcc 308
>gb|CD491640.1|CD491640 WHE2851_E09_I17ZT CS wheat unstressed root tip cDNA library
Triticum aestivum cDNA clone WHE2851_E09_I17, mRNA
sequence
Length = 629
Score = 297 bits (150), Expect = 3e-079
Identities = 180/190 (94%)
Strand = Plus / Plus
Query: 2 cgggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcat 61
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 436 cgggtcgtagttgccgaacccggtggcgagcacgtagaagtggtagccgtggatgtgcat 495
Query: 62 ggggtgctcctcggcggcgaagatgcccgtgtcctggaacacgatctgcaccacggcgcc 121
|||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 496 ggggtgctcctccgccgcgaagatgcccgtgtcctggaacaccatctgcaccacggcgcc 555
Query: 122 gtacctgacgcggtacaggcgggtgcccttgacgggctgccacagcgcgcgcgggacgtt 181
|||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||| |
Sbjct: 556 gtacctgacgcggtacagccgcgtgcccttgaccggctgccacagcgcgcgggggacgct 615
Query: 182 ctgcgaggtg 191
||||||||||
Sbjct: 616 ctgcgaggtg 625
>gb|CK200003.1|CK200003 FGAS008510 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 776
Score = 246 bits (124), Expect = 8e-064
Identities = 221/253 (87%), Gaps = 2/253 (0%)
Strand = Plus / Minus
Query: 67 gctcctcggcggcgaagatgcccgtgtcctggaacacgatctgcaccacggcgccgtacc 126
||||||| ||||||| |||||||||||| ||||||| || ||||||||||| ||||||
Sbjct: 511 gctcctccccggcgaaaatgcccgtgtcc-ggaacaccatttgcaccacggccccgtac- 454
Query: 127 tgacgcggtacaggcgggtgcccttgacgggctgccacagcgcgcgcgggacgttctgcg 186
|||| |||||||| || |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 453 tgacccggtacagccgcgtgcccttcacgggctgccacagcgcgcgggggacgttctgcg 394
Query: 187 aggtgaagtcgaagaacacgggcgggagcgccgggaagtcgtcggtgaacacgccgggga 246
||||| ||||||||| | |||||| | ||| ||||||| |||||||| ||||||||||
Sbjct: 393 aggtgtagtcgaagacanccggcgggcgagccnggaagtcctcggtgaagacgccgggga 334
Query: 247 tgtggtggtagtgcgcctgcagcagggagacggtgtcggggagctggaacgacacgnnnn 306
|| |||||||||||||||| |||||||||||||||| |||||||||||| ||||||
Sbjct: 333 tgcggtggtagtgcgcctggagcagggagacggtgttggggagctggaaggacacgttgt 274
Query: 307 ncatgctcgcgcc 319
||||||||||||
Sbjct: 273 tcatgctcgcgcc 261
>gb|CK199656.1|CK199656 FGAS008160 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 839
Score = 157 bits (79), Expect = 6e-037
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 3 gggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcatg 62
|||| ||| ||||||||||| ||||| ||||| || || |||||||||||||||||||||
Sbjct: 584 gggttgtatttgccgaacccggtggcgagcacttaaaattggtagccgtggatgtgcatg 643
Query: 63 gggtgctcctcggcggcgaagatgcccgtgtcctggaacacgatctgcaccacggcgcc 121
||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 644 gggtgctcctccgcggcgaagatgcccgtgtcctggaacaccatcttcaccacggcgcc 702
>gb|CD909804.1|CD909804 G468.113J06F010821 G468 Triticum aestivum cDNA clone G468113J06,
mRNA sequence
Length = 589
Score = 131 bits (66), Expect = 3e-029
Identities = 110/127 (86%)
Strand = Plus / Minus
Query: 193 agtcgaagaacacgggcgggagcgccgggaagtcgtcggtgaacacgccggggatgtggt 252
||||||| | ||| |||||| | ||||||||||| |||||||| || ||||||||| |||
Sbjct: 589 agtcgaanaccaccggcgggcgagccgggaagtcctcggtgaaaacnccggggatgcggt 530
Query: 253 ggtagtgcgcctgcagcagggagacggtgtcggggagctggaacgacacgnnnnncatgc 312
||||||||||||| |||||||||||||||| |||||||||||| |||||| |||||
Sbjct: 529 ggtagtgcgcctggagcagggagacggtgttggggagctggaaggacacgttgttcatgc 470
Query: 313 tcgcgcc 319
|||||||
Sbjct: 469 tcgcgcc 463
>gb|CD868080.1|CD868080 AZO2.107P20R010515 AZO2 Triticum aestivum cDNA clone AZO2107P20,
mRNA sequence
Length = 454
Score = 103 bits (52), Expect = 8e-021
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 3 gggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcatg 62
|||| ||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 379 gggtagtagttgccgaacccggtggctagcacgtacaagtggtagccatggatgtgcatg 438
Query: 63 gggtgctcctcggcgg 78
||||||||||| ||||
Sbjct: 439 gggtgctcctccgcgg 454
>gb|BJ281253.1|BJ281253 BJ281253 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21d06 5', mRNA sequence
Length = 383
Score = 73.8 bits (37), Expect = 7e-012
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 3 gggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgt 51
|||| ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 53 gggttgtagttgccgaacccggtggcgagcacgtagaagtggtagccgt 5
>gb|BJ286316.1|BJ286316 BJ286316 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21d06 3', mRNA sequence
Length = 332
Score = 73.8 bits (37), Expect = 7e-012
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 3 gggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgt 51
|||| ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 283 gggttgtagttgccgaacccggtggcgagcacgtagaagtggtagccgt 331
>gb|CA622381.1|CA622381 wl1n.pk0091.e3 wl1n Triticum aestivum cDNA clone wl1n.pk0091.e3 5'
end, mRNA sequence
Length = 486
Score = 60.0 bits (30), Expect = 1e-007
Identities = 216/278 (77%)
Strand = Plus / Minus
Query: 3 gggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcatg 62
|||||| |||||||||| ||| ||| || | | |||| | ||||||||||||||| |||
Sbjct: 312 gggtcgaagttgccgaagccctcggcgaggatgaagaaatcgtagccgtggatgtggatg 253
Query: 63 gggtgctcctcggcggcgaagatgcccgtgtcctggaacacgatctgcaccacggcgccg 122
||||| | ||||| | || ||||| |||||||| | |||| ||||||||||| ||||
Sbjct: 252 gggtggttctcgggcgtgacgatgctggtgtcctgcaggacgagctgcaccacggagccg 193
Query: 123 tacctgacgcggtacaggcgggtgcccttgacgggctgccacagcgcgcgcgggacgttc 182
|||||| ||||||| |||| | ||| ||||||||||| || | |||||||
Sbjct: 192 aacctgagcgggtacagcttggtggcggggaccggctgccacagggcctggctgacgttc 133
Query: 183 tgcgaggtgaagtcgaagaacacgggcgggagcgccgggaagtcgtcggtgaacacgccg 242
||| ||| ||||||| |||||||||| |||||||||||| |||||| ||||||
Sbjct: 132 tgccccgtgtagtcgaactgcacgggcgggtatgccgggaagtcggtggtgaagacgccg 73
Query: 243 gggatgtggtggtagtgcgcctgcagcagggagacggt 280
||||| | || ||||||||| || || |||||| ||||
Sbjct: 72 gggatcttgtagtagtgcgcgtggaggagggagtcggt 35
>gb|BQ753073.1|BQ753073 WHE4122_F11_K22ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4122_F11_K22, mRNA sequence
Length = 660
Score = 58.0 bits (29), Expect = 4e-007
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 5 gtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcatggg 64
||||||||||||||| ||| ||| || | |||||||| ||||||||||| ||| |||||
Sbjct: 298 gtcgtagttgccgaagccctcggcgaggatgtagaagtcgtagccgtggaggtggatggg 239
Query: 65 gtgctcctcggcggcgaagatgcccgtgtcctggaacacgatctgcaccacggcgccgta 124
||| | ||| | | || ||||| |||||||| | |||| ||||||||||| |||| |
Sbjct: 238 gtggttctccggcgtgacgatgctggtgtcctgcaggacgacctgcaccacggagccgaa 179
Query: 125 cctga 129
|||||
Sbjct: 178 cctga 174
Score = 40.1 bits (20), Expect = 0.098
Identities = 80/100 (80%)
Strand = Plus / Minus
Query: 176 gacgttctgcgaggtgaagtcgaagaacacgggcgggagcgccgggaagtcgtcggtgaa 235
||||||||||| ||| ||||||| ||| |||||| |||||||||||| |||| |
Sbjct: 127 gacgttctgcgccgtgtagtcgaactgcaccggcgggttggccgggaagtcggtggtgta 68
Query: 236 cacgccggggatgtggtggtagtgcgcctgcagcagggag 275
|||||| || |||| || ||||||||| || || ||||||
Sbjct: 67 cacgcccggcatgtcgtagtagtgcgcgtggaggagggag 28
>gb|CV775699.1|CV775699 FGAS070103 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 818
Score = 58.0 bits (29), Expect = 4e-007
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 5 gtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcatggg 64
||||||||||||||| ||| ||| || | |||||||| ||||||||||| ||| |||||
Sbjct: 480 gtcgtagttgccgaagccctcggcgaggatgtagaagtcgtagccgtggaggtggatggg 421
Query: 65 gtgctcctcggcggcgaagatgcccgtgtcctggaacacgatctgcaccacggcgccgta 124
|| | ||| | | || ||||| |||||||| | ||||| ||||||||||| |||| |
Sbjct: 420 atggttctccggcgtgacgatgctggtgtcctgcagcacgacctgcaccacggagccgaa 361
Query: 125 cctga 129
|||||
Sbjct: 360 cctga 356
>gb|BJ277445.1|BJ277445 BJ277445 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr11i06 5', mRNA sequence
Length = 394
Score = 56.0 bits (28), Expect = 2e-006
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 37 agaagtggtagccgtggatgtgcatggggtgctcctcggcggcgaagatgcccgtgtcct 96
|||||| |||||| ||| |||| || ||||| | ||| ||||||||||| ||| |||
Sbjct: 88 agaagtcgtagccatgggtgtggatagggtggttctccccggcgaagatgttggtgccct 29
Query: 97 ggaacacgatctgcaccacggcgccgta 124
||| ||||||||||||||||| ||||||
Sbjct: 28 ggagcacgatctgcaccacggagccgta 1
>gb|CA620836.1|CA620836 wl1n.pk0069.g6 wl1n Triticum aestivum cDNA clone wl1n.pk0069.g6 5'
end, mRNA sequence
Length = 624
Score = 52.0 bits (26), Expect = 3e-005
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 203 cacgggcgggagcgccgggaagtcgtcggtgaacacgccggggatgtggtggtagtgcgc 262
|||||||||| |||||||||||| |||||| ||||||||||| | || |||||||||
Sbjct: 112 cacgggcgggtatgccgggaagtcggtggtgaagacgccggggatcttgtagtagtgcgc 53
Query: 263 ctgcagcagggagacggt 280
|| || |||||| ||||
Sbjct: 52 gtggaggagggagtcggt 35
>gb|BF201692.1|BF201692 WHE1774_E05_J10ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1774_E05_J10, mRNA sequence
Length = 429
Score = 48.1 bits (24), Expect = 4e-004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 5 gtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtg 52
|||||||||||||||||||||| | | |||| ||||| |||||||||
Sbjct: 254 gtcgtagttgccgaaccccgtgccgacgacgtggaagtcgtagccgtg 207
>gb|CA608059.1|CA608059 wr1.pk0086.b12 wr1 Triticum aestivum cDNA clone wr1.pk0086.b12 5'
end, mRNA sequence
Length = 676
Score = 48.1 bits (24), Expect = 4e-004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 5 gtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtg 52
|||||||||||||||||||||| | | |||| ||||| |||||||||
Sbjct: 267 gtcgtagttgccgaaccccgtgccgactacgtggaagtcgtagccgtg 220
>gb|CA613946.1|CA613946 wr1.pk182.f9 wr1 Triticum aestivum cDNA clone wr1.pk182.f9 5' end,
mRNA sequence
Length = 519
Score = 48.1 bits (24), Expect = 4e-004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 5 gtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtg 52
|||||||||||||||||||||| | | |||| ||||| |||||||||
Sbjct: 199 gtcgtagttgccgaaccccgtgccgactacgtggaagtcgtagccgtg 152
>gb|CA614878.1|CA614878 wr1.pk183.d3 wr1 Triticum aestivum cDNA clone wr1.pk183.d3 5'
end, mRNA sequence
Length = 481
Score = 48.1 bits (24), Expect = 4e-004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 5 gtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtg 52
|||||||||||||||||||||| | | |||| ||||| |||||||||
Sbjct: 64 gtcgtagttgccgaaccccgtgccgactacgtggaagtcgtagccgtg 17
>gb|CA641231.1|CA641231 wre1n.pk0041.f4 wre1n Triticum aestivum cDNA clone wre1n.pk0041.f4
5' end, mRNA sequence
Length = 538
Score = 48.1 bits (24), Expect = 4e-004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 5 gtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtg 52
|||||||||||||||||||||| | | |||| ||||| |||||||||
Sbjct: 199 gtcgtagttgccgaaccccgtgccgactacgtggaagtcgtagccgtg 152
>gb|CD373848.1|CD373848 WHE2607_A07_B13ZT Sumai3 Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE2607_A07_B13, mRNA sequence
Length = 694
Score = 48.1 bits (24), Expect = 4e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 3 gggtcgtagttgccgaaccccgtggccagcacgtagaagtggtagccgtggatgtgcatg 62
|||| ||||||||||| || ||||| || ||| |||||| |||||| |||| |||||||
Sbjct: 540 gggttgtagttgccgagtcctgtggcgaggacgaagaagtcgtagccatggaggtgcatg 599
Query: 63 gggt 66
||||
Sbjct: 600 gggt 603
>gb|CA625498.1|CA625498 wl1n.pk0140.d11 wl1n Triticum aestivum cDNA clone wl1n.pk0140.d11
5' end, mRNA sequence
Length = 515
Score = 46.1 bits (23), Expect = 0.002
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 207 ggcgggagcgccgggaagtcgtcggtgaacacgccgggg 245
|||||| |||||||||||||| |||||| |||||||||
Sbjct: 279 ggcgggtgcgccgggaagtcggtggtgaagacgccgggg 241
>gb|BG606868.1|BG606868 WHE2454_C06_F12ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2454_C06_F12,
mRNA sequence
Length = 453
Score = 40.1 bits (20), Expect = 0.098
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 3 gggtcgtagttgccgaaccc 22
||||||||||||||||||||
Sbjct: 206 gggtcgtagttgccgaaccc 187
>gb|BU672356.1|BU672356 WHE3303_F03_L05ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3303_F03_L05,
mRNA sequence
Length = 537
Score = 40.1 bits (20), Expect = 0.098
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 gggtcgtagttgccgaaccc 22
||||||||||||||||||||
Sbjct: 510 gggtcgtagttgccgaaccc 529
>gb|CA620226.1|CA620226 wl1n.pk0053.c9 wl1n Triticum aestivum cDNA clone wl1n.pk0053.c9 5'
end, mRNA sequence
Length = 480
Score = 40.1 bits (20), Expect = 0.098
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 207 ggcgggagcgccgggaagtcgtcggtgaacacgccgggg 245
|||||| |||||||||||||| |||||| || ||||||
Sbjct: 279 ggcgggtgcgccgggaagtcggtggtgaagacnccgggg 241
>gb|CD491996.1|CD491996 WHE2454_C06_F12ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2454_C06_F12, mRNA sequence
Length = 690
Score = 40.1 bits (20), Expect = 0.098
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 gggtcgtagttgccgaaccc 22
||||||||||||||||||||
Sbjct: 560 gggtcgtagttgccgaaccc 579
>gb|DR741015.1|DR741015 FGAS000947 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1138
Score = 38.2 bits (19), Expect = 0.39
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 146 gcccttgacgggctgccacagcg 168
||||||||||||||| |||||||
Sbjct: 103 gcccttgacgggctggcacagcg 81
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 91,316
Number of Sequences: 636343
Number of extensions: 91316
Number of successful extensions: 27533
Number of sequences better than 0.5: 28
Number of HSP's better than 0.5 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27481
Number of HSP's gapped (non-prelim): 42
length of query: 352
length of database: 367,240,239
effective HSP length: 19
effective length of query: 333
effective length of database: 355,149,722
effective search space: 118264857426
effective search space used: 118264857426
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)