BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829259.2.1
(1019 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK204227.1|CK204227 FGAS012763 Triticum aestivum FGAS: L... 367 1e-099
gb|CK203901.1|CK203901 FGAS012436 Triticum aestivum FGAS: L... 359 2e-097
gb|CK194020.1|CK194020 FGAS002439 Triticum aestivum FGAS: L... 337 9e-091
gb|BQ237865.1|BQ237865 TaE05011C08F TaE05 Triticum aestivum... 315 3e-084
gb|CV768252.1|CV768252 FGAS062643 Triticum aestivum FGAS: L... 262 4e-068
gb|CD928477.1|CD928477 GR45.104P06F010319 GR45 Triticum aes... 254 1e-065
gb|CA651482.1|CA651482 wre1n.pk177.e10 wre1n Triticum aesti... 214 9e-054
gb|CA647598.1|CA647598 wre1n.pk0112.c5 wre1n Triticum aesti... 151 1e-034
gb|CA647287.1|CA647287 wre1n.pk0116.h1 wre1n Triticum aesti... 147 2e-033
gb|CD491409.1|CD491409 WHE3087_A06_A11ZT CS wheat cold-stre... 107 2e-021
gb|CA661459.1|CA661459 wlmk1.pk0001.d7 wlmk1 Triticum aesti... 105 6e-021
gb|CK196210.1|CK196210 FGAS004659 Triticum aestivum FGAS: L... 98 1e-018
gb|CA484453.1|CA484453 WHE4306_G02_M04ZS Wheat meiotic anth... 68 1e-009
gb|BE429450.1|BE429450 TAS000.C07R990618 ITEC TAS Wheat cDN... 52 8e-005
gb|BE429853.1|BE429853 TAS004.E02R990616 ITEC TAS Wheat cDN... 52 8e-005
gb|BJ295816.1|BJ295816 BJ295816 Y. Ogihara unpublished cDNA... 52 8e-005
gb|BU099275.1|BU099275 WHE3305_F03_K05ZS Chinese Spring whe... 52 8e-005
gb|CA609684.1|CA609684 wr1.pk0111.b7 wr1 Triticum aestivum ... 52 8e-005
gb|CA620492.1|CA620492 wl1n.pk0057.d4 wl1n Triticum aestivu... 52 8e-005
gb|CA643335.1|CA643335 wre1n.pk0072.d5 wre1n Triticum aesti... 52 8e-005
gb|CD864167.1|CD864167 AZO1.109F13F000829 AZO1 Triticum aes... 52 8e-005
gb|CD882667.1|CD882667 F1.110K22R010628 F1 Triticum aestivu... 52 8e-005
gb|CD905845.1|CD905845 G468.103A18F010809 G468 Triticum aes... 52 8e-005
gb|CD938611.1|CD938611 OV.110H18R010406 OV Triticum aestivu... 52 8e-005
gb|AJ602763.1|AJ602763 AJ602763 T06 Triticum aestivum cDNA ... 52 8e-005
gb|CK162546.1|CK162546 FGAS015142 Triticum aestivum FGAS: L... 52 8e-005
gb|AL811339.1|AL811339 AL811339 d:37 Triticum aestivum cDNA... 52 8e-005
gb|CA632642.1|CA632642 wle1n.pk0060.a2 wle1n Triticum aesti... 50 3e-004
gb|BE429088.1|BE429088 MTD014.C05F990621 ITEC MTD Durum Whe... 46 0.005
gb|BJ218914.1|BJ218914 BJ218914 Y. Ogihara unpublished cDNA... 46 0.005
gb|BQ620368.1|BQ620368 TaLr1166H03R TaLr1 Triticum aestivum... 46 0.005
gb|CA498544.1|CA498544 WHE3244_G06_N12ZT Wheat meiotic anth... 46 0.005
gb|CA644986.1|CA644986 wre1n.pk0085.f8 wre1n Triticum aesti... 46 0.005
gb|CD938609.1|CD938609 OV.110H16R010406 OV Triticum aestivu... 46 0.005
gb|BE591927.1|BE591927 WHE1651-1654_I19_I19ZS Wheat heat st... 44 0.019
gb|BJ290807.1|BJ290807 BJ290807 Y. Ogihara unpublished cDNA... 44 0.019
gb|BU672156.1|BU672156 WHE3301_C05_E09ZS Chinese Spring whe... 44 0.019
gb|CA665709.1|CA665709 wlk1.pk0026.b8 wlk1 Triticum aestivu... 44 0.019
gb|CD880379.1|CD880379 F1.001I23F001129 F1 Triticum aestivu... 44 0.019
gb|CK193679.1|CK193679 FGAS002095 Triticum aestivum FGAS: L... 44 0.019
gb|AL823053.1|AL823053 AL823053 p:133 Triticum aestivum cDN... 42 0.074
>gb|CK204227.1|CK204227 FGAS012763 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 812
Score = 367 bits (185), Expect = 1e-099
Identities = 408/481 (84%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 511 gcacatttctgtgatgccatatttcgctttccagtggagctctctctctgcttttgccgg 570
|||||| || ||||||||||||| |||||||||| ||| ||||||||||||| | |
Sbjct: 779 gcacatctcagtgatgccatattgtgctttccagttgagttctctctctgcttagccagt 720
Query: 571 cgatgaaaagagaatctcagcatcaccaggacgccgttggcccatgaccaaagggatttt 630
||| ||||||||||| |||||||||||||| || || || ||||||| ||||||||
Sbjct: 719 tcatgcaaagagaatctgggcatcaccaggacggcgctgaccgatgaccagcgggatttt 660
Query: 631 ctttccagaagccttctcaaatgcattgactatctccaacactgatgttccttttccggt 690
|||| |||||||||||||| ||||||||||||||||||||||||| || || ||||| ||
Sbjct: 659 ctttgcagaagccttctcatatgcattgactatctccaacactgacgtcccctttccagt 600
Query: 691 tccaaggttgtatgcttcacatcctatgttagatgagctttcaaaaagcttccttaatgc 750
||||||||||||| |||||||||||||||||| || || ||||||||||||| | |||
Sbjct: 599 cccaaggttgtatggttcacatcctatgttagacgaactatcaaaaagcttccgcagtgc 540
Query: 751 gaaaagatgtccttcagcaaggtcaaccacatgagatataatcacgaacccctgtcccat 810
|| ||| || |||||||| |||| ||||||| || ||||| || ||||| |||||||
Sbjct: 539 agcaatatgcccctcagcaagatcaagcacatga-atgtaatctcgtaccccggtcccat 481
Query: 811 cctttgttgcgtagttatttccaaatattgttagcgatggcctcctgccaactgcaattt 870
| || ||||| |||||||||||||| ||||| | || |||||||| ||||| |||| ||
Sbjct: 480 ctttagttgcatagttatttccaaagattgtcactgacggcctcctcccaacagcaactt 421
Query: 871 gctgaacgaagggcataaggttgttaggagttccacatgggtcttcaccaaggtatccac 930
|||||||| |||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 420 gctgaacgtagggcataaggttgtttggaactccacgtgggtcttcaccaaggtatccac 361
Query: 931 tggggtgagccccaactggattaaagtacctaagcaaaatgatattccattcaggatctg 990
|||||||||||||||| || || ||||||||||| |||||||| |||| |||| |||||
Sbjct: 360 tggggtgagccccaaccgggttgaagtacctaagtaaaatgattctccactcagaatctg 301
Query: 991 a 991
|
Sbjct: 300 a 300
>gb|CK203901.1|CK203901 FGAS012436 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 858
Score = 359 bits (181), Expect = 2e-097
Identities = 407/481 (84%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 511 gcacatttctgtgatgccatatttcgctttccagtggagctctctctctgcttttgccgg 570
|||||| || |||||||||||||| ||||||||| ||| |||||||||||| | | |
Sbjct: 778 gcacatctcagtgatgccatattttgctttccagatgagttctctctctgctgtgccagt 719
Query: 571 cgatgaaaagagaatctcagcatcaccaggacgccgttggcccatgaccaaagggatttt 630
|| |||||||||||| |||||||||||||| || || || ||||||| ||||||||
Sbjct: 718 tcctgcaaagagaatctcggcatcaccaggacggcgctgaccgatgaccagcgggatttt 659
Query: 631 ctttccagaagccttctcaaatgcattgactatctccaacactgatgttccttttccggt 690
||||||||||||||||||| ||||||||||||||||| ||||||| || || ||||| ||
Sbjct: 658 ctttccagaagccttctcatatgcattgactatctcctacactgacgtcccctttccagt 599
Query: 691 tccaaggttgtatgcttcacatcctatgttagatgagctttcaaaaagcttccttaatgc 750
||||||||||||| |||||||||||||||||| || || |||| |||||||| | |||
Sbjct: 598 cccaaggttgtatggttcacatcctatgttagacgaactatcaacaagcttccgcagtgc 539
Query: 751 gaaaagatgtccttcagcaaggtcaaccacatgagatataatcacgaacccctgtcccat 810
|| ||| || |||||||| |||| ||||||| || ||||| || ||||| |||||||
Sbjct: 538 agcaatatgcccctcagcaagatcaagcacatga-atgtaatctcgtaccccggtcccat 480
Query: 811 cctttgttgcgtagttatttccaaatattgttagcgatggcctcctgccaactgcaattt 870
| || ||||| |||||||||||||| ||||| | || |||||||| ||||| |||| ||
Sbjct: 479 ctttagttgcatagttatttccaaagattgtcactgacggcctcctcccaacagcaactt 420
Query: 871 gctgaacgaagggcataaggttgttaggagttccacatgggtcttcaccaaggtatccac 930
|||||||| |||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 419 gctgaacgtagggcataaggttgtttggaactccacgtgggtcttcaccaaggtatccac 360
Query: 931 tggggtgagccccaactggattaaagtacctaagcaaaatgatattccattcaggatctg 990
|||||||||||||||| || || ||||||||||| |||||||| |||| |||| |||||
Sbjct: 359 tggggtgagccccaaccgggttgaagtacctaagtaaaatgattctccactcagaatctg 300
Query: 991 a 991
|
Sbjct: 299 a 299
>gb|CK194020.1|CK194020 FGAS002439 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 337 bits (170), Expect = 9e-091
Identities = 327/378 (86%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 614 atgaccaaagggattttctttccagaagccttctcaaatgcattgactatctccaacact 673
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 660 atgaccagcgggattttctttccagaagccttctcgaatgcattgactatctccaacact 601
Query: 674 gatgttccttttccggttccaaggttgtatgcttcacatcctatgttagatgagctttca 733
|| || || ||||| || ||||||||||||| |||||||||||||||||| || || |||
Sbjct: 600 gacgtcccctttccagtcccaaggttgtatggttcacatcctatgttagacgaactatca 541
Query: 734 aaaagcttccttaatgcgaaaagatgtccttcagcaaggtcaaccacatgagatataatc 793
|||||||||| || ||| || ||| || |||||||| |||| ||||||| ||||||||
Sbjct: 540 aaaagcttccgtagtgcagcaatatgcccctcagcaagatcaagcacatga-atataatc 482
Query: 794 acgaacccctgtcccatcctttgttgcgtagttatttccaaatattgttagcgatggcct 853
|| ||||| ||| |||| || ||||| |||||||||||||| ||||| | || |||||
Sbjct: 481 tcgtaccccggtcacatctttagttgcatagttatttccaaagattgtcactgacggcct 422
Query: 854 cctgccaactgcaatttgctgaacgaagggcataaggttgttaggagttccacatgggtc 913
||| ||||| |||| |||||||||| |||||||||||||||| ||| ||||| ||||||
Sbjct: 421 cctcccaacagcaacttgctgaacgtagggcataaggttgtttggaactccacgtgggtc 362
Query: 914 ttcaccaaggtatccactggggtgagccccaactggattaaagtacctaagcaaaatgat 973
||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||
Sbjct: 361 ttcaccaaggtatccactggggtgagccccaaccgggttgaagtacctaagtaaaatgat 302
Query: 974 attccattcaggatctga 991
|||| |||| ||||||
Sbjct: 301 tctccactcagaatctga 284
>gb|BQ237865.1|BQ237865 TaE05011C08F TaE05 Triticum aestivum cDNA clone TaE05011C08F, mRNA
sequence
Length = 613
Score = 315 bits (159), Expect = 3e-084
Identities = 349/411 (84%), Gaps = 1/411 (0%)
Strand = Plus / Plus
Query: 476 taagggctcttgctagcccagttccacaggtctccgcacatttctgtgatgccatatttc 535
|||||| |||||||||||||||||||| |||| | |||||| || ||||||||||||||
Sbjct: 204 taagggttcttgctagcccagttccactggtccctgcacatctccgtgatgccatatttt 263
Query: 536 gctttccagtggagctctctctctgcttttgccggcgatgaaaagagaatctcagcatca 595
|||||||||| ||| |||||||||||||| | | || |||||||||||| ||||||
Sbjct: 264 gctttccagttgagttctctctctgctttgccagttcctgcaaagagaatctcggcatca 323
Query: 596 ccaggacgccgttggcccatgaccaaagggattttctttccagaagccttctcaaatgca 655
||||| || || || || ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 324 ccagggcggcgctgaccgatgaccagcgggattttctttccagaagccttctcaaatgca 383
Query: 656 ttgactatctccaacactgatgttccttttccggttccaaggttgtatgcttcacatcct 715
|||||||||||||||||||| || || ||||| || ||||||||||||| ||||||||||
Sbjct: 384 ttgactatctccaacactgacgtcccctttccagtcccaaggttgtatggttcacatcct 443
Query: 716 atgttagatgagctttcaaaaagcttccttaatgcgaaaagatgtccttcagcaaggtca 775
|||||||| || || ||||||||||||| | ||| || ||| || |||||||| |||
Sbjct: 444 atgttagacgaactatcaaaaagcttccgcagtgcagcaatatgcccctcagcaagatca 503
Query: 776 accacatgagatataatcacgaacccctgtcccatcctttgttgcgtagttatttccaaa 835
| ||||||| || ||||| || ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 504 agcacatga-atgtaatctcgtaccccggtcccatctttagttgcatagttatttccaaa 562
Query: 836 tattgttagcgatggcctcctgccaactgcaatttgctgaacgaagggcat 886
||||| | || |||||||| ||||| |||| |||||||||| |||||||
Sbjct: 563 gattgtcactgacggcctcctcccaacagcaacttgctgaacgtagggcat 613
>gb|CV768252.1|CV768252 FGAS062643 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 262 bits (132), Expect = 4e-068
Identities = 234/268 (87%)
Strand = Plus / Minus
Query: 476 taagggctcttgctagcccagttccacaggtctccgcacatttctgtgatgccatatttc 535
|||||| |||||||||||||||||||| |||| | |||||| || ||||||||||||||
Sbjct: 406 taagggttcttgctagcccagttccactggtccctgcacatctccgtgatgccatatttt 347
Query: 536 gctttccagtggagctctctctctgcttttgccggcgatgaaaagagaatctcagcatca 595
|||||||||| ||| |||||||||||||| | | || |||||||||||| ||||||
Sbjct: 346 gctttccagttgagttctctctctgctttgccagttcctgcaaagagaatctcggcatca 287
Query: 596 ccaggacgccgttggcccatgaccaaagggattttctttccagaagccttctcaaatgca 655
||||| || || || || ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 286 ccagggcggcgctgaccgatgaccagcgggattttctttccagaagccttctcaaatgca 227
Query: 656 ttgactatctccaacactgatgttccttttccggttccaaggttgtatgcttcacatcct 715
|||||||||||||||||||| || || ||||| || ||||||||||||| ||||||||||
Sbjct: 226 ttgactatctccaacactgacgtcccctttccagtcccaaggttgtatggttcacatcct 167
Query: 716 atgttagatgagctttcaaaaagcttcc 743
|||||||| || || |||||||||||||
Sbjct: 166 atgttagacgaactatcaaaaagcttcc 139
Score = 52.0 bits (26), Expect = 8e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 195 agaattgaattagctggttgactatagcaa 224
|||||||||||||||||| |||||||||||
Sbjct: 701 agaattgaattagctggtcgactatagcaa 672
>gb|CD928477.1|CD928477 GR45.104P06F010319 GR45 Triticum aestivum cDNA clone GR45104P06,
mRNA sequence
Length = 465
Score = 254 bits (128), Expect = 1e-065
Identities = 233/268 (86%)
Strand = Plus / Minus
Query: 476 taagggctcttgctagcccagttccacaggtctccgcacatttctgtgatgccatatttc 535
|||||| |||||||||||||||||||| |||| | |||||| || ||||||||||| |||
Sbjct: 269 taagggttcttgctagcccagttccactggtccctgcacatctccgtgatgccatacttc 210
Query: 536 gctttccagtggagctctctctctgcttttgccggcgatgaaaagagaatctcagcatca 595
|||||||||| ||| |||||||||||||| | | || |||||||||||| ||||||
Sbjct: 209 gctttccagttgagttctctctctgctttaccagttcctgcaaagagaatctcggcatca 150
Query: 596 ccaggacgccgttggcccatgaccaaagggattttctttccagaagccttctcaaatgca 655
||||| || || || || ||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 149 ccagggcggcgctgaccgatgaccagcgggattttctttccagaagccttctcgaatgca 90
Query: 656 ttgactatctccaacactgatgttccttttccggttccaaggttgtatgcttcacatcct 715
|||||||||||||||||||| || || ||||| || ||||||||||||| ||||||||||
Sbjct: 89 ttgactatctccaacactgacgtcccctttccagtcccaaggttgtatggttcacatcct 30
Query: 716 atgttagatgagctttcaaaaagcttcc 743
|||||||| || || |||||||||||||
Sbjct: 29 atgttagacgaactatcaaaaagcttcc 2
>gb|CA651482.1|CA651482 wre1n.pk177.e10 wre1n Triticum aestivum cDNA clone wre1n.pk177.e10
5' end, mRNA sequence
Length = 346
Score = 214 bits (108), Expect = 9e-054
Identities = 270/322 (83%), Gaps = 4/322 (1%)
Strand = Plus / Minus
Query: 577 aaagagaatctcagcatcaccaggacgccgttggccc--atgaccaaagggattttcttt 634
|||||||||||| ||||||||||| || || | || ||||||| |||| |||||||
Sbjct: 334 aaagagaatctcggcatcaccagggcggcgcntgaccngatgaccagcgggantttcttt 275
Query: 635 ccagaagccttctcaaatgcattgactatctc-caacactgatgttccttttccggttcc 693
|||||||||||||| ||||||||||||||| | ||||||||| || || ||||| || ||
Sbjct: 274 ccagaagccttctcgaatgcattgactatcgcncaacactgacgtcccntttccagtccc 215
Query: 694 aaggttgtatgcttcacatcctatgttagatgagctttcaaaaagcttccttaatgcgaa 753
||||||||||| |||||||||||||||||| || | ||||||||||||| || |||
Sbjct: 214 aaggttgtatggttcacatcctatgttagacgaantatcaaaaagcttccgtagtgcagc 155
Query: 754 aagatgtccttcagcaaggtcaaccacatgagatataatcacgaacccctgtcccatcct 813
|| ||| || |||||||| |||| ||||||| |||||||| || ||||| |||||||| |
Sbjct: 154 aatatgcccctcagcaagatcaagcacatga-atataatctcgtaccccggtcccatctt 96
Query: 814 ttgttgcgtagttatttccaaatattgttagcgatggcctcctgccaactgcaatttgct 873
| ||||| ||| |||||||||| ||||| | || |||||||| ||||| |||| |||||
Sbjct: 95 tagttgcatagntatttccaaagattgtcactgacggcctcctcccaacagcaacttgct 36
Query: 874 gaacgaagggcataaggttgtt 895
||||| ||||||||||||||||
Sbjct: 35 gaacgtagggcataaggttgtt 14
>gb|CA647598.1|CA647598 wre1n.pk0112.c5 wre1n Triticum aestivum cDNA clone wre1n.pk0112.c5
5' end, mRNA sequence
Length = 367
Score = 151 bits (76), Expect = 1e-034
Identities = 133/152 (87%)
Strand = Plus / Minus
Query: 786 atataatcacgaacccctgtcccatcctttgttgcgtagttatttccaaatattgttagc 845
|||||||| || ||||| |||||||| || ||||| |||||||||||||| ||||| |
Sbjct: 155 atataatctcgtaccccagtcccatctttagttgcatagttatttccaaagattgtcact 96
Query: 846 gatggcctcctgccaactgcaatttgctgaacgaagggcataaggttgttaggagttcca 905
|| |||||||| ||||| |||| |||||||||| |||||||||||||||| ||| ||||
Sbjct: 95 gacggcctcctcccaacagcaacttgctgaacgtagggcataaggttgtttggaactcca 36
Query: 906 catgggtcttcaccaaggtatccactggggtg 937
| ||||||||||||||||||||||||||||||
Sbjct: 35 cgtgggtcttcaccaaggtatccactggggtg 4
>gb|CA647287.1|CA647287 wre1n.pk0116.h1 wre1n Triticum aestivum cDNA clone wre1n.pk0116.h1
5' end, mRNA sequence
Length = 290
Score = 147 bits (74), Expect = 2e-033
Identities = 101/110 (91%)
Strand = Plus / Minus
Query: 614 atgaccaaagggattttctttccagaagccttctcaaatgcattgactatctccaacact 673
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 120 atgaccagcgggattttctttccagaagccttctcgaatgcattgactatctccaacact 61
Query: 674 gatgttccttttccggttccaaggttgtatgcttcacatcctatgttaga 723
|| || || ||||| || ||||||||||||| ||||||||||||||||||
Sbjct: 60 gacgtcccctttccagtcccaaggttgtatggttcacatcctatgttaga 11
>gb|CD491409.1|CD491409 WHE3087_A06_A11ZT CS wheat cold-stressed seedling subtracted cDNA
library Triticum aestivum cDNA clone WHE3087_A06_A11,
mRNA sequence
Length = 697
Score = 107 bits (54), Expect = 2e-021
Identities = 126/150 (84%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctccgcacatttctgtgatgccatatttcgctttcc 542
||||||| ||||||||||| |||||| |||||||||| |||||||||||| || ||||
Sbjct: 413 tcttgctcgcccagttccattggtctctgcacatttctccgatgccatattttgccttcc 472
Query: 543 agtggagctctctctctgcttttgccggcgatgaaaagagaatctcagcatcaccaggac 602
| | || |||||||||||||| || | || |||||||||||||||||||||||||| |
Sbjct: 473 acttgaattctctctctgctttagcagctgacgaaaagagaatctcagcatcaccagggc 532
Query: 603 gccgttggcccatgaccaaagggattttct 632
| ||| | || || |||||||| |||||||
Sbjct: 533 gtcgtggaccaataaccaaaggtattttct 562
Score = 52.0 bits (26), Expect = 8e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 187 caagaaatagaattgaattagctggttgactatagcaa 224
||||||| |||||||||||||||| ||||||||||||
Sbjct: 135 caagaaaaagaattgaattagctgactgactatagcaa 172
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 334 tgtatgaccgaccgactagatctacat 360
|||||||| ||||||||||||||||||
Sbjct: 266 tgtatgactgaccgactagatctacat 292
>gb|CA661459.1|CA661459 wlmk1.pk0001.d7 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0001.d7
5' end, mRNA sequence
Length = 590
Score = 105 bits (53), Expect = 6e-021
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 476 taagggctcttgctagcccagttccacaggtctccgcacatttctgtgatgccatatttc 535
|||||| |||||||||||||||||||| |||| | |||||| || ||||||||||||||
Sbjct: 295 taagggttcttgctagcccagttccactggtccctgcacatctccgtgatgccatatttt 354
Query: 536 gctttccagtggagctctctctctgcttt 564
|||||||||| ||| ||||||||||||||
Sbjct: 355 gctttccagttgagttctctctctgcttt 383
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 196 gaattgaattagctggttgactatagcaa 224
||||||||||||||||| |||||||||||
Sbjct: 1 gaattgaattagctggtcgactatagcaa 29
>gb|CK196210.1|CK196210 FGAS004659 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 97.6 bits (49), Expect = 1e-018
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 476 taagggctcttgctagcccagttccacaggtctccgcacatttctgtgatgccatatttc 535
|||||| |||||||||||||||||||| |||| | |||||| || || |||||||||||
Sbjct: 562 taagggttcttgctagcccagttccactggtccctgcacatctccgttatgccatatttt 621
Query: 536 gctttccagtggagctctctctctgcttt 564
|||||||||| ||| ||||||||||||||
Sbjct: 622 gctttccagttgagttctctctctgcttt 650
Score = 52.0 bits (26), Expect = 8e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 195 agaattgaattagctggttgactatagcaa 224
|||||||||||||||||| |||||||||||
Sbjct: 267 agaattgaattagctggtcgactatagcaa 296
>gb|CA484453.1|CA484453 WHE4306_G02_M04ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4306_G02_M04, mRNA sequence
Length = 597
Score = 67.9 bits (34), Expect = 1e-009
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 623 gggattttctttccagaagccttctcaaatgcattgactatctccaacactgatgttcct 682
||||||||||| |||||| ||||||| |||||| || || |||||||| ||||| ||
Sbjct: 106 gggattttcttcccagaaaccttctcgaatgcagccaccatttccaacaccgatgtcccc 47
Query: 683 tttccggttccaaggttgtatgcttcacatccta 716
||||| || || ||||||||| ||||||||||||
Sbjct: 46 tttcctgtccccaggttgtatacttcacatccta 13
>gb|BE429450.1|BE429450 TAS000.C07R990618 ITEC TAS Wheat cDNA Library Triticum aestivum
cDNA clone TAS000.C07, mRNA sequence
Length = 486
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 155 tcttgctggcccagttccacaggtctctgcacat 122
>gb|BE429853.1|BE429853 TAS004.E02R990616 ITEC TAS Wheat cDNA Library Triticum aestivum
cDNA clone TAS004.E02, mRNA sequence
Length = 512
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 392 tcttgctggcccagttccacaggtctctgcacat 425
>gb|BJ295816.1|BJ295816 BJ295816 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl5j02 3', mRNA sequence
Length = 606
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 349 tcttgctggcccagttccacaggtctctgcacat 382
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 617 accaaagggattttctttccagaagccttctcaaatgc 654
|||| ||||||||||||||| |||||||||| |||||
Sbjct: 483 accagagggattttctttccgcaagccttctcgaatgc 520
>gb|BU099275.1|BU099275 WHE3305_F03_K05ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3305_F03_K05,
mRNA sequence
Length = 544
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 331 tcttgctggcccagttccacaggtctctgcacat 364
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 465 accagagggattttctttccgcaagccttctcgaatgca 503
>gb|CA609684.1|CA609684 wr1.pk0111.b7 wr1 Triticum aestivum cDNA clone wr1.pk0111.b7 5'
end, mRNA sequence
Length = 568
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 207 tcttgctggcccagttccacaggtctctgcacat 174
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 73 accagagggattttctttccgcaagccttctcgaatgca 35
>gb|CA620492.1|CA620492 wl1n.pk0057.d4 wl1n Triticum aestivum cDNA clone wl1n.pk0057.d4 5'
end, mRNA sequence
Length = 571
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 206 tcttgctggcccagttccacaggtctctgcacat 173
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 72 accagagggattttctttccgcaagccttctcgaatgca 34
>gb|CA643335.1|CA643335 wre1n.pk0072.d5 wre1n Triticum aestivum cDNA clone wre1n.pk0072.d5
5' end, mRNA sequence
Length = 598
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 257 tcttgctggcccagttccacaggtctctgcacat 224
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 123 accagagggattttctttccgcaagccttctcgaatgca 85
>gb|CD864167.1|CD864167 AZO1.109F13F000829 AZO1 Triticum aestivum cDNA clone AZO1109F13,
mRNA sequence
Length = 580
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 226 tcttgctggcccagttccacaggtctctgcacat 193
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgc 654
|||| ||||||||||||||| |||||||||| |||||
Sbjct: 92 accagagggattttctttccgcaagccttctcgaatgc 55
>gb|CD882667.1|CD882667 F1.110K22R010628 F1 Triticum aestivum cDNA clone F1110K22, mRNA
sequence
Length = 588
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 346 tcttgctggcccagttccacaggtctctgcacat 379
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 617 accaaagggattttctttccagaagccttctcaaatgc 654
|||| ||||||||||||||| |||||||||| |||||
Sbjct: 480 accagagggattttctttccgcaagccttctcgaatgc 517
>gb|CD905845.1|CD905845 G468.103A18F010809 G468 Triticum aestivum cDNA clone G468103A18,
mRNA sequence
Length = 526
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 341 tcttgctggcccagttccacaggtctctgcacat 308
>gb|CD938611.1|CD938611 OV.110H18R010406 OV Triticum aestivum cDNA clone OV110H18, mRNA
sequence
Length = 607
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 361 tcttgctggcccagttccacaggtctctgcacat 394
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 495 accagagggattttctttccgcaagccttctcgaatgca 533
>gb|AJ602763.1|AJ602763 AJ602763 T06 Triticum aestivum cDNA clone E06_T06_plate_25, mRNA
sequence
Length = 269
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 117 tcttgctggcccagttccacaggtctctgcacat 84
>gb|CK162546.1|CK162546 FGAS015142 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1091
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 780 tcttgctggcccagttccacaggtctctgcacat 747
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgc 654
|||| ||||||||||||||| |||||||||| |||||
Sbjct: 646 accagagggattttctttccgcaagccttctcgaatgc 609
>gb|AL811339.1|AL811339 AL811339 d:37 Triticum aestivum cDNA clone G06_d37_plate_4, mRNA
sequence
Length = 423
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||||||||||||||||| ||||||
Sbjct: 182 tcttgctggcccagttccacaggtctctgcacat 149
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 47 accagagggattttctttccgcaagccttctcgaatgca 9
>gb|CA632642.1|CA632642 wle1n.pk0060.a2 wle1n Triticum aestivum cDNA clone wle1n.pk0060.a2
5' end, mRNA sequence
Length = 212
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 476 taagggctcttgctagcccagttccacaggtctccgcacat 516
|||||| |||||||||||||||||||| |||| | ||||||
Sbjct: 49 taagggttcttgctagcccagttccactggtccctgcacat 9
>gb|BE429088.1|BE429088 MTD014.C05F990621 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD014.C05, mRNA
sequence
Length = 385
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 283 accagagggattttctttccgcaagccttctcgaatgca 245
>gb|BJ218914.1|BJ218914 BJ218914 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh30o16 3', mRNA sequence
Length = 463
Score = 46.1 bits (23), Expect = 0.005
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||| ||||||||||||| ||||||
Sbjct: 355 tcttgctggcccanttccacaggtctctgcacat 388
>gb|BQ620368.1|BQ620368 TaLr1166H03R TaLr1 Triticum aestivum cDNA clone TaLr1166H03R, mRNA
sequence
Length = 524
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 481 accagagggattttctttccgcaagccttctcgaatgca 443
>gb|CA498544.1|CA498544 WHE3244_G06_N12ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3244_G06_N12, mRNA sequence
Length = 694
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 635 accagagggattttctttccgcaagccttctcgaatgca 597
>gb|CA644986.1|CA644986 wre1n.pk0085.f8 wre1n Triticum aestivum cDNA clone wre1n.pk0085.f8
5' end, mRNA sequence
Length = 615
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgca 655
|||| ||||||||||||||| |||||||||| ||||||
Sbjct: 190 accagagggattttctttccgcaagccttctcgaatgca 152
>gb|CD938609.1|CD938609 OV.110H16R010406 OV Triticum aestivum cDNA clone OV110H16, mRNA
sequence
Length = 508
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctc 509
||||||| |||||||||||||||||||
Sbjct: 360 tcttgctggcccagttccacaggtctc 386
>gb|BE591927.1|BE591927 WHE1651-1654_I19_I19ZS Wheat heat stressed flag leaf cDNA library
Triticum aestivum cDNA clone WHE1651-1654_I19_I19, mRNA
sequence
Length = 449
Score = 44.1 bits (22), Expect = 0.019
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 483 tcttgctagcccagttccacaggtctccgcacat 516
||||||| ||||| ||||||||||||| ||||||
Sbjct: 340 tcttgctggcccatttccacaggtctctgcacat 373
>gb|BJ290807.1|BJ290807 BJ290807 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl20f04 5', mRNA sequence
Length = 414
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgc 654
|||| ||||||||||||||| |||||||||| |||||
Sbjct: 366 accagagggattttctttccgcaagccttctcgaatgc 329
>gb|BU672156.1|BU672156 WHE3301_C05_E09ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3301_C05_E09,
mRNA sequence
Length = 621
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgc 654
|||| ||||||||||||||| |||||||||| |||||
Sbjct: 546 accagagggattttctttccgcaagccttctcgaatgc 509
>gb|CA665709.1|CA665709 wlk1.pk0026.b8 wlk1 Triticum aestivum cDNA clone wlk1.pk0026.b8 5'
end, mRNA sequence
Length = 463
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgc 654
|||| ||||||||||||||| |||||||||| |||||
Sbjct: 193 accagagggattttctttccgcaagccttctcgaatgc 156
Score = 42.1 bits (21), Expect = 0.074
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 492 cccagttccacaggtctccgcacat 516
|||||||||||||||||| ||||||
Sbjct: 318 cccagttccacaggtctctgcacat 294
>gb|CD880379.1|CD880379 F1.001I23F001129 F1 Triticum aestivum cDNA clone F1001I23, mRNA
sequence
Length = 661
Score = 44.1 bits (22), Expect = 0.019
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 483 tcttgctagcccagttccacaggtct 508
||||||| ||||||||||||||||||
Sbjct: 403 tcttgctggcccagttccacaggtct 378
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 617 accaaagggattttctttccagaagccttctcaaatgc 654
|||| ||||||||||||||| |||||||||| |||||
Sbjct: 269 accagagggattttctttccgcaagccttctcgaatgc 232
>gb|CK193679.1|CK193679 FGAS002095 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 894
Score = 44.1 bits (22), Expect = 0.019
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 195 agaattgaattagctggttgactatagcaa 224
|||||||||||||||||| |||||| ||||
Sbjct: 255 agaattgaattagctggtcgactattgcaa 284
>gb|AL823053.1|AL823053 AL823053 p:133 Triticum aestivum cDNA clone E09_p133_plate_10, mRNA
sequence
Length = 381
Score = 42.1 bits (21), Expect = 0.074
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 622 agggattttctttccagaagccttctcaaatgc 654
||||||||||||||| |||||||||| |||||
Sbjct: 381 agggattttctttccgcaagccttctcgaatgc 349
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 165,566
Number of Sequences: 636343
Number of extensions: 165566
Number of successful extensions: 43307
Number of sequences better than 0.5: 41
Number of HSP's better than 0.5 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43223
Number of HSP's gapped (non-prelim): 81
length of query: 1019
length of database: 367,240,239
effective HSP length: 20
effective length of query: 999
effective length of database: 354,513,379
effective search space: 354158865621
effective search space used: 354158865621
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)