BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3871923.2.1
(1030 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ615866.1|AJ615866 AJ615866 Triticum turgidum subsp. du... 593 e-167
gb|CN011458.1|CN011458 WHE3884_E06_I12ZS Wheat Fusarium gra... 555 e-156
gb|AJ614344.1|AJ614344 AJ614344 Triticum turgidum subsp. du... 527 e-148
gb|CD897506.1|CD897506 G174.106B19F010823 G174 Triticum aes... 436 e-120
gb|AL821028.1|AL821028 AL821028 O:232 Triticum aestivum cDN... 430 e-119
gb|BM137376.1|BM137376 WHE0463-0466_C01_C01ZS Wheat Fusariu... 424 e-117
gb|CD899788.1|CD899788 G174.113I23F010827 G174 Triticum aes... 383 e-104
gb|BQ166063.1|BQ166063 WHE0807_E11_J21ZT Wheat vernalized c... 373 e-101
gb|CD928017.1|CD928017 GR45.103M13R010608 GR45 Triticum aes... 367 1e-099
gb|CK208464.1|CK208464 FGAS020178 Triticum aestivum FGAS: L... 234 1e-059
gb|BQ161621.1|BQ161621 WHE0463-0466_C01_C01ZT Wheat Fusariu... 228 6e-058
gb|CK208772.1|CK208772 FGAS020491 Triticum aestivum FGAS: L... 228 6e-058
gb|BE585824.1|BE585824 Est#2sp6_B09_b9_073 KSU wheat Fusari... 149 4e-034
gb|AJ603286.1|AJ603286 AJ603286 T06 Triticum aestivum cDNA ... 133 3e-029
gb|CD928016.1|CD928016 GR45.103M13F010315 GR45 Triticum aes... 129 4e-028
gb|BE418655.1|BE418655 SCL072.H12R990528 ITEC SCL Wheat Lea... 117 2e-024
gb|CD884896.1|CD884896 F1.118B23F010510 F1 Triticum aestivu... 46 0.005
gb|BG313979.1|BG313979 WHE2065_D11_H21ZS Wheat salt-stresse... 44 0.019
gb|CV762749.1|CV762749 FGAS057138 Triticum aestivum FGAS: L... 44 0.019
gb|CA730460.1|CA730460 wip1c.pk004.p18 wip1c Triticum aesti... 40 0.30
>gb|AJ615866.1|AJ615866 AJ615866 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 12297R, mRNA
sequence
Length = 682
Score = 593 bits (299), Expect = e-167
Identities = 578/668 (86%), Gaps = 3/668 (0%)
Strand = Plus / Plus
Query: 109 cctggacgtcggcaccaaatacacatccatcctggccagggctgcctgctccgcgttcgt 168
|||||| ||||||||||||||||||||||||||||||||||| || || | || |||||
Sbjct: 16 cctggatgtcggcaccaaatacacatccatcctggccagggcagcatgtgcagcattcgt 75
Query: 169 ctttgggttcgttacgttcatgtccattggaggattcccttcgttcgttgaagaaatgaa 228
|||||| ||||| || |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 76 ctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaaatgaa 135
Query: 229 ggtcttccagcgggaacggctgaacgggcactacggtgtcgcggcgtttgtcatcagcaa 288
||| ||||||||||||||| |||| |||||||||||||| || || |||||||| |||
Sbjct: 136 ggttttccagcgggaacggttgaatgggcactacggtgttgcagcatttgtcattgccaa 195
Query: 289 caccatctcagccacgccgttcctgattctgatatgcttcttgtcgggaaccatatgcta 348
||||||||| | ||| |||||| | |||||||||||| |||| || || |||||||
Sbjct: 196 caccatctctgntctgccattcctggtcctgatatgcttcatgtcagggacagtatgcta 255
Query: 349 cttcatggtgcgcctccatcctggcttcgagcactacatcttcttcgtcttgaa-cctgt 407
||||||||||||||| ||||| || ||| |||||||||||||| |||||||| ||| |
Sbjct: 256 cttcatggtgcgccttcatcccggtttcacacactacatcttctttgtcttgaaccctct 315
Query: 408 acgccagcgttacggtggtcgagagcttgatgatggcgattgccagtgtcattccaaatt 467
||||||| || || ||||| ||||| ||||||||||| ||||| |||||||| || ||||
Sbjct: 316 acgccagtgtcaccgtggttgagagtttgatgatggccattgcaagtgtcatacccaatt 375
Query: 468 tcctcatgggtatcatcataggggccgggattcagggaatattcatgctggtctctggct 527
|||||||||| ||||||||||| || || |||||||||||||||||||| ||||| || |
Sbjct: 376 tcctcatgggcatcatcataggagctggaattcagggaatattcatgcttgtctccggat 435
Query: 528 acttcagacttccatacgacatcccgaagcccttttggagataccccatgcagtacatca 587
|||||||||||||||| |||||||||||| || |||||||||||||||||||||||||
Sbjct: 436 acttcagacttccatatgacatcccgaaggttttctggagataccccatgcagtacatca 495
Query: 588 gcttccactactgggcactgcagggccagtgccagaacgacatgaagggcctcgcggtcg 647
||||||| ||||||||||| |||||||| |||||||| |||||| | || ||| |||
Sbjct: 496 gcttccattactgggcactacagggccaatgccagaatgacatggacggtctcctattcg 555
Query: 648 acaaccaggacccggaccaacccaagatccccggggacttcatcctcaagtacatcttcc 707
||||||| |||||||||| || |||||||| ||||| |||||||| ||||||||||| |
Sbjct: 556 acaaccaatacccggaccagccgaagatccctggggagttcatcctgaagtacatctt-c 614
Query: 708 agatcaacgtggaccgttccaagtggatcgacctgtcggtcattttcagcatgat-cttc 766
||||||| ||| |||| || |||||||||||||||||||||||| | |||||||| ||||
Sbjct: 615 agatcaatgtgcaccggtcgaagtggatcgacctgtcggtcattntnagcatgatccttc 674
Query: 767 atctaccg 774
||||||||
Sbjct: 675 atctaccg 682
>gb|CN011458.1|CN011458 WHE3884_E06_I12ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3884_E06_I12,
mRNA sequence
Length = 736
Score = 555 bits (280), Expect = e-156
Identities = 517/593 (87%), Gaps = 3/593 (0%)
Strand = Plus / Plus
Query: 25 ttcatcaacatgtcgcgggactttgg-tactactggctnag-ctcntnatttacctcctc 82
||||||||||||||||| |||||||| ||||||||||| || ||| | || ||||||||
Sbjct: 142 ttcatcaacatgtcgcgcgactttgggtactactggctcaggctcttgatctacctcctt 201
Query: 83 gtcaccgtttgcatcggcacgatctacctggacgtcggcaccaaatacacatccatcctg 142
|| || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 202 gtgactgtatgcatcggcaccatctacctggatgtcggcaccaaatacacatccatcctg 261
Query: 143 gccagggctgcctgctccgcgttcgtctttgggttcgttacgttcatgtccattggagga 202
|||||||| || || | || ||||||||||| ||||| || ||||||||||||||||||
Sbjct: 262 gccagggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtccattggagga 321
Query: 203 ttcccttcgttcgttgaagaaatgaaggtcttccagcgggaacggctgaacgggcactac 262
|||||||| || || |||||||||||||| ||||||||||||||| |||| |||||||||
Sbjct: 322 ttcccttcatttgtggaagaaatgaaggttttccagcgggaacggttgaatgggcactac 381
Query: 263 ggtgtcgcggcgtttgtcatcagcaacaccatctcagccacgccgttcctgattctgata 322
||||| || || |||||||| |||||||||||| || ||| |||||| | ||||||
Sbjct: 382 ggtgttgcagcatttgtcattgccaacaccatctctgctctgccattcctggtcctgata 441
Query: 323 tgcttcttgtcgggaaccatatgctacttcatggtgcgcctccatcctggcttcgagcac 382
|||||| |||| || || |||||||||||||||||||||| |||||||| ||| |||
Sbjct: 442 tgcttcatgtcagggacagtatgctacttcatggtgcgccttcatcctggtttcacacac 501
Query: 383 tacatcttcttcgtcttgaacctgtacgccagcgttacggtggtcgagagcttgatgatg 442
||||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||
Sbjct: 502 tacatcttcttcgtcttgaacctctacgccagtgtcactgtggttgagagtttgatgatg 561
Query: 443 gcgattgccagtgtcattccaaatttcctcatgggtatcatcataggggccgggattcag 502
|| ||||| |||||||| || |||||||||||||| ||||||||||| || || ||||||
Sbjct: 562 gccattgcaagtgtcatacccaatttcctcatgggcatcatcataggagctggaattcag 621
Query: 503 ggaatattcatgctggtctctggctacttcagacttccatacgacatcccgaagcccttt 562
|||||||||||||| ||||| || |||||||||||||| || |||||||||||| |||
Sbjct: 622 ggaatattcatgcttgtctccggatacttcagacttccgtatgacatcccgaagatcttc 681
Query: 563 tggagataccccatgcagtacatcagcttccactactgggcactgcagggcca 615
|||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 682 tggagata-cccatgcagtacatcagcttccattactgggcactacagggcca 733
>gb|AJ614344.1|AJ614344 AJ614344 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 10080R, mRNA
sequence
Length = 602
Score = 527 bits (266), Expect = e-148
Identities = 486/557 (87%), Gaps = 2/557 (0%)
Strand = Plus / Plus
Query: 77 ctcctcgtcaccgtttgcatcggcacgatctacctggacgtcggcaccaaatacacatcc 136
|||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 38 ctcctcgtgaccgtctgcatcggcacaatctacctggatgtcggcaccaaatacacatcc 97
Query: 137 atcctggccagggctgcctgctccgcgttcgtctttgggttcgttacgttcatgtccatt 196
|||||||||||||| || || | || ||||||||||| ||||| || ||||||||||||
Sbjct: 98 atcctggccagggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtccatt 157
Query: 197 ggaggattcccttcgttcgttgaagaaatgaaggtcttccagcgggaacggctgaacggg 256
|||||||||||||| ||||| |||||||||||||| ||||||||||||||| |||| |||
Sbjct: 158 ggaggattcccttcattcgtggaagaaatgaaggttttccagcgggaacggttgaatggg 217
Query: 257 cac-tacggtgtcgcggcgtttgtcatcagcaacaccatctcagccacgccgttcctgat 315
||| |||||||| || || |||||||| |||||||||||| || ||| |||||| |
Sbjct: 218 cacctacggtgttgcagcatttgtcattgccaacaccatctctgctctgccattcctggt 277
Query: 316 tctgatatgcttcttgtcgggaaccatatgctacttcatggtgcgcctccatcctggctt 375
|||||||||||| |||| || || |||||||||||||||||||||| ||||| || ||
Sbjct: 278 cctgatatgcttcatgtcagggacagtatgctacttcatggtgcgccttcatcccggttt 337
Query: 376 cgagcactacatcttcttcgtcttgaacctgtacgccagcgttacggtggtcgagagctt 435
| |||||||||||||| ||||||||||| |||||||| || || ||||| ||||| ||
Sbjct: 338 cacacactacatcttctttgtcttgaacctctacgccagtgtcaccgtggttgagagttt 397
Query: 436 gatgatggcgattgccagtgtcattccaaatttcctcatgggtatcatcataggggccgg 495
||||||||| ||||| |||||||| || |||||||||||||| ||||||||||| || ||
Sbjct: 398 gatgatggccattgcaagtgtcatacccaatttcctcatgggcatcatcataggagctgg 457
Query: 496 gattcagggaatattcatgctggtctctggctacttcagacttccatacgacatcccgaa 555
|||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 458 aattcagggaatattcatgcttgtctccggatacttcagacttccatatgacatcccgaa 517
Query: 556 gcccttt-tggagataccccatgcagtacatcagcttccactactgggcactgcagggcc 614
| ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 518 ggtttttctggagataccccatgcagtacatcagcttccattactgggcactacagggcc 577
Query: 615 agtgccagaacgacatg 631
| || ||||| ||||||
Sbjct: 578 aatgncagaatgacatg 594
>gb|CD897506.1|CD897506 G174.106B19F010823 G174 Triticum aestivum cDNA clone G174106B19,
mRNA sequence
Length = 500
Score = 436 bits (220), Expect = e-120
Identities = 420/484 (86%), Gaps = 2/484 (0%)
Strand = Plus / Plus
Query: 74 tacctcctcgtcaccgtttgcatcggcacgatctacctggacgtcggcaccaaatacaca 133
|||||||| || || || ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 17 tacctccttgtgactgtatgcatcggcaccatctacctggatgtcggcaccaaatacaca 76
Query: 134 tccatcctggccaggg-ctgcctgctccgcgttcgtctttgggttcgttacgttcatgtc 192
|||||||||||||||| | || || | || ||||||||||| ||||| || ||||||||
Sbjct: 77 tccatcctggccaggggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtc 136
Query: 193 cattggaggattcccttcgttcgttgaagaaatgaaggtcttccagcgggaacggctgaa 252
|||||||||||||||||| || || |||||||||||||| ||||||||||||||| ||||
Sbjct: 137 cattggaggattcccttcatttgtggaagaaatgaaggttttccagcgggaacggttgaa 196
Query: 253 cgggcactacggtgtcgcggcgtttgtcatcagcaacaccatctcagccacgccgttcct 312
|||||||||||||| || || |||||||| |||||||||||| || ||| |||||
Sbjct: 197 tgggcactacggtgttgcagcatttgtcattgccaacaccatctctgctctgccattcct 256
Query: 313 gattctgatatgcttcttgtcgggaaccatatgctacttcatggtgcgcctccatcctgg 372
| | |||||||||||| |||| || || |||||||||||||||||||||| ||||||||
Sbjct: 257 ggtcctgatatgcttcatgtcagggacagtatgctacttcatggtgcgccttcatcctgg 316
Query: 373 cttcgagcactacatcttcttcgtcttgaacctgtacgccagcgttacggtggtcgagag 432
||| |||||||||||||||||||||||||| |||||||| || || ||||| |||||
Sbjct: 317 tttcacacactacatcttcttcgtcttgaacctctacgccagtgtcactgtggttgagag 376
Query: 433 cttgatgatggcgattgccagtgtcattccaaatttcctcatgggtatcatcataggggc 492
||||||||||| ||||| |||||||| || |||||||||||||| ||||||||||| ||
Sbjct: 377 -ttgatgatggccattgcaagtgtcatacccaatttcctcatgggcatcatcataggagc 435
Query: 493 cgggattcagggaatattcatgctggtctctggctacttcagacttccatacgacatccc 552
|| |||||||||||||||||||| ||||| || |||||||||||||| || ||||||||
Sbjct: 436 tggaattcagggaatattcatgcttgtctccggatacttcagacttccgtatgacatccc 495
Query: 553 gaag 556
||||
Sbjct: 496 gaag 499
>gb|AL821028.1|AL821028 AL821028 O:232 Triticum aestivum cDNA clone F08_O232_plate_7, mRNA
sequence
Length = 508
Score = 430 bits (217), Expect = e-119
Identities = 427/497 (85%)
Strand = Plus / Plus
Query: 254 gggcactacggtgtcgcggcgtttgtcatcagcaacaccatctcagccacgccgttcctg 313
|||||||||||||| || || |||||||| |||||||||||| || ||| ||||||
Sbjct: 9 gggcactacggtgttgcagcatttgtcattgccaacaccatctctgctctgccattcctg 68
Query: 314 attctgatatgcttcttgtcgggaaccatatgctacttcatggtgcgcctccatcctggc 373
| |||||||||||| |||| || || |||||||||||||||||||||| ||||| ||
Sbjct: 69 gtcctgatatgcttcatgtcagggacagtatgctacttcatggtgcgccttcatcccggt 128
Query: 374 ttcgagcactacatcttcttcgtcttgaacctgtacgccagcgttacggtggtcgagagc 433
||| |||||||||||||| ||||||||||| |||||||| || || ||||| |||||
Sbjct: 129 ttcacacactacatcttctttgtcttgaacctctacgccagtgtcaccgtggttgagagt 188
Query: 434 ttgatgatggcgattgccagtgtcattccaaatttcctcatgggtatcatcataggggcc 493
||||||||||| ||||| |||||||| || ||||||||||||| ||||||||||| ||
Sbjct: 189 ttgatgatggccattgcaagtgtcataccctatttcctcatgggcatcatcataggagct 248
Query: 494 gggattcagggaatattcatgctggtctctggctacttcagacttccatacgacatcccg 553
|| |||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 249 ggaattcagggaatattcatgcttgtctccggatacttcagacttccatatgacatcccg 308
Query: 554 aagcccttttggagataccccatgcagtacatcagcttccactactgggcactgcagggc 613
||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 309 aaggttttctggagataccccatgcagtacatcagcttccattactgggcactacagggc 368
Query: 614 cagtgccagaacgacatgaagggcctcgcggtcgacaaccaggacccggaccaacccaag 673
|| |||||||| |||||| | || ||| |||||||||| |||||||||| || |||
Sbjct: 369 caatgccagaatgacatggacggtctcctattcgacaaccaatacccggaccagccgaag 428
Query: 674 atccccggggacttcatcctcaagtacatcttccagatcaacgtggaccgttccaagtgg 733
||||| ||||| |||||||| |||||||||||||||||||| ||| |||| || ||||||
Sbjct: 429 atccctggggagttcatcctgaagtacatcttccagatcaatgtgcaccggtcgaagtgg 488
Query: 734 atcgacctgtcggtcat 750
|||||||||||||||||
Sbjct: 489 atcgacctgtcggtcat 505
>gb|BM137376.1|BM137376 WHE0463-0466_C01_C01ZS Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0463-0466_C01_C01, mRNA sequence
Length = 617
Score = 424 bits (214), Expect = e-117
Identities = 405/467 (86%), Gaps = 2/467 (0%)
Strand = Plus / Plus
Query: 25 ttcatcaacatgtcgcgggactttgg-tactactggctnag-ctcntnatttacctcctc 82
||||||||||||||||| |||||||| ||||||||||| || ||| | || ||||||||
Sbjct: 142 ttcatcaacatgtcgcgcgactttgggtactactggctcaggctcttgatctacctcctt 201
Query: 83 gtcaccgtttgcatcggcacgatctacctggacgtcggcaccaaatacacatccatcctg 142
|| || || ||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 202 gtgactgtatgcatcggcaccatctacctggatgtcggcaccaaatacacatccatcctg 261
Query: 143 gccagggctgcctgctccgcgttcgtctttgggttcgttacgttcatgtccattggagga 202
|||||||| || || | || ||||||||||| ||||| || ||||||||||||||||||
Sbjct: 262 gccagggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtccattggagga 321
Query: 203 ttcccttcgttcgttgaagaaatgaaggtcttccagcgggaacggctgaacgggcactac 262
|||||||| || || |||||||||||||| ||||||||||||||| |||| |||||||||
Sbjct: 322 ttcccttcatttgtggaagaaatgaaggttttccagcgggaacggttgaatgggcactac 381
Query: 263 ggtgtcgcggcgtttgtcatcagcaacaccatctcagccacgccgttcctgattctgata 322
||||| || || |||||||| |||||||||||| || ||| |||||| | ||||||
Sbjct: 382 ggtgttgcagcatttgtcattgccaacaccatctctgctctgccattcctggtcctgata 441
Query: 323 tgcttcttgtcgggaaccatatgctacttcatggtgcgcctccatcctggcttcgagcac 382
|||||| |||| || || |||||||||||||||||||||| |||||||| ||| |||
Sbjct: 442 tgcttcatgtcagggacagtatgctacttcatggtgcgccttcatcctggtttcacacac 501
Query: 383 tacatcttcttcgtcttgaacctgtacgccagcgttacggtggtcgagagcttgatgatg 442
||||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||
Sbjct: 502 tacatcttcttcgtcttgaacctctacgccagtgtcactgtggttgagagtttgatgatg 561
Query: 443 gcgattgccagtgtcattccaaatttcctcatgggtatcatcatagg 489
|| ||||| |||||||| || |||||||||||||| |||||||||||
Sbjct: 562 gccattgcaagtgtcatacccaatttcctcatgggcatcatcatagg 608
>gb|CD899788.1|CD899788 G174.113I23F010827 G174 Triticum aestivum cDNA clone G174113I23,
mRNA sequence
Length = 600
Score = 383 bits (193), Expect = e-104
Identities = 380/443 (85%), Gaps = 6/443 (1%)
Strand = Plus / Plus
Query: 502 gggaatattcatgctggtctctggctacttcagacttccatacgacatcccgaagccctt 561
||||||||||||||||||||| || ||||||||||||||||| |||||||||||| ||
Sbjct: 21 gggaatattcatgctggtctccggatacttcagacttccatatgacatcccgaaggtttt 80
Query: 562 ttggagataccccatgcagtacatcagcttccactactgggcactgcagggccagtgcca 621
||||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 81 ctggagataccccaggcagtacatcagcttccattactgggcactacagggccaatgcca 140
Query: 622 gaacgacatgaagggcctcgcggtcgacaaccaggacccggaccaacccaagatccccgg 681
||| |||||| | || ||| |||||||||| |||||||||| || |||||||| ||
Sbjct: 141 gaatgacatggacggtctcctattcgacaaccaatacccggaccagccgaagatccctgg 200
Query: 682 ggacttcatcctcaagtacatcttccagatcaacgtggaccgttccaagtggatcgacct 741
||| |||||||| |||||||||||||||||||| ||| |||| || ||||||||||||||
Sbjct: 201 ggagttcatcctgaagtacatcttccagatcaatgtgcaccggtcgaagtggatcgacct 260
Query: 742 gtcggtcattttcagcatgatcttcatctaccgcatcctcttcttcctcatgatcaagat 801
||||||||| |||||||||||||||||||||||| | || |||||| ||||||||||| |
Sbjct: 261 gtcggtcatcttcagcatgatcttcatctaccgcctgctgttcttcatcatgatcaaggt 320
Query: 802 caacgaggacgngctgccgtggatccgcggccacatcgcgaggaagaggatgcagaagaa 861
|||||||||| | |||| |||||||| ||| ||||||||||||| ||| | ||||||||
Sbjct: 321 gaacgaggacgtgatgccctggatccggggctacatcgcgaggaaaaggcttcagaagaa 380
Query: 862 gggccctacccccactatgggcaagacgccttcgctgagaggctacgtcgtcgatccgga 921
|| ||| || || |||||||||||||| ||||||||||| || || ||||||||
Sbjct: 381 ggtgcctgcc------atcggcaagacgccttccctgagaggctatgttgtggatccgga 434
Query: 922 gctcggttccaacgagggctaga 944
||| ||| | ||||| |||||||
Sbjct: 435 gcttggtcctaacgaaggctaga 457
>gb|BQ166063.1|BQ166063 WHE0807_E11_J21ZT Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0807_E11_J21, mRNA sequence
Length = 568
Score = 373 bits (188), Expect = e-101
Identities = 375/438 (85%), Gaps = 6/438 (1%)
Strand = Plus / Minus
Query: 507 tattcatgctggtctctggctacttcagacttccatacgacatcccgaagcccttttgga 566
|||||||||| ||||| || |||||||| ||||| || |||||||||||| || ||||
Sbjct: 568 tattcatgcttgtctccggatacttcaggcttccctatgacatcccgaaggttttctgga 509
Query: 567 gataccccatgcagtacatcagcttccactactgggcactgcagggccagtgccagaacg 626
|||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| |
Sbjct: 508 gataccccatgcagtacatcagcttccattactgggcactacagggccaatgccagaatg 449
Query: 627 acatgaagggcctcgcggtcgacaaccaggacccggaccaacccaagatccccggggact 686
||||| | || ||| |||||||||| |||||||||| || |||||||||||||| |
Sbjct: 448 acatggacggtctcctattcgacaaccaatacccggaccagccgaagatccccggggagt 389
Query: 687 tcatcctcaagtacatcttccagatcaacgtggaccgttccaagtggatcgacctgtcgg 746
||||||| |||||||||||||||||||||||| |||| || ||||||||||| |||||||
Sbjct: 388 tcatcctgaagtacatcttccagatcaacgtgcaccggtcgaagtggatcgatctgtcgg 329
Query: 747 tcattttcagcatgatcttcatctaccgcatcctcttcttcctcatgatcaagatcaacg 806
|||| |||||||||||||||||||||||| | || |||||| ||||||||||| | ||||
Sbjct: 328 tcatcttcagcatgatcttcatctaccgcctgctgttcttcatcatgatcaaggtgaacg 269
Query: 807 aggacgngctgccgtggatccgcggccacatcgcgaggaagaggatgcagaagaagggcc 866
|||||| | |||| |||||||| ||| ||||||||||||||||| | |||||||||| |
Sbjct: 268 aggacgtgatgccctggatccggggctacatcgcgaggaagaggcttcagaagaaggtgc 209
Query: 867 ctacccccactatgggcaagacgccttcgctgagaggctacgtcgtcgatccggagctcg 926
|| || || |||||||||||||| ||||||||||| || || ||||||||||| |
Sbjct: 208 ctgcc------atcggcaagacgccttccctgagaggctatgttgtggatccggagcttg 155
Query: 927 gttccaacgagggctaga 944
|| | ||||| |||||||
Sbjct: 154 gtcctaacgaaggctaga 137
>gb|CD928017.1|CD928017 GR45.103M13R010608 GR45 Triticum aestivum cDNA clone GR45103M13,
mRNA sequence
Length = 654
Score = 367 bits (185), Expect = 1e-099
Identities = 372/435 (85%), Gaps = 6/435 (1%)
Strand = Plus / Minus
Query: 510 tcatgctggtctctggctacttcagacttccatacgacatcccgaagcccttttggagat 569
||||||| ||||| || ||||||||||||||||| |||||||||||| || |||||||
Sbjct: 654 tcatgcttgtctccggatacttcagacttccatatgacatcccgaaggttttctggagat 595
Query: 570 accccatgcagtacatcagcttccactactgggcactgcagggccagtgccagaacgaca 629
||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||
Sbjct: 594 accccatgcagtacatcagcttccattactgggcactacagggccaatgccagaatgaca 535
Query: 630 tgaagggcctcgcggtcgacaaccaggacccggaccaacccaagatccccggggacttca 689
|| | || ||| |||||||||| |||||||||| || |||||||| ||||| ||||
Sbjct: 534 tggacggtctcctattcgacaaccaatacccggaccagccgaagatccctggggagttca 475
Query: 690 tcctcaagtacatcttccagatcaacgtggaccgttccaagtggatcgacctgtcggtca 749
|||| |||||||||||||||||||| ||| |||| || ||||||||||||||||||||||
Sbjct: 474 tcctgaagtacatcttccagatcaatgtgcaccggtcgaagtggatcgacctgtcggtca 415
Query: 750 ttttcagcatgatcttcatctaccgcatcctcttcttcctcatgatcaagatcaacgagg 809
| |||||||||||||||||||||||| | || |||||| ||||||||||| | |||||||
Sbjct: 414 tcttcagcatgatcttcatctaccgcctgctgttcttcatcatgatcaaggtgaacgagg 355
Query: 810 acgngctgccgtggatccgcggccacatcgcgaggaagaggatgcagaagaagggcccta 869
||| | |||| |||||||| ||| ||||||||||||| ||| | |||||||||| |||
Sbjct: 354 acgtgatgccctggatccggggctacatcgcgaggaaaaggcttcagaagaaggtgcctg 295
Query: 870 cccccactatgggcaagacgccttcgctgagaggctacgtcgtcgatccggagctcggtt 929
|| || |||||||||||||| ||||||||||| || || ||||||||||| |||
Sbjct: 294 cc------atcggcaagacgccttccctgagaggctatgttgtggatccggagcttggtc 241
Query: 930 ccaacgagggctaga 944
| ||||| |||||||
Sbjct: 240 ctaacgaaggctaga 226
>gb|CK208464.1|CK208464 FGAS020178 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1206
Score = 234 bits (118), Expect = 1e-059
Identities = 230/268 (85%), Gaps = 6/268 (2%)
Strand = Plus / Plus
Query: 657 acccggaccaacccaagatccccggggacttcatcctcaagtacatcttccagatcaacg 716
|||||||||| || |||||||| ||||| |||||||| |||||||||||||||||||| |
Sbjct: 23 acccggaccagccgaagatccctggggagttcatcctgaagtacatcttccagatcaatg 82
Query: 717 tggaccgttccaagtggatcgacctgtcggtcattttcagcatgatcttcatctaccgca 776
|| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 83 tgcaccggtcgaagtggatcgacctgtcggtcatcttcagcatgatcttcatctaccgcc 142
Query: 777 tcctcttcttcctcatgatcaagatcaacgaggacgngctgccgtggatccgcggccaca 836
| || |||||| ||||||||||| | |||||||||| | |||| |||||||| ||| |||
Sbjct: 143 tgctgttcttcatcatgatcaaggtgaacgaggacgtgatgccctggatccggggctaca 202
Query: 837 tcgcgaggaagaggatgcagaagaagggccctacccccactatgggcaagacgccttcgc 896
|||||||||| ||| | |||||||||| ||| || || |||||||||||||| |
Sbjct: 203 tcgcgaggaaaaggcttcagaagaaggtgcctgcc------atcggcaagacgccttccc 256
Query: 897 tgagaggctacgtcgtcgatccggagct 924
|||||||||| || || |||||||||||
Sbjct: 257 tgagaggctatgttgtggatccggagct 284
>gb|BQ161621.1|BQ161621 WHE0463-0466_C01_C01ZT Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0463-0466_C01_C01, mRNA sequence
Length = 433
Score = 228 bits (115), Expect = 6e-058
Identities = 227/265 (85%), Gaps = 6/265 (2%)
Strand = Plus / Minus
Query: 680 ggggacttcatcctcaagtacatcttccagatcaacgtggaccgttccaagtggatcgac 739
||||||||||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 433 ggggacttcatactgaagtacatcttccagatcaacgtgcaccggtcgaagtggatcgac 374
Query: 740 ctgtcggtcattttcagcatgatcttcatctaccgcatcctcttcttcctcatgatcaag 799
||||||||||| |||||||||||||||||||||||| | || |||||| |||||||||||
Sbjct: 373 ctgtcggtcatcttcagcatgatcttcatctaccgcctgctgttcttcatcatgatcaag 314
Query: 800 atcaacgaggacgngctgccgtggatccgcggccacatcgcgaggaagaggatgcagaag 859
| |||||||||| | |||| |||||||| ||| ||||||||||||||||| | ||||||
Sbjct: 313 gtgaacgaggacgtgatgccctggatccggggctacatcgcgaggaagaggcttcagaag 254
Query: 860 aagggccctacccccactatgggcaagacgccttcgctgagaggctacgtcgtcgatccg 919
|||| ||| || || |||||||||||||| ||||||||||| || || |||||
Sbjct: 253 aaggtgcctgcc------atcggcaagacgccttccctgagaggctatgttgtggatcca 200
Query: 920 gagctcggttccaacgagggctaga 944
||||| ||| | ||||| |||||||
Sbjct: 199 gagcttggtcctaacgaaggctaga 175
>gb|CK208772.1|CK208772 FGAS020491 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1103
Score = 228 bits (115), Expect = 6e-058
Identities = 231/269 (85%), Gaps = 7/269 (2%)
Strand = Plus / Plus
Query: 657 acccggaccaacccaagatccccggggacttc-atcctcaagtacatcttccagatcaac 715
|||||||||| || |||||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 30 acccggaccagccgaagatccccggggagttctatcctgaagtacatcttccagatcaat 89
Query: 716 gtggaccgttccaagtggatcgacctgtcggtcattttcagcatgatcttcatctaccgc 775
||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 90 gtgcaccggtcgaagtggatcgacctgtcggtcatcttcagcatgatcttcatctaccgc 149
Query: 776 atcctcttcttcctcatgatcaagatcaacgaggacgngctgccgtggatccgcggccac 835
| || |||||| ||||||||||| | |||||||||| | |||| |||||||| ||| ||
Sbjct: 150 ctgctgttcttcatcatgatcaaggtgaacgaggacgtgatgccctggatccggggctac 209
Query: 836 atcgcgaggaagaggatgcagaagaagggccctacccccactatgggcaagacgccttcg 895
||||||||||| ||| | |||||||||| ||| || || ||||||||||||||
Sbjct: 210 atcgcgaggaaaaggcttcagaagaaggtgcctgcc------atcggcaagacgccttcc 263
Query: 896 ctgagaggctacgtcgtcgatccggagct 924
||||||||||| || || |||||||||||
Sbjct: 264 ctgagaggctatgttgtggatccggagct 292
>gb|BE585824.1|BE585824 Est#2sp6_B09_b9_073 KSU wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
Est#2sp6_B09_b9_073, mRNA sequence
Length = 572
Score = 149 bits (75), Expect = 4e-034
Identities = 200/240 (83%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 25 ttcatcaacatgtcgcgggactttgg-tactactggctnag-ctcntnatttacctcctc 82
||||||||||||||||| |||||||| ||||||||||| || ||| | || ||||||||
Sbjct: 311 ttcatcaacatgtcgcgcgactttgggtactactggctcaggctcttgatctacctcctt 370
Query: 83 gtcaccgtttgcatcggcacgatctacctggacgtcggcaccaaatacacatccatcctg 142
|| || || ||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 371 gtgactgtatgcatcggcaccatctacctggatgtcggcaccaaatacacatgcatcctg 430
Query: 143 gccagggctgcctgctccgcgttcgtctttgggttcgttacgttcatgtccattggagga 202
|||||||| || || | | |||| |||||| ||| || ||||||| ||||| ||||
Sbjct: 431 gccagggcagcatgtgcaacattcgactttggattcaacaccttcatgtacattgaagga 490
Query: 203 ttcccttcgttcgttgaagaaatgaaggtcttccagcgggaacggctgaacgggcactac 262
|||||||| || | |||||||||||||| || || || ||||| |||| |||||||||
Sbjct: 491 ttcccttcatttgaggaagaaatgaaggttttacaacgataacggatgaatgggcactac 550
>gb|AJ603286.1|AJ603286 AJ603286 T06 Triticum aestivum cDNA clone F05_T06_plate_65, mRNA
sequence
Length = 382
Score = 133 bits (67), Expect = 3e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 697 gtacatcttccagatcaacgtggaccgttccaagtggatcgacctgtcggtcattttcag 756
|||||||||||||||||||||| |||| || ||||||||||||||||||||||| |||||
Sbjct: 284 gtacatcttccagatcaacgtgcaccggtcgaagtggatcgacctgtcggtcatcttcag 343
Query: 757 catgatcttcatctaccgcatcctcttcttcctcatgat 795
||||||||||||||||||| | || |||||| |||||||
Sbjct: 344 catgatcttcatctaccgcctgctgttcttcatcatgat 382
>gb|CD928016.1|CD928016 GR45.103M13F010315 GR45 Triticum aestivum cDNA clone GR45103M13,
mRNA sequence
Length = 706
Score = 129 bits (65), Expect = 4e-028
Identities = 113/126 (89%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 25 ttcatcaacatgtcgcgggactttgg-tactactggctnag-ctcntnatttacctcctc 82
||||||||||||||||| |||||||| ||||||||||| || ||| | || || ||||||
Sbjct: 581 ttcatcaacatgtcgcgcgactttgggtactactggctcaggctcttgatctatctcctc 640
Query: 83 gtcaccgtttgcatcggcacgatctacctgg-acgtcggcaccaaatacacatccatcct 141
|| ||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||||
Sbjct: 641 gtgaccgtctgcatcggcacaatctacctgggatgtcggcaccaaatacacatccatcct 700
Query: 142 ggccag 147
||||||
Sbjct: 701 ggccag 706
>gb|BE418655.1|BE418655 SCL072.H12R990528 ITEC SCL Wheat Leaf Library Triticum aestivum
cDNA clone SCL072.H12, mRNA sequence
Length = 899
Score = 117 bits (59), Expect = 2e-024
Identities = 200/243 (82%), Gaps = 6/243 (2%)
Strand = Plus / Plus
Query: 25 ttcatcaacatgtcgcgggactttggtactactggctna-gctcntnatttacctcctcg 83
||||||||||||||||| |||||||| |||||||| | |||| | || || || ||||
Sbjct: 520 ttcatcaacatgtcgcgcgactttgggtatactggctcaagctcttgatctatctnctcg 579
Query: 84 tcaccgtttgcatcggcacgatctacctggacgtcggcaccaaatacacatccatcctgg 143
| ||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 580 tgaccgtctgcatcggcacaatctacctggatgtcggcaccaaatacacatncattctgg 639
Query: 144 ccagggc-tgcctgctccgcgttcgtctttgggttcgttacgttcatgtccattggagga 202
||| ||| || || | | | ||||||||||| |||| || || |||| ||||||| ||
Sbjct: 640 ccaaggcaagcatg-tgcacattcgtctttggattcgncacctt-atgt-cattgganga 696
Query: 203 ttcccttcgttcgttgaagaaatgaaggtcttccagcgggaacggctg-aacgggcacta 261
||||||| |||| | | ||||||||| ||||||||||||||| || || ||||||||
Sbjct: 697 ttccctttattcgnggnaaaaatgaaggntttccagcgggaacggntgaaangggcacta 756
Query: 262 cgg 264
|||
Sbjct: 757 cgg 759
>gb|CD884896.1|CD884896 F1.118B23F010510 F1 Triticum aestivum cDNA clone F1118B23, mRNA
sequence
Length = 564
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 246 ggctgaacgggcactacggtgtc 268
|||||||||||||||||||||||
Sbjct: 215 ggctgaacgggcactacggtgtc 237
>gb|BG313979.1|BG313979 WHE2065_D11_H21ZS Wheat salt-stressed sheath cDNA library Triticum
aestivum cDNA clone WHE2065_D11_H21, mRNA sequence
Length = 592
Score = 44.1 bits (22), Expect = 0.019
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 5 gcaccctgaccaancgctccttcatcaacatgt 37
|||| |||||||| ||||||| |||||||||||
Sbjct: 241 gcacgctgaccaagcgctcctacatcaacatgt 273
>gb|CV762749.1|CV762749 FGAS057138 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 813
Score = 44.1 bits (22), Expect = 0.019
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 5 gcaccctgaccaancgctccttcatcaacatgt 37
|||| |||||||| ||||||| |||||||||||
Sbjct: 482 gcacgctgaccaagcgctcctacatcaacatgt 514
>gb|CA730460.1|CA730460 wip1c.pk004.p18 wip1c Triticum aestivum cDNA clone wip1c.pk004.p18
5' end, mRNA sequence
Length = 610
Score = 40.1 bits (20), Expect = 0.30
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 771 accgcatcctcttcttcctc 790
||||||||||||||||||||
Sbjct: 252 accgcatcctcttcttcctc 271
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 220,015
Number of Sequences: 636343
Number of extensions: 220015
Number of successful extensions: 59833
Number of sequences better than 0.5: 22
Number of HSP's better than 0.5 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 59773
Number of HSP's gapped (non-prelim): 36
length of query: 1030
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1010
effective length of database: 354,513,379
effective search space: 358058512790
effective search space used: 358058512790
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)