BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4005867.2.1
(1967 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ245820.1|BJ245820 BJ245820 Y. Ogihara unpublished cDNA... 860 0.0
gb|BJ243936.1|BJ243936 BJ243936 Y. Ogihara unpublished cDNA... 805 0.0
gb|BJ250225.1|BJ250225 BJ250225 Y. Ogihara unpublished cDNA... 531 e-149
gb|BJ285920.1|BJ285920 BJ285920 Y. Ogihara unpublished cDNA... 515 e-144
gb|BJ251714.1|BJ251714 BJ251714 Y. Ogihara unpublished cDNA... 474 e-131
gb|BJ251252.1|BJ251252 BJ251252 Y. Ogihara unpublished cDNA... 436 e-120
gb|BJ244140.1|BJ244140 BJ244140 Y. Ogihara unpublished cDNA... 422 e-116
gb|BJ251281.1|BJ251281 BJ251281 Y. Ogihara unpublished cDNA... 375 e-102
gb|BJ249930.1|BJ249930 BJ249930 Y. Ogihara unpublished cDNA... 365 8e-099
gb|BJ244416.1|BJ244416 BJ244416 Y. Ogihara unpublished cDNA... 353 3e-095
gb|BJ245399.1|BJ245399 BJ245399 Y. Ogihara unpublished cDNA... 339 4e-091
gb|BJ245374.1|BJ245374 BJ245374 Y. Ogihara unpublished cDNA... 246 5e-063
gb|BF484702.1|BF484702 WHE2318_F12_K24ZS Wheat pre-anthesis... 228 1e-057
gb|BJ249211.1|BJ249211 BJ249211 Y. Ogihara unpublished cDNA... 202 7e-050
gb|BJ255470.1|BJ255470 BJ255470 Y. Ogihara unpublished cDNA... 163 6e-038
gb|CA593973.1|CA593973 wpa1c.pk004.c19 wpa1c Triticum aesti... 149 9e-034
gb|BJ248171.1|BJ248171 BJ248171 Y. Ogihara unpublished cDNA... 141 2e-031
gb|BJ248423.1|BJ248423 BJ248423 Y. Ogihara unpublished cDNA... 115 1e-023
gb|BJ254306.1|BJ254306 BJ254306 Y. Ogihara unpublished cDNA... 88 3e-015
gb|BJ254574.1|BJ254574 BJ254574 Y. Ogihara unpublished cDNA... 88 3e-015
emb|AX660733.1| Sequence 1090 from Patent WO03000906 86 1e-014
gb|BE606718.1|BE606718 WHE0907_G06_N11ZS Wheat 5-15 DAP spi... 82 2e-013
gb|AL808409.1|AL808409 AL808409 a:22 Triticum aestivum cDNA... 82 2e-013
gb|BJ250058.1|BJ250058 BJ250058 Y. Ogihara unpublished cDNA... 72 2e-010
gb|CK162455.1|CK162455 FGAS015049 Triticum aestivum FGAS: L... 72 2e-010
gb|BJ250042.1|BJ250042 BJ250042 Y. Ogihara unpublished cDNA... 70 6e-010
gb|BJ252439.1|BJ252439 BJ252439 Y. Ogihara unpublished cDNA... 70 6e-010
gb|CK210460.1|CK210460 FGAS022276 Triticum aestivum FGAS: L... 62 2e-007
gb|BE425995.1|BE425995 WHE0326_A09_A18ZS Wheat unstressed s... 60 6e-007
gb|CA628044.1|CA628044 wle1.pk0001.d7 wle1 Triticum aestivu... 60 6e-007
gb|CA604573.1|CA604573 wr1.pk0041.c12 wr1 Triticum aestivum... 56 1e-005
gb|CA721383.1|CA721383 wdk9n.pk001.p9 wdk9n Triticum aestiv... 54 4e-005
gb|CB307163.1|CB307163 HFIG148 Hessian fly infested cDNA li... 54 4e-005
gb|BE442559.1|BE442559 WHE1103_D06_H11ZS Wheat etiolated se... 52 1e-004
gb|AL822121.1|AL822121 AL822121 p:234 Triticum aestivum cDN... 52 1e-004
gb|CD452428.1|CD452428 WHE1103_D06_H11ZT CS wheat etiolated... 52 1e-004
gb|CD878081.1|CD878081 AZO4.101N22R011122 AZO4 Triticum aes... 52 1e-004
emb|AX660696.1| Sequence 1053 from Patent WO03000906 50 6e-004
gb|CA599582.1|CA599582 waw1c.pk003.e20 waw1c Triticum aesti... 48 0.002
gb|CV777756.1|CV777756 FGAS072163 Triticum aestivum FGAS: L... 48 0.002
gb|CA728456.1|CA728456 wdi1c.pk004.m18 wdi1c Triticum aesti... 46 0.009
gb|BQ483659.1|BQ483659 WHE3511_B04_D07ZS Wheat unstressed r... 44 0.036
gb|BQ806129.1|BQ806129 WHE3575_B07_C13ZS Wheat developing g... 44 0.036
gb|BJ279797.1|BJ279797 BJ279797 Y. Ogihara unpublished cDNA... 42 0.14
gb|BJ284780.1|BJ284780 BJ284780 Y. Ogihara unpublished cDNA... 42 0.14
gb|BJ303490.1|BJ303490 BJ303490 Y. Ogihara unpublished cDNA... 42 0.14
gb|BJ309363.1|BJ309363 BJ309363 Y. Ogihara unpublished cDNA... 42 0.14
gb|CA633567.1|CA633567 wle1n.pk0075.h10 wle1n Triticum aest... 42 0.14
gb|AL808414.1|AL808414 AL808414 a:22 Triticum aestivum cDNA... 42 0.14
gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, part... 42 0.14
>gb|BJ245820.1|BJ245820 BJ245820 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf20e17 5', mRNA sequence
Length = 665
Score = 860 bits (434), Expect = 0.0
Identities = 581/630 (92%)
Strand = Plus / Plus
Query: 842 ggtacgtcatctacgtgaaggccggcctctacgacgagatcgtcatggtccccaaggaca 901
||||||| |||||||| ||||| || ||||||| ||||| |||||||||||||||||||
Sbjct: 36 ggtacgtgatctacgtcaaggctggggtctacgaagagatggtcatggtccccaaggaca 95
Query: 902 aggtcaacatcttcatgtacggcgacgggcctaagcaaagccgcgtgaccggccgcaaga 961
|||||||||| |||||||| |||||||| || |||||||||||||| |||||| | ||||
Sbjct: 96 aggtcaacatattcatgtatggcgacggccccaagcaaagccgcgtcaccggcagtaaga 155
Query: 962 gcttcgccgacggcatcaccaccatgaagaccgccaccttctccgtcgaggcgtccgggt 1021
|||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||
Sbjct: 156 gcttcgccgacggcatcaccaccatgaagaccgccaccttctccattgaggcggccgggt 215
Query: 1022 tcatctgcaagaacatggggttccacaacacggccggcgcggagcggcaccaggcggtgg 1081
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 216 tcatctgcaagaacatggggttccacaacacggctggcgcggagaagcaccaggcggtgg 275
Query: 1082 cgctccgggtgcagggggacctcgcggcgttctacaactgccggttcgacgcgttccagg 1141
|||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 276 cgctgcgggtgcagggcgacctctcggcgttcttcaactgccggttcgacgcgttccagg 335
Query: 1142 acacgctgtacgtgcacgcgcggcggcagttcttccgcaactgcgtggtctccggcacca 1201
||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 336 acacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgtcatctccggcacca 395
Query: 1202 tcgacttcatcttcggcaactcggcggcggtgttccagaactgcctcatcatcacgcggc 1261
||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |
Sbjct: 396 tcgacttcatcttcggcaactcggccgccgtgttccagaactgtctcatcatcacgcgcc 455
Query: 1262 ggcccatggacaaccagcagaactcggtgacggcgcacgggcgcaccgaccccaacatga 1321
||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 456 ggcccatggacaaccagcagaactcggtgactgcgcacggccgcacggaccccaacatga 515
Query: 1322 agtccgggctcgtcatccagaactgccgcctggtgcccgaccagaagctgttcccggacc 1381
|||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 516 agtccgggctggtgatccagaactgccgcctggtgccggaccagaagctgttcgcggacc 575
Query: 1382 gcttcaagatcccctcgtacctgggccgcccctggaaggagttctcgcgcctcgtcatca 1441
||||||||||||| || ||||||||| | || ||||||||||||||||| || |||||||
Sbjct: 576 gcttcaagatcccgtcctacctgggcaggccgtggaaggagttctcgcggctggtcatca 635
Query: 1442 tggagagcaccatcgccgacttcgtcaagc 1471
||||||||| |||||||||||| ||||||
Sbjct: 636 tggagagcatgatcgccgacttcatcaagc 665
>gb|BJ243936.1|BJ243936 BJ243936 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf13h13 5', mRNA sequence
Length = 582
Score = 805 bits (406), Expect = 0.0
Identities = 535/578 (92%)
Strand = Plus / Plus
Query: 996 caccttctccgtcgaggcgtccgggttcatctgcaagaacatggggttccacaacacggc 1055
||||||| || | |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caccttccccattgaggcggccgggttcatctgcaagaacatggggttccacaacacggc 60
Query: 1056 cggcgcggagcggcaccaggcggtggcgctccgggtgcagggggacctcgcggcgttcta 1115
||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 61 tggcgcggagaagcaccaggcggtggcgctgcgggtgcagggcgacctctcggcgttctt 120
Query: 1116 caactgccggttcgacgcgttccaggacacgctgtacgtgcacgcgcggcggcagttctt 1175
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 121 caactgccggttcgacgcgttccaggacacgctgtacgtgcacgcccggcgccagttctt 180
Query: 1176 ccgcaactgcgtggtctccggcaccatcgacttcatcttcggcaactcggcggcggtgtt 1235
|||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 181 ccgcaactgcgtcatctccggcaccatcgacttcatcttcggcaactcggccgccgtgtt 240
Query: 1236 ccagaactgcctcatcatcacgcggcggcccatggacaaccagcagaactcggtgacggc 1295
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 241 ccagaactgtctcatcatcacgcgccggcccatggacaaccagcagaactcggtgactgc 300
Query: 1296 gcacgggcgcaccgaccccaacatgaagtccgggctcgtcatccagaactgccgcctggt 1355
|||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 301 gcacggccgcacggaccccaacatgaagtccgggctggtgatccagaactgccgcctggt 360
Query: 1356 gcccgaccagaagctgttcccggaccgcttcaagatcccctcgtacctgggccgcccctg 1415
||| ||||||||||||||| ||||||||||||||||||| || ||||||||| | || ||
Sbjct: 361 gccggaccagaagctgttcgcggaccgcttcaagatcccgtcctacctgggcaggccgtg 420
Query: 1416 gaaggagttctcgcgcctcgtcatcatggagagcaccatcgccgacttcgtcaagccaga 1475
||||||||||||||| || |||||||||||||||| |||||||||||| ||||||| ||
Sbjct: 421 gaaggagttctcgcggctggtcatcatggagagcatgatcgccgacttcatcaagcccga 480
Query: 1476 ggggtacatgccctggaacggcgacttcgccctcaagacgctctactacgccgagtacaa 1535
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 481 ggggtacatgccgtggaacggcgacttcgcgctcaagacgctctactacgccgagttcgg 540
Query: 1536 caaccgcgggcccggcgccggcaccagcaagagggtca 1573
||||||||| ||||||||||||||||||||||||||||
Sbjct: 541 caaccgcggccccggcgccggcaccagcaagagggtca 578
>gb|BJ250225.1|BJ250225 BJ250225 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf9k15 3', mRNA sequence
Length = 701
Score = 531 bits (268), Expect = e-149
Identities = 393/435 (90%)
Strand = Plus / Minus
Query: 1234 ttccagaactgcctcatcatcacgcggcggcccatggacaaccagcagaactcggtgacg 1293
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 700 ttccagaactgcntcatcatcacgcgccggcccatggacaaccagcagaactcggtgacc 641
Query: 1294 gcgcacgggcgcaccgaccccaacatgaagtccgggctcgtcatccagaactgccgcctg 1353
|||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 640 gcgcacggccgcacggaccccaacatgaagtccgggctggtcatccagaactgccgcctg 581
Query: 1354 gtgcccgaccagaagctgttcccggaccgcttcaagatcccctcgtacctgggccgcccc 1413
||||| ||||||||||||||| ||||||||||||||||||| || | ||||||||| ||
Sbjct: 580 gtgccggaccagaagctgttcgcggaccgcttcaagatcccgtccttcctgggccggccg 521
Query: 1414 tggaaggagttctcgcgcctcgtcatcatggagagcaccatcgccgacttcgtcaagcca 1473
||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||
Sbjct: 520 tggaaggagttctcgcggctggtcatcatggagagcatgatcgccgacttcatcaagccc 461
Query: 1474 gaggggtacatgccctggaacggcgacttcgccctcaagacgctctactacgccgagtac 1533
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 460 gaggggtacatgccgtggaacggcgacttcgggctcaagacgctctactacgccgagttc 401
Query: 1534 aacaaccgcgggcccggcgccggcaccagcaagagggtcaactggcccggcttccacgtc 1593
||||||||| |||||||||||||||||||||||||||| |||||| || |||| ||||
Sbjct: 400 ggcaaccgcggccccggcgccggcaccagcaagagggtcacctggccagggttccgcgtc 341
Query: 1594 atcggacggaaggaggccgagccgttcaccgccgggccgttcatcgacggcgccatgtgg 1653
||||| ||||||||||||| ||||||||| ||||| ||||||||||| || | |||
Sbjct: 340 atcgggaacaaggaggccgagcagttcaccgcagggcccttcatcgacggggcgacatgg 281
Query: 1654 ctcaagtacaccggc 1668
||||||| |||||||
Sbjct: 280 ctcaagttcaccggc 266
>gb|BJ285920.1|BJ285920 BJ285920 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr13h13 3', mRNA sequence
Length = 697
Score = 515 bits (260), Expect = e-144
Identities = 393/436 (90%), Gaps = 1/436 (0%)
Strand = Plus / Minus
Query: 1234 ttccagaactgcctcatcatcacgcggcggcccatggacaaccagcagaactcggtgacg 1293
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 697 ttccagaactgtctcatcatcacgcgccggcccatggacaaccagcagaactcggtgact 638
Query: 1294 gcgcacgggcgcaccgacccc-aacatgaagtccgggctcgtcatccagaactgccgcct 1352
|||||||| ||||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 637 gcgcacggccgcacggacccccaacatgaagtccgggctggtgatccagaactgccgcct 578
Query: 1353 ggtgcccgaccagaagctgttcccggaccgcttcaagatcccctcgtacctgggccgccc 1412
|||||| ||||||||||||||| ||||||||||||||||||| || ||||||||| | ||
Sbjct: 577 ggtgccggaccagaagctgttcgcggaccgcttcaagatcccgtcctacctgggcaggcc 518
Query: 1413 ctggaaggagttctcgcgcctcgtcatcatggagagcaccatcgccgacttcgtcaagcc 1472
||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||
Sbjct: 517 gtggaaggagttctcgcggctggtcatcatggagagcatgatcgccgacttcatcaagcc 458
Query: 1473 agaggggtacatgccctggaacggcgacttcgccctcaagacgctctactacgccgagta 1532
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 457 cgaggggtacatgccgtggaacggcgacttcgcgctcaagacgctctactacgccgagtt 398
Query: 1533 caacaaccgcgggcccggcgccggcaccagcaagagggtcaactggcccggcttccacgt 1592
| ||||||||| |||||||||||||||||||||||||||| |||||| || |||| |||
Sbjct: 397 cggcaaccgcggccccggcgccggcaccagcaagagggtcacctggccagggttccgcgt 338
Query: 1593 catcggacggaaggaggccgagccgttcaccgccgggccgttcatcgacggcgccatgtg 1652
|||||| ||||||||||||| ||||||||| ||||| ||||||||||| || | ||
Sbjct: 337 catcgggaacaaggaggccgagcagttcaccgcagggcccttcatcgacggggcgacatg 278
Query: 1653 gctcaagtacaccggc 1668
|||||||| |||||||
Sbjct: 277 gctcaagttcaccggc 262
>gb|BJ251714.1|BJ251714 BJ251714 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf20e17 3', mRNA sequence
Length = 632
Score = 474 bits (239), Expect = e-131
Identities = 359/399 (89%)
Strand = Plus / Minus
Query: 1270 gacaaccagcagaactcggtgacggcgcacgggcgcaccgaccccaacatgaagtccggg 1329
||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 632 gacaaccagcagaactcggtgactgcgcacggccgcacggaccccaacatgaagtccggg 573
Query: 1330 ctcgtcatccagaactgccgcctggtgcccgaccagaagctgttcccggaccgcttcaag 1389
|| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 572 ctggtgatccagaactgccgcctggtgccggaccagaagctgttcgcggaccgcttcaag 513
Query: 1390 atcccctcgtacctgggccgcccctggaaggagttctcgcgcctcgtcatcatggagagc 1449
||||| || ||||||||| | || ||||||||||||||||| || |||||||||||||||
Sbjct: 512 atcccgtcctacctgggcaggccgtggaaggagttctcgcggctggtcatcatggagagc 453
Query: 1450 accatcgccgacttcgtcaagccagaggggtacatgccctggaacggcgacttcgccctc 1509
| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 452 atgatcgccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgcgctc 393
Query: 1510 aagacgctctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaagagg 1569
|||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 392 aagacgctctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagg 333
Query: 1570 gtcaactggcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgccggg 1629
|||| |||||| || |||| ||||||||| ||||||||||||| ||||||||| |||
Sbjct: 332 gtcacctggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgcaggg 273
Query: 1630 ccgttcatcgacggcgccatgtggctcaagtacaccggc 1668
|| ||||||||||| || | |||||||||| |||||||
Sbjct: 272 cccttcatcgacggggcgacatggctcaagttcaccggc 234
>gb|BJ251252.1|BJ251252 BJ251252 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf19e14 3', mRNA sequence
Length = 613
Score = 436 bits (220), Expect = e-120
Identities = 349/391 (89%), Gaps = 1/391 (0%)
Strand = Plus / Minus
Query: 1279 cagaactcggtgacggcgcacgggcgcaccg-accccaacatgaagtccgggctcgtcat 1337
|||||||||||||| | |||||| ||||| | |||||||||||||||||||||| || ||
Sbjct: 613 cagaactcggtgactgngcacggccgcacgggaccccaacatgaagtccgggctggtgat 554
Query: 1338 ccagaactgccgcctggtgcccgaccagaagctgttcccggaccgcttcaagatcccctc 1397
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||
Sbjct: 553 ccagaactgccgcctggtgccggaccagaagctgttcgcggaccgcttcaagatcccgtc 494
Query: 1398 gtacctgggccgcccctggaaggagttctcgcgcctcgtcatcatggagagcaccatcgc 1457
||||||||| | || ||||||||||||||||| || |||||||||||||||| |||||
Sbjct: 493 ctacctgggcaggccgtggaaggagttctcgcggctggtcatcatggagagcatgatcgc 434
Query: 1458 cgacttcgtcaagccagaggggtacatgccctggaacggcgacttcgccctcaagacgct 1517
||||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 433 cgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgcgctcaagacgct 374
Query: 1518 ctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaagagggtcaactg 1577
|||||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 373 ctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagggtcacctg 314
Query: 1578 gcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgccgggccgttcat 1637
||| || |||| ||||||||| ||||||||||||| ||||||||| ||||| |||||
Sbjct: 313 gccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgcagggcccttcat 254
Query: 1638 cgacggcgccatgtggctcaagtacaccggc 1668
|||||| || | |||||||||| |||||||
Sbjct: 253 cgacggggcgacatggctcaagttcaccggc 223
>gb|BJ244140.1|BJ244140 BJ244140 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf14g15 5', mRNA sequence
Length = 591
Score = 422 bits (213), Expect = e-116
Identities = 267/285 (93%)
Strand = Plus / Plus
Query: 962 gcttcgccgacggcatcaccaccatgaagaccgccaccttctccgtcgaggcgtccgggt 1021
||||||||||||||||||||||||||||||| |||||||||||| | |||||| ||||||
Sbjct: 1 gcttcgccgacggcatcaccaccatgaagacagccaccttctccattgaggcggccgggt 60
Query: 1022 tcatctgcaagaacatggggttccacaacacggccggcgcggagcggcaccaggcggtgg 1081
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 tcatctgcaagaacatggggttccacaacacggccggcgcggagaagcaccaggcggtgg 120
Query: 1082 cgctccgggtgcagggggacctcgcggcgttctacaactgccggttcgacgcgttccagg 1141
|||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 121 cgctgagggtgcagggcgacctctcggcgttcttcaactgccggttcgacgcgttccagg 180
Query: 1142 acacgctgtacgtgcacgcgcggcggcagttcttccgcaactgcgtggtctccggcacca 1201
|||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 181 acacgctgtatgtgcacgcccggcgccagttcttccgcaactgcgtcatctccggcacca 240
Query: 1202 tcgacttcatcttcggcaactcggcggcggtgttccagaactgcc 1246
||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 241 tcgacttcatcttcggcaactcggccgccgtgttccagaactgcc 285
Score = 355 bits (179), Expect = 7e-096
Identities = 275/307 (89%)
Strand = Plus / Plus
Query: 1337 tccagaactgccgcctggtgcccgaccagaagctgttcccggaccgcttcaagatcccct 1396
|||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||| |
Sbjct: 274 tccagaactgccgcctggtgccggaccagaagctcttcgcggaccgcctcaagatcccgt 333
Query: 1397 cgtacctgggccgcccctggaaggagttctcgcgcctcgtcatcatggagagcaccatcg 1456
| ||||||||||| || ||||||||||||||||| || |||||||||||||||| ||||
Sbjct: 334 cctacctgggccggccgtggaaggagttctcgcggctggtcatcatggagagcatgatcg 393
Query: 1457 ccgacttcgtcaagccagaggggtacatgccctggaacggcgacttcgccctcaagacgc 1516
|||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 394 ccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgggctcaagacgc 453
Query: 1517 tctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaagagggtcaact 1576
||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 454 tctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagggtcacct 513
Query: 1577 ggcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgccgggccgttca 1636
|||| || |||| ||||||||| ||||||||||||| ||||||||| ||||| ||||
Sbjct: 514 ggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgcagggcccttca 573
Query: 1637 tcgacgg 1643
|||||||
Sbjct: 574 tcgacgg 580
>gb|BJ251281.1|BJ251281 BJ251281 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf19g21 3', mRNA sequence
Length = 576
Score = 375 bits (189), Expect = e-102
Identities = 303/341 (88%)
Strand = Plus / Minus
Query: 1328 ggctcgtcatccagaactgccgcctggtgcccgaccagaagctgttcccggaccgcttca 1387
|||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 576 ggctggtcatccagaactgccgcctggtgccggaccagaagctgttcgcggaccgcttca 517
Query: 1388 agatcccctcgtacctgggccgcccctggaaggagttctcgcgcctcgtcatcatggaga 1447
||||||| || | ||||||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 516 agatcccgtccttcctgggccggccgtggaaggagttctcgcggctggtcatcatggaga 457
Query: 1448 gcaccatcgccgacttcgtcaagccagaggggtacatgccctggaacggcgacttcgccc 1507
||| |||||||||||| ||||||| |||||||||||||| |||||||||||||||| |
Sbjct: 456 gcatgatcgccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgggc 397
Query: 1508 tcaagacgctctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaaga 1567
|||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||
Sbjct: 396 tcaagacgctctactacgccgagttcggcaaccacggccccggcgccggcaccagcaaga 337
Query: 1568 gggtcaactggcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgccg 1627
|||||| |||||| || |||| ||||||||| ||||||||||||| ||||||||| |
Sbjct: 336 gggtcacctggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgcag 277
Query: 1628 ggccgttcatcgacggcgccatgtggctcaagtacaccggc 1668
|||| ||||||||||| || | |||||||||| |||||||
Sbjct: 276 ggcccttcatcgacggggcgacatggctcaagttcaccggc 236
>gb|BJ249930.1|BJ249930 BJ249930 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf14g15 3', mRNA sequence
Length = 712
Score = 365 bits (184), Expect = 8e-099
Identities = 295/332 (88%)
Strand = Plus / Minus
Query: 1337 tccagaactgccgcctggtgcccgaccagaagctgttcccggaccgcttcaagatcccct 1396
|||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||| |
Sbjct: 586 tccagaactgccgcctggtgccggaccagaagctcttcgcggaccgcctcaagatcccgt 527
Query: 1397 cgtacctgggccgcccctggaaggagttctcgcgcctcgtcatcatggagagcaccatcg 1456
| ||||||||||| || ||||||||||||||||| || |||||||||||||||| ||||
Sbjct: 526 cctacctgggccggccgtggaaggagttctcgcggctggtcatcatggagagcatgatcg 467
Query: 1457 ccgacttcgtcaagccagaggggtacatgccctggaacggcgacttcgccctcaagacgc 1516
|||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 466 ccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgggctcaagacgc 407
Query: 1517 tctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaagagggtcaact 1576
||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 406 tctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagggtcacct 347
Query: 1577 ggcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgccgggccgttca 1636
|||| || |||| ||||||||| ||||||||||||| ||||||||| ||||| ||||
Sbjct: 346 ggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgcagggcccttca 287
Query: 1637 tcgacggcgccatgtggctcaagtacaccggc 1668
||||||| || | |||||||||| |||||||
Sbjct: 286 tcgacggggcgacatggctcaagttcaccggc 255
Score = 178 bits (90), Expect = 1e-042
Identities = 128/138 (92%), Gaps = 2/138 (1%)
Strand = Plus / Minus
Query: 1111 ttctacaactgccggttcgacgcgtt-ccaggacacgctgtacgtgcacgcgcggcggca 1169
|||| ||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 712 ttcttcaactgccggttcgacgcgttnccaggacacgctgtatgtgcacgcccggcgcca 653
Query: 1170 gttcttccgcaactgcgtggtctccggcaccatcgacttcatcttcggcaactc-ggcgg 1228
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
Sbjct: 652 gttcttccgcaactgcgtcatctccggcaccatcgacttcatcttcggcaactcgggccg 593
Query: 1229 cggtgttccagaactgcc 1246
| ||||||||||||||||
Sbjct: 592 ccgtgttccagaactgcc 575
>gb|BJ244416.1|BJ244416 BJ244416 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9k15 5', mRNA sequence
Length = 621
Score = 353 bits (178), Expect = 3e-095
Identities = 480/576 (83%), Gaps = 6/576 (1%)
Strand = Plus / Plus
Query: 40 atcctcgtcgtggcggtggtcgtcggtgtggtcgccaccgtcacccgctccggcaagaa- 98
||||| ||||| ||||| || || || || ||||||||||| ||| ||||||| || ||
Sbjct: 33 atccttgtcgtcgcggtcgtggtgggcgtagtcgccaccgtgaccagctccggtaataat 92
Query: 99 --ggccggcgacaacttcacggtcccgggggaggcttcccttgccaacgtccggcaagtc 156
||||||||||||||||| |||||||| ||||| |||||||| | |||||||||||
Sbjct: 93 aaggccggcgacaacttcaatgtcccgggtgaggccaaccttgccacc-tccggcaagtc 151
Query: 157 ggtcaagtccctgtgcgcgcccaccctgtacaaggagtcgtgcgagaagacgttgtccca 216
||||||||| |||||||| ||||| |||||||||||||||||||||||||| | ||
Sbjct: 152 ggtcaagtctctgtgcgcccccacgctgtacaaggagtcgtgcgagaagaccctcacctc 211
Query: 217 ggccaccaatggcaccgagaaccccaaggaggtgttccacagcgtggccaaggtggcgct 276
|||| |||||||||||||||||||||| ||||||||| || ||| |||||| |||| |
Sbjct: 212 ggcctccaatggcaccgagaaccccaaagaggtgttcgccaccgttgccaagtcggcgtt 271
Query: 277 ggagtcggtccagacggcggtcgagcagtccaagtcgatcggcgaggccaaggc-agcga 335
||||||| || || ||||||| |||| ||| || ||||| ||||||||| | |||||
Sbjct: 272 ggagtcgatcaagtcggcggtggagcggtcaaaaagtatcggggaggccaagtcgagcga 331
Query: 336 ctccatgaccgagagcgcgcgcgaggactgcaagaagctcctggaggacgctgccgacga 395
| || |||| ||| |||||||| ||||||||||| ||||||||||||| | | |||||
Sbjct: 332 ccccttgacggagggcgcgcgccaggactgcaaggagctcctggaggattccgtggacga 391
Query: 396 cctgaggggcatgctcgagatggccggcggtgacatcaaggtgctgttcagtcggtccga 455
||| | ||||||| |||||||||||||||| |||||||||||||| | | || ||||
Sbjct: 392 cctcaagggcatggtcgagatggccggcggcgacatcaaggtgctccttggccgcaccga 451
Query: 456 cgacctcgagacctggctca-cgggcgtcatgacgttcatggacacctgcgtcgacggct 514
|||||||||| |||| ||| | || || ||||| || || |||||||||| ||| ||||
Sbjct: 452 cgacctcgagcactggatcacccggtgtgatgacctttatcgacacctgcgccgatggct 511
Query: 515 tcgtcgacgagaagctcaaggccgacatgcactccgtcgtgcgcaacgccaccgagctca 574
||| |||||||||||||||||| |||||||| | || ||||||||||||| |||||||
Sbjct: 512 tcgccgacgagaagctcaaggcggacatgcagggcatcctgcgcaacgccacggagctca 571
Query: 575 gcagcaacgcgctggccatcaccaacagcctcggcg 610
||||||||||||| ||||||||||||||||||||||
Sbjct: 572 gcagcaacgcgctcgccatcaccaacagcctcggcg 607
>gb|BJ245399.1|BJ245399 BJ245399 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19g21 5', mRNA sequence
Length = 551
Score = 339 bits (171), Expect = 4e-091
Identities = 418/499 (83%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 146 tccggcaagtcggtcaagtccctgtgcgcgcccaccctgtacaaggagtcgtgcgagaag 205
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 39 tccggcaagtcggtcaagtctctgtgcgcccccacgctgtacaaggagtcgtgcgagaag 98
Query: 206 acgttgtcccaggccaccaatggcaccgagaaccccaaggaggtgttccacagcgtggcc 265
|| | || |||| |||||||||||||||||||||| ||||||||| || ||| |||
Sbjct: 99 accctcacctcggcctccaatggcaccgagaaccccaaagaggtgttcgccaccgttgcc 158
Query: 266 aaggtggcgctggagtcggtccagacggcggtcgagcagtccaagtcgatcggcgaggcc 325
||| |||| |||||||| || || ||||||| |||| ||| || ||||| ||||||
Sbjct: 159 aagtcggcgttggagtcgatcaagtcggcggtggagcggtcaaaaagtatcggggaggcc 218
Query: 326 aaggc-agcgactccatgaccgagagcgcgcgcgaggactgcaagaagctcctggaggac 384
||| | |||||| || |||| ||| |||||||| ||||||||||| |||||||||||||
Sbjct: 219 aagtcgagcgaccccttgacggagggcgcgcgccaggactgcaaggagctcctggaggat 278
Query: 385 gctgccgacgacctgaggggcatgctcgagatggccggcggtgacatcaaggtgctgttc 444
| | |||||||| | ||||||| |||||||||||||||| |||||||||||||| |
Sbjct: 279 tccgtggacgacctcaagggcatggtcgagatggccggcggcgacatcaaggtgctcctt 338
Query: 445 agtcggtccgacgacctcgagacctggctcacgggcgtcatgacgttcatggacacctgc 504
| || |||||||||||||| |||| |||| || || ||||| || || |||||||||
Sbjct: 339 ggccgcaccgacgacctcgagcactggatcaccggtgtgatgacctttatcgacacctgc 398
Query: 505 gtcgacggcttcgtcgacgagaagctcaaggccgacatgcactccgtcgtgcgcaacgcc 564
| ||| ||||||| |||||||||||||||||| |||||||| | || |||||||||||
Sbjct: 399 gccgatggcttcgccgacgagaagctcaaggcggacatgcagggcatcctgcgcaacgcc 458
Query: 565 accgagctcagcagcaacgcgctggccatcaccaacagcctcggcgggatcctgaagaag 624
|| |||||||||||||||||||| |||||||||||||||||||||| ||| | ||||||
Sbjct: 459 acggagctcagcagcaacgcgctcgccatcaccaacagcctcggcgccatcttcaagaag 518
Query: 625 atggacctcggcatgttca 643
| ||||||| | ||||||
Sbjct: 519 ctcgacctcgacgtgttca 537
>gb|BJ245374.1|BJ245374 BJ245374 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19e14 5', mRNA sequence
Length = 467
Score = 246 bits (124), Expect = 5e-063
Identities = 356/430 (82%), Gaps = 5/430 (1%)
Strand = Plus / Plus
Query: 40 atcctcgtcgtggcggtggtcgtcggtgtggtcgccaccgtcacccgctccgg---caag 96
||||| ||||| ||||| || || || || ||||||||||| ||| ||||||| |||
Sbjct: 34 atccttgtcgtcgcggtcgtggtgggcgtagtcgccaccgtgaccagctccggtaacaat 93
Query: 97 aaggccggcgacaacttcacggtcccgggggaggcttcccttgccaacgtccggcaagtc 156
||||||||||||||||||| ||||| || ||||| |||||||| | |||||||||||
Sbjct: 94 aaggccggcgacaacttcaatgtcccaggtgaggccaaccttgccacc-tccggcaagtc 152
Query: 157 ggtcaagtccctgtgcgcgcccaccctgtacaaggagtcgtgcgagaagacgttgtccca 216
||||||||| |||||||| ||||| |||||||||||||||||||||||||| | ||
Sbjct: 153 ggtcaagtctctgtgcgcccccacgctgtacaaggagtcgtgcgagaagaccctcacctc 212
Query: 217 ggccaccaatggcaccgagaaccccaaggaggtgttccacagcgtggccaaggtggcgct 276
|||| |||||||||||||||||||||| ||||||||| || ||| |||||| |||| |
Sbjct: 213 ggcctccaatggcaccgagaaccccaaagaggtgttcgccaccgttgccaagtcggcgat 272
Query: 277 ggagtcggtccagacggcggtcgagcagtccaagtcgatcggcgaggccaaggc-agcga 335
||||||| || || ||||||| |||| ||| || ||||| |||| |||| | |||||
Sbjct: 273 ggagtcgatcaagtcggcggtggagcggtcaaaaagtatcggggaggtcaagtcgagcga 332
Query: 336 ctccatgaccgagagcgcgcgcgaggactgcaagaagctcctggaggacgctgccgacga 395
| || |||| ||| |||||||| ||||||||||| |||||||||||||| | | |||||
Sbjct: 333 ccccttgacggagggcgcgcgccaggactgcaaggagctcctggaggactccgtggacga 392
Query: 396 cctgaggggcatgctcgagatggccggcggtgacatcaaggtgctgttcagtcggtccga 455
||| | ||||||| |||||||||||||||| |||||||||||||| | || || ||||
Sbjct: 393 cctcaagggcatggtcgagatggccggcggcgacatcaaggtgctccttagccgcaccga 452
Query: 456 cgacctcgag 465
||||||||||
Sbjct: 453 cgacctcgag 462
>gb|BF484702.1|BF484702 WHE2318_F12_K24ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2318_F12_K24, mRNA sequence
Length = 455
Score = 228 bits (115), Expect = 1e-057
Identities = 278/331 (83%), Gaps = 1/331 (0%)
Strand = Plus / Plus
Query: 314 atcggcgaggccaaggc-agcgactccatgaccgagagcgcgcgcgaggactgcaagaag 372
||||| ||||||||| | |||||| || |||| ||| |||||||| ||||||||||| ||
Sbjct: 66 atcggggaggccaagtcgagcgaccccttgacggagggcgcgcgccaggactgcaaggag 125
Query: 373 ctcctggaggacgctgccgacgacctgaggggcatgctcgagatggccggcggtgacatc 432
||||||||||| | | |||||||| | ||||||| |||||||||||||||| ||||||
Sbjct: 126 ctcctggaggattccgtggacgacctcaagggcatggtcgagatggccggcggcgacatc 185
Query: 433 aaggtgctgttcagtcggtccgacgacctcgagacctggctcacgggcgtcatgacgttc 492
|||||||| | | || |||||||||||||| |||| |||| || || ||||| ||
Sbjct: 186 aaggtgctccttggccgcaccgacgacctcgagcactggatcaccggtgtgatgaccttt 245
Query: 493 atggacacctgcgtcgacggcttcgtcgacgagaagctcaaggccgacatgcactccgtc 552
|| |||||||||| ||| ||||||| |||||||||||||||||| |||||||| | ||
Sbjct: 246 atcgacacctgcgccgatggcttcgccgacgagaagctcaaggcggacatgcagggcatc 305
Query: 553 gtgcgcaacgccaccgagctcagcagcaacgcgctggccatcaccaacagcctcggcggg 612
||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 306 ctgcgcaacgccacggagctcagcagcaacgcgctcgccatcaccaacagcctcggcgcc 365
Query: 613 atcctgaagaagatggacctcggcatgttca 643
||| | |||||| | ||||||| | ||||||
Sbjct: 366 atcttcaagaagctcgacctcgacgtgttca 396
>gb|BJ249211.1|BJ249211 BJ249211 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23o10 5', mRNA sequence
Length = 410
Score = 202 bits (102), Expect = 7e-050
Identities = 313/380 (82%), Gaps = 5/380 (1%)
Strand = Plus / Plus
Query: 40 atcctcgtcgtggcggtggtcgtcggtgtggtcgccaccgtcacccgctccgg---caag 96
||||| ||||| ||||| || || || || ||||||||||| ||| ||||||| |||
Sbjct: 32 atccttgtcgtcgcggtcgtggtgggcgtagtcgccaccgtgaccagctccggtaacaat 91
Query: 97 aaggccggcgacaacttcacggtcccgggggaggcttcccttgccaacgtccggcaagtc 156
||||||||||||||||||| ||||| || ||||| |||||||| | |||||||||||
Sbjct: 92 aaggccggcgacaacttcaatgtcccaggtgaggccaaccttgccacc-tccggcaagtc 150
Query: 157 ggtcaagtccctgtgcgcgcccaccctgtacaaggagtcgtgcgagaagacgttgtccca 216
||||||||| |||||||| ||||| |||||||||||||||||||||||||| | ||
Sbjct: 151 ggtcaagtctctgtgcgcccccacgctgtacaaggagtcgtgcgagaagaccctcacctc 210
Query: 217 ggccaccaatggcaccgagaaccccaaggaggtgttccacagcgtggccaaggtggcgct 276
|||| |||||||||||||||||||||| ||||||||| || ||| |||||| |||| |
Sbjct: 211 ggcctccaatggcaccgagaaccccaaagaggtgttcgccaccgttgccaagtcggcgat 270
Query: 277 ggagtcggtccagacggcggtcgagcagtccaagtcgatcggcgaggccaaggc-agcga 335
||||||| || || ||||||| |||| ||| || ||||| |||| |||| | |||||
Sbjct: 271 ggagtcgatcaagtcggcggtggagcggtcaaaaagtatcggggaggtcaagtcgagcga 330
Query: 336 ctccatgaccgagagcgcgcgcgaggactgcaagaagctcctggaggacgctgccgacga 395
| || |||| ||| |||||||| ||||||||||| |||||||||||||| | | |||||
Sbjct: 331 ccccttgacggagggcgcgcgccaggactgcaaggagctcctggaggactccgtggacga 390
Query: 396 cctgaggggcatgctcgaga 415
||| | ||||||| ||||||
Sbjct: 391 cctcaagggcatggtcgaga 410
>gb|BJ255470.1|BJ255470 BJ255470 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf23o10 3', mRNA sequence
Length = 440
Score = 163 bits (82), Expect = 6e-038
Identities = 142/162 (87%)
Strand = Plus / Minus
Query: 1507 ctcaagacgctctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaag 1566
||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||
Sbjct: 436 ctcaagacgctctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaag 377
Query: 1567 agggtcaactggcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgcc 1626
||||||| |||||| || |||| ||||||||| ||||||||||||| |||||||||
Sbjct: 376 agggtcacctggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgca 317
Query: 1627 gggccgttcatcgacggcgccatgtggctcaagtacaccggc 1668
||||| ||||||||||| || | |||||||||| |||||||
Sbjct: 316 gggcccttcatcgacggggcgacatggctcaagttcaccggc 275
>gb|CA593973.1|CA593973 wpa1c.pk004.c19 wpa1c Triticum aestivum cDNA clone wpa1c.pk004.c19 5'
end, mRNA sequence
Length = 534
Score = 149 bits (75), Expect = 9e-034
Identities = 172/203 (84%), Gaps = 1/203 (0%)
Strand = Plus / Plus
Query: 1119 ctgccggttcgacgcgttccaggacacgctgtacgtgcacgcgcggcggcagttcttccg 1178
|||| ||||||| | || ||||||||| |||||||||||||| ||||||||||||||
Sbjct: 51 ctgcaggttcgaggggtaccaggacaccctgtacgtgcacgccaaccggcagttcttccg 110
Query: 1179 caactgcgtggtctccggcaccatcgacttcatcttcggcaactcggcggcggtgttcc- 1237
|||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 caactgcgaggtgttgggcaccatcgacttcatcttcggcaactcggcggcggtgttcca 170
Query: 1238 agaactgcctcatcatcacgcggcggcccatggacaaccagcagaactcggtgacggcgc 1297
||||||||||||| | |||| ||||||||| | |||| || |||||| ||||
Sbjct: 171 agaactgcctcatgacggtgcggaagcccatggaaagccagggcaatatggtgaccgcgc 230
Query: 1298 acgggcgcaccgaccccaacatg 1320
|||||||||| ||||||||||||
Sbjct: 231 acgggcgcacggaccccaacatg 253
Score = 65.9 bits (33), Expect = 1e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1165 cggcagttcttccgcaactgcgtggtctccggcaccatcgacttcatct 1213
|||||||||||||||||||||| ||| | |||||||||||||||||||
Sbjct: 4 cggcagttcttccgcaactgcgaggtgttgggcaccatcgacttcatct 52
>gb|BJ248171.1|BJ248171 BJ248171 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf5d01 5', mRNA sequence
Length = 254
Score = 141 bits (71), Expect = 2e-031
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 1166 ggcagttcttccgcaactgcgtggtctccggcaccatcgacttcatcttcggcaactcgg 1225
||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 12 ggcagttcttccgcaactgcgaggtgttgggcaccatcgacttcatcttcggcaactcgg 71
Query: 1226 cggcggtgttccagaactgcctcatcatcacgcggcggcccatggacaaccagcagaact 1285
||||||||||||||||||||||||| | |||| ||||||||| | |||| ||
Sbjct: 72 cggcggtgttccagaactgcctcatgacggtgcggaagcccatggaaagccagggcaata 131
Query: 1286 cggtgacggcgcacgggcgcaccgaccccaacatg 1320
|||||| |||||||||||||| ||||||||||||
Sbjct: 132 tggtgaccgcgcacgggcgcacggaccccaacatg 166
>gb|BJ248423.1|BJ248423 BJ248423 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf6d01 5', mRNA sequence
Length = 276
Score = 115 bits (58), Expect = 1e-023
Identities = 109/126 (86%)
Strand = Plus / Plus
Query: 1195 ggcaccatcgacttcatcttcggcaactcggcggcggtgttccagaactgcctcatcatc 1254
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 7 ggcaccatcgacttcatcttcggcaactcggcggcggtgttccagaactgcctcatgacg 66
Query: 1255 acgcggcggcccatggacaaccagcagaactcggtgacggcgcacgggcgcaccgacccc 1314
|||| ||||||||| | |||| || |||||| |||||||||||||| ||||||
Sbjct: 67 gtgcggaagcccatggaaagccagggcaatatggtgaccgcgcacgggcgcacggacccc 126
Query: 1315 aacatg 1320
||||||
Sbjct: 127 aacatg 132
>gb|BJ254306.1|BJ254306 BJ254306 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf5d01 3', mRNA sequence
Length = 516
Score = 87.7 bits (44), Expect = 3e-015
Identities = 136/167 (81%)
Strand = Plus / Minus
Query: 1507 ctcaagacgctctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaag 1566
|||||||||||||| |||||||||||| |||| ||||||||||||||| || ||||||
Sbjct: 384 ctcaagacgctctantacgccgagtacgccaacaccgggcccggcgccgggacaagcaag 325
Query: 1567 agggtcaactggcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgcc 1626
||||| | |||||| || | || |||||||||| | |||||| || ||||||||||
Sbjct: 324 agggtgacctggccggggtaccgtgtcatcggacaggctgaggccacgcagttcaccgcc 265
Query: 1627 gggccgttcatcgacggcgccatgtggctcaagtacaccggcgcgcc 1673
|| ||||||||||||| | ||||||||| |||||||| ||||
Sbjct: 264 ggcgtgttcatcgacggcatgagctggctcaagaacaccggcacgcc 218
Score = 54.0 bits (27), Expect = 4e-005
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1438 atcatggagagcaccatcgccgacttcgtcaagccagaggggt 1480
||||||||||||||||||| |||| || ||||||| |||||||
Sbjct: 453 atcatggagagcaccatcggcgacctcatcaagcccgaggggt 411
>gb|BJ254574.1|BJ254574 BJ254574 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf6d01 3', mRNA sequence
Length = 644
Score = 87.7 bits (44), Expect = 3e-015
Identities = 136/167 (81%)
Strand = Plus / Minus
Query: 1507 ctcaagacgctctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaag 1566
|||||||||||||| |||||||||||| |||| ||||||||||||||| || ||||||
Sbjct: 375 ctcaagacgctctantacgccgagtacgccaacaccgggcccggcgccgggacaagcaag 316
Query: 1567 agggtcaactggcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgcc 1626
||||| | |||||| || | || |||||||||| | |||||| || ||||||||||
Sbjct: 315 agggtgacctggccggggtaccgtgtcatcggacaggctgaggccacgcagttcaccgcc 256
Query: 1627 gggccgttcatcgacggcgccatgtggctcaagtacaccggcgcgcc 1673
|| ||||||||||||| | ||||||||| |||||||| ||||
Sbjct: 255 ggcgtgttcatcgacggcatgagctggctcaagaacaccggcacgcc 209
Score = 54.0 bits (27), Expect = 4e-005
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1438 atcatggagagcaccatcgccgacttcgtcaagccagaggggt 1480
||||||||||||||||||| |||| || ||||||| |||||||
Sbjct: 444 atcatggagagcaccatcggcgacctcatcaagcccgaggggt 402
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1287 ggtgacggcgcacgggcgcaccgaccccaacatg 1320
|||||| |||||||||||||| ||||||||||||
Sbjct: 595 ggtgaccgcgcacgggcgcacggaccccaacatg 562
>emb|AX660733.1| Sequence 1090 from Patent WO03000906
Length = 712
Score = 85.7 bits (43), Expect = 1e-014
Identities = 136/167 (81%)
Strand = Plus / Plus
Query: 1507 ctcaagacgctctactacgccgagtacaacaaccgcgggcccggcgccggcaccagcaag 1566
||||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||
Sbjct: 271 ctcaagacgctctactacgccgagtacgccaacaccgggcccggcgccgggacaagcaag 330
Query: 1567 agggtcaactggcccggcttccacgtcatcggacggaaggaggccgagccgttcaccgcc 1626
||||| | |||||| || | || || ||||||| | |||||| || ||||||||||
Sbjct: 331 agggtgacctggccggggtaccgtgtgatcggacaggccgaggccacgcagttcaccgcc 390
Query: 1627 gggccgttcatcgacggcgccatgtggctcaagtacaccggcgcgcc 1673
|| ||||||||||||| | ||||||||| |||||||| ||||
Sbjct: 391 ggcgtgttcatcgacggcatgagctggctcaagaacaccggcacgcc 437
Score = 48.1 bits (24), Expect = 0.002
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1439 tcatggagagcaccatcgccgacttcgtcaagccagaggg 1478
|||||||||||||||||| |||| || ||||||| |||||
Sbjct: 203 tcatggagagcaccatcggcgacctcatcaagcccgaggg 242
Score = 46.1 bits (23), Expect = 0.009
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1294 gcgcacgggcgcaccgaccccaacatg 1320
|||||||||||||| ||||||||||||
Sbjct: 58 gcgcacgggcgcacggaccccaacatg 84
>gb|BE606718.1|BE606718 WHE0907_G06_N11ZS Wheat 5-15 DAP spike cDNA library Triticum aestivum
cDNA clone WHE0907_G06_N11, mRNA sequence
Length = 479
Score = 81.8 bits (41), Expect = 2e-013
Identities = 92/109 (84%)
Strand = Plus / Plus
Query: 1137 ccaggacacgctgtacgtgcacgcgcggcggcagttcttccgcaactgcgtggtctccgg 1196
||||||||| || ||||||||| ||| ||||||||||||||| | |||| ||| |||
Sbjct: 86 ccaggacaccctctacgtgcactcgctccggcagttcttccgcgagtgcgacatctacgg 145
Query: 1197 caccatcgacttcatcttcggcaactcggcggcggtgttccagaactgc 1245
||||||||||||| ||||||||||||| || || ||| |||||| ||||
Sbjct: 146 caccatcgacttcgtcttcggcaactccgccgccgtgctccagagctgc 194
>gb|AL808409.1|AL808409 AL808409 a:22 Triticum aestivum cDNA clone E04_a22_plate_16, mRNA
sequence
Length = 535
Score = 81.8 bits (41), Expect = 2e-013
Identities = 140/173 (80%)
Strand = Plus / Plus
Query: 1068 gcaccaggcggtggcgctccgggtgcagggggacctcgcggcgttctacaactgccggtt 1127
||||||||||||||||||||| || | |||||| ||||||||||| |||| | ||
Sbjct: 361 gcaccaggcggtggcgctccgcgtcggcgccgacctctcggcgttctaccgctgcagctt 420
Query: 1128 cgacgcgttccaggacacgctgtacgtgcacgcgcggcggcagttcttccgcaactgcgt 1187
|| | | ||||||||| || ||||||||| ||| ||||||||||||||| | ||||
Sbjct: 421 cgtgggctaccaggacaccctctacgtgcactcgctccggcagttcttccgcgagtgcga 480
Query: 1188 ggtctccggcaccatcgacttcatcttcggcaactcggcggcggtgttccaga 1240
||| |||||||||||||||| ||||||||||||| || || ||| ||||||
Sbjct: 481 catctacggcaccatcgacttcgtcttcggcaactccgccgccgtgctccaga 533
>gb|BJ250058.1|BJ250058 BJ250058 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf14p02 3', mRNA sequence
Length = 721
Score = 71.9 bits (36), Expect = 2e-010
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1194 cggcaccatcgacttcatcttcggcaactcggcggcggtgttccagaactgc 1245
|||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 639 cggcaccatcgacttcatcttcggcaacgcgcaggtggtgttccagaactgc 588
>gb|CK162455.1|CK162455 FGAS015049 Triticum aestivum FGAS: Library 4 Gate 8 Triticum aestivum
cDNA, mRNA sequence
Length = 1082
Score = 71.9 bits (36), Expect = 2e-010
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1474 gaggggtacatgccctggaacggcgacttcgccctcaagacgctctactacg 1525
||||||| |||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 366 gaggggtggatgccctggagcggcgacttcgcgctcaagacgctctactacg 315
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1137 ccaggacacgctgtacgtgcacgc 1160
||||||||||||||||||||||||
Sbjct: 727 ccaggacacgctgtacgtgcacgc 704
Score = 46.1 bits (23), Expect = 0.009
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1204 gacttcatcttcggcaactcggcggcggtgttcca 1238
|||||| ||||||||||||||||||| ||| ||||
Sbjct: 660 gacttcgtcttcggcaactcggcggccgtgctcca 626
>gb|BJ250042.1|BJ250042 BJ250042 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf14o03 3', mRNA sequence
Length = 706
Score = 69.9 bits (35), Expect = 6e-010
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1193 ccggcaccatcgacttcatcttcggcaactcggcggcggtgttccagaactgcctcatca 1252
||||||||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct: 684 ccggcaccatcgacttcatcttcggcaactcccaggtggtcatccagaactgcctcatcc 625
Query: 1253 tcacgcggcggcccatggacaaccagc 1279
| |||| |||||||||||| ||||
Sbjct: 624 tgccgcgcaagcccatggacaatcagc 598
Score = 60.0 bits (30), Expect = 6e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1489 tggaacggcgacttcgccctcaagacgctctactacgccgag 1530
||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 388 tggaacggcgacttcgccctcgagaccctcttctacgccgag 347
>gb|BJ252439.1|BJ252439 BJ252439 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf24f19 3', mRNA sequence
Length = 668
Score = 69.9 bits (35), Expect = 6e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 1169 agttcttccgcaactgcgtggtctccggcaccatcgacttcatcttcggcaactcggcgg 1228
||||||||||| ||||| || ||||||||||||||||||||||||||||||| ||
Sbjct: 668 agttcttccgcgactgcaccatcaccggcaccatcgacttcatcttcggcaactcccagg 609
Query: 1229 cggtgttccagaactgcctcatc 1251
||| |||||||||||||||||
Sbjct: 608 tggtcatccagaactgcctcatc 586
Score = 69.9 bits (35), Expect = 6e-010
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1193 ccggcaccatcgacttcatcttcggcaactcggcggcggtgttccagaactgcctcatca 1252
||||||||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct: 644 ccggcaccatcgacttcatcttcggcaactcccaggtggtcatccagaactgcctcatcc 585
Query: 1253 tcacgcggcggcccatggacaaccagc 1279
| |||| |||||||||||| ||||
Sbjct: 584 tgccgcgcaagcccatggacaatcagc 558
Score = 60.0 bits (30), Expect = 6e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1489 tggaacggcgacttcgccctcaagacgctctactacgccgag 1530
||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 348 tggaacggcgacttcgccctcgagaccctcttctacgccgag 307
>gb|CK210460.1|CK210460 FGAS022276 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1102
Score = 61.9 bits (31), Expect = 2e-007
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 1068 gcaccaggcggtggcgctccgggtgcagggggacctcgcggcgttctacaactgccggtt 1127
|||||||||||||||||| |||||| | | |||||| |||| |||||| |||| | ||
Sbjct: 425 gcaccaggcggtggcgctgcgggtgaacgcggacctgtcggccttctaccgctgcagctt 484
Query: 1128 cgacgcgttccaggacacgctgtacgtgcacgcgcggcggcagttcttccgcaactgcgt 1187
|| | || |||||||||||| |||| |||| ||| || ||||||| |||| |||| |
Sbjct: 485 cgcggggtaccaggacacgctctacgcgcactcgctccgccagttctaccgcgactgtga 544
Query: 1188 ggtctccggcaccatcgacttcatcttcggc 1218
|||| |||||| | |||||||||||||||
Sbjct: 545 cgtctacggcacagttgacttcatcttcggc 575
Score = 60.0 bits (30), Expect = 6e-007
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1489 tggaacggcgacttcgccctcaagacgctctactacgccgagtacaacaaccgcgggccc 1548
||||||||| |||||| ||| | |||||||||||||||||||||| ||||| ||||||
Sbjct: 846 tggaacggcaccttcgcgctcgacacgctctactacgccgagtacatgaaccg-gggccc 904
Query: 1549 ggcgcc 1554
||||||
Sbjct: 905 ggcgcc 910
>gb|BE425995.1|BE425995 WHE0326_A09_A18ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0326_A09_A18, mRNA
sequence
Length = 518
Score = 60.0 bits (30), Expect = 6e-007
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1168 cagttcttccgcaactgcgtggtctccggcaccatcgacttcatcttcggcaactcggcg 1227
|||||||||||| | |||| ||| |||||||||||||||| ||||||||||||| ||
Sbjct: 114 cagttcttccgcgagtgcgacatctacggcaccatcgacttcgtcttcggcaactccgcc 173
Query: 1228 gcggtgttccagaactgc 1245
|| ||| |||||| ||||
Sbjct: 174 gccgtgctccagagctgc 191
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1068 gcaccaggcggtggcgctccg 1088
|||||||||||||||||||||
Sbjct: 14 gcaccaggcggtggcgctccg 34
>gb|CA628044.1|CA628044 wle1.pk0001.d7 wle1 Triticum aestivum cDNA clone wle1.pk0001.d7 5'
end, mRNA sequence
Length = 535
Score = 60.0 bits (30), Expect = 6e-007
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1168 cagttcttccgcaactgcgtggtctccggcaccatcgacttcatcttcggcaactcggcg 1227
|||||||||||| | |||| ||| |||||||||||||||| ||||||||||||| ||
Sbjct: 202 cagttcttccgcgagtgcgacatctacggcaccatcgacttcgtcttcggcaactccgcc 261
Query: 1228 gcggtgttccagaactgc 1245
|| ||| |||||| ||||
Sbjct: 262 gccgtgctccagagctgc 279
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1068 gcaccaggcggtggcgctccg 1088
|||||||||||||||||||||
Sbjct: 102 gcaccaggcggtggcgctccg 122
>gb|CA604573.1|CA604573 wr1.pk0041.c12 wr1 Triticum aestivum cDNA clone wr1.pk0041.c12 5'
end, mRNA sequence
Length = 602
Score = 56.0 bits (28), Expect = 1e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1513 acgctctactacgccgagtacaacaaccgcgggcccggcgccggcacc 1560
||||||||||| ||||||||||||||| |||||| ||||||| ||||
Sbjct: 244 acgctctactatgccgagtacaacaactccgggccgggcgccgacacc 291
>gb|CA721383.1|CA721383 wdk9n.pk001.p9 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.p9 5'
end, mRNA sequence
Length = 482
Score = 54.0 bits (27), Expect = 4e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1513 acgctctactacgccgagtacaacaaccgcgggcccggcgccggcac 1559
||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 190 acgctctactacgccgagtaccagaacacggggcccggcgccggcac 236
>gb|CB307163.1|CB307163 HFIG148 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 540
Score = 54.0 bits (27), Expect = 4e-005
Identities = 120/151 (79%)
Strand = Plus / Plus
Query: 1068 gcaccaggcggtggcgctccgggtgcagggggacctcgcggcgttctacaactgccggtt 1127
|||||||||||||||||| |||||| | | ||||| | || |||||| |||| | ||
Sbjct: 66 gcaccaggcggtggcgctacgggtgaacgccgacctgtccgccttctaccgctgcagctt 125
Query: 1128 cgacgcgttccaggacacgctgtacgtgcacgcgcggcggcagttcttccgcaactgcgt 1187
|| | || |||||||||||| |||| |||| ||| || ||||||| |||| ||||||
Sbjct: 126 cgcggggtaccaggacacgctctacgcgcactcgctccgccagttctaccgcgactgcga 185
Query: 1188 ggtctccggcaccatcgacttcatcttcggc 1218
|||| ||||||| |||| ||| ||||||||
Sbjct: 186 cgtctacggcaccgtcgatttcgtcttcggc 216
Score = 52.0 bits (26), Expect = 1e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1489 tggaacggcgacttcgccctcaagacgctctactacgccgagtaca 1534
||||||||| |||||| ||| | ||||||||||||||||||||||
Sbjct: 486 tggaacggcaccttcgcgctcgacacgctctactacgccgagtaca 531
>gb|BE442559.1|BE442559 WHE1103_D06_H11ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1103_D06_H11,
mRNA sequence
Length = 347
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1498 gacttcgccctcaagacgctctactacgccgagtacaa 1535
|||||||| ||| | |||||||||||||||||||||||
Sbjct: 13 gacttcgcgctcgacacgctctactacgccgagtacaa 50
>gb|AL822121.1|AL822121 AL822121 p:234 Triticum aestivum cDNA clone A09_p234_plate_20_run_2,
mRNA sequence
Length = 576
Score = 52.0 bits (26), Expect = 1e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1498 gacttcgccctcaagacgctctactacgccgagtacaacaac 1539
|||||||| ||| | ||||||||||||||| |||||||||||
Sbjct: 473 gacttcgcgctcgacacgctctactacgcctagtacaacaac 514
Score = 44.1 bits (22), Expect = 0.036
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1068 gcaccaggcggtggcgctccgg 1089
||||||||||||||||||||||
Sbjct: 41 gcaccaggcggtggcgctccgg 62
>gb|CD452428.1|CD452428 WHE1103_D06_H11ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1103_D06_H11,
mRNA sequence
Length = 357
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1498 gacttcgccctcaagacgctctactacgccgagtacaa 1535
|||||||| ||| | |||||||||||||||||||||||
Sbjct: 335 gacttcgcgctcgacacgctctactacgccgagtacaa 298
>gb|CD878081.1|CD878081 AZO4.101N22R011122 AZO4 Triticum aestivum cDNA clone AZO4101N22, mRNA
sequence
Length = 621
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1498 gacttcgccctcaagacgctctactacgccgagtacaa 1535
|||||||| ||| | |||||||||||||||||||||||
Sbjct: 477 gacttcgcgctcgacacgctctactacgccgagtacaa 440
>emb|AX660696.1| Sequence 1053 from Patent WO03000906
Length = 573
Score = 50.1 bits (25), Expect = 6e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1498 gacttcgccctcaagacgctctactacgccgagtaca 1534
|||||||| ||| | ||||||||||||||||||||||
Sbjct: 252 gacttcgcgctcgacacgctctactacgccgagtaca 288
>gb|CA599582.1|CA599582 waw1c.pk003.e20 waw1c Triticum aestivum cDNA clone waw1c.pk003.e20 5'
end, mRNA sequence
Length = 648
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1137 ccaggacacgctgtacgtgcacgc 1160
||||||||||||||||||||||||
Sbjct: 313 ccaggacacgctgtacgtgcacgc 336
>gb|CV777756.1|CV777756 FGAS072163 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 819
Score = 48.1 bits (24), Expect = 0.002
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 1500 cttcgccctcaagacgctctactacgccgagtacaacaaccgcgggcccggcgccggcac 1559
|||||| ||| | ||||| ||||||||||||||| | ||| |||||||||||||||||
Sbjct: 587 cttcgcgctcgacacgctatactacgccgagtaccagaacacggggcccggcgccggcac 528
>gb|CA728456.1|CA728456 wdi1c.pk004.m18 wdi1c Triticum aestivum cDNA clone wdi1c.pk004.m18 5'
end, mRNA sequence
Length = 633
Score = 46.1 bits (23), Expect = 0.009
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1199 ccatcgacttcatcttcggcaac 1221
|||||||||||||||||||||||
Sbjct: 352 ccatcgacttcatcttcggcaac 374
>gb|BQ483659.1|BQ483659 WHE3511_B04_D07ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3511_B04_D07, mRNA sequence
Length = 610
Score = 44.1 bits (22), Expect = 0.036
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1750 cgctcgcgcgcgcgcacacaca 1771
||||||||||||||||||||||
Sbjct: 55 cgctcgcgcgcgcgcacacaca 34
>gb|BQ806129.1|BQ806129 WHE3575_B07_C13ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3575_B07_C13, mRNA sequence
Length = 707
Score = 44.1 bits (22), Expect = 0.036
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1190 tctccggcaccatcgacttcatcttcggcaactc 1223
|||||||||| | ||||||||||||||||||||
Sbjct: 62 tctccggcacggtggacttcatcttcggcaactc 95
>gb|BJ279797.1|BJ279797 BJ279797 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr4m20 5', mRNA sequence
Length = 432
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1751 gctcgcgcgcgcgcacacaca 1771
|||||||||||||||||||||
Sbjct: 277 gctcgcgcgcgcgcacacaca 257
>gb|BJ284780.1|BJ284780 BJ284780 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr4m20 3', mRNA sequence
Length = 356
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1751 gctcgcgcgcgcgcacacaca 1771
|||||||||||||||||||||
Sbjct: 96 gctcgcgcgcgcgcacacaca 116
>gb|BJ303490.1|BJ303490 BJ303490 Y. Ogihara unpublished cDNA library, Wh_yd Triticum aestivum
cDNA clone whyd19m22 5', mRNA sequence
Length = 689
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1199 ccatcgacttcatcttcggca 1219
|||||||||||||||||||||
Sbjct: 82 ccatcgacttcatcttcggca 102
>gb|BJ309363.1|BJ309363 BJ309363 Y. Ogihara unpublished cDNA library, Wh_yd Triticum aestivum
cDNA clone whyd19m22 3', mRNA sequence
Length = 661
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1199 ccatcgacttcatcttcggca 1219
|||||||||||||||||||||
Sbjct: 589 ccatcgacttcatcttcggca 569
>gb|CA633567.1|CA633567 wle1n.pk0075.h10 wle1n Triticum aestivum cDNA clone wle1n.pk0075.h10
5' end, mRNA sequence
Length = 702
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1068 gcaccaggcggtggcgctccg 1088
|||||||||||||||||||||
Sbjct: 125 gcaccaggcggtggcgctccg 145
>gb|AL808414.1|AL808414 AL808414 a:22 Triticum aestivum cDNA clone F02_a22_plate_16, mRNA
sequence
Length = 279
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1068 gcaccaggcggtggcgctccg 1088
|||||||||||||||||||||
Sbjct: 256 gcaccaggcggtggcgctccg 276
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative
chromosome condensation factor (CCF), putative resistance
protein (RGA-2), putative resistance protein (RGA2) and
putative nodulin-like-like protein (NLL) gene, complete
cds; and retrotransposons Josephine, Angela-2, Angela-4,
Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6,
Angela-5, Barbara, Isabelle, Erika-2, and Claudia
Length = 211009
Score = 42.1 bits (21), Expect = 0.14
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1744 cacacacgctcgcgcgcgcgcacacacat 1772
||||||| | |||||||||||||||||||
Sbjct: 8166 cacacacacacgcgcgcgcgcacacacat 8138
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 600,647
Number of Sequences: 636343
Number of extensions: 600647
Number of successful extensions: 175680
Number of sequences better than 0.5: 51
Number of HSP's better than 0.5 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 175423
Number of HSP's gapped (non-prelim): 211
length of query: 1967
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1947
effective length of database: 354,513,379
effective search space: 690237548913
effective search space used: 690237548913
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)