BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4580138.2.1
(1484 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA625432.1|CA625432 wl1n.pk0139.a12 wl1n Triticum aestiv... 898 0.0
gb|BQ752794.1|BQ752794 WHE4119_C01_F01ZS Wheat salt-stresse... 615 e-174
gb|CV777405.1|CV777405 FGAS071811 Triticum aestivum FGAS: L... 533 e-149
gb|CV779185.1|CV779185 FGAS073594 Triticum aestivum FGAS: L... 470 e-130
gb|CK156979.1|CK156979 FGAS038038 Triticum aestivum FGAS: T... 428 e-118
gb|CV759641.1|CV759641 FGAS054025 Triticum aestivum FGAS: L... 422 e-116
gb|CD883726.1|CD883726 F1.114D21F010503 F1 Triticum aestivu... 398 e-109
gb|AL826415.1|AL826415 AL826415 p:537 Triticum aestivum cDN... 391 e-106
gb|CK205892.1|CK205892 FGAS017447 Triticum aestivum FGAS: L... 383 e-104
gb|BJ292532.1|BJ292532 BJ292532 Y. Ogihara unpublished cDNA... 319 3e-085
gb|CA603953.1|CA603953 wr1.pk0034.h5 wr1 Triticum aestivum ... 268 1e-069
gb|DR733560.1|DR733560 FGAS079318 Triticum aestivum FGAS: L... 232 6e-059
gb|CK215073.1|CK215073 FGAS027021 Triticum aestivum FGAS: L... 220 2e-055
gb|CD934158.1|CD934158 GR45.123D07F010723 GR45 Triticum aes... 212 5e-053
gb|BJ298989.1|BJ298989 BJ298989 Y. Ogihara unpublished cDNA... 192 5e-047
gb|CK195665.1|CK195665 FGAS004107 Triticum aestivum FGAS: L... 167 3e-039
gb|CD934159.1|CD934159 GR45.123D07R010830 GR45 Triticum aes... 159 7e-037
gb|CA683516.1|CA683516 wlm96.pk0018.h11 wlm96 Triticum aest... 145 1e-032
gb|BJ292530.1|BJ292530 BJ292530 Y. Ogihara unpublished cDNA... 119 6e-025
gb|AJ611086.1|AJ611086 AJ611086 Triticum turgidum subsp. du... 105 9e-021
gb|CA693320.1|CA693320 wlm96.pk061.j3 wlm96 Triticum aestiv... 86 8e-015
gb|BJ298987.1|BJ298987 BJ298987 Y. Ogihara unpublished cDNA... 68 2e-009
gb|CA639812.1|CA639812 wre1n.pk0027.d10 wre1n Triticum aest... 66 7e-009
gb|CA690856.1|CA690856 wlm96.pk050.e9 wlm96 Triticum aestiv... 46 0.007
gb|CA700577.1|CA700577 wkm1c.pk005.p12 wkm1c Triticum aesti... 40 0.43
gb|CA721227.1|CA721227 wdk9n.pk001.i1 wdk9n Triticum aestiv... 40 0.43
gb|CA730918.1|CA730918 wip1c.pk005.g12 wip1c Triticum aesti... 40 0.43
>gb|CA625432.1|CA625432 wl1n.pk0139.a12 wl1n Triticum aestivum cDNA clone wl1n.pk0139.a12
5' end, mRNA sequence
Length = 514
Score = 898 bits (453), Expect = 0.0
Identities = 502/515 (97%), Gaps = 3/515 (0%)
Strand = Plus / Minus
Query: 203 ctctttccaagtactagccatatgcttctttgtagttgtactttctttgtaaggtttatg 262
||||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 512 ctcttnccgagtattagccatatgcttctttgtagttgn-ctttctttgtaaggtttatg 454
Query: 263 aactctcttgaactccctgcatctgcagcaatttctgctgctcctcgtcgttctcttcct 322
| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 453 a-ctctcttgaactccttgcatctgcagca-tttctgctgctcctcgtcgttctcttcct 396
Query: 323 tcggctcaaccttgggcgccttcggtttcgtggtggattgctggtagagcacaccacctg 382
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 395 tcggctcaaccttgggtgccttcggtttcgtggtggattgctgatagagcacaccacctg 336
Query: 383 acatgcatatcaagagcccaatggtacccacaaaagaggcatgcttgtcccagataagca 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 acatgcatatcaagagcccaatggtacccacaaaagaggcatgcttgtcccagataagca 276
Query: 443 aattaatcacaacagttaggagcttgttaactatgccaagcactgtgaacccagtagcag 502
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 275 aattaatcacaacagttaggagcttgttcactatgccaagcactgtgaacccagtagcag 216
Query: 503 aaatagctcgtctgcaggagaatccgaagaaggatattgataatccaaacaggcatgaga 562
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 215 aaatagctcgtctgcaggagaatccgaagaaggatattgatagtccaaacaggcatgaga 156
Query: 563 gagcaacagggaggaccacatcaaatgaaagccagtttgacactttggagctgtcgacct 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gagcaacagggaggaccacatcaaatgaaagccagtttgacactttggagctgtcgacct 96
Query: 623 tcatctgatcaaattctcccattacgagaagctcgagtgggaatagcatcaaagcctcaa 682
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 95 tcatctgatcaaattctcccattactagaagctcgagtgggaatagcatcaaagcctcaa 36
Query: 683 ggttgttgtatagcacaaggccccatgtgttcagc 717
|||||||||||||||||||||||||||||||||||
Sbjct: 35 ggttgttgtatagcacaaggccccatgtgttcagc 1
>gb|BQ752794.1|BQ752794 WHE4119_C01_F01ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4119_C01_F01, mRNA sequence
Length = 777
Score = 615 bits (310), Expect = e-174
Identities = 642/752 (85%), Gaps = 3/752 (0%)
Strand = Plus / Minus
Query: 358 gattgctggtagagcacaccacctgacatgcatatcaagagcccaatggtacccacaaaa 417
|||||||||||||| |||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 761 gattgctggtagagaacaccaccagacatgcatatcaaaagcccaattgtccccacaagg 702
Query: 418 gaggcatgcttgtcccagataagcaaattaatcacaacagttaggagcttgttaactatg 477
|| |||||||||||||||||||||| ||| ||||| || || ||||||||||| |||||
Sbjct: 701 gacgcatgcttgtcccagataagcagattgatcacgacggtcaggagcttgttcactata 642
Query: 478 ccaagcactgtgaacccagtagcagaaatagctcgtctgcaggagaatccgaagaaggat 537
|| ||||| || || ||||||||||| || || ||||||||||| ||||| |||||||||
Sbjct: 641 ccgagcaccgtaaatccagtagcagagatggcccgtctgcaggaaaatccaaagaaggat 582
Query: 538 attgataatccaaacaggcatgagagagcaacagggaggaccacatcaaatgaaagccag 597
|| ||||| || ||||||||||| ||||||||||| |||||||| || || || ||||||
Sbjct: 581 atagataacccgaacaggcatgacagagcaacaggaaggaccacgtcgaacgatagccag 522
Query: 598 tttga---cactttggagctgtcgaccttcatctgatcaaattctcccattacgagaagc 654
|||| || ||||||||||| ||||||||||||| ||| |||||||||| || |||
Sbjct: 521 tttgttgtcatcttggagctgtccaccttcatctgattaaactctcccattataaggagc 462
Query: 655 tcgagtgggaatagcatcaaagcctcaaggttgttgtatagcacaaggccccatgtgttc 714
|| || || || | || || |||||||||||||||||| |||||||| ||||||||||||
Sbjct: 461 tcaaggggaaacaacagcagagcctcaaggttgttgtagagcacaagaccccatgtgttc 402
Query: 715 agcccaatggtcattacaacatgcttgatgtacacgaaatcaatggacatgcttgctagg 774
| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 401 aacccgatggtcatgacaacgtgcttgatgtacacgaaatcaatagacatgctcgctaga 342
Query: 775 taggccactgcccaggtgtaagcagtcacagtgaattggttgtctgtgaaaacatagatc 834
||||| | |||||| |||||||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 341 taggctatcgcccagctgtaagcagtcagggtgaactggttatcagtgaaaacatatatc 282
Query: 835 acacttccaccaagtattgtggagagtgaaagccatgtcttgagcgatggccatggctga 894
||||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||| ||
Sbjct: 281 acacttccaccaagtatagtggagagtgagagccatgtcttgaatgatgggcatggttgg 222
Query: 895 tgaagatacagcgtctctccgatcgcgacaaatataggcacagcagagcggaacacaatg 954
|| || || || ||||| || || || |||||||| ||||||||||| || ||||| |||
Sbjct: 221 tggaggtaaagtgtctccccaatggccacaaatatcggcacagcagaccgaaacacgatg 162
Query: 955 aaagtatccacatcggcatgaagcaggagttcactatttgtgaagatggagatgtagaac 1014
||||| ||||||| |||||| | |||||| || || ||||||||||| ||||||||||||
Sbjct: 161 aaagtgtccacattggcatgcatcaggagctcgctgtttgtgaagattgagatgtagaac 102
Query: 1015 atcacagcagcaggtaagaacttccacattgtcctcaagttaagtccatcgtgctcaatg 1074
|| ||||||||||||| |||||||||||| |||||||| || || | ||| |||||||
Sbjct: 101 ataacagcagcaggtaggaacttccacatggtcctcaaattcagcctatctggctcaata 42
Query: 1075 agcttgagctgtccacataggagaactccagc 1106
||||| ||||||||||| ||||||||||||||
Sbjct: 41 agctttagctgtccacacaggagaactccagc 10
>gb|CV777405.1|CV777405 FGAS071811 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 826
Score = 533 bits (269), Expect = e-149
Identities = 532/620 (85%)
Strand = Plus / Minus
Query: 609 ggagctgtcgaccttcatctgatcaaattctcccattacgagaagctcgagtgggaatag 668
||||||||| ||||||||||||| ||| |||||||||| || ||||| || || || |
Sbjct: 826 ggagctgtccaccttcatctgattaaactctcccattataaggagctcaaggggaaacaa 767
Query: 669 catcaaagcctcaaggttgttgtatagcacaaggccccatgtgttcagcccaatggtcat 728
|| || |||||||||||||| || |||||||| ||||||||||||| ||| ||||||||
Sbjct: 766 cagcagagcctcaaggttgtgntagagcacaagaccccatgtgttcaacccgatggtcat 707
Query: 729 tacaacatgcttgatgtacacgaaatcaatggacatgcttgctaggtaggccactgccca 788
||||| ||||||||||||||||||||||| |||||||| ||||| ||||| | |||||
Sbjct: 706 gacaacgtgcttgatgtacacgaaatcaatagacatgctcgctagataggctatcgccca 647
Query: 789 ggtgtaagcagtcacagtgaattggttgtctgtgaaaacatagatcacacttccaccaag 848
| |||||||||||| ||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 646 gctgtaagcagtcagggtgaactggttatcagtgaaaacatatatcacacttccaccaag 587
Query: 849 tattgtggagagtgaaagccatgtcttgagcgatggccatggctgatgaagatacagcgt 908
||| ||||||||||| ||||||||||||| ||||| ||||| || || || || || ||
Sbjct: 586 tatagtggagagtgagagccatgtcttgaatgatgggcatggttggtggaggtaaagtgt 527
Query: 909 ctctccgatcgcgacaaatataggcacagcagagcggaacacaatgaaagtatccacatc 968
||| || || || |||||||| ||||||||||| || ||||| |||||||| |||||||
Sbjct: 526 ctccccaatggccacaaatatcggcacagcagaccgaaacacgatgaaagtgtccacatt 467
Query: 969 ggcatgaagcaggagttcactatttgtgaagatggagatgtagaacatcacagcagcagg 1028
|||||| | |||||| || || ||||||||||| |||||||||||||| |||||||||||
Sbjct: 466 ggcatgcatcaggagctcgctgtttgtgaagattgagatgtagaacataacagcagcagg 407
Query: 1029 taagaacttccacattgtcctcaagttaagtccatcgtgctcaatgagcttgagctgtcc 1088
|| |||||||||||| |||||||| || || | ||| ||||||| ||||| ||||||||
Sbjct: 406 taggaacttccacatggtcctcaaattcagcctatctggctcaataagctttagctgtcc 347
Query: 1089 acataggagaactccagcaacactagtgaaatactgcagagctgtcagggctccaggata 1148
||| ||||||||||||||||||||||||| ||||| | ||||||||| |||||||| ||
Sbjct: 346 acacaggagaactccagcaacactagtgaggtactgtaaagctgtcagtgctccagggta 287
Query: 1149 tggaaatttcatgattgcccatttgttgatgatcgagagcagcgacgctgataaacaata 1208
||||| ||||||||||||||||||||||| || |||||||| || ||||| | ||||||
Sbjct: 286 gggaaacttcatgattgcccatttgttgataatggagagcagagatgctgacagacaata 227
Query: 1209 cccagcagccacaccataga 1228
|||||||||||||||||||
Sbjct: 226 accagcagccacaccataga 207
>gb|CV779185.1|CV779185 FGAS073594 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 830
Score = 470 bits (237), Expect = e-130
Identities = 518/609 (85%), Gaps = 2/609 (0%)
Strand = Plus / Minus
Query: 677 cctcaaggttgttgtatagcacaaggccccatgtgttcagccca-atggtcattacaaca 735
|||||||||||||||| |||||||| ||||||| ||||| ||| |||||||| || |
Sbjct: 759 cctcaaggttgttgtagagcacaagaccccatgggttcaaccccgatggtcatgacggcg 700
Query: 736 tgcttgatgtacacgaaatcaatggacatgcttgctaggtaggccactgcccaggtgtaa 795
||||||||||||||||||||||| |||||||| ||||| ||||| | ||||||| |||||
Sbjct: 699 tgcttgatgtacacgaaatcaatagacatgctcgctagataggctattgcccagctgtaa 640
Query: 796 gcagtcacagtgaattggttgtctgtgaaaacatagatcacacttccaccaagtattgtg 855
||||||| ||||| ||||| |||||||||||||| |||||||| ||||||||||| |||
Sbjct: 639 gcagtcagggtgaactggttatctgtgaaaacatatatcacactcccaccaagtatagtg 580
Query: 856 gagagtgaaagccatgtcttgagcgatggccatggctgatgaagatacagcgtctctccg 915
|| ||||| ||||||||||||| ||||| |||| || ||||| || || ||||| ||
Sbjct: 579 gaaagtgagagccatgtcttgaatgatgggcatgt-tggtgaaggtaaagtgtctcccca 521
Query: 916 atcgcgacaaatataggcacagcagagcggaacacaatgaaagtatccacatcggcatga 975
|| || |||||||| ||||||||||| || ||||| |||||||| ||||||| ||||||
Sbjct: 520 atggccacaaatatcggcacagcagaccgaaacacgatgaaagtgtccacattggcatgc 461
Query: 976 agcaggagttcactatttgtgaagatggagatgtagaacatcacagcagcaggtaagaac 1035
| |||||| || || ||||||||||| |||||||||||||| ||||||||||||| ||||
Sbjct: 460 atcaggagctcgctgtttgtgaagattgagatgtagaacataacagcagcaggtaggaac 401
Query: 1036 ttccacattgtcctcaagttaagtccatcgtgctcaatgagcttgagctgtccacatagg 1095
|||||||| |||||||| || || | ||| ||||||| ||||| ||||||||||| |||
Sbjct: 400 ttccacatggtcctcaaattcagcctatctggctcaataagctttagctgtccacacagg 341
Query: 1096 agaactccagcaacactagtgaaatactgcagagctgtcagggctccaggatatggaaat 1155
|||||||||||||||||||||| ||||| | |||||||| |||||||| || |||||
Sbjct: 340 agaactccagcaacactagtgaggtactgtaaggctgtcagtgctccagggtagggaaac 281
Query: 1156 ttcatgattgcccatttgttgatgatcgagagcagcgacgctgataaacaatacccagca 1215
||||||||||||||||||||||| || |||||||| || ||||| | ||||| ||||||
Sbjct: 280 ttcatgattgcccatttgttgataatggagagcagagatgctgacaggcaataaccagca 221
Query: 1216 gccacaccatagattgaggcttgctgcataagagtgttcaacatgttactccaggctcca 1275
||||||||||||| ||| || || ||||||||||| || | ||||| |||| ||||||
Sbjct: 220 gccacaccatagactgaagcgtggcgcataagagtgctccatgtgttattccaagctcca 161
Query: 1276 gttctctcg 1284
||| |||||
Sbjct: 160 gttttctcg 152
>gb|CK156979.1|CK156979 FGAS038038 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 880
Score = 428 bits (216), Expect = e-118
Identities = 502/596 (84%), Gaps = 5/596 (0%)
Strand = Plus / Plus
Query: 283 atctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgcc 342
||||||||||| |||||| ||| || |||| ||||||||| ||||| | ||||||| ||
Sbjct: 150 atctgcagcaaattctgcccctcttcatcgtcctcttcctttggctcgatcttgggcacc 209
Query: 343 ttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagagccca 402
|| || || |||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 210 ttgggctttgtggccgattgctggtagagaacaccaccagacatgcatatcaaaagccca 269
Query: 403 atggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagttagg 462
|| || ||||||| || |||||||||||||||||||||| ||| ||||| || || |||
Sbjct: 270 attgtccccacaagggacgcatgcttgtcccagataagcagattgatcacgacggtcagg 329
Query: 463 agcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgcaggag 522
|||||||| ||||| || ||||| || || ||||||||||| || || |||||||||||
Sbjct: 330 agcttgttcactataccgagcaccgtaaatccagtagcagagatggcccgtctgcaggaa 389
Query: 523 aatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggaccaca 582
||||| ||||||||||| ||||| || ||||||||||| ||||||||||| ||||||||
Sbjct: 390 aatccaaagaaggatatagataacccgaacaggcatgacagagcaacaggaaggaccacg 449
Query: 583 tcaaatgaaagccagtttga---cactttggagctgtcgaccttcatctgatcaaattct 639
|| || || |||||||||| || ||||||||||| ||||||||||||| ||| |||
Sbjct: 450 tcgaacgatagccagtttgttgtcatcttggagctgtccaccttcatctgattaaactct 509
Query: 640 cccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcaca 699
||||||| || ||||| || || || | || || |||||||| ||||||||| || |
Sbjct: 510 cccattataaggagctcaaggggaaacaacagcagagcctcaatgttgttgtagagga-- 567
Query: 700 aggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaatg 759
|| ||||||||||||| ||| |||||||| ||||| ||||||||||||||||||| ||
Sbjct: 568 agaccccatgtgttcaacccgatggtcatgacaacgtgcttgatgtacacgaaatncata 627
Query: 760 gacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtct 819
|||||||| ||||| ||||| | |||||| |||||||||||| ||||| ||||| ||
Sbjct: 628 gacatgctcgctagataggctatcgcccagctgtaagcagtcagggtgaactggttatca 687
Query: 820 gtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtctt 875
||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 688 gtgaaaacatatatcacacttccaccaagtatagtggagagtgagagccatgtctt 743
>gb|CV759641.1|CV759641 FGAS054025 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 828
Score = 422 bits (213), Expect = e-116
Identities = 473/559 (84%), Gaps = 3/559 (0%)
Strand = Plus / Minus
Query: 283 atctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgcc 342
||||||||||| |||||| ||| || |||| ||||||||| ||||| | ||||||| ||
Sbjct: 665 atctgcagcaaattctgcccctcttcatcgtcctcttcctttggctcgatcttgggcacc 606
Query: 343 ttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagagccca 402
|| || || |||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 605 ttgggctttgtggccgattgctggtagagaacaccaccagacatgcatatcaaaagccca 546
Query: 403 atggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagttagg 462
|| || ||||||| || |||||||||||||||||||||| ||| ||||| || || |||
Sbjct: 545 attgtccccacaagggacgcatgcttgtcccagataagcagattgatcacgacggtcagg 486
Query: 463 agcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgcaggag 522
|||||||| ||||| || ||||| || || ||||||||||| || || |||||||||||
Sbjct: 485 agcttgttcactataccgagcaccgtaaatccagtagcagagatggcccgtctgcaggaa 426
Query: 523 aatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggaccaca 582
||||| ||||||||||| ||||| || ||||||||||| ||||||||||| ||||||||
Sbjct: 425 aatccaaagaaggatatagataacccgaacaggcatgacagagcaacaggaaggaccacg 366
Query: 583 tcaaatgaaagccagtttga---cactttggagctgtcgaccttcatctgatcaaattct 639
|| || || |||||||||| || ||||||||||| ||||||||||||| ||| |||
Sbjct: 365 tcgaacgatagccagtttgttgtcatcttggagctgtccaccttcatctgattaaactct 306
Query: 640 cccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcaca 699
||||||| || ||||| || || || | || || |||||||||||||||||| ||||||
Sbjct: 305 cccattataaggagctcaaggggaaacaacagcagagcctcaaggttgttgtagagcaca 246
Query: 700 aggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaatg 759
|| ||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 245 agaccccatgtgttcaacccgatggtcatgacaacgtgcttgatgtacacgaaatcaata 186
Query: 760 gacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtct 819
|||||||| ||||| ||||| | |||||| |||||||||||| ||||| ||||| ||
Sbjct: 185 gacatgctcgctagataggctatcgcccagctgtaagcagtcagggtgaactggttatca 126
Query: 820 gtgaaaacatagatcacac 838
||||||||||| |||||||
Sbjct: 125 gtgaaaacatatatcacac 107
>gb|CD883726.1|CD883726 F1.114D21F010503 F1 Triticum aestivum cDNA clone F1114D21, mRNA
sequence
Length = 716
Score = 398 bits (201), Expect = e-109
Identities = 456/539 (84%), Gaps = 4/539 (0%)
Strand = Plus / Minus
Query: 285 ctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgcctt 344
||||||||| |||||| ||| || |||| ||||||||| ||||| | ||||||| ||||
Sbjct: 538 ctgcagcaaattctgcccctcttcatcgtcctcttcctttggctcgatcttgggcacctt 479
Query: 345 cggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagagcccaat 404
|| || ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 478 gggctttgtggtcgattgctggtagaggacaccaccagacatgcatatcaagagccccat 419
Query: 405 ggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagttaggag 464
|| ||||||| || |||||||||||||||||||||| ||| ||||| || || |||||
Sbjct: 418 tgtccccacaagggacgcatgcttgtcccagataagcagattgatcacgacggtcaggag 359
Query: 465 cttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgcaggagaa 524
|||||| ||||| || ||||| || || ||||||||||| || || ||||||||||||||
Sbjct: 358 cttgttcactataccgagcaccgtaaatccagtagcagagatggcccgtctgcaggagaa 299
Query: 525 tccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggaccacatc 584
||| ||||||||||||||||| || ||||||||||| ||||||||||| |||||||| ||
Sbjct: 298 tcccaagaaggatattgataacccgaacaggcatgacagagcaacaggaaggaccacgtc 239
Query: 585 aaatgaaagccagtttga---cactttggagctgtcgaccttcatctgatcaaattctcc 641
|| || |||||||||| || ||||||||||| ||||||||||||| ||| |||||
Sbjct: 238 gaacgatagccagtttgttgtcatcttggagctgtccaccttcatctgattaaactctcc 179
Query: 642 cattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcacaag 701
||||| || ||||| || ||||| | | || |||||||||||||||||| ||||||||
Sbjct: 178 cattataaggagctcaagggggaacaagagcagagcctcaaggttgttgtagagcacaag 119
Query: 702 gccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaatgga 761
|||||||||||||| ||| |||||||| || || || |||||||||||||| ||||| ||
Sbjct: 118 gccccatgtgttcaacccgatggtcatgacgacgtgtttgatgtacacgaagtcaataga 59
Query: 762 catgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtctg 820
|||||| ||||| ||||| | ||||||| ||||| |||||| ||||| ||||| ||||
Sbjct: 58 catgctcgctagataggctattgcccagctgtaa-cagtcagggtgaactggttatctg 1
>gb|AL826415.1|AL826415 AL826415 p:537 Triticum aestivum cDNA clone H06_p537_plate_1, mRNA
sequence
Length = 528
Score = 391 bits (197), Expect = e-106
Identities = 433/506 (85%), Gaps = 8/506 (1%)
Strand = Plus / Minus
Query: 375 accacctgacatgcatatcaagagcccaatggtacccacaaaagaggcatgcttgtccca 434
|||||| ||||||||||||||||||||||| || ||||||| || ||||||||||||||
Sbjct: 528 accaccagacatgcatatcaagagcccaattgtccccacaagggacgcatgcttgtccca 469
Query: 435 gataagcaaattaatcacaacagttaggagcttgttaactatgccaagcactgtgaaccc 494
|||||||| ||| ||||| || || ||||||||||| ||||| || ||||| || || ||
Sbjct: 468 gataagcagattgatcacgacggtcaggagcttgttcactataccgagcaccgtaaatcc 409
Query: 495 agtagcagaaatagctcgtctgcaggagaatccgaagaaggatattgataatccaaacag 554
||||||||| || || ||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 408 agtagcagagatggcccgtctgcaggagaatccaaagaaggatattgataacccgaacag 349
Query: 555 gcatgagagagcaacagggaggaccacatcaaatgaaagccagtttga---cactttgga 611
|||||| ||||||||||| |||||||| || || || |||||||||| || |||||
Sbjct: 348 gcatgacagagcaacaggaaggaccacgtcgaacgatagccagtttgttgtcatcttgga 289
Query: 612 gctgtcgaccttcatctgatcaaattctcccattacgagaagctcgagtgggaatagcat 671
|||||| ||||||||||||| ||| |||||||||| || ||||| || ||||| | |
Sbjct: 288 gctgtccaccttcatctgattaaactctcccattataaggagctcaagggggaacaagag 229
Query: 672 caaagcctcaaggttgttgtatagcacaaggccccatgtgttcagcccaatggtcattac 731
|| |||||||||||||||||| |||||||||||||||||||||| ||| |||||||| ||
Sbjct: 228 cagagcctcaaggttgttgtagagcacaaggccccatgtgttcaacccgatggtcatgac 169
Query: 732 aacatgcttgatgtacacgaaatcaatggacatgcttgctaggtaggccactgcccaggt 791
|| || |||||||||||||| ||||| |||||||| ||||| ||||| | ||||||| |
Sbjct: 168 gacgtgtttgatgtacacgaagtcaatagacatgctcgctagataggctattgcccagct 109
Query: 792 gtaagcagtcacagtgaattggttgtctgtgaaaacatagatcacacttccaccaagtat 851
||||||||||| ||||| ||| | |||||| ||||||| |||||||||||||||||||
Sbjct: 108 gtaagcagtcagggtgaactgg-tatctgtg-aaacatatatcacacttccaccaagta- 52
Query: 852 tgtggagagtgaaagccatgtcttga 877
||||| ||||| |||||||||||||
Sbjct: 51 -gtgga-agtgagagccatgtcttga 28
>gb|CK205892.1|CK205892 FGAS017447 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1115
Score = 383 bits (193), Expect = e-104
Identities = 405/475 (85%), Gaps = 3/475 (0%)
Strand = Plus / Plus
Query: 283 atctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgcc 342
||||||||||| |||||| ||| || |||| ||||||||| ||||| | ||||||| ||
Sbjct: 336 atctgcagcaaattctgcccctcttcatcgtcctcttcctttggctcgatcttgggcacc 395
Query: 343 ttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagagccca 402
|| || || ||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 396 ttgggctttgtggtcgattgctggtagagaacaccaccagacatgcatatcaagagccca 455
Query: 403 atggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagttagg 462
|| || ||||||| || |||||||||||||||||||||| ||| ||||| || || |||
Sbjct: 456 attgtccccacaagggacgcatgcttgtcccagataagcagattgatcacgacggtcagg 515
Query: 463 agcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgcaggag 522
|||||||| ||||| || ||||| || || ||||||||||| || || ||||||||||||
Sbjct: 516 agcttgttcactataccgagcaccgtaaatccagtagcagagatggcccgtctgcaggag 575
Query: 523 aatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggaccaca 582
||||| ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 576 aatccaaagaaggatatagataacccaaacaggcatgacagagcaacaggaaggaccacg 635
Query: 583 tcaaatgaaagccagtttga---cactttggagctgtcgaccttcatctgatcaaattct 639
|| || || |||||||||| || ||||||||||||||||||||||||| ||| |||
Sbjct: 636 tcgaacgatagccagtttgttgtcatcttggagctgtcgaccttcatctgattaaactct 695
Query: 640 cccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcaca 699
||||||| || ||||| || ||||| | || || |||||| ||||||||||| ||||||
Sbjct: 696 cccattataaggagctcaagggggaacaacaacagagcctccaggttgttgtagagcaca 755
Query: 700 aggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaat 754
| ||||||||||||| ||| |||||||| || || |||||||||||||||||||
Sbjct: 756 ggaccccatgtgttcaacccgatggtcatgacgacgtgcttgatgtacacgaaat 810
>gb|BJ292532.1|BJ292532 BJ292532 Y. Ogihara unpublished cDNA library, Wh_SL Triticum aestivum
cDNA clone whsl28c10 5', mRNA sequence
Length = 619
Score = 319 bits (161), Expect = 3e-085
Identities = 308/357 (86%)
Strand = Plus / Minus
Query: 922 acaaatataggcacagcagagcggaacacaatgaaagtatccacatcggcatgaagcagg 981
|||||||| |||||||||||||| |||||||||||||| ||||||| |||||| |||| |
Sbjct: 617 acaaatattggcacagcagagcgaaacacaatgaaagtgtccacattggcatgcagcaag 558
Query: 982 agttcactatttgtgaagatggagatgtagaacatcacagcagcaggtaagaacttccac 1041
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agttcgctgtttgtgaagatggagatgtagaacatcacagcagcaggtaagaacttccac 498
Query: 1042 attgtcctcaagttaagtccatcgtgctcaatgagcttgagctgtccacataggagaact 1101
|| || || ||||| ||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 497 atggttgcgaaattaaggccatcatgctcaataagctttgcttgtccacataggagaact 438
Query: 1102 ccagcaacactagtgaaatactgcagagctgtcagggctccaggatatggaaatttcatg 1161
||| ||||||| || || ||||| ||||||||||| || ||||| || ||||||||||||
Sbjct: 437 ccaacaacactggtcaagtactgtagagctgtcagtgccccagggtacggaaatttcatg 378
Query: 1162 attgcccatttgttgatgatcgagagcagcgacgctgataaacaatacccagcagccaca 1221
||||||||||||||||| || ||||||| || ||||| | ||||| ||||||||||
Sbjct: 377 attgcccatttgttgataatggagagcaaagatgctgacaggcaataaccagcagccaag 318
Query: 1222 ccatagattgaggcttgctgcataagagtgttcaacatgttactccaggctccagtt 1278
||||| | ||| |||||||| | ||||||| |||| ||| |||||||||||||||||
Sbjct: 317 ccatacactgaagcttgctggacaagagtgctcaatatgctactccaggctccagtt 261
>gb|CA603953.1|CA603953 wr1.pk0034.h5 wr1 Triticum aestivum cDNA clone wr1.pk0034.h5 5' end,
mRNA sequence
Length = 406
Score = 268 bits (135), Expect = 1e-069
Identities = 270/315 (85%)
Strand = Plus / Minus
Query: 702 gccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaatgga 761
|||||||||||||| ||| |||||||| || || || |||||||||||||| ||||| ||
Sbjct: 318 gccccatgtgttcaacccgatggtcatgacgacgtgtttgatgtacacgaagtcaataga 259
Query: 762 catgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtctgt 821
|||||| ||||| ||||| | ||||||| |||||||||||| ||||| ||||| |||||
Sbjct: 258 catgctcgctagataggctattgcccagctgtaagcagtcagggtgaactggttatctgt 199
Query: 822 gaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgagcga 881
||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||| ||
Sbjct: 198 gaaaacatatatcacacttccaccaagtatagtggaaagtgagagccatgtcttgaatga 139
Query: 882 tggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagcaga 941
||| ||||| || ||||| || || ||||| || || || |||||||| |||||||||||
Sbjct: 138 tgggcatggttggtgaaggtaaagtgtctccccaatggccacaaatatcggcacagcaga 79
Query: 942 gcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaagat 1001
|| ||||| |||||||| ||||||| |||||| | |||||| || || |||||||||||
Sbjct: 78 ccgaaacacgatgaaagtgtccacattggcatgcatcaggagctcgctgtttgtgaagat 19
Query: 1002 ggagatgtagaacat 1016
||||||||||||||
Sbjct: 18 tgagatgtagaacat 4
>gb|DR733560.1|DR733560 FGAS079318 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 821
Score = 232 bits (117), Expect = 6e-059
Identities = 363/445 (81%)
Strand = Plus / Minus
Query: 784 gcccaggtgtaagcagtcacagtgaattggttgtctgtgaaaacatagatcacacttcca 843
|||||| |||||||||||| ||||| ||||| || |||||| |||| ||||| || ||
Sbjct: 806 gcccagctgtaagcagtcagggtgaactggttatcagtgaaagcatatatcaccctcccc 747
Query: 844 ccaagtattgtggagagtgaaagccatgtcttgagcgatggccatggctgatgaagatac 903
||||||| ||| ||||| |||||| || ||| ||||| ||| | || || || ||
Sbjct: 746 ccaagtacagtgagaagtgagagccatctcctgaatgatgggcatagttggtggaggtaa 687
Query: 904 agcgtctctccgatcgcgacaaatataggcacagcagagcggaacacaatgaaagtatcc 963
|| ||||| || || || |||||||| |||||||||| || ||||| | |||||| |||
Sbjct: 686 agtgtctcgccaatggccacaaatatcggcacagcagtccgaaacacgacgaaagtgtcc 627
Query: 964 acatcggcatgaagcaggagttcactatttgtgaagatggagatgtagaacatcacagca 1023
|||| |||||| | |||||| || || ||||||||||| |||||||||||||| ||||||
Sbjct: 626 acattggcatgcatcaggagctcgctgtttgtgaagattgagatgtagaacataacagca 567
Query: 1024 gcaggtaagaacttccacattgtcctcaagttaagtccatcgtgctcaatgagcttgagc 1083
||||||| |||||||||||| ||| |||| || || | || ||||||| ||||| ||
Sbjct: 566 gcaggtaggaacttccacatggtcgtcaaattcagcctatgtggctcaataagctttagg 507
Query: 1084 tgtccacataggagaactccagcaacactagtgaaatactgcagagctgtcagggctcca 1143
|||||||| ||||||| ||||||||| ||||||| || || | ||||||||| ||||||
Sbjct: 506 tgtccacacaggagaagtccagcaacgctagtgaggtagtgtaaagctgtcagtgctcca 447
Query: 1144 ggatatggaaatttcatgattgcccatttgttgatgatcgagagcagcgacgctgataaa 1203
|| || ||||| |||| |||||||||||||||||| || |||||||| || || || | |
Sbjct: 446 gggtagggaaagttcaagattgcccatttgttgataatggagagcagagatgccgacaga 387
Query: 1204 caatacccagcagccacaccataga 1228
||||| |||||||||||||||||||
Sbjct: 386 caataaccagcagccacaccataga 362
>gb|CK215073.1|CK215073 FGAS027021 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 744
Score = 220 bits (111), Expect = 2e-055
Identities = 237/279 (84%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||| ||||| | |||||| || ||||||||||||||||||| || ||
Sbjct: 426 ctgcatctcaagcaacttctgttcctcctcatcattctcttccttcggctcaaaatttgg 485
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| || || ||||||||||||||||| || |||||||| |||||||| ||||| ||
Sbjct: 486 tgccttgggctttgtggtggattgctggtacagaacaccaccagacatgcagatcaacag 545
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || ||||||| || | |||||||||||||||||||| ||||||||| |||||
Sbjct: 546 cccaattgttcccacaagggatgaatgcttgtcccagataagcagattaatcacgacagt 605
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| ||||| || || || |||||||| || ||||| ||||||||
Sbjct: 606 gaggagcttgtttactataccaaggaccgtaaatccagtagctgagatagcccgtctgca 665
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggca 557
|||||| || ||||||||||||| ||| ||||| |||||
Sbjct: 666 ggagaacccaaagaaggatattgctaacccaaaaaggca 704
>gb|CD934158.1|CD934158 GR45.123D07F010723 GR45 Triticum aestivum cDNA clone GR45123D07, mRNA
sequence
Length = 583
Score = 212 bits (107), Expect = 5e-053
Identities = 253/299 (84%), Gaps = 2/299 (0%)
Strand = Plus / Minus
Query: 981 gagttcactatttgtgaagatggagatgtagaacatcacagcagcaggtaagaacttcca 1040
|||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 545 gagttcgctgtttgtgaagatggagatgtaga-catcacagcagcaggtaagaacttcca 487
Query: 1041 cattgtcctc-aagttaagtccatcgtgctcaatgagcttgagctgtccacataggagaa 1099
||| | | || ||||| ||||| |||||||| ||||| ||||||||||||||||
Sbjct: 486 catgggttgcgaaattaaggccatcatgctcaataagctttgcttgtccacataggagaa 427
Query: 1100 ctccagcaacactagtgaaatactgcagagctgtcagggctccaggatatggaaatttca 1159
||||| ||||||| || || ||||| ||||||||||| || ||||| || ||||| ||||
Sbjct: 426 ctccaacaacactggtcaagtactgtagagctgtcagtgccccagggtacggaaacttca 367
Query: 1160 tgattgcccatttgttgatgatcgagagcagcgacgctgataaacaatacccagcagcca 1219
||||||||||||||||||| || ||||||| || ||||| | ||||| ||||||||||
Sbjct: 366 tgattgcccatttgttgataatggagagcaaagatgctgacaggcaataaccagcagcca 307
Query: 1220 caccatagattgaggcttgctgcataagagtgttcaacatgttactccaggctccagtt 1278
||||| | ||| |||||||| | ||||||| |||| ||| |||||||||||||||||
Sbjct: 306 agccatacactgaagcttgctggacaagagtgctcaatatgctactccaggctccagtt 248
>gb|BJ298989.1|BJ298989 BJ298989 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl28c10 3', mRNA sequence
Length = 674
Score = 192 bits (97), Expect = 5e-047
Identities = 208/245 (84%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||| ||||| | |||||| || |||||||||||||||||||| || ||
Sbjct: 430 ctgcatctcaagcaacttctgttcctcctcatcattctcttccttcggctcaacatttgg 489
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
|| || || || ||||||||||||||||| || |||||||| |||||||| ||||| ||
Sbjct: 490 tgcattgggctttgtggtggattgctggtacagaacaccaccagacatgcagatcaacag 549
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || ||||||| || | |||||||||||||||||||| ||||||||| |||||
Sbjct: 550 cccaattgttcccacaagggatgaatgcttgtcccagataagcagattaatcacgacagt 609
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| ||||| || || || |||||||| || ||||| ||||||||
Sbjct: 610 gaggagcttgtttactataccaaggaccgtaaatccagtagctgagatagcccgtctgca 669
Query: 519 ggaga 523
|||||
Sbjct: 670 ggaga 674
>gb|CK195665.1|CK195665 FGAS004107 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 167 bits (84), Expect = 3e-039
Identities = 165/192 (85%)
Strand = Plus / Plus
Query: 285 ctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgcctt 344
||||||||| |||||| ||| || |||| ||||||||| ||||| | ||||||| ||||
Sbjct: 455 ctgcagcaaattctgcccctcttcatcgtcctcttcctttggctcgatcttgggcacctt 514
Query: 345 cggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagagcccaat 404
|| || ||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 515 gggctttgtggtcgattgctggtagagaacaccaccagacatgcatatcaagagcccaat 574
Query: 405 ggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagttaggag 464
|| ||||||| || |||||||||||||||||||||| ||| ||||| || || |||||
Sbjct: 575 tgtccccacaagggacgcatgcttgtcccagataagcagattgatcacgacggtcaggag 634
Query: 465 cttgttaactat 476
|||||| |||||
Sbjct: 635 cttgttcactat 646
Score = 87.7 bits (44), Expect = 2e-015
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 511 cgtctgcaggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaaca 570
||||||||||||||||| ||||||||||||||||| || ||||||||||| |||| |||
Sbjct: 684 cgtctgcaggagaatccaaagaaggatattgataacccgaacaggcatgacagagncaca 743
Query: 571 gggaggaccacatcaaatgaaagccagtttg 601
|| ||||||| || || || ||||||||||
Sbjct: 744 ggagggaccacgtcgaacgatagccagtttg 774
>gb|CD934159.1|CD934159 GR45.123D07R010830 GR45 Triticum aestivum cDNA clone GR45123D07,
mRNA sequence
Length = 579
Score = 159 bits (80), Expect = 7e-037
Identities = 155/180 (86%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||| ||||| | |||||| || |||||||||||||||||||| |||||
Sbjct: 396 ctgcatctcaagcaacttctgttcctcctcatcattctcttccttcggctcaacattggg 455
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| || || | ||||||||||||||| || |||||||| |||||||| ||||| ||
Sbjct: 456 tgccttaggcttgggggtggattgctggtacagaacaccaccagacatgcagatcaacag 515
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
||||||||| ||||||| || | |||||||||||||||||||| ||||||||| |||||
Sbjct: 516 cccaatggttcccacaagggatgaatgcttgtcccagataagcagattaatcacgacagt 575
>gb|CA683516.1|CA683516 wlm96.pk0018.h11 wlm96 Triticum aestivum cDNA clone
wlm96.pk0018.h11 5' end, mRNA sequence
Length = 459
Score = 145 bits (73), Expect = 1e-032
Identities = 138/160 (86%)
Strand = Plus / Plus
Query: 283 atctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgcc 342
||||||||||| |||||| ||| || |||| ||||||||| ||||| | ||||||| ||
Sbjct: 284 atctgcagcaaattctgcccctcttcatcgtcctcttcctttggctcgatcttgggcacc 343
Query: 343 ttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagagccca 402
|| || || ||||| |||||||||||||| ||| |||| |||||||||||||||||||||
Sbjct: 344 ttgggctttgtggtcgattgctggtagagaacancaccagacatgcatatcaagagccca 403
Query: 403 atggtacccacaaaagaggcatgcttgtcccagataagca 442
|| || ||||||| || ||||||||||||||||||||||
Sbjct: 404 attgtccccacaagggacgcatgcttgtcccagataagca 443
>gb|BJ292530.1|BJ292530 BJ292530 Y. Ogihara unpublished cDNA library, Wh_SL Triticum aestivum
cDNA clone whsl28c08 5', mRNA sequence
Length = 362
Score = 119 bits (60), Expect = 6e-025
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 1127 gagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgatgatcgaga 1186
|||||||||| || ||||| || ||||||||||||||||||||||||||||| || ||||
Sbjct: 362 gagctgtcagtgccccagggtacggaaatttcatgattgcccatttgttgataatggaga 303
Query: 1187 gcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttgctgcataa 1246
||| || ||||| | ||||| |||||||||| ||||| | ||| |||||||| | ||
Sbjct: 302 gcaaagatgctgacaggcaataaccagcagccaagccatacactgaagcttgctggacaa 243
Query: 1247 gagtgttcaacatgttactccaggctccagtt 1278
||||| |||| ||| |||||||||||||||||
Sbjct: 242 gagtgctcaatatgctactccaggctccagtt 211
>gb|AJ611086.1|AJ611086 AJ611086 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04282R, mRNA
sequence
Length = 538
Score = 105 bits (53), Expect = 9e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||| ||||| | |||||| || ||||||||||||||||||| || ||
Sbjct: 141 ctgcatctcaagcaacttctgttcctcctcatcattctcttccttcggctcaaaatttgg 82
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| || || ||||||||||||||||| || |||||||| |||||||| ||||| ||
Sbjct: 81 tgccttgggctttgtggtggattgctggtacagaacaccaccagacatgcagatcaacag 22
Query: 399 cccaatggtacccacaa 415
|||||| || |||||||
Sbjct: 21 cccaattgttcccacaa 5
>gb|CA693320.1|CA693320 wlm96.pk061.j3 wlm96 Triticum aestivum cDNA clone wlm96.pk061.j3 5'
end, mRNA sequence
Length = 403
Score = 85.7 bits (43), Expect = 8e-015
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 283 atctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgcc 342
||||||||||| |||||| ||| || |||| ||||||||| ||||| | ||||||| ||
Sbjct: 111 atctgcagcaaattctgcccctcttcatcgtcctcttcctttggctcgatcttgggcacc 52
Query: 343 ttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatc 393
|| || || |||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 51 ttgggctttgtggccgattgctggtagagaacaccaccagacatgcatatc 1
>gb|BJ298987.1|BJ298987 BJ298987 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl28c08 3', mRNA sequence
Length = 375
Score = 67.9 bits (34), Expect = 2e-009
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||| ||||| | |||||| || |||||||||||||||||||| || ||
Sbjct: 284 ctgcatctcaagcaacttctgttcctcctcatcattctcttccttcggctcaacatttgg 343
Query: 339 cgccttcggtttcgtggtggattgctggta 368
|| || || || |||||||||||||||||
Sbjct: 344 tgcattgggctttgtggtggattgctggta 373
>gb|CA639812.1|CA639812 wre1n.pk0027.d10 wre1n Triticum aestivum cDNA clone
wre1n.pk0027.d10 5' end, mRNA sequence
Length = 572
Score = 65.9 bits (33), Expect = 7e-009
Identities = 97/116 (83%), Gaps = 2/116 (1%)
Strand = Plus / Plus
Query: 285 ctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgcctt 344
||||||||| |||||| ||| || |||| ||||||||| |||||| | |||||| ||||
Sbjct: 285 ctgcagcaaattctgcccctcttcatcgtcctcttcctttggctcatc-ttgggcacctt 343
Query: 345 cggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagagcc 400
|| || ||||| || ||||||||||| ||| |||| ||||||||||||| |||||
Sbjct: 344 gggctttgtggtcgantgctggtagagaaca-caccagacatgcatatcatgagcc 398
>gb|CA690856.1|CA690856 wlm96.pk050.e9 wlm96 Triticum aestivum cDNA clone wlm96.pk050.e9 5'
end, mRNA sequence
Length = 492
Score = 46.1 bits (23), Expect = 0.007
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1203 acaatacccagcagccacaccataga 1228
|||||| |||||||||||||||||||
Sbjct: 294 acaatanccagcagccacaccataga 269
>gb|CA700577.1|CA700577 wkm1c.pk005.p12 wkm1c Triticum aestivum cDNA clone wkm1c.pk005.p12 5'
end, mRNA sequence
Length = 506
Score = 40.1 bits (20), Expect = 0.43
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1444 tgttctctgcgcggtggtcg 1463
||||||||||||||||||||
Sbjct: 68 tgttctctgcgcggtggtcg 49
>gb|CA721227.1|CA721227 wdk9n.pk001.i1 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.i1 5'
end, mRNA sequence
Length = 505
Score = 40.1 bits (20), Expect = 0.43
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1444 tgttctctgcgcggtggtcg 1463
||||||||||||||||||||
Sbjct: 59 tgttctctgcgcggtggtcg 40
>gb|CA730918.1|CA730918 wip1c.pk005.g12 wip1c Triticum aestivum cDNA clone wip1c.pk005.g12 5'
end, mRNA sequence
Length = 629
Score = 40.1 bits (20), Expect = 0.43
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1444 tgttctctgcgcggtggtcg 1463
||||||||||||||||||||
Sbjct: 69 tgttctctgcgcggtggtcg 50
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 285,001
Number of Sequences: 636343
Number of extensions: 285001
Number of successful extensions: 78229
Number of sequences better than 0.5: 27
Number of HSP's better than 0.5 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78166
Number of HSP's gapped (non-prelim): 45
length of query: 1484
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1464
effective length of database: 354,513,379
effective search space: 519007586856
effective search space used: 519007586856
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)