BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3866391.2.1
(613 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD924642.1|CD924642 G750.113N23F010706 G750 Triticum aes... 210 8e-053
gb|CD911499.1|CD911499 G550.111F03F010521 G550 Triticum aes... 202 2e-050
gb|CD454940.1|CD454940 WHE2013_C06_E11ZT CS wheat drought s... 153 2e-035
gb|BG606206.1|BG606206 WHE2961_H08_P15ZS Wheat dormant embr... 131 6e-029
gb|BE488569.1|BE488569 WHE1051_D01_G01ZS Wheat unstressed s... 121 6e-026
gb|CD911500.1|CD911500 G550.111F03R010831 G550 Triticum aes... 121 6e-026
gb|CD912735.1|CD912735 G550.115K04R010903 G550 Triticum aes... 121 6e-026
gb|CD915203.1|CD915203 G550.125G11F010713 G550 Triticum aes... 121 6e-026
gb|CD925469.1|CD925469 G750.117E21F010710 G750 Triticum aes... 113 1e-023
gb|BG606283.1|BG606283 WHE2959_A05_A09ZS Wheat dormant embr... 109 2e-022
gb|BI479006.1|BI479006 WHE2951_A10_A19ZS Wheat dormant embr... 109 2e-022
gb|AL820558.1|AL820558 AL820558 O:232 Triticum aestivum cDN... 96 3e-018
gb|AL820513.1|AL820513 AL820513 O:232 Triticum aestivum cDN... 86 3e-015
gb|CD862191.1|CD862191 AZO1.102L18R010504 AZO1 Triticum aes... 84 1e-014
gb|CD915204.1|CD915204 G550.125G11R010920 G550 Triticum aes... 84 1e-014
gb|BQ743494.1|BQ743494 WHE4104_F08_L16ZS Wheat salt-stresse... 62 5e-008
gb|CD924753.1|CD924753 G750.114G16F010706 G750 Triticum aes... 62 5e-008
gb|BQ579139.1|BQ579139 WHE2965_H10_P19ZS Wheat dormant embr... 58 7e-007
gb|BQ160944.1|BQ160944 WHE1051_D01_G01ZT Wheat unstressed s... 54 1e-005
gb|CD925774.1|CD925774 G750.118J23F010711 G750 Triticum aes... 54 1e-005
gb|BJ294119.1|BJ294119 BJ294119 Y. Ogihara unpublished cDNA... 50 2e-004
gb|BE592027.1|BE592027 WHE1651-1654_F21_F21ZS Wheat heat st... 46 0.003
gb|CA719780.1|CA719780 wkm2n.pk005.a13 wkm2n Triticum aesti... 44 0.011
gb|CD453636.1|CD453636 WHE0825-0828_J13_J13ZT CS wheat vern... 44 0.011
gb|CD877581.1|CD877581 AZO4.100K04F010925 AZO4 Triticum aes... 44 0.011
gb|CD877582.1|CD877582 AZO4.100K04R011122 AZO4 Triticum aes... 44 0.011
gb|CB307236.1|CB307236 HFIG221 Hessian fly infested cDNA li... 44 0.011
gb|CB307583.1|CB307583 HFIG568 Hessian fly infested cDNA li... 44 0.011
gb|AJ614168.1|AJ614168 AJ614168 Triticum turgidum subsp. du... 44 0.011
gb|DN829619.1|DN829619 KUCD01_10_B11_T3 WSWR cDNA library T... 44 0.011
gb|AF123603.1| Triticum aestivum clone CYP71C3-TA cytochrom... 44 0.011
dbj|AB124856.1| Triticum aestivum CYP71C8v1 mRNA for P450, ... 44 0.011
gb|BJ290995.1|BJ290995 BJ290995 Y. Ogihara unpublished cDNA... 42 0.044
gb|BJ297614.1|BJ297614 BJ297614 Y. Ogihara unpublished cDNA... 42 0.044
gb|CD923504.1|CD923504 G750.108M09F010531 G750 Triticum aes... 42 0.044
gb|CD923714.1|CD923714 G750.109N23F010530 G750 Triticum aes... 42 0.044
gb|AL818774.1|AL818774 AL818774 l:125 Triticum aestivum cDN... 40 0.17
gb|AJ613599.1|AJ613599 AJ613599 Triticum turgidum subsp. du... 40 0.17
gb|CV778035.1|CV778035 FGAS072443 Triticum aestivum FGAS: L... 40 0.17
dbj|AB042629.1| Triticum aestivum CYP71C8v2 mRNA for P450, ... 40 0.17
dbj|AB124857.1| Triticum aestivum CYP71C8v3 mRNA for P450, ... 40 0.17
>gb|CD924642.1|CD924642 G750.113N23F010706 G750 Triticum aestivum cDNA clone G750113N23,
mRNA sequence
Length = 661
Score = 210 bits (106), Expect = 8e-053
Identities = 339/416 (81%), Gaps = 3/416 (0%)
Strand = Plus / Plus
Query: 83 caagagtacaacctgacgagagatcagatcaaggcgcagctggtggtcatgttcgaagct 142
||||||||||| || |||||||| || || ||||| ||| | | | ||||||||||||||
Sbjct: 95 caagagtacaaactcacgagagaccatattaaggctcagttagagatcatgttcgaagct 154
Query: 143 ggcactgacacatccttcatagtgctggaatacgccatggttcagctgatgcgaaacccc 202
||||| || ||||| ||||||||| ||||||| || ||||| ||||| |||||||| |||
Sbjct: 155 ggcacagatacatcattcatagtgttggaatatgcgatggtccagctcatgcgaaaaccc 214
Query: 203 cacctgatgaccaagctacaagccgaggtgaggagcaccattattaataatggaacagag 262
||||| |||| |||||||||||| |||||||||||||| ||| | || || | |||
Sbjct: 215 cacctcatgaacaagctacaagctgaggtgaggagcac---tataaccaaggggaaagaa 271
Query: 263 atagtcaccgaggacgagctccacagcctatcctacctcaaggcagtcgtcaaagagacg 322
||||| ||||| ||||| ||| | || | ||||||| ||||||||| | ||||||||
Sbjct: 272 atagttaccgaagacgatctcgatagtttggcctacctaaaggcagtcattaaagagacc 331
Query: 323 ctgcggctccacatgccggctccactcctcgtgccccacctctccatggccgactgcacc 382
|| |||||||| ||||| | ||||||||| | ||||||||||||||||||||||||| |
Sbjct: 332 ctccggctccatatgcctgggccactcctcataccccacctctccatggccgactgcaac 391
Query: 383 atacaagggtacacgataccgtcgggaacacgaaccatcgtcaacagctgggctctcgcg 442
||| | || ||||||||||| || |||| ||| | |||| ||||||| |||||||| ||
Sbjct: 392 ataaagggctacacgataccatcaggaatacgtatcatcatcaacagttgggctcttgca 451
Query: 443 agggaccccagctgctgggagagagccgaggagttcatgcccgagcgcttcatgga 498
|||||||| || | |||||| || || ||||||||||| ||||| || |||||
Sbjct: 452 agggaccctagtagttgggagcatgcggatgagttcatgcctgagcggtttatgga 507
>gb|CD911499.1|CD911499 G550.111F03F010521 G550 Triticum aestivum cDNA clone G550111F03,
mRNA sequence
Length = 634
Score = 202 bits (102), Expect = 2e-050
Identities = 302/368 (82%), Gaps = 3/368 (0%)
Strand = Plus / Plus
Query: 83 caagagtacaacctgacgagagatcagatcaaggcgcagctggtggtcatgttcgaagct 142
||||||||||| || |||||||| || || ||||| ||| | | | ||||||||||||||
Sbjct: 218 caagagtacaaactcacgagagaccatattaaggctcagttagagatcatgttcgaagct 277
Query: 143 ggcactgacacatccttcatagtgctggaatacgccatggttcagctgatgcgaaacccc 202
||||| || ||||| ||||||||| ||||||| || ||||| ||||| |||||||| |||
Sbjct: 278 ggcacagatacatcattcatagtgttggaatatgcgatggtccagctcatgcgaaaaccc 337
Query: 203 cacctgatgaccaagctacaagccgaggtgaggagcaccattattaataatggaacagag 262
||||| |||| |||||||||||| |||||||||||||| ||| | || || | |||
Sbjct: 338 cacctcatgaacaagctacaagctgaggtgaggagcac---tataaccaaggggaaagaa 394
Query: 263 atagtcaccgaggacgagctccacagcctatcctacctcaaggcagtcgtcaaagagacg 322
||||| ||||| ||||| ||| | || | ||||||| ||||||||| | ||||||||
Sbjct: 395 atagttaccgaagacgatctcgatagtttggcctacctaaaggcagtcattaaagagacc 454
Query: 323 ctgcggctccacatgccggctccactcctcgtgccccacctctccatggccgactgcacc 382
|| |||||||| ||||| | ||||||||| | ||||| ||||||||||||||||||| |
Sbjct: 455 ctccggctccatatgcctgggccactcctcataccccaactctccatggccgactgcaac 514
Query: 383 atacaagggtacacgataccgtcgggaacacgaaccatcgtcaacagctgggctctcgcg 442
||| | || ||||||||||| || |||| ||| | |||| ||||||| |||||||| ||
Sbjct: 515 ataaagggctacacgataccatcaggaatacgtatcatcatcaacagttgggctcttgca 574
Query: 443 agggaccc 450
||||||||
Sbjct: 575 agggaccc 582
>gb|CD454940.1|CD454940 WHE2013_C06_E11ZT CS wheat drought stressed leaf cDNA library
Triticum aestivum cDNA clone WHE2013_C06_E11, mRNA
sequence
Length = 670
Score = 153 bits (77), Expect = 2e-035
Identities = 173/205 (84%)
Strand = Plus / Minus
Query: 294 cctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcg 353
||||||| ||||||||| |||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 508 cctacctaaaggcagtcatcaaagagacactccggctccatatgcccgcaccgctccttg 449
Query: 354 tgccccacctctccatggccgactgcaccatacaagggtacacgataccgtcgggaacac 413
|||| |||||||||||||||||||||| || | || ||||||||||| || || || |
Sbjct: 448 tgcctcacctctccatggccgactgcaaaattaatggctacacgataccatcagggacgc 389
Query: 414 gaaccatcgtcaacagctgggctctcgcgagggaccccagctgctgggagagagccgagg 473
| ||||||||||||| |||||||| || ||||| |||||| |||||||||| || || |
Sbjct: 388 gcgccatcgtcaacagttgggctcttgcaagggatcccagcagctgggagagcgcagaag 329
Query: 474 agttcatgcccgagcgcttcatgga 498
|||||||||| ||||| ||||||||
Sbjct: 328 agttcatgcctgagcggttcatgga 304
Score = 87.7 bits (44), Expect = 8e-016
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 129 tcatgttcgaagctggcactgacacatccttcatagtgctggaatacgccatggttcagc 188
||||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||| ||
Sbjct: 670 tcatgtttgaagctggcactgatacatcatttatagtgttggaatatgccatggttcggc 611
Query: 189 tgatgcgaaacccccacctgatgaccaagctacaagccgaggtgaggagcac 240
| |||| ||| |||||||| |||| |||||| || |||||| ||||||||
Sbjct: 610 tcatgcaaaaaccccacctcatgaataagctaaaaaacgaggtaaggagcac 559
>gb|BG606206.1|BG606206 WHE2961_H08_P15ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2961_H08_P15, mRNA sequence
Length = 629
Score = 131 bits (66), Expect = 6e-029
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 83 caagagtacaacctgacgagagatcagatcaaggcgcagctggtggtcatgttcgaagct 142
||||||||||| || |||||||| || || ||||| ||| | | | || |||||||||||
Sbjct: 329 caagagtacaaactcacgagagaccatattaaggctcagttagagatcctgttcgaagct 388
Query: 143 ggcactgacacatccttcatagtgctggaatacgccatggttcagctgatgcgaaacccc 202
||||| || ||||| ||||||||| ||||||| || ||||| ||||| |||||||| |||
Sbjct: 389 ggcacagatacatcattcatagtgttggaatatgcgatggtccagctcatgcgaaaaccc 448
Query: 203 cacctgatgaccaagctacaagccgaggtgaggagcac 240
||||| |||| |||||||||||| ||||||||||||||
Sbjct: 449 cacctcatgaacaagctacaagctgaggtgaggagcac 486
Score = 87.7 bits (44), Expect = 8e-016
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 294 cctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcg 353
||||||| ||||||||| | |||||||| || |||||||| ||||| | |||||||||
Sbjct: 537 cctacctaaaggcagtcattaaagagaccctccggctccatatgcctgggccactcctca 596
Query: 354 tgccccacctctccatggccgactgcaccata 385
| ||||||||||||||||||||||||| ||||
Sbjct: 597 taccccacctctccatggccgactgcaacata 628
>gb|BE488569.1|BE488569 WHE1051_D01_G01ZS Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1051_D01_G01,
mRNA sequence
Length = 685
Score = 121 bits (61), Expect = 6e-026
Identities = 154/185 (83%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtacaacctgacgagagatcagatcaag 115
|||||| |||| ||||| ||| |||| ||||||||||| || |||||||| || || |||
Sbjct: 45 ttcatcgatgtgttgctttccattcaacaagagtacaatcttacgagagaccatattaag 104
Query: 116 gcgcagctggtggtcatgttcgaagctggcactgacacatccttcatagtgctggaatac 175
|| ||| ||| | ||||||| ||||||||||| || ||||| ||||||||| |||||||
Sbjct: 105 gctcagttggagatcatgtttgaagctggcaccgatacatcgttcatagtgttggaatat 164
Query: 176 gccatggttcagctgatgcgaaacccccacctgatgaccaagctacaagccgaggtgagg 235
|||||||||| ||| |||| ||| |||||||| |||| ||||| || ||||||| |||
Sbjct: 165 gccatggttcggctcatgcaaaaaccccacctcatgaataagctgaaaaccgaggtcagg 224
Query: 236 agcac 240
|||||
Sbjct: 225 agcac 229
Score = 119 bits (60), Expect = 2e-025
Identities = 162/196 (82%)
Strand = Plus / Plus
Query: 294 cctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcg 353
||||||| ||||||||| |||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 280 cctacctaaaggcagtcatcaaagagacacttcggctccatatgcccgcaccgctccttg 339
Query: 354 tgccccacctctccatggccgactgcaccatacaagggtacacgataccgtcgggaacac 413
|||| |||||||||||||||||||||| || | || ||||| ||||| || || || |
Sbjct: 340 tgcctcacctctccatggccgactgcaaaatcaatggctacaccataccatcagggacgc 399
Query: 414 gaaccatcgtcaacagctgggctctcgcgagggaccccagctgctgggagagagccgagg 473
| ||||||| |||||||||||||| || ||||| ||||| | |||||||| || || |
Sbjct: 400 gcgccatcgtaaacagctgggctcttgcaagggatcccagtagttgggagagcgcagaag 459
Query: 474 agttcatgcccgagcg 489
|||||||||| |||||
Sbjct: 460 agttcatgcctgagcg 475
>gb|CD911500.1|CD911500 G550.111F03R010831 G550 Triticum aestivum cDNA clone G550111F03,
mRNA sequence
Length = 659
Score = 121 bits (61), Expect = 6e-026
Identities = 169/205 (82%)
Strand = Plus / Minus
Query: 294 cctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcg 353
||||||| ||||||||| | |||||||| || |||||||| ||||| | |||||||||
Sbjct: 586 cctacctaaaggcagtcattaaagagaccctccggctccatatgcctgggccactcctca 527
Query: 354 tgccccacctctccatggccgactgcaccatacaagggtacacgataccgtcgggaacac 413
| ||||||||||||||||||||||||| |||| | || ||||||||||| || |||| ||
Sbjct: 526 taccccacctctccatggccgactgcaacataaagggctacacgataccatcaggaatac 467
Query: 414 gaaccatcgtcaacagctgggctctcgcgagggaccccagctgctgggagagagccgagg 473
| | |||| ||||||| |||||||| || |||||||| || | |||||| || || |
Sbjct: 466 gtatcatcatcaacagttgggctcttgcaagggaccctagtagttgggagcatgcggatg 407
Query: 474 agttcatgcccgagcgcttcatgga 498
|||||||||| ||||| || |||||
Sbjct: 406 agttcatgcctgagcggtttatgga 382
>gb|CD912735.1|CD912735 G550.115K04R010903 G550 Triticum aestivum cDNA clone G550115K04,
mRNA sequence
Length = 611
Score = 121 bits (61), Expect = 6e-026
Identities = 169/205 (82%)
Strand = Plus / Minus
Query: 294 cctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcg 353
||||||| ||||||||| | |||||||| || |||||||| ||||| | |||||||||
Sbjct: 550 cctacctaaaggcagtcattaaagagaccctccggctccatatgcctgggccactcctca 491
Query: 354 tgccccacctctccatggccgactgcaccatacaagggtacacgataccgtcgggaacac 413
| ||||||||||||||||||||||||| |||| | || ||||||||||| || |||| ||
Sbjct: 490 taccccacctctccatggccgactgcaacataaagggctacacgataccatcaggaatac 431
Query: 414 gaaccatcgtcaacagctgggctctcgcgagggaccccagctgctgggagagagccgagg 473
| | |||| ||||||| |||||||| || |||||||| || | |||||| || || |
Sbjct: 430 gtatcatcatcaacagttgggctcttgcaagggaccctagtagttgggagcatgcggatg 371
Query: 474 agttcatgcccgagcgcttcatgga 498
|||||||||| ||||| || |||||
Sbjct: 370 agttcatgcctgagcggtttatgga 346
>gb|CD915203.1|CD915203 G550.125G11F010713 G550 Triticum aestivum cDNA clone G550125G11,
mRNA sequence
Length = 652
Score = 121 bits (61), Expect = 6e-026
Identities = 133/157 (84%)
Strand = Plus / Plus
Query: 84 aagagtacaacctgacgagagatcagatcaaggcgcagctggtggtcatgttcgaagctg 143
|||||||||| || |||||||| || || ||||| ||| | | | |||| ||||||||||
Sbjct: 163 aagagtacaaactcacgagagaccatattaaggctcagttagagatcatattcgaagctg 222
Query: 144 gcactgacacatccttcatagtgctggaatacgccatggttcagctgatgcgaaaccccc 203
|||| || ||||| ||||||||| ||||||| || ||||| ||||| |||||||| ||||
Sbjct: 223 gcacagatacatcattcatagtgttggaatatgcgatggtccagctcatgcgaaaacccc 282
Query: 204 acctgatgaccaagctacaagccgaggtgaggagcac 240
| || |||| |||||||||||| ||||||||||||||
Sbjct: 283 atctcatgaacaagctacaagctgaggtgaggagcac 319
Score = 113 bits (57), Expect = 1e-023
Identities = 168/205 (81%)
Strand = Plus / Plus
Query: 294 cctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcg 353
||||||| ||||||||| | |||||||| || |||||||| ||||| | |||||||||
Sbjct: 370 cctacctaaaggcagtcattaaagagacactccggctccatatgcctgggccactcctca 429
Query: 354 tgccccacctctccatggccgactgcaccatacaagggtacacgataccgtcgggaacac 413
| ||||||||||||||||||||||||| |||| | || ||||||||||| || |||| ||
Sbjct: 430 taccccacctctccatggccgactgcaacataaagggctacacgataccatcaggaatac 489
Query: 414 gaaccatcgtcaacagctgggctctcgcgagggaccccagctgctgggagagagccgagg 473
| |||| ||||||| |||||||| || |||||||| || | |||||| || || |
Sbjct: 490 gtgtcatcatcaacagttgggctcttgcaagggaccctagtagttgggagcatgcggatg 549
Query: 474 agttcatgcccgagcgcttcatgga 498
|||||||||| ||||| || |||||
Sbjct: 550 agttcatgcctgagcggtttatgga 574
>gb|CD925469.1|CD925469 G750.117E21F010710 G750 Triticum aestivum cDNA clone G750117E21,
mRNA sequence
Length = 541
Score = 113 bits (57), Expect = 1e-023
Identities = 168/205 (81%)
Strand = Plus / Plus
Query: 294 cctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcg 353
||||||| ||||||||| | |||||||| || |||||||| ||||| | |||||||||
Sbjct: 188 cctacctaaaggcagtcattaaagagacactccggctccatatgcctgggccactcctca 247
Query: 354 tgccccacctctccatggccgactgcaccatacaagggtacacgataccgtcgggaacac 413
| ||||||||||||||||||||||||| |||| | || ||||||||||| || |||| ||
Sbjct: 248 taccccacctctccatggccgactgcaacataaagggctacacgataccatcaggaatac 307
Query: 414 gaaccatcgtcaacagctgggctctcgcgagggaccccagctgctgggagagagccgagg 473
| |||| ||||||| |||||||| || |||||||| || | |||||| || || |
Sbjct: 308 gtgtcatcatcaacagttgggctcttgcaagggaccctagtagttgggagcatgcggatg 367
Query: 474 agttcatgcccgagcgcttcatgga 498
|||||||||| ||||| || |||||
Sbjct: 368 agttcatgcctgagcggtttatgga 392
Score = 111 bits (56), Expect = 6e-023
Identities = 98/112 (87%)
Strand = Plus / Plus
Query: 129 tcatgttcgaagctggcactgacacatccttcatagtgctggaatacgccatggttcagc 188
|||| |||||||||||||| || ||||| ||||||||| ||||||| || ||||| ||||
Sbjct: 26 tcatattcgaagctggcacagatacatcattcatagtgttggaatatgcgatggtccagc 85
Query: 189 tgatgcgaaacccccacctgatgaccaagctacaagccgaggtgaggagcac 240
| |||||||| ||||| || |||| |||||||||||| ||||||||||||||
Sbjct: 86 tcatgcgaaaaccccatctcatgaacaagctacaagctgaggtgaggagcac 137
>gb|BG606283.1|BG606283 WHE2959_A05_A09ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2959_A05_A09, mRNA sequence
Length = 463
Score = 109 bits (55), Expect = 2e-022
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 83 caagagtacaacctgacgagagatcagatcaaggcgcagctggtggtcatgttcgaagct 142
||||||||||| || |||||||| || || ||||| ||| | | | || |||||||||||
Sbjct: 319 caagagtacaaactcacgagagaccatattaaggctcagttagagatcctgttcgaagct 378
Query: 143 ggcactgacacatccttcatagtgctggaatacgccatggttcagctgatgcgaaacccc 202
||||| || ||||| ||||||||| ||||||| || ||||| ||||| |||||||| |||
Sbjct: 379 ggcacagatacatcattcatagtgttggaatatgcgatggtccagctcatgcgaaaaccc 438
Query: 203 cacctgatgaccaagctacaagc 225
||||| |||| ||||||||||||
Sbjct: 439 cacctcatgaacaagctacaagc 461
>gb|BI479006.1|BI479006 WHE2951_A10_A19ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2951_A10_A19, mRNA sequence
Length = 262
Score = 109 bits (55), Expect = 2e-022
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 83 caagagtacaacctgacgagagatcagatcaaggcgcagctggtggtcatgttcgaagct 142
||||||||||| || |||||||| || || ||||| ||| | | | || |||||||||||
Sbjct: 119 caagagtacaaactcacgagagaccatattaaggctcagttagagatcctgttcgaagct 178
Query: 143 ggcactgacacatccttcatagtgctggaatacgccatggttcagctgatgcgaaacccc 202
||||| || ||||| ||||||||| ||||||| || ||||| ||||| |||||||| |||
Sbjct: 179 ggcacagatacatcattcatagtgttggaatatgcgatggtccagctcatgcgaaaaccc 238
Query: 203 cacctgatgaccaagctacaagc 225
||||| |||| ||||||||||||
Sbjct: 239 cacctcatgaacaagctacaagc 261
>gb|AL820558.1|AL820558 AL820558 O:232 Triticum aestivum cDNA clone B03_O232_plate_14, mRNA
sequence
Length = 589
Score = 95.6 bits (48), Expect = 3e-018
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 295 ctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcgt 354
|||||| ||||||||| | |||||||| || |||||||| ||||| | ||||||||| |
Sbjct: 5 ctacctaaaggcagtcattaaagagacactccggctccatatgcctgggccactcctcat 64
Query: 355 gccccacctctccatggccgactgcaccatacaagggtacacgatacc 402
||||||||||||||||||||||||| |||| | || |||||||||||
Sbjct: 65 accccacctctccatggccgactgcaacataaagggctacacgatacc 112
>gb|AL820513.1|AL820513 AL820513 O:232 Triticum aestivum cDNA clone B03_O232_plate_13, mRNA
sequence
Length = 611
Score = 85.7 bits (43), Expect = 3e-015
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 344 ccactcctcgtgccccacctctccatggccgactgcaccatacaagggtacacgataccg 403
||||||||| | ||||||||||||||||||||||||| |||| | || |||||||||||
Sbjct: 39 ccactcctcataccccacctctccatggccgactgcaacatatagggctacacgatacca 98
Query: 404 tcgggaacacgaaccatcgtcaacagctgggctctcgcgagggaccc 450
|| |||| ||| |||| ||||||| |||||||| || ||||||||
Sbjct: 99 tcaggaatacgtgtcatcatcaacagttgggctcttgcaagggaccc 145
>gb|CD862191.1|CD862191 AZO1.102L18R010504 AZO1 Triticum aestivum cDNA clone AZO1102L18,
mRNA sequence
Length = 666
Score = 83.8 bits (42), Expect = 1e-014
Identities = 164/205 (80%)
Strand = Plus / Minus
Query: 294 cctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctcg 353
||||||| ||||| ||| |||||||||| || |||||||| ||||| | || ||||||
Sbjct: 612 cctacctaaaggcggtcatcaaagagacactccggctccatatgcctggnccgctcctca 553
Query: 354 tgccccacctctccatggccgactgcaccatacaagggtacacgataccgtcgggaacac 413
| ||||||||||||||||| ||||||| |||| | || |||| ||||| || |||| ||
Sbjct: 552 taccccacctctccatggctgactgcaacataaagggctacatcataccatcaggaatac 493
Query: 414 gaaccatcgtcaacagctgggctctcgcgagggaccccagctgctgggagagagccgagg 473
| ||| |||||||| ||||| || || |||||||| ||| | |||||| || || |
Sbjct: 492 gtgtcattgtcaacagttgggcacttgcaagggaccctagccgttgggagcacgcagatg 433
Query: 474 agttcatgcccgagcgcttcatgga 498
|||||||||| ||||| || |||||
Sbjct: 432 agttcatgcctgagcgatttatgga 408
>gb|CD915204.1|CD915204 G550.125G11R010920 G550 Triticum aestivum cDNA clone G550125G11,
mRNA sequence
Length = 598
Score = 83.8 bits (42), Expect = 1e-014
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 345 cactcctcgtgccccacctctccatggccgactgcaccatacaagggtacacgataccgt 404
|||||||| | ||||||||||||||||||||||||| |||| | || ||||||||||| |
Sbjct: 598 cactcctcataccccacctctccatggccgactgcaacataaagggctacacgataccat 539
Query: 405 cgggaacacgaaccatcgtcaacagctgggctctcgcgagggaccc 450
| |||| ||| |||| ||||||| |||||||| || ||||||||
Sbjct: 538 caggaatacgtgtcatcatcaacagttgggctcttgcaagggaccc 493
>gb|BQ743494.1|BQ743494 WHE4104_F08_L16ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4104_F08_L16, mRNA sequence
Length = 747
Score = 61.9 bits (31), Expect = 5e-008
Identities = 148/187 (79%)
Strand = Plus / Plus
Query: 53 gatttcatccatgtcttgctctcccttcagcaagagtacaacctgacgagagatcagatc 112
||||||||| |||| ||||| ||| |||| |||||||||||||| |||||||| | ||
Sbjct: 423 gatttcatcgatgtgttgctatccattcaacaagagtacaacctcacgagagaaaacgtc 482
Query: 113 aaggcgcagctggtggtcatgttcgaagctggcactgacacatccttcatagtgctggaa 172
||||| | |||||| ||||||| || ||| || |||||||| ||||||||| ||||
Sbjct: 483 aaggccgtgttggtggacatgttcataggtgggacggacacatcattcatagtgttggat 542
Query: 173 tacgccatggttcagctgatgcgaaacccccacctgatgaccaagctacaagccgaggtg 232
| || |||| | |||| || | ||| || | ||||||||||||| || || ||||||
Sbjct: 543 tgtgcaatggctgagctaatccaaaatccagaggtgatgaccaagctccaggctgaggtg 602
Query: 233 aggagca 239
|||||||
Sbjct: 603 aggagca 609
>gb|CD924753.1|CD924753 G750.114G16F010706 G750 Triticum aestivum cDNA clone G750114G16,
mRNA sequence
Length = 646
Score = 61.9 bits (31), Expect = 5e-008
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 293 tcctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctc 352
|||||||||||||| || || || |||||||| ||||||||| ||||| || ||||||
Sbjct: 297 tcctacctcaaggctgtggtgaaggagacgctccggctccacccaccggcgccgctcctc 356
Query: 353 gtgccccacctctccatggccga 375
| || |||||||||||||||||
Sbjct: 357 ctcccacacctctccatggccga 379
>gb|BQ579139.1|BQ579139 WHE2965_H10_P19ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2965_H10_P19, mRNA sequence
Length = 542
Score = 58.0 bits (29), Expect = 7e-007
Identities = 107/133 (80%)
Strand = Plus / Minus
Query: 366 ccatggccgactgcaccatacaagggtacacgataccgtcgggaacacgaaccatcgtca 425
||||||||||||||| |||| | || ||||||||||| || |||| ||| |||| |||
Sbjct: 542 ccatggccgactgcaacataaagggctacacgataccatcaggaatacgtgtcatcatca 483
Query: 426 acagctgggctctcgcgagggaccccagctgctgggagagagccgaggagttcatgcccg 485
|||| |||||||| || |||||||| || | |||||| || || ||||||||||| |
Sbjct: 482 acagttgggctcttgcaagggaccctagtagttgggagcatgcggatgagttcatgcctg 423
Query: 486 agcgcttcatgga 498
|||| || |||||
Sbjct: 422 agcggtttatgga 410
>gb|BQ160944.1|BQ160944 WHE1051_D01_G01ZT Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1051_D01_G01,
mRNA sequence
Length = 595
Score = 54.0 bits (27), Expect = 1e-005
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 417 ccatcgtcaacagctgggctctcgcgaggga-ccccagctgctgggagagagccgaggag 475
||||||| |||||||||||||| || ||||| |||||| | |||||||| || || |||
Sbjct: 582 ccatcgtaaacagctgggctcttgcaagggatccccagtagttgggagagcgcagaagag 523
Query: 476 ttcatgcccgagcgcttcatgga 498
|||||||| ||||| || |||||
Sbjct: 522 ttcatgcctgagcggtttatgga 500
>gb|CD925774.1|CD925774 G750.118J23F010711 G750 Triticum aestivum cDNA clone G750118J23,
mRNA sequence
Length = 664
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 293 tcctacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctc 352
|||||||||||||| || || || |||||||| ||||||||| ||||| || ||||||
Sbjct: 364 tcctacctcaaggctgtggtgaaggagacgctccggctccacccaccggcgccgctcctc 423
Query: 353 gtgccccacctctccatggccga 375
| || ||||||||||||||||
Sbjct: 424 ctcccaaacctctccatggccga 446
>gb|BJ294119.1|BJ294119 BJ294119 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl11a19 3', mRNA sequence
Length = 503
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 539 gacttccagtacataccgttcggcgcagggagaaggatgtg 579
|||||| ||||||||||||| || || ||||||||||||||
Sbjct: 277 gacttcgagtacataccgtttggggcggggagaaggatgtg 237
>gb|BE592027.1|BE592027 WHE1651-1654_F21_F21ZS Wheat heat stressed flag leaf cDNA library
Triticum aestivum cDNA clone WHE1651-1654_F21_F21, mRNA
sequence
Length = 469
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 540 acttccagtacataccgttcggcgcagggagaaggatgtgccc 582
||||| |||||||||||||||| ||||| || || ||||||||
Sbjct: 158 acttcgagtacataccgttcggggcaggcaggagaatgtgccc 200
>gb|CA719780.1|CA719780 wkm2n.pk005.a13 wkm2n Triticum aestivum cDNA clone wkm2n.pk005.a13
5' end, mRNA sequence
Length = 446
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 458 tgggagagagccgaggagttcatgcccgag 487
||||||||| | ||||||||||||||||||
Sbjct: 138 tgggagagaccggaggagttcatgcccgag 167
>gb|CD453636.1|CD453636 WHE0825-0828_J13_J13ZT CS wheat vernalized crown cDNA library
Triticum aestivum cDNA clone WHE0825-0828_J13_J13, mRNA
sequence
Length = 565
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 458 tgggagagagccgaggagttcatgcccgag 487
||||||||| | ||||||||||||||||||
Sbjct: 551 tgggagagaccggaggagttcatgcccgag 522
>gb|CD877581.1|CD877581 AZO4.100K04F010925 AZO4 Triticum aestivum cDNA clone AZO4100K04,
mRNA sequence
Length = 746
Score = 44.1 bits (22), Expect = 0.011
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 539 gacttccagtacataccgttcggcgcagggagaaggatgtgccccg 584
|||||| ||||||| ||||||||||| ||| | ||||||||||||
Sbjct: 556 gacttcgagtacatcccgttcggcgccgggcggcggatgtgccccg 601
>gb|CD877582.1|CD877582 AZO4.100K04R011122 AZO4 Triticum aestivum cDNA clone AZO4100K04,
mRNA sequence
Length = 728
Score = 44.1 bits (22), Expect = 0.011
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 539 gacttccagtacataccgttcggcgcagggagaaggatgtgccccg 584
|||||| ||||||| ||||||||||| ||| | ||||||||||||
Sbjct: 619 gacttcgagtacatcccgttcggcgccgggcggcggatgtgccccg 574
>gb|CB307236.1|CB307236 HFIG221 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 639
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 458 tgggagagagccgaggagttcatgcccgag 487
||||||||| | ||||||||||||||||||
Sbjct: 289 tgggagagaccggaggagttcatgcccgag 318
>gb|CB307583.1|CB307583 HFIG568 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 729
Score = 44.1 bits (22), Expect = 0.011
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 529 caaggggaacgacttccagtacataccgttcggcgcagggagaaggatgtgccc 582
||||||||| || ||||||| | | |||||||| ||||| |||||||||||||
Sbjct: 553 caaggggaatgatttccagttcttgccgttcggggcaggacgaaggatgtgccc 606
Score = 42.1 bits (21), Expect = 0.044
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 205 cctgatgaccaagctacaagccgaggtgaggag 237
|||||||| |||||||||| ||||||||||||
Sbjct: 235 cctgatgaggaagctacaagacgaggtgaggag 267
>gb|AJ614168.1|AJ614168 AJ614168 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09839R, mRNA
sequence
Length = 749
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 458 tgggagagagccgaggagttcatgcccgag 487
||||||||| | ||||||||||||||||||
Sbjct: 490 tgggagagaccggaggagttcatgcccgag 519
Score = 40.1 bits (20), Expect = 0.17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtac 91
||||||||||| || ||||| || ||||||||||||
Sbjct: 82 ttcatccatgttttcctctctctacagcaagagtac 117
>gb|DN829619.1|DN829619 KUCD01_10_B11_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 967
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 458 tgggagagagccgaggagttcatgcccgag 487
||||||||| | ||||||||||||||||||
Sbjct: 657 tgggagagaccggaggagttcatgcccgag 686
Score = 40.1 bits (20), Expect = 0.17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtac 91
||||||||||| || ||||| || ||||||||||||
Sbjct: 249 ttcatccatgttttcctctctctacagcaagagtac 284
>gb|AF123603.1| Triticum aestivum clone CYP71C3-TA cytochrome P450 mRNA, complete cds
Length = 1953
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 458 tgggagagagccgaggagttcatgcccgag 487
||||||||| | ||||||||||||||||||
Sbjct: 1337 tgggagagaccggaggagttcatgcccgag 1366
Score = 40.1 bits (20), Expect = 0.17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtac 91
||||||||||| || ||||| || ||||||||||||
Sbjct: 929 ttcatccatgttttcctctctctacagcaagagtac 964
>dbj|AB124856.1| Triticum aestivum CYP71C8v1 mRNA for P450, complete cds
Length = 1880
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 458 tgggagagagccgaggagttcatgcccgag 487
||||||||| | ||||||||||||||||||
Sbjct: 1324 tgggagagaccggaggagttcatgcccgag 1353
Score = 40.1 bits (20), Expect = 0.17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtac 91
||||||||||| || ||||| || ||||||||||||
Sbjct: 916 ttcatccatgttttcctctctctacagcaagagtac 951
>gb|BJ290995.1|BJ290995 BJ290995 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl21c10 5', mRNA sequence
Length = 545
Score = 42.1 bits (21), Expect = 0.044
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 552 taccgttcggcgcagggagaaggatgtgccccg 584
||||||||||||||||||| ||| ||||||||
Sbjct: 258 taccgttcggcgcagggaggagggggtgccccg 290
>gb|BJ297614.1|BJ297614 BJ297614 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl21c10 3', mRNA sequence
Length = 518
Score = 42.1 bits (21), Expect = 0.044
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 552 taccgttcggcgcagggagaaggatgtgccccg 584
||||||||||||||||||| ||| ||||||||
Sbjct: 251 taccgttcggcgcagggaggagggggtgccccg 219
>gb|CD923504.1|CD923504 G750.108M09F010531 G750 Triticum aestivum cDNA clone G750108M09,
mRNA sequence
Length = 501
Score = 42.1 bits (21), Expect = 0.044
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 296 tacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctc 352
||||||||||| ||||| || |||||||| ||||| ||| |||||| || ||||||
Sbjct: 114 tacctcaaggccgtcgtgaaggagacgctccggctacacccgccggcgccgctcctc 170
>gb|CD923714.1|CD923714 G750.109N23F010530 G750 Triticum aestivum cDNA clone G750109N23,
mRNA sequence
Length = 508
Score = 42.1 bits (21), Expect = 0.044
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 296 tacctcaaggcagtcgtcaaagagacgctgcggctccacatgccggctccactcctc 352
||||||||||| ||||| || |||||||| ||||| ||| |||||| || ||||||
Sbjct: 228 tacctcaaggccgtcgtgaaggagacgctccggctacacccgccggcgccgctcctc 284
>gb|AL818774.1|AL818774 AL818774 l:125 Triticum aestivum cDNA clone G04_l125_plate_6, mRNA
sequence
Length = 312
Score = 40.1 bits (20), Expect = 0.17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtac 91
||||||||||| || ||||| || ||||||||||||
Sbjct: 267 ttcatccatgttttcctctctctacagcaagagtac 302
>gb|AJ613599.1|AJ613599 AJ613599 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 08969R, mRNA
sequence
Length = 750
Score = 40.1 bits (20), Expect = 0.17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtac 91
||||||||||| || ||||| || ||||||||||||
Sbjct: 416 ttcatccatgttttcctctctctacagcaagagtac 451
>gb|CV778035.1|CV778035 FGAS072443 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 825
Score = 40.1 bits (20), Expect = 0.17
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 529 caaggggaacgacttccagtacataccgttcggcgcagggagaaggatgtgccccg 584
||||||||| || ||||||| | | || ||||| ||||| |||||||||||||||
Sbjct: 205 caaggggaatgatttccagttcttgccattcggggcaggacgaaggatgtgccccg 260
>dbj|AB042629.1| Triticum aestivum CYP71C8v2 mRNA for P450, complete cds
Length = 2113
Score = 40.1 bits (20), Expect = 0.17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtac 91
||||||||||| || ||||| || ||||||||||||
Sbjct: 1144 ttcatccatgttttcctctctctacagcaagagtac 1179
>dbj|AB124857.1| Triticum aestivum CYP71C8v3 mRNA for P450, complete cds
Length = 1823
Score = 40.1 bits (20), Expect = 0.17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 ttcatccatgtcttgctctcccttcagcaagagtac 91
||||||||||| || ||||| || ||||||||||||
Sbjct: 901 ttcatccatgttttcctctctctacagcaagagtac 936
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 154,973
Number of Sequences: 636343
Number of extensions: 154973
Number of successful extensions: 44257
Number of sequences better than 0.5: 41
Number of HSP's better than 0.5 without gapping: 40
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 44174
Number of HSP's gapped (non-prelim): 81
length of query: 613
length of database: 367,240,239
effective HSP length: 19
effective length of query: 594
effective length of database: 355,149,722
effective search space: 210958934868
effective search space used: 210958934868
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)