BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5110719.2.1
(581 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ802220.1|BQ802220 WHE2823_D08_H15ZS Triticum monococcu... 309 1e-082
gb|CV768489.1|CV768489 FGAS062880 Triticum aestivum FGAS: L... 289 1e-076
gb|BJ303646.1|BJ303646 BJ303646 Y. Ogihara unpublished cDNA... 285 2e-075
gb|CD923111.1|CD923111 G750.106J19F010529 G750 Triticum aes... 285 2e-075
gb|CV778575.1|CV778575 FGAS072984 Triticum aestivum FGAS: L... 285 2e-075
gb|CV775340.1|CV775340 FGAS069744 Triticum aestivum FGAS: L... 278 4e-073
gb|BF482727.1|BF482727 WHE2301-2304_B07_B07ZS Wheat pre-ant... 270 1e-070
gb|CD887554.1|CD887554 G118.105J09F010605 G118 Triticum aes... 270 1e-070
gb|CV770480.1|CV770480 FGAS064873 Triticum aestivum FGAS: L... 220 8e-056
gb|CV776943.1|CV776943 FGAS071347 Triticum aestivum FGAS: L... 204 5e-051
gb|CD936087.1|CD936087 OV.103I17F010202 OV Triticum aestivu... 192 2e-047
gb|BF482815.1|BF482815 WHE2301-2304_B08_B08ZS Wheat pre-ant... 159 3e-037
gb|CV775877.1|CV775877 FGAS070281 Triticum aestivum FGAS: L... 135 4e-030
gb|CK167602.1|CK167602 FGAS052001 Triticum aestivum FGAS: T... 96 3e-018
gb|DR733072.1|DR733072 FGAS077327 Triticum aestivum FGAS: T... 96 3e-018
gb|DR733107.1|DR733107 FGAS077362 Triticum aestivum FGAS: T... 96 3e-018
gb|DR733110.1|DR733110 FGAS077365 Triticum aestivum FGAS: T... 96 3e-018
gb|DR733119.1|DR733119 FGAS077374 Triticum aestivum FGAS: T... 96 3e-018
gb|DR733120.1|DR733120 FGAS077375 Triticum aestivum FGAS: T... 96 3e-018
gb|DR733122.1|DR733122 FGAS077377 Triticum aestivum FGAS: T... 96 3e-018
gb|BJ309525.1|BJ309525 BJ309525 Y. Ogihara unpublished cDNA... 88 8e-016
gb|CK164509.1|CK164509 FGAS048422 Triticum aestivum FGAS: T... 80 2e-013
gb|CA644002.1|CA644002 wre1n.pk0076.a2 wre1n Triticum aesti... 74 1e-011
gb|CK162812.1|CK162812 FGAS015412 Triticum aestivum FGAS: L... 64 1e-008
gb|CK164815.1|CK164815 FGAS048738 Triticum aestivum FGAS: T... 62 4e-008
gb|CD934967.1|CD934967 OV.002H19F010109 OV Triticum aestivu... 58 7e-007
gb|CK209229.1|CK209229 FGAS020984 Triticum aestivum FGAS: L... 54 1e-005
gb|CK208364.1|CK208364 FGAS020074 Triticum aestivum FGAS: L... 52 4e-005
gb|DR736884.1|DR736884 FGAS082254 Triticum aestivum FGAS: L... 52 4e-005
gb|BQ162659.1|BQ162659 WHE0446_F01_K02ZT Wheat etiolated se... 50 2e-004
gb|CK154993.1|CK154993 FGAS033712 Triticum aestivum FGAS: T... 50 2e-004
gb|CK164558.1|CK164558 FGAS048472 Triticum aestivum FGAS: T... 50 2e-004
gb|CK164602.1|CK164602 FGAS048517 Triticum aestivum FGAS: T... 50 2e-004
gb|CK164239.1|CK164239 FGAS048138 Triticum aestivum FGAS: T... 48 7e-004
gb|BJ236054.1|BJ236054 BJ236054 Y. Ogihara unpublished cDNA... 44 0.011
gb|BJ241362.1|BJ241362 BJ241362 Y. Ogihara unpublished cDNA... 44 0.011
gb|CA745901.1|CA745901 wri2s.pk003.h19 wri2s Triticum aesti... 44 0.011
gb|CA746486.1|CA746486 wri2s.pk007.g24 wri2s Triticum aesti... 44 0.011
gb|CD870767.1|CD870767 AZO2.115H14F001117 AZO2 Triticum aes... 44 0.011
gb|CD872974.1|CD872974 AZO2.122B09F010208 AZO2 Triticum aes... 44 0.011
gb|BJ229791.1|BJ229791 BJ229791 Y. Ogihara unpublished cDNA... 40 0.16
gb|CD871889.1|CD871889 AZO2.119E22F010207 AZO2 Triticum aes... 40 0.16
gb|CD939474.1|CD939474 OV.113L19F010313 OV Triticum aestivu... 40 0.16
gb|CD939475.1|CD939475 OV.113L19R010410 OV Triticum aestivu... 40 0.16
>gb|BQ802220.1|BQ802220 WHE2823_D08_H15ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2823_D08_H15, mRNA
sequence
Length = 766
Score = 309 bits (156), Expect = 1e-082
Identities = 249/280 (88%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 370 gattaacaatataccatgtgaaaagtcacttgcagaaatacaggctagcaaagtacattc 429
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
|||| ||||| ||||||| |||||| | ||||||||||| ||||| |||| || || |
Sbjct: 430 ctgactcttcagctgatggtaacaaggctgataacaaagatccaggggattcactagcag 489
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 490 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 549
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||||||||||||||||||||| | ||||| ||||| |
Sbjct: 550 aaaagcggttgcatgaacagctcgaagtacaaaggcagctgcagctgcgaatcgaggcac 609
Query: 241 agggaaagtacctccagaagatcatcgaagagcagcagcg 280
||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 610 agggaaagtaccttaagaaaatcatagaagagcagcagcg 649
>gb|CV768489.1|CV768489 FGAS062880 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 289 bits (146), Expect = 1e-076
Identities = 245/277 (88%), Gaps = 1/277 (0%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 552 gattaacaatataccatgtgaaaagtcacttgcagaaatacaggctagcaaagtacattc 611
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
|||| ||||| ||||||| |||||| | ||||||||||| ||||| |||| ||| || |
Sbjct: 612 ctgactcttcagctgatggtaacaag-ctgataacaaagatccaggggattcgctagcag 670
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 671 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 730
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||||||| ||||||||||||| | ||||| ||||| |
Sbjct: 731 aaaagcgggtgcatgaacagcttgaagtaccaaggcagctgcagctgcgaatcgaggcac 790
Query: 241 agggaaagtacctccagaagatcatcgaagagcagca 277
||||||||||||| ||| ||||| |||||||||||
Sbjct: 791 agggaaagtaccttangaaaatcatagaagagcagca 827
>gb|BJ303646.1|BJ303646 BJ303646 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd20i09 5', mRNA sequence
Length = 705
Score = 285 bits (144), Expect = 2e-075
Identities = 246/280 (87%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 382 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 441
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| |||||| | ||||||||||| ||||| |||| || || |
Sbjct: 442 ccgactcttcagctgatggtaacaaggctgataacaaagatccaggggattcactagcag 501
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 502 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 561
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||||||||||||||||||||| | ||||| ||||| |
Sbjct: 562 aaaagcggttgcatgaacagctcgaagtacaaaggcagctgcagctgcgaatcgaggcac 621
Query: 241 agggaaagtacctccagaagatcatcgaagagcagcagcg 280
||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 622 agggaaagtaccttaagaaaatcatagaagagcagcagcg 661
>gb|CD923111.1|CD923111 G750.106J19F010529 G750 Triticum aestivum cDNA clone G750106J19,
mRNA sequence
Length = 604
Score = 285 bits (144), Expect = 2e-075
Identities = 246/280 (87%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 25 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 84
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| |||||| | ||||||||||| ||||| |||| || || |
Sbjct: 85 ccgactcttcagctgatggtaacaaggctgataacaaagatccaggggattcactagcag 144
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 145 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 204
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||||||||||||||||||||| | ||||| ||||| |
Sbjct: 205 aaaagcggttgcatgaacagctcgaagtacaaaggcagctgcagctgcgaatcgaggcac 264
Query: 241 agggaaagtacctccagaagatcatcgaagagcagcagcg 280
||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 265 agggaaagtaccttaagaaaatcatagaagagcagcagcg 304
>gb|CV778575.1|CV778575 FGAS072984 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 829
Score = 285 bits (144), Expect = 2e-075
Identities = 246/280 (87%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 278 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 337
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| |||||| | ||||||||||| ||||| |||| || || |
Sbjct: 338 ccgactcttcagctgatggtaacaaggctgataacaaagatccaggggattcactagcag 397
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 398 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 457
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||||||||||||||||||||| | ||||| ||||| |
Sbjct: 458 aaaagcggttgcatgaacagctcgaagtacaaaggcagctgcagctgcgaatcgaggcac 517
Query: 241 agggaaagtacctccagaagatcatcgaagagcagcagcg 280
||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 518 agggaaagtaccttaagaaaatcatagaagagcagcagcg 557
>gb|CV775340.1|CV775340 FGAS069744 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 830
Score = 278 bits (140), Expect = 4e-073
Identities = 246/280 (87%), Gaps = 1/280 (0%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 499 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 558
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| |||||| | ||||||||||| ||||| |||| || || |
Sbjct: 559 ccgactcttcagctgatggtaacaaggctgataacaaagatccaggggattcactagcag 618
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 619 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 678
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||||||||||||||||||||| | ||||| ||||| |
Sbjct: 679 aaaagcggttgcatgaacagctcgaagtacaaaggcagctgcagctgcgaatcgaggcac 738
Query: 241 agggaaagtacctccagaagatcatcgaagagcagcagcg 280
||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 739 agggaaagtaccttaagaa-atcatagaagagcagcagcg 777
>gb|BF482727.1|BF482727 WHE2301-2304_B07_B07ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE2301-2304_B07_B07, mRNA
sequence
Length = 575
Score = 270 bits (136), Expect = 1e-070
Identities = 238/272 (87%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 304 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 363
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| |||||| | ||||||||||| ||||| |||| || || |
Sbjct: 364 ccgactcttcagctgatggtaacaaggctgataacaaagatccaggggattcactagcag 423
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 424 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 483
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||||||||||||||||||||| | ||||| ||||| |
Sbjct: 484 aaaagcggttgcatgaacagctcgaagtacaaaggcagctgcagctgcgaatcgaggcac 543
Query: 241 agggaaagtacctccagaagatcatcgaagag 272
||||||||||||| |||| ||||| ||||||
Sbjct: 544 agggaaagtaccttaagaaaatcatagaagag 575
>gb|CD887554.1|CD887554 G118.105J09F010605 G118 Triticum aestivum cDNA clone G118105J09,
mRNA sequence
Length = 539
Score = 270 bits (136), Expect = 1e-070
Identities = 244/280 (87%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||| ||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 193 gattagcaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 252
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| |||||| | ||||||||||| ||||| |||| || || |
Sbjct: 253 ccgactcttcagctgatggtaacaaggctgataacaaagatccaggggattcactagcag 312
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 313 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 372
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||||||||||||||||||||| | ||||| ||||| |
Sbjct: 373 aaaagcggttgcatgaacagctcgaagtacaaaggcagctgcagctgcgaatcgaggcac 432
Query: 241 agggaaagtacctccagaagatcatcgaagagcagcagcg 280
||||||||||||| |||| |||| ||||||||||||||
Sbjct: 433 agggaaagtaccttaagaaactcatagaagagcagcagcg 472
>gb|CV770480.1|CV770480 FGAS064873 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 864
Score = 220 bits (111), Expect = 8e-056
Identities = 213/247 (86%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 477 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 536
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| ||| || | ||||||||||| ||||| |||| || || |
Sbjct: 537 ccgactcttcagctgatggtaaccaggctgataacaaagatccaggggattcactagcag 596
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||| ||
Sbjct: 597 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggccc 656
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||| |||||||||||||||| | ||||| ||||| |
Sbjct: 657 aaaagcggttgcatgaacagctccaagaacaaaggcagctgcagctgcgaatcgaggcac 716
Query: 241 agggaaa 247
|||||||
Sbjct: 717 agggaaa 723
>gb|CV776943.1|CV776943 FGAS071347 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 845
Score = 204 bits (103), Expect = 5e-051
Identities = 217/251 (86%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 498 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 557
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| | |||| | |||||||| || ||||| ||| || || |
Sbjct: 558 ccgactcttcagctgatggta-caaggctgataacaa-gatccaggggatca-ctagcag 614
Query: 121 gacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtcc 180
||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 615 gacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtcc 674
Query: 181 aaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggctc 240
|||||||| |||| |||||| | ||| ||||||||||||||||| | ||||| ||||| |
Sbjct: 675 aaaagcggttgcatgaacagctcgaaatacaaaggcagctgcagctgcgaatcgaggcac 734
Query: 241 agggaaagtac 251
|||||||||||
Sbjct: 735 agggaaagtac 745
>gb|CD936087.1|CD936087 OV.103I17F010202 OV Triticum aestivum cDNA clone OV103I17, mRNA
sequence
Length = 708
Score = 192 bits (97), Expect = 2e-047
Identities = 145/161 (90%)
Strand = Plus / Plus
Query: 120 ggacttgagggatcctctggattgcagatatctgaagccctcaaactgcagatggaggtc 179
|||||||| |||||||||||| ||||||||||||||||||| || |||||||||||||||
Sbjct: 16 ggacttgatggatcctctggaatgcagatatctgaagccctgaagctgcagatggaggtc 75
Query: 180 caaaagcggctgcacgaacagttagaagtacaaaggcagctgcagttacgaattgaggct 239
||||||||| |||| |||||| | ||||||||||||||||||||| | ||||| |||||
Sbjct: 76 caaaagcggttgcatgaacagcttgaagtacaaaggcagctgcagctgcgaatcgaggca 135
Query: 240 cagggaaagtacctccagaagatcatcgaagagcagcagcg 280
|||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 136 cagggaaagtaccttaagaaaatcatagaagagcagcagcg 176
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 552 agggcagccaagaggcagcgaggcag 577
|||||||| |||||||||||||||||
Sbjct: 439 agggcagcaaagaggcagcgaggcag 464
>gb|BF482815.1|BF482815 WHE2301-2304_B08_B08ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE2301-2304_B08_B08, mRNA
sequence
Length = 471
Score = 159 bits (80), Expect = 3e-037
Identities = 140/160 (87%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 304 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctagcaaagtacattc 363
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaagacccaggagatttgcttgccg 120
| || ||||| ||||||| |||||| | ||||||||||| ||||| |||| || || |
Sbjct: 364 ccgactcttcagctgatggtaacaaggctgataacaaagatccaggggattcactagcag 423
Query: 121 gacttgagggatcctctggattgcagatatctgaagccct 160
||||||| |||||||||||| |||||||||||||||||||
Sbjct: 424 gacttgatggatcctctggaatgcagatatctgaagccct 463
>gb|CV775877.1|CV775877 FGAS070281 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 839
Score = 135 bits (68), Expect = 4e-030
Identities = 129/147 (87%), Gaps = 3/147 (2%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattc 60
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 555 gattaacaatataccatgtgaaaagtcacttgcagaaatacaggctagcaaagtacattc 614
Query: 61 ctgatgcttcaactgatgggaacaagaccgataacaaaga--cccaggagatttgcttgc 118
|||| ||||| ||||||| |||||| | ||||||||||| ||| ||| ||| ||| ||
Sbjct: 615 ctgactcttcagctgatggtaacaaggctgataacaaagattcccggga-attcgctagc 673
Query: 119 cggacttgagggatcctctggattgca 145
|||||||| |||||||||||| ||||
Sbjct: 674 aggacttgatggatcctctggaatgca 700
>gb|CK167602.1|CK167602 FGAS052001 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1190
Score = 95.6 bits (48), Expect = 3e-018
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 645 tgcagatggaggtgcagaagcggctgcatgaacaattagaggtacaaaggcagctacagc 704
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagcagcagcgc 281
| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 705 tcagaatagaagcccaaggcaagtatctccagaagatcatggaggagcagcagcgc 760
>gb|DR733072.1|DR733072 FGAS077327 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1072
Score = 95.6 bits (48), Expect = 3e-018
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 658 tgcagatggaggtgcagaagcggctgcatgaacaattagaggtacaaaggcagctacagc 717
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagcagcagcgc 281
| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 718 tcagaatagaagcccaaggcaagtatctccagaagatcatggaggagcagcagcgc 773
>gb|DR733107.1|DR733107 FGAS077362 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1167
Score = 95.6 bits (48), Expect = 3e-018
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 646 tgcagatggaggtgcagaagcggctgcatgaacaattagaggtacaaaggcagctacagc 705
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagcagcagcgc 281
| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 706 tcagaatagaagcccaaggcaagtatctccagaagatcatggaggagcagcagcgc 761
>gb|DR733110.1|DR733110 FGAS077365 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1147
Score = 95.6 bits (48), Expect = 3e-018
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 645 tgcagatggaggtgcagaagcggctgcatgaacaattagaggtacaaaggcagctacagc 704
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagcagcagcgc 281
| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 705 tcagaatagaagcccaaggcaagtatctccagaagatcatggaggagcagcagcgc 760
>gb|DR733119.1|DR733119 FGAS077374 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1129
Score = 95.6 bits (48), Expect = 3e-018
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 654 tgcagatggaggtgcagaagcggctgcatgaacaattagaggtacaaaggcagctacagc 713
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagcagcagcgc 281
| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 714 tcagaatagaagcccaaggcaagtatctccagaagatcatggaggagcagcagcgc 769
>gb|DR733120.1|DR733120 FGAS077375 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1173
Score = 95.6 bits (48), Expect = 3e-018
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 645 tgcagatggaggtgcagaagcggctgcatgaacaattagaggtacaaaggcagctacagc 704
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagcagcagcgc 281
| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 705 tcagaatagaagcccaaggcaagtatctccagaagatcatggaggagcagcagcgc 760
>gb|DR733122.1|DR733122 FGAS077377 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1106
Score = 95.6 bits (48), Expect = 3e-018
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 651 tgcagatggaggtgcagaagcggctgcatgaacaattagaggtacaaaggcagctacagc 710
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagcagcagcgc 281
| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 711 tcagaatagaagcccaaggcaagtatctccagaagatcatggaggagcagcagcgc 766
>gb|BJ309525.1|BJ309525 BJ309525 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd20i09 3', mRNA sequence
Length = 666
Score = 87.7 bits (44), Expect = 8e-016
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 205 aagtacaaaggcagctgcagttacgaattgaggctcagggaaagtacctccagaagatca 264
|||||||||||||||||||| | ||||| ||||| |||||||||||||| |||| ||||
Sbjct: 666 aagtacaaaggcagctgcagctgcgaatcgaggcacagggaaagtaccttaagaaaatca 607
Query: 265 tcgaagagcagcagcg 280
| ||||||||||||||
Sbjct: 606 tagaagagcagcagcg 591
>gb|CK164509.1|CK164509 FGAS048422 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 895
Score = 79.8 bits (40), Expect = 2e-013
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 703 tgcagatggaggtgcagaagcggctgcatgaacaattagaggtacaaaggcagctacagc 762
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcat 265
| |||| ||||| ||||| |||| ||||||||||||||
Sbjct: 763 tcagaatagaggcccaggg-cagtatctccagaagatcat 801
>gb|CA644002.1|CA644002 wre1n.pk0076.a2 wre1n Triticum aestivum cDNA clone wre1n.pk0076.a2
5' end, mRNA sequence
Length = 496
Score = 73.8 bits (37), Expect = 1e-011
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatg-taaaaagtcacttgcagaaatacagactagcaaagtatatt 59
|||||||||||||||||| | ||||||||| | ||||||||||| ||||||||||| |||
Sbjct: 339 gattaacaatataccatggtgaaaagtcacctacagaaatacaggctagcaaagtacatt 398
Query: 60 cctgatgcttcaactgatggg 80
|| || ||||| ||||||||
Sbjct: 399 cccgactcttcagctgatggg 419
>gb|CK162812.1|CK162812 FGAS015412 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1017
Score = 63.9 bits (32), Expect = 1e-008
Identities = 92/108 (85%), Gaps = 3/108 (2%)
Strand = Plus / Plus
Query: 1 gattaacaatataccatgtaaaaagtcacttgcagaaatacagact-agcaaagtatatt 59
||||||||||||||||||| ||||||||| | ||||||||||| || ||| ||||| |||
Sbjct: 629 gattaacaatataccatgtgaaaagtcacctacagaaatacaggctcagc-aagtacatt 687
Query: 60 -cctgatgcttcaactgatgggaacaagaccgataacaaagacccagg 106
|| || ||||| ||||||| |||||| | ||||||||||| |||||
Sbjct: 688 ccccgactcttcagctgatggtaacaaggctgataacaaagatccagg 735
>gb|CK164815.1|CK164815 FGAS048738 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 888
Score = 61.9 bits (31), Expect = 4e-008
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 207 gtacaaaggcagctgcagttacgaattgaggctcagggaaagtacctccagaagatcatc 266
|||||||||||||| ||| | |||| ||||| || || ||||| ||||||||||||||
Sbjct: 841 gtacaaaggcagctacagctcagaatagaggcccaaggcaagtatctccagaagatcatg 782
Query: 267 gaagagcagcagcgc 281
|| ||||||||||||
Sbjct: 781 gaggagcagcagcgc 767
>gb|CD934967.1|CD934967 OV.002H19F010109 OV Triticum aestivum cDNA clone OV002H19, mRNA
sequence
Length = 714
Score = 58.0 bits (29), Expect = 7e-007
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
||||| ||||||| || |||||||| | ||||| ||||| |||||||||||||| |||
Sbjct: 606 tgcaggtggaggtacagaagcggctacgtgaacaattagaggtacaaaggcagctacagc 665
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagca 274
| |||| || || || || ||||| |||||||||||||| || |||||
Sbjct: 666 tcagaatagaagcccaaggcaagtatctccagaagatcatggaggagca 714
>gb|CK209229.1|CK209229 FGAS020984 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1167
Score = 54.0 bits (27), Expect = 1e-005
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 207 gtacaaaggcagctgcagttacgaattgaggctcagggaaagtacctccagaagatcatc 266
|||||||||||||| ||| | |||| || || || || ||||| ||||||||||||||
Sbjct: 739 gtacaaaggcagctacagctcagaatagaagcccaaggcaagtatctccagaagatcatg 680
Query: 267 gaagagcagcagcgc 281
|| ||||||||||||
Sbjct: 679 gaggagcagcagcgc 665
>gb|CK208364.1|CK208364 FGAS020074 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 52.0 bits (26), Expect = 4e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 12 taccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattcc 61
||||||||||| ||||| |||||||| ||| ||| ||||||||||||||
Sbjct: 670 taccatgtaaagagtcatttgcagaagtaccgacacgcaaagtatattcc 621
Score = 48.1 bits (24), Expect = 7e-004
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
|||| |||||||| || |||| ||| || |||||| |||| || |||||||||||||||
Sbjct: 513 tgcaaatggaggttcagaagcagctccatgaacagctagaggtgcaaaggcagctgcagc 454
Query: 226 tacg 229
||||
Sbjct: 453 tacg 450
>gb|DR736884.1|DR736884 FGAS082254 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1146
Score = 52.0 bits (26), Expect = 4e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 12 taccatgtaaaaagtcacttgcagaaatacagactagcaaagtatattcc 61
||||||||||| ||||| |||||||| ||| ||| ||||||||||||||
Sbjct: 505 taccatgtaaagagtcatttgcagaagtaccgacacgcaaagtatattcc 554
Score = 48.1 bits (24), Expect = 7e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
|||| |||||||| || |||| ||| || |||||| |||| || |||||||||||||||
Sbjct: 662 tgcaaatggaggttcagaagcagctccatgaacagctagaggtgcaaaggcagctgcagc 721
Query: 226 tacg 229
||||
Sbjct: 722 tacg 725
>gb|BQ162659.1|BQ162659 WHE0446_F01_K02ZT Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0446_F01_K02, mRNA
sequence
Length = 409
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 537 agtccaaaccatgaaagggcagccaagaggcagcgaggcag 577
|||||||| || || |||||||| |||||||||||||||||
Sbjct: 407 agtccaaagcacgagagggcagcaaagaggcagcgaggcag 367
>gb|CK154993.1|CK154993 FGAS033712 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 892
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 537 agtccaaaccatgaaagggcagccaagaggcagcgaggcag 577
|||||||| || || |||||||| |||||||||||||||||
Sbjct: 627 agtccaaagcacgagagggcagcaaagaggcagcgaggcag 587
>gb|CK164558.1|CK164558 FGAS048472 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 893
Score = 50.1 bits (25), Expect = 2e-004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 173 ggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagct 220
|||||| || ||||||||||| ||||| | ||| ||||||||||||||
Sbjct: 875 ggaggtgcagaagcggctgcatgaacaatnagaggtacaaaggcagct 828
>gb|CK164602.1|CK164602 FGAS048517 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 883
Score = 50.1 bits (25), Expect = 2e-004
Identities = 95/116 (81%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 167 gcagatggaggtccaaaagcggctgcacgaacagttagaag-tacaaaggcagctgcagt 225
|||||||||||| || ||||||||||| || || | ||| | ||||||||||||| |||
Sbjct: 883 gcagatggaggtgcagaagcggctgcatgaccaat-agagggtacaaaggcagctacagc 825
Query: 226 tacgaattgaggctcagggaaagtacctccagaagatcatcgaagagcagcagcgc 281
| |||| || || | || ||||| |||||||||||||| || ||||||||||||
Sbjct: 824 tcagaatagaagccnaaggcaagtatctccagaagatcatggaggagcagcagcgc 769
>gb|CK164239.1|CK164239 FGAS048138 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 866
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 246 aagtacctccagaagatcatcgaagagcagcagcgc 281
||||| |||||||||||||| || ||||||||||||
Sbjct: 801 aagtatctccagaagatcatggaggagcagcagcgc 766
>gb|BJ236054.1|BJ236054 BJ236054 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe20c17 5', mRNA sequence
Length = 424
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 552 agggcagccaagaggcagcgaggcag 577
|||||||| |||||||||||||||||
Sbjct: 168 agggcagcaaagaggcagcgaggcag 193
>gb|BJ241362.1|BJ241362 BJ241362 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe20c17 3', mRNA sequence
Length = 484
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 552 agggcagccaagaggcagcgaggcag 577
|||||||| |||||||||||||||||
Sbjct: 308 agggcagcaaagaggcagcgaggcag 283
>gb|CA745901.1|CA745901 wri2s.pk003.h19 wri2s Triticum aestivum cDNA clone wri2s.pk003.h19
5' end, mRNA sequence
Length = 529
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 552 agggcagccaagaggcagcgaggcag 577
|||||||| |||||||||||||||||
Sbjct: 174 agggcagcaaagaggcagcgaggcag 199
>gb|CA746486.1|CA746486 wri2s.pk007.g24 wri2s Triticum aestivum cDNA clone wri2s.pk007.g24
5' end, mRNA sequence
Length = 528
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 552 agggcagccaagaggcagcgaggcag 577
|||||||| |||||||||||||||||
Sbjct: 355 agggcagcaaagaggcagcgaggcag 330
>gb|CD870767.1|CD870767 AZO2.115H14F001117 AZO2 Triticum aestivum cDNA clone AZO2115H14,
mRNA sequence
Length = 520
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 552 agggcagccaagaggcagcgaggcag 577
|||||||| |||||||||||||||||
Sbjct: 145 agggcagcaaagaggcagcgaggcag 170
>gb|CD872974.1|CD872974 AZO2.122B09F010208 AZO2 Triticum aestivum cDNA clone AZO2122B09,
mRNA sequence
Length = 573
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 552 agggcagccaagaggcagcgaggcag 577
|||||||| |||||||||||||||||
Sbjct: 236 agggcagcaaagaggcagcgaggcag 261
>gb|BJ229791.1|BJ229791 BJ229791 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl20d01 3', mRNA sequence
Length = 590
Score = 40.1 bits (20), Expect = 0.16
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 15 catgtaaaaagtcacttgcagaaatacagactagcaaagtatat 58
|||||||| ||||| |||||||| ||| ||| |||||||||||
Sbjct: 546 catgtaaagagtcatttgcagaagtaccgacacgcaaagtatat 503
>gb|CD871889.1|CD871889 AZO2.119E22F010207 AZO2 Triticum aestivum cDNA clone AZO2119E22,
mRNA sequence
Length = 663
Score = 40.1 bits (20), Expect = 0.16
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 15 catgtaaaaagtcacttgcagaaatacagactagcaaagtatat 58
|||||||| ||||| |||||||| ||| ||| |||||||||||
Sbjct: 33 catgtaaagagtcatttgcagaagtaccgacacgcaaagtatat 76
>gb|CD939474.1|CD939474 OV.113L19F010313 OV Triticum aestivum cDNA clone OV113L19, mRNA
sequence
Length = 694
Score = 40.1 bits (20), Expect = 0.16
Identities = 53/64 (82%)
Strand = Plus / Plus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
|||| |||||||| || || | ||| || |||||| |||| || |||||||||||||||
Sbjct: 232 tgcaaatggaggttcagaaacagctccatgaacagctagaggtgcaaaggcagctgcagc 291
Query: 226 tacg 229
||||
Sbjct: 292 tacg 295
>gb|CD939475.1|CD939475 OV.113L19R010410 OV Triticum aestivum cDNA clone OV113L19, mRNA
sequence
Length = 675
Score = 40.1 bits (20), Expect = 0.16
Identities = 53/64 (82%)
Strand = Plus / Minus
Query: 166 tgcagatggaggtccaaaagcggctgcacgaacagttagaagtacaaaggcagctgcagt 225
|||| |||||||| || || | ||| || |||||| |||| || |||||||||||||||
Sbjct: 581 tgcaaatggaggttcagaaacagctccatgaacagctagaggtgcaaaggcagctgcagc 522
Query: 226 tacg 229
||||
Sbjct: 521 tacg 518
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 112,856
Number of Sequences: 636343
Number of extensions: 112856
Number of successful extensions: 28108
Number of sequences better than 0.5: 44
Number of HSP's better than 0.5 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28039
Number of HSP's gapped (non-prelim): 64
length of query: 581
length of database: 367,240,239
effective HSP length: 19
effective length of query: 562
effective length of database: 355,149,722
effective search space: 199594143764
effective search space used: 199594143764
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)