BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3977955.2.1
(867 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ250042.1|BJ250042 BJ250042 Y. Ogihara unpublished cDNA... 337 8e-091
gb|BJ252439.1|BJ252439 BJ252439 Y. Ogihara unpublished cDNA... 337 8e-091
gb|BJ250058.1|BJ250058 BJ250058 Y. Ogihara unpublished cDNA... 127 1e-027
gb|CA593973.1|CA593973 wpa1c.pk004.c19 wpa1c Triticum aesti... 84 2e-014
gb|BJ249964.1|BJ249964 BJ249964 Y. Ogihara unpublished cDNA... 80 3e-013
gb|BJ243936.1|BJ243936 BJ243936 Y. Ogihara unpublished cDNA... 78 1e-012
gb|BJ245820.1|BJ245820 BJ245820 Y. Ogihara unpublished cDNA... 78 1e-012
gb|BJ249108.1|BJ249108 BJ249108 Y. Ogihara unpublished cDNA... 78 1e-012
gb|BJ255363.1|BJ255363 BJ255363 Y. Ogihara unpublished cDNA... 78 1e-012
gb|BJ244140.1|BJ244140 BJ244140 Y. Ogihara unpublished cDNA... 70 3e-010
gb|BJ249930.1|BJ249930 BJ249930 Y. Ogihara unpublished cDNA... 70 3e-010
gb|BJ248171.1|BJ248171 BJ248171 Y. Ogihara unpublished cDNA... 68 1e-009
gb|BJ250225.1|BJ250225 BJ250225 Y. Ogihara unpublished cDNA... 64 2e-008
gb|BE606718.1|BE606718 WHE0907_G06_N11ZS Wheat 5-15 DAP spi... 58 1e-006
gb|BJ248423.1|BJ248423 BJ248423 Y. Ogihara unpublished cDNA... 58 1e-006
gb|AL808409.1|AL808409 AL808409 a:22 Triticum aestivum cDNA... 58 1e-006
gb|BJ251252.1|BJ251252 BJ251252 Y. Ogihara unpublished cDNA... 56 4e-006
gb|BJ251281.1|BJ251281 BJ251281 Y. Ogihara unpublished cDNA... 56 4e-006
gb|BJ251714.1|BJ251714 BJ251714 Y. Ogihara unpublished cDNA... 56 4e-006
gb|BJ285920.1|BJ285920 BJ285920 Y. Ogihara unpublished cDNA... 56 4e-006
gb|BE425995.1|BE425995 WHE0326_A09_A18ZS Wheat unstressed s... 54 2e-005
gb|CA628044.1|CA628044 wle1.pk0001.d7 wle1 Triticum aestivu... 54 2e-005
gb|BJ213611.1|BJ213611 BJ213611 Y. Ogihara unpublished cDNA... 52 7e-005
gb|CA728456.1|CA728456 wdi1c.pk004.m18 wdi1c Triticum aesti... 46 0.004
gb|CB307163.1|CB307163 HFIG148 Hessian fly infested cDNA li... 46 0.004
gb|CK162455.1|CK162455 FGAS015049 Triticum aestivum FGAS: L... 46 0.004
gb|CK210460.1|CK210460 FGAS022276 Triticum aestivum FGAS: L... 46 0.004
gb|BJ303490.1|BJ303490 BJ303490 Y. Ogihara unpublished cDNA... 42 0.063
gb|BJ309363.1|BJ309363 BJ309363 Y. Ogihara unpublished cDNA... 42 0.063
gb|BQ806129.1|BQ806129 WHE3575_B07_C13ZS Wheat developing g... 42 0.063
gb|BQ240650.1|BQ240650 TaE05014F09R TaE05 Triticum aestivum... 40 0.25
>gb|BJ250042.1|BJ250042 BJ250042 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14o03 3', mRNA sequence
Length = 706
Score = 337 bits (170), Expect = 8e-091
Identities = 260/290 (89%)
Strand = Plus / Plus
Query: 289 cccgggatgaacggcaccccgaacttggggatgaactgctgcccctggatgaaggtctcc 348
||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||| ||
Sbjct: 189 cccgggatgaagggcacgccgtacttggggatgaactgctcgccctggatgaaggcttcg 248
Query: 349 acggtgaactccttctgcgcctcctcgtaggtgacggtcttgatgcctccccacttggcg 408
|||||| ||||||||||||| || |||||||||| ||||||||||| ||||||||||||
Sbjct: 249 acggtgtactccttctgcgcgtcggcgtaggtgacagtcttgatgccgccccacttggcg 308
Query: 409 cgcttgctcatgtcggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcg 468
|||| |||||||||||||||| ||| ||| |||||||| ||||||||||| ||||||
Sbjct: 309 cgctggctcatgtcggcgccgggcccggtgttctccacctcggcgtagaagagggtctcg 368
Query: 469 aggccgaagtcgccgttccactcgagccagcccttggggtcgatgaagccgccgatgtcg 528
||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 369 agggcgaagtcgccgttccactcgagccagcccttggggtcgatgaaggcgccgatctcg 428
Query: 529 ttctggatgtagatcgtccgggagtactccttccagggccgcgccaggta 578
|||||||||||||| |||| ||||||||||||||| || |||||||||||
Sbjct: 429 ttctggatgtagatggtcctggagtactccttccatgggcgcgccaggta 478
Score = 170 bits (86), Expect = 1e-040
Identities = 176/206 (85%)
Strand = Plus / Plus
Query: 604 tccttgaagtccgggtggggctcgatggtgcagttgtgcagcacggtgccgcccacggag 663
||||||||||| ||||| |||||||||||| |||||||| |||||||| || ||||||
Sbjct: 501 tccttgaagtcggggtgcggctcgatggtgttgttgtgcatgacggtgcccccgacggag 560
Query: 664 cgcttgtcccgccgcccctgcgccgtgatgatgttggcctggttcgccatgggcttccgg 723
||||| || || ||||| ||||| |||||||||||| ||| || |||||||||| ||
Sbjct: 561 cgcttctcgcggcgcccttgcgcggtgatgatgttgagctgattgtccatgggcttgcgc 620
Query: 724 ggctggatcaggcagttctgcagcaccacctgggagttgccgaagatgaagtcgatggtg 783
||| |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggcaggatgaggcagttctggatgaccacctgggagttgccgaagatgaagtcgatggtg 680
Query: 784 ccggtcacccggcagtcgcggaagaa 809
||||| | |||||||||||||||
Sbjct: 681 ccggtgatggtgcagtcgcggaagaa 706
>gb|BJ252439.1|BJ252439 BJ252439 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24f19 3', mRNA sequence
Length = 668
Score = 337 bits (170), Expect = 8e-091
Identities = 260/290 (89%)
Strand = Plus / Plus
Query: 289 cccgggatgaacggcaccccgaacttggggatgaactgctgcccctggatgaaggtctcc 348
||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||| ||
Sbjct: 149 cccgggatgaagggcacgccgtacttggggatgaactgctcgccctggatgaaggcttcg 208
Query: 349 acggtgaactccttctgcgcctcctcgtaggtgacggtcttgatgcctccccacttggcg 408
|||||| ||||||||||||| || |||||||||| ||||||||||| ||||||||||||
Sbjct: 209 acggtgtactccttctgcgcgtcggcgtaggtgacagtcttgatgccgccccacttggcg 268
Query: 409 cgcttgctcatgtcggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcg 468
|||| |||||||||||||||| ||| ||| |||||||| ||||||||||| ||||||
Sbjct: 269 cgctggctcatgtcggcgccgggcccggtgttctccacctcggcgtagaagagggtctcg 328
Query: 469 aggccgaagtcgccgttccactcgagccagcccttggggtcgatgaagccgccgatgtcg 528
||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 329 agggcgaagtcgccgttccactcgagccagcccttggggtcgatgaaggcgccgatctcg 388
Query: 529 ttctggatgtagatcgtccgggagtactccttccagggccgcgccaggta 578
|||||||||||||| |||| ||||||||||||||| || |||||||||||
Sbjct: 389 ttctggatgtagatggtcctggagtactccttccatgggcgcgccaggta 438
Score = 174 bits (88), Expect = 7e-042
Identities = 178/208 (85%)
Strand = Plus / Plus
Query: 604 tccttgaagtccgggtggggctcgatggtgcagttgtgcagcacggtgccgcccacggag 663
||||||||||| ||||| |||||||||||| |||||||| |||||||| || ||||||
Sbjct: 461 tccttgaagtcggggtgcggctcgatggtgttgttgtgcatgacggtgcccccgacggag 520
Query: 664 cgcttgtcccgccgcccctgcgccgtgatgatgttggcctggttcgccatgggcttccgg 723
||||| || || ||||| ||||| |||||||||||| ||| || |||||||||| ||
Sbjct: 521 cgcttctcgcggcgcccttgcgcggtgatgatgttgagctgattgtccatgggcttgcgc 580
Query: 724 ggctggatcaggcagttctgcagcaccacctgggagttgccgaagatgaagtcgatggtg 783
||| |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggcaggatgaggcagttctggatgaccacctgggagttgccgaagatgaagtcgatggtg 640
Query: 784 ccggtcacccggcagtcgcggaagaact 811
||||| | |||||||||||||||||
Sbjct: 641 ccggtgatggtgcagtcgcggaagaact 668
>gb|BJ250058.1|BJ250058 BJ250058 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14p02 3', mRNA sequence
Length = 721
Score = 127 bits (64), Expect = 1e-027
Identities = 202/248 (81%)
Strand = Plus / Plus
Query: 607 ttgaagtccgggtggggctcgatggtgcagttgtgcagcacggtgccgcccacggagcgc 666
||||| |||| ||| |||||||||||||||||||| | ||| ||||||| | ||| ||
Sbjct: 460 ttgaactccgcgtgcggctcgatggtgcagttgtggatgacgatgccgccggccgagtgc 519
Query: 667 ttgtcccgccgcccctgcgccgtgatgatgttggcctggttcgccatgggcttccggggc 726
| ||| ||||||||||||||||||||||| ||||||| ||||| ||| || |
Sbjct: 520 ctctccttgcgcccctgcgccgtgatgatgttctgctggttctccatgcacttgcgcacc 579
Query: 727 tggatcaggcagttctgcagcaccacctgggagttgccgaagatgaagtcgatggtgccg 786
|||| | ||||||||| | ||||||||| | ||||||||||||||||||||||||||||
Sbjct: 580 tggaggatgcagttctggaacaccacctgcgcgttgccgaagatgaagtcgatggtgccg 639
Query: 787 gtcacccggcagtcgcggaagaactgccgctgcgcgtgcgtgtacagcgtgtcctggtag 846
|||| |||||| ||| || ||||||| || ||||||||| ||||||||||||||
Sbjct: 640 ctcacggtgcagtctcggtagtactgccggctcgtgtgcgtgtagagcgtgtcctggtac 699
Query: 847 ccgtcgaa 854
||||||||
Sbjct: 700 ccgtcgaa 707
Score = 79.8 bits (40), Expect = 3e-013
Identities = 247/316 (78%)
Strand = Plus / Plus
Query: 271 tgctcctgcggcagcaatcccgggatgaacggcaccccgaacttggggatgaactgctgc 330
||||||||||||||||| ||||||||||| ||||| ||| |||||| ||| | ||| |
Sbjct: 127 tgctcctgcggcagcaaccccgggatgaagggcacgccgtacttggagatccagagcttc 186
Query: 331 ccctggatgaaggtctccacggtgaactccttctgcgcctcctcgtaggtgacggtcttg 390
||||||||||| ||||||||||| ||| || | ||||| | |||||| ||| ||||
Sbjct: 187 ccctggatgaacctctccacggtgtacttctcttccgcctgccggtaggtcacgtgcttg 246
Query: 391 atgcctccccacttggcgcgcttgctcatgtcggcgccgtcgccgcggttgtccacctcc 450
| ||| |||| || |||| |||||||||||||| || || ||||||||||||||
Sbjct: 247 acgcccttccacgtgacgcggttgctcatgtcggcccccggcccccggttgtccacctcg 306
Query: 451 gcgtagaagagcgtctcgaggccgaagtcgccgttccactcgagccagcccttggggtcg 510
|||||| || || ||| ||||||||||| |||| ||||| |||| ||||||
Sbjct: 307 gcgtagtagcaggtgctgagcgcgaagtcgccgagccacggcagccacccctgcgggtcg 366
Query: 511 atgaagccgccgatgtcgttctggatgtagatcgtccgggagtactccttccagggccgc 570
|| | | ||||||| || ||||||||||| || ||||||| ||||||||| ||||||
Sbjct: 367 atcaggtcgccgatctccgactggatgtagagggtgcgggagtgctccttccacggccgc 426
Query: 571 gccaggtacgtgcgga 586
||||| |||| ||||
Sbjct: 427 cccaggaacgtccgga 442
>gb|CA593973.1|CA593973 wpa1c.pk004.c19 wpa1c Triticum aestivum cDNA clone wpa1c.pk004.c19
5' end, mRNA sequence
Length = 534
Score = 83.8 bits (42), Expect = 2e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 757 gagttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccgc 816
||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 155 gagttgccgaagatgaagtcgatggtgcccaacacctcgcagttgcggaagaactgccgg 96
Query: 817 tgcgcgtgcgtgtacagcgtgtcctggtagccgtcgaa 854
| |||||| |||||| ||||||||||| || |||||
Sbjct: 95 ttggcgtgcacgtacagggtgtcctggtacccctcgaa 58
Score = 50.1 bits (25), Expect = 3e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 767 agatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccg 815
||||||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 52 agatgaagtcgatggtgcccaacacctcgcagttgcggaagaactgccg 4
>gb|BJ249964.1|BJ249964 BJ249964 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14j03 3', mRNA sequence
Length = 529
Score = 79.8 bits (40), Expect = 3e-013
Identities = 247/316 (78%)
Strand = Plus / Plus
Query: 271 tgctcctgcggcagcaatcccgggatgaacggcaccccgaacttggggatgaactgctgc 330
||||||||||||||||| ||||||||||| ||||| ||| |||||| ||| | ||| |
Sbjct: 63 tgctcctgcggcagcaaccccgggatgaagggcacgccgtacttggagatccagagcttc 122
Query: 331 ccctggatgaaggtctccacggtgaactccttctgcgcctcctcgtaggtgacggtcttg 390
||||||||||| ||||||||||| ||| || | ||||| | |||||| ||| ||||
Sbjct: 123 ccctggatgaacctctccacggtgtacttctcttccgcctgccggtaggtcacgtgcttg 182
Query: 391 atgcctccccacttggcgcgcttgctcatgtcggcgccgtcgccgcggttgtccacctcc 450
| ||| |||| || |||| |||||||||||||| || || ||||||||||||||
Sbjct: 183 acgcccttccacgtgacgcggttgctcatgtcggcccccggcccccggttgtccacctcg 242
Query: 451 gcgtagaagagcgtctcgaggccgaagtcgccgttccactcgagccagcccttggggtcg 510
|||||| || || ||| ||||||||||| |||| ||||| |||| ||||||
Sbjct: 243 gcgtagtagcaggtgctgagcgcgaagtcgccgagccacggcagccacccctgcgggtcg 302
Query: 511 atgaagccgccgatgtcgttctggatgtagatcgtccgggagtactccttccagggccgc 570
|| | | ||||||| || ||||||||||| || ||||||| ||||||||| ||||||
Sbjct: 303 atcaggtcgccgatctccgactggatgtagagggtgcgggagtgctccttccacggccgc 362
Query: 571 gccaggtacgtgcgga 586
||||| |||| ||||
Sbjct: 363 cccaggaacgtccgga 378
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 676 cgcccctgcgccgtgatgatgtt 698
|||||||||||||||||||||||
Sbjct: 466 cgcccctgcgccgtgatgatgtt 488
>gb|BJ243936.1|BJ243936 BJ243936 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13h13 5', mRNA sequence
Length = 582
Score = 77.8 bits (39), Expect = 1e-012
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 757 gagttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccgc 816
||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||
Sbjct: 228 gagttgccgaagatgaagtcgatggtgccggagatgacgcagttgcggaagaactggcgc 169
Query: 817 tgcgcgtgcgtgtacagcgtgtcctgg 843
| |||||| ||||||||||||||||
Sbjct: 168 cgggcgtgcacgtacagcgtgtcctgg 142
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 422 cggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcgaggccgaagtcgc 481
|||||||| |||||||||| | | ||| |||||| ||||||||| ||| |||||||||
Sbjct: 560 cggcgccggggccgcggttgccgaactcggcgtagtagagcgtcttgagcgcgaagtcgc 501
Query: 482 cgttccac 489
||||||||
Sbjct: 500 cgttccac 493
>gb|BJ245820.1|BJ245820 BJ245820 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf20e17 5', mRNA sequence
Length = 665
Score = 77.8 bits (39), Expect = 1e-012
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 757 gagttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccgc 816
||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||
Sbjct: 417 gagttgccgaagatgaagtcgatggtgccggagatgacgcagttgcggaagaactggcgc 358
Query: 817 tgcgcgtgcgtgtacagcgtgtcctgg 843
| |||||| ||||||||||||||||
Sbjct: 357 cgggcgtgcacgtacagcgtgtcctgg 331
>gb|BJ249108.1|BJ249108 BJ249108 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23g24 5', mRNA sequence
Length = 430
Score = 77.8 bits (39), Expect = 1e-012
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 271 tgctcctgcggcagcaatcccgggatgaacggcaccccgaacttggggatgaactgctgc 330
||||||||||||||||| ||||||||||| ||||| ||| |||||| ||| | ||| |
Sbjct: 291 tgctcctgcggcagcaaccccgggatgaagggcacgccgtacttggagatccagagcttc 232
Query: 331 ccctggatgaaggtctccacggtgaactccttctgcgcctcctcgtaggtgacggtcttg 390
||||||||||| ||||||| ||| ||| || ||||||| | |||||||||| ||||
Sbjct: 231 ccctggatgaacctctccacagtgtacttctcttgcgcctgccggtaggtgacgtgcttg 172
Query: 391 atgcctccccacttggcgcgcttgctcatgtcggc 425
| ||| |||| || |||| ||||||||||||||
Sbjct: 171 acgcccttccacgtgacgcgattgctcatgtcggc 137
>gb|BJ255363.1|BJ255363 BJ255363 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23g24 3', mRNA sequence
Length = 505
Score = 77.8 bits (39), Expect = 1e-012
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 271 tgctcctgcggcagcaatcccgggatgaacggcaccccgaacttggggatgaactgctgc 330
||||||||||||||||| ||||||||||| ||||| ||| |||||| ||| | ||| |
Sbjct: 251 tgctcctgcggcagcaaccccgggatgaagggcacgccgtacttggagatccagagcttc 310
Query: 331 ccctggatgaaggtctccacggtgaactccttctgcgcctcctcgtaggtgacggtcttg 390
||||||||||| ||||||| ||| ||| || ||||||| | |||||||||| ||||
Sbjct: 311 ccctggatgaacctctccacagtgtacttctcttgcgcctgccggtaggtgacgtgcttg 370
Query: 391 atgcctccccacttggcgcgcttgctcatgtcggc 425
| ||| |||| || |||| ||||||||||||||
Sbjct: 371 acgcccttccacgtgacgcgattgctcatgtcggc 405
>gb|BJ244140.1|BJ244140 BJ244140 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14g15 5', mRNA sequence
Length = 591
Score = 69.9 bits (35), Expect = 3e-010
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 757 gagttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccgc 816
||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||
Sbjct: 262 gagttgccgaagatgaagtcgatggtgccggagatgacgcagttgcggaagaactggcgc 203
Query: 817 tgcgcgtgcgtgtacagcgtgtcctgg 843
| |||||| |||||||||||||||
Sbjct: 202 cgggcgtgcacatacagcgtgtcctgg 176
Score = 63.9 bits (32), Expect = 2e-008
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 422 cggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcgaggccgaagtcgc 481
|||||||| |||||||||| | | ||| |||||| ||||||||| ||| ||||||||||
Sbjct: 492 cggcgccggggccgcggttgccgaactcggcgtagtagagcgtcttgagcccgaagtcgc 433
Query: 482 cgttccac 489
||||||||
Sbjct: 432 cgttccac 425
>gb|BJ249930.1|BJ249930 BJ249930 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14g15 3', mRNA sequence
Length = 712
Score = 69.9 bits (35), Expect = 3e-010
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 757 gagttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccgc 816
||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||
Sbjct: 599 gagttgccgaagatgaagtcgatggtgccggagatgacgcagttgcggaagaactggcgc 658
Query: 817 tgcgcgtgcgtgtacagcgtgtcctgg 843
| |||||| |||||||||||||||
Sbjct: 659 cgggcgtgcacatacagcgtgtcctgg 685
Score = 63.9 bits (32), Expect = 2e-008
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 422 cggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcgaggccgaagtcgc 481
|||||||| |||||||||| | | ||| |||||| ||||||||| ||| ||||||||||
Sbjct: 368 cggcgccggggccgcggttgccgaactcggcgtagtagagcgtcttgagcccgaagtcgc 427
Query: 482 cgttccac 489
||||||||
Sbjct: 428 cgttccac 435
>gb|BJ248171.1|BJ248171 BJ248171 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf5d01 5', mRNA sequence
Length = 254
Score = 67.9 bits (34), Expect = 1e-009
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 733 aggcagttctgcagcaccacctgggagttgccgaagatgaagtcgatggtgccggtcacc 792
||||||||||| | |||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 93 aggcagttctggaacaccgccgccgagttgccgaagatgaagtcgatggtgcccaacacc 34
Query: 793 cggcagtcgcggaagaactgcc 814
||||| ||||||||||||||
Sbjct: 33 tcgcagttgcggaagaactgcc 12
>gb|BJ250225.1|BJ250225 BJ250225 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9k15 3', mRNA sequence
Length = 701
Score = 63.9 bits (32), Expect = 2e-008
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 422 cggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcgaggccgaagtcgc 481
|||||||| |||||||||| | | ||| |||||| ||||||||| ||| ||||||||||
Sbjct: 379 cggcgccggggccgcggttgccgaactcggcgtagtagagcgtcttgagcccgaagtcgc 438
Query: 482 cgttccac 489
||||||||
Sbjct: 439 cgttccac 446
>gb|BE606718.1|BE606718 WHE0907_G06_N11ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0907_G06_N11, mRNA sequence
Length = 479
Score = 58.0 bits (29), Expect = 1e-006
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 756 ggagttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccg 815
|||||||||||||| |||||||||||||||| | ||| |||||||||||||||||
Sbjct: 173 ggagttgccgaagacgaagtcgatggtgccgtagatgtcgcactcgcggaagaactgccg 114
Query: 816 ctgcgcgtgcgtgtacagcgtgtcctggtagcc 848
||| |||| ||| || ||||||||||||||
Sbjct: 113 gagcgagtgcacgtagagggtgtcctggtagcc 81
>gb|BJ248423.1|BJ248423 BJ248423 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf6d01 5', mRNA sequence
Length = 276
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 733 aggcagttctgcagcaccacctgggagttgccgaagatgaagtcgatggtgcc 785
||||||||||| | |||| || |||||||||||||||||||||||||||||
Sbjct: 59 aggcagttctggaacaccgccgccgagttgccgaagatgaagtcgatggtgcc 7
>gb|AL808409.1|AL808409 AL808409 a:22 Triticum aestivum cDNA clone E04_a22_plate_16, mRNA
sequence
Length = 535
Score = 58.0 bits (29), Expect = 1e-006
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 756 ggagttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccg 815
|||||||||||||| |||||||||||||||| | ||| |||||||||||||||||
Sbjct: 517 ggagttgccgaagacgaagtcgatggtgccgtagatgtcgcactcgcggaagaactgccg 458
Query: 816 ctgcgcgtgcgtgtacagcgtgtcctggtagcc 848
||| |||| ||| || ||||||||||||||
Sbjct: 457 gagcgagtgcacgtagagggtgtcctggtagcc 425
>gb|BJ251252.1|BJ251252 BJ251252 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19e14 3', mRNA sequence
Length = 613
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 422 cggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcgaggccgaagtcgc 481
|||||||| |||||||||| | | ||| |||||| ||||||||| ||| |||||||||
Sbjct: 336 cggcgccggggccgcggttgccgaactcggcgtagtagagcgtcttgagcgcgaagtcgc 395
Query: 482 cgttccac 489
||||||||
Sbjct: 396 cgttccac 403
>gb|BJ251281.1|BJ251281 BJ251281 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19g21 3', mRNA sequence
Length = 576
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 422 cggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcgaggccgaagtcgc 481
|||||||| |||| ||||| | | ||| |||||| ||||||||| ||| ||||||||||
Sbjct: 349 cggcgccggggccgtggttgccgaactcggcgtagtagagcgtcttgagcccgaagtcgc 408
Query: 482 cgttccac 489
||||||||
Sbjct: 409 cgttccac 416
>gb|BJ251714.1|BJ251714 BJ251714 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf20e17 3', mRNA sequence
Length = 632
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 422 cggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcgaggccgaagtcgc 481
|||||||| |||||||||| | | ||| |||||| ||||||||| ||| |||||||||
Sbjct: 347 cggcgccggggccgcggttgccgaactcggcgtagtagagcgtcttgagcgcgaagtcgc 406
Query: 482 cgttccac 489
||||||||
Sbjct: 407 cgttccac 414
>gb|BJ285920.1|BJ285920 BJ285920 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13h13 3', mRNA sequence
Length = 697
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 422 cggcgccgtcgccgcggttgtccacctccgcgtagaagagcgtctcgaggccgaagtcgc 481
|||||||| |||||||||| | | ||| |||||| ||||||||| ||| |||||||||
Sbjct: 375 cggcgccggggccgcggttgccgaactcggcgtagtagagcgtcttgagcgcgaagtcgc 434
Query: 482 cgttccac 489
||||||||
Sbjct: 435 cgttccac 442
>gb|BE425995.1|BE425995 WHE0326_A09_A18ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0326_A09_A18, mRNA
sequence
Length = 518
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 756 ggagttgccgaagatgaagtcgatggtgccg 786
|||||||||||||| ||||||||||||||||
Sbjct: 170 ggagttgccgaagacgaagtcgatggtgccg 140
>gb|CA628044.1|CA628044 wle1.pk0001.d7 wle1 Triticum aestivum cDNA clone wle1.pk0001.d7 5'
end, mRNA sequence
Length = 535
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 756 ggagttgccgaagatgaagtcgatggtgccg 786
|||||||||||||| ||||||||||||||||
Sbjct: 258 ggagttgccgaagacgaagtcgatggtgccg 228
>gb|BJ213611.1|BJ213611 BJ213611 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh23f23 5', mRNA sequence
Length = 361
Score = 52.0 bits (26), Expect = 7e-005
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 759 gttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccgctg 818
||||||||||| |||||||| ||||| || || ||| |||||| ||||||| || |
Sbjct: 213 gttgccgaagacgaagtcgacagtgccagtgacgttgcaatcgcggtagaactggcgaag 154
Query: 819 cgcgtgcgtgtacagcgtgtcctggtagccgtcgaagg 856
|| ||||| ||| ||||||||||||| ||| |||||||
Sbjct: 153 cgagtgcgcgtaaagcgtgtcctggtggccctcgaagg 116
>gb|CA728456.1|CA728456 wdi1c.pk004.m18 wdi1c Triticum aestivum cDNA clone wdi1c.pk004.m18
5' end, mRNA sequence
Length = 633
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 759 gttgccgaagatgaagtcgatgg 781
|||||||||||||||||||||||
Sbjct: 374 gttgccgaagatgaagtcgatgg 352
>gb|CB307163.1|CB307163 HFIG148 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 540
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 451 gcgtagaagagcgtctcgaggccgaagtcgccgttccactcgagcca 497
|||||| ||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 523 gcgtagtagagcgtgtcgagcgcgaaggtgccgttccactcgagcca 477
Score = 46.1 bits (23), Expect = 0.004
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 795 gcagtcgcggaagaactgccgctgcgcgtgcgtgtacagcgtgtcctggta 845
|||||||||| ||||||| || ||| ||||| ||| ||||||||||||||
Sbjct: 183 gcagtcgcggtagaactggcggagcgagtgcgcgtagagcgtgtcctggta 133
>gb|CK162455.1|CK162455 FGAS015049 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1082
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 547 cgggagtactccttccagggccg 569
|||||||||||||||||||||||
Sbjct: 410 cgggagtactccttccagggccg 432
Score = 40.1 bits (20), Expect = 0.25
Identities = 71/88 (80%)
Strand = Plus / Plus
Query: 757 gagttgccgaagatgaagtcgatggtgccggtcacccggcagtcgcggaagaactgccgc 816
||||||||||||| |||||| | ||||||| ||| |||||| | | ||||||| |||
Sbjct: 641 gagttgccgaagacgaagtccaccgtgccggccacgcggcagcgggtgtagaactggcgc 700
Query: 817 tgcgcgtgcgtgtacagcgtgtcctggt 844
|||||| |||||||||||||||||
Sbjct: 701 atggcgtgcacgtacagcgtgtcctggt 728
>gb|CK210460.1|CK210460 FGAS022276 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1102
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 451 gcgtagaagagcgtctcgaggccgaagtcgccgttccactcgagcca 497
|||||| ||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 883 gcgtagtagagcgtgtcgagcgcgaaggtgccgttccactcgagcca 837
Score = 44.1 bits (22), Expect = 0.016
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 796 cagtcgcggaagaactgccgctgcgcgtgcgtgtacagcgtgtcctggta 845
||||||||| ||||||| || ||| ||||| ||| ||||||||||||||
Sbjct: 541 cagtcgcggtagaactggcggagcgagtgcgcgtagagcgtgtcctggta 492
>gb|BJ303490.1|BJ303490 BJ303490 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd19m22 5', mRNA sequence
Length = 689
Score = 42.1 bits (21), Expect = 0.063
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 761 tgccgaagatgaagtcgatgg 781
|||||||||||||||||||||
Sbjct: 102 tgccgaagatgaagtcgatgg 82
>gb|BJ309363.1|BJ309363 BJ309363 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd19m22 3', mRNA sequence
Length = 661
Score = 42.1 bits (21), Expect = 0.063
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 761 tgccgaagatgaagtcgatgg 781
|||||||||||||||||||||
Sbjct: 569 tgccgaagatgaagtcgatgg 589
>gb|BQ806129.1|BQ806129 WHE3575_B07_C13ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3575_B07_C13, mRNA sequence
Length = 707
Score = 42.1 bits (21), Expect = 0.063
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 756 ggagttgccgaagatgaagtc 776
|||||||||||||||||||||
Sbjct: 96 ggagttgccgaagatgaagtc 76
>gb|BQ240650.1|BQ240650 TaE05014F09R TaE05 Triticum aestivum cDNA clone TaE05014F09R, mRNA
sequence
Length = 498
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 169 ggtgactcgctgaagtgcaggtcc 192
||||||||||||||||| ||||||
Sbjct: 420 ggtgactcgctgaagtgtaggtcc 397
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 225,258
Number of Sequences: 636343
Number of extensions: 225258
Number of successful extensions: 68062
Number of sequences better than 0.5: 31
Number of HSP's better than 0.5 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67969
Number of HSP's gapped (non-prelim): 82
length of query: 867
length of database: 367,240,239
effective HSP length: 19
effective length of query: 848
effective length of database: 355,149,722
effective search space: 301166964256
effective search space used: 301166964256
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)