BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802264.2.1
(1189 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA621640.1|CA621640 wl1n.pk0075.f11 wl1n Triticum aestiv... 70 4e-010
gb|CK207750.1|CK207750 FGAS019412 Triticum aestivum FGAS: L... 62 9e-008
gb|CK214959.1|CK214959 FGAS026903 Triticum aestivum FGAS: L... 62 9e-008
gb|CV778572.1|CV778572 FGAS072981 Triticum aestivum FGAS: L... 56 6e-006
gb|BJ243270.1|BJ243270 BJ243270 Y. Ogihara unpublished cDNA... 52 9e-005
gb|BE426735.1|BE426735 WHE0331_A08_B15ZS Wheat unstressed s... 50 4e-004
gb|BQ237831.1|BQ237831 TaE05011F10F TaE05 Triticum aestivum... 50 4e-004
gb|BQ620292.1|BQ620292 TaLr1173C12R TaLr1 Triticum aestivum... 50 4e-004
gb|BQ620387.1|BQ620387 TaLr1165D09R TaLr1 Triticum aestivum... 50 4e-004
gb|CD868954.1|CD868954 AZO2.110E12R010329 AZO2 Triticum aes... 50 4e-004
gb|CD869512.1|CD869512 AZO2.111N11F001124 AZO2 Triticum aes... 50 4e-004
gb|CD893365.1|CD893365 G118.123I07R011115 G118 Triticum aes... 50 4e-004
gb|CD901745.1|CD901745 G356.104M15R011024 G356 Triticum aes... 50 4e-004
gb|CD926926.1|CD926926 GR45.100G13F010302 GR45 Triticum aes... 50 4e-004
gb|CD926927.1|CD926927 GR45.100G13R010607 GR45 Triticum aes... 50 4e-004
gb|CD939289.1|CD939289 OV.113B03R010409 OV Triticum aestivu... 50 4e-004
gb|CN008704.1|CN008704 WHE2644_B09_D18ZE Wheat Fusarium gra... 50 4e-004
gb|BQ171426.1|BQ171426 WHE1789_E12_J23ZY Wheat pre-anthesis... 48 0.001
gb|BQ243798.1|BQ243798 TaE15008G07F TaE15 Triticum aestivum... 48 0.001
gb|BQ246543.1|BQ246543 TaE15008G07R TaE15 Triticum aestivum... 48 0.001
gb|CA710781.1|CA710781 wdk2c.pk016.f22 wdk2c Triticum aesti... 48 0.001
gb|CD896167.1|CD896167 G174.102A02F010822 G174 Triticum aes... 48 0.001
gb|CD890769.1|CD890769 G118.115G09F010718 G118 Triticum aes... 46 0.006
gb|DR734012.1|DR734012 FGAS079769 Triticum aestivum FGAS: L... 46 0.006
gb|BG608158.1|BG608158 WHE2497_F01_L01ZS Triticum monococcu... 44 0.022
gb|BM135706.1|BM135706 WHE2623_B04_D07ZS Wheat Fusarium gra... 44 0.022
gb|BJ249314.1|BJ249314 BJ249314 Y. Ogihara unpublished cDNA... 44 0.022
gb|BQ167066.1|BQ167066 WHE0923_C03_F05ZY Wheat 5-15 DAP spi... 44 0.022
gb|BQ238015.1|BQ238015 TaE05009E02F TaE05 Triticum aestivum... 44 0.022
gb|BQ838286.1|BQ838286 WHE2908_F08_L16ZS Wheat aluminum-str... 44 0.022
gb|CA704025.1|CA704025 wdk1c.pk007.d1 wdk1c Triticum aestiv... 44 0.022
gb|CA732076.1|CA732076 wlp1c.pk003.a5 wlp1c Triticum aestiv... 44 0.022
gb|CD490375.1|CD490375 WHE2497_F01_L01ZT Triticum monococcu... 44 0.022
gb|CD869248.1|CD869248 AZO2.111C04R010521 AZO2 Triticum aes... 44 0.022
gb|CD888519.1|CD888519 G118.108E23R010925 G118 Triticum aes... 44 0.022
gb|CD934705.1|CD934705 OV.001L14F000912 OV Triticum aestivu... 44 0.022
gb|CD935098.1|CD935098 OV.002P23F010109 OV Triticum aestivu... 44 0.022
gb|BE398846.1|BE398846 WHE0027.A04F990514 ITEC WHE Wheat En... 42 0.087
gb|BE398979.1|BE398979 WHE0028.H04F990514 ITEC WHE Wheat En... 42 0.087
gb|BE414800.1|BE414800 MWL003.B01F990507 ITEC MWL Wheat Roo... 42 0.087
gb|BJ236192.1|BJ236192 BJ236192 Y. Ogihara unpublished cDNA... 42 0.087
gb|BJ241528.1|BJ241528 BJ241528 Y. Ogihara unpublished cDNA... 42 0.087
gb|BQ239068.1|BQ239068 TaE05037F03R TaE05 Triticum aestivum... 42 0.087
gb|CA705962.1|CA705962 wdk1c.pk022.c1 wdk1c Triticum aestiv... 42 0.087
gb|BQ168009.1|BQ168009 WHE0028.H04F990514ZK Cheyenne wheat ... 42 0.087
gb|CD868978.1|CD868978 AZO2.110F12F001114 AZO2 Triticum aes... 42 0.087
gb|CD895111.1|CD895111 G174.001A05R011120 G174 Triticum aes... 42 0.087
gb|CD901744.1|CD901744 G356.104M15F010918 G356 Triticum aes... 42 0.087
gb|CD936177.1|CD936177 OV.103P02R010430 OV Triticum aestivu... 42 0.087
gb|CK205296.1|CK205296 FGAS016764 Triticum aestivum FGAS: L... 42 0.087
gb|CK207150.1|CK207150 FGAS018767 Triticum aestivum FGAS: L... 42 0.087
gb|AJ612009.1|AJ612009 AJ612009 Triticum turgidum subsp. du... 42 0.087
gb|CV760011.1|CV760011 FGAS054395 Triticum aestivum FGAS: L... 42 0.087
gb|CV760797.1|CV760797 FGAS055183 Triticum aestivum FGAS: L... 42 0.087
gb|BE422584.1|BE422584 WHE0055_C07_E13ZS Wheat endosperm cD... 40 0.34
gb|BJ236454.1|BJ236454 BJ236454 Y. Ogihara unpublished cDNA... 40 0.34
gb|BQ247074.1|BQ247074 TaE15001F10R TaE15 Triticum aestivum... 40 0.34
gb|BQ806910.1|BQ806910 WHE3584_E10_I20ZS Wheat developing g... 40 0.34
gb|CD893364.1|CD893364 G118.123I07F010828 G118 Triticum aes... 40 0.34
gb|AY772733.1| Triticum aestivum clone BAC TA1426L2, *** SE... 40 0.34
>gb|CA621640.1|CA621640 wl1n.pk0075.f11 wl1n Triticum aestivum cDNA clone wl1n.pk0075.f11
5' end, mRNA sequence
Length = 438
Score = 69.9 bits (35), Expect = 4e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgacggcttc 822
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 ggcgccatggtcggcgggcccgacaagaacgacggcttc 47
>gb|CK207750.1|CK207750 FGAS019412 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1140
Score = 61.9 bits (31), Expect = 9e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 766 aaccccaacgagctcaccggcgccatcgtcggcgggccc 804
|||||||||| |||||||||||||||||| |||||||||
Sbjct: 483 aaccccaacgtgctcaccggcgccatcgttggcgggccc 445
>gb|CK214959.1|CK214959 FGAS026903 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1118
Score = 61.9 bits (31), Expect = 9e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 766 aaccccaacgagctcaccggcgccatcgtcggcgggccc 804
|||||||||| |||||||||||||||||| |||||||||
Sbjct: 475 aaccccaacgtgctcaccggcgccatcgttggcgggccc 437
>gb|CV778572.1|CV778572 FGAS072981 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 56.0 bits (28), Expect = 6e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 764 ccaaccccaacgagctcaccggcgccatcgtcggcgggcccgac 807
|||| ||||||| |||| |||||||||||||||||||||||||
Sbjct: 187 ccaatcccaacgtgctcgtcggcgccatcgtcggcgggcccgac 230
>gb|BJ243270.1|BJ243270 BJ243270 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf10g01 5', mRNA sequence
Length = 607
Score = 52.0 bits (26), Expect = 9e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 139 tgccccttctactgctcctactcgggctacaacgacgagctgctgtgggc 188
||||||||||||||||||||||| |||| | | || |||||||| |||||
Sbjct: 264 tgccccttctactgctcctactccggcttccaggatgagctgctctgggc 313
>gb|BE426735.1|BE426735 WHE0331_A08_B15ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0331_A08_B15, mRNA
sequence
Length = 590
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 552 ggcgccatggtcggcgggccggacaagaacgac 584
>gb|BQ237831.1|BQ237831 TaE05011F10F TaE05 Triticum aestivum cDNA clone TaE05011F10F, mRNA
sequence
Length = 489
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 488 ggcgccatggtcggcgggccggacaagaacgac 456
>gb|BQ620292.1|BQ620292 TaLr1173C12R TaLr1 Triticum aestivum cDNA clone TaLr1173C12R, mRNA
sequence
Length = 578
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 475 ggcgccatggtcggcgggccggacaagaacgac 443
>gb|BQ620387.1|BQ620387 TaLr1165D09R TaLr1 Triticum aestivum cDNA clone TaLr1165D09R, mRNA
sequence
Length = 594
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 475 ggcgccatggtcggcgggccggacaagaacgac 443
>gb|CD868954.1|CD868954 AZO2.110E12R010329 AZO2 Triticum aestivum cDNA clone AZO2110E12,
mRNA sequence
Length = 523
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 479 ggcgccatggtcggcgggccggacaagaacgac 447
>gb|CD869512.1|CD869512 AZO2.111N11F001124 AZO2 Triticum aestivum cDNA clone AZO2111N11,
mRNA sequence
Length = 660
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 393 ggcgccatggtcggcgggccggacaagaacgac 425
>gb|CD893365.1|CD893365 G118.123I07R011115 G118 Triticum aestivum cDNA clone G118123I07,
mRNA sequence
Length = 588
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 479 ggcgccatggtcggcgggccggacaagaacgac 447
>gb|CD901745.1|CD901745 G356.104M15R011024 G356 Triticum aestivum cDNA clone G356104M15,
mRNA sequence
Length = 555
Score = 50.1 bits (25), Expect = 4e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 783 cggcgccatcgtcggcgggcccgac 807
|||||||||||||||||||||||||
Sbjct: 429 cggcgccatcgtcggcgggcccgac 405
>gb|CD926926.1|CD926926 GR45.100G13F010302 GR45 Triticum aestivum cDNA clone GR45100G13,
mRNA sequence
Length = 722
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 422 ggcgccatggtcggcgggccggacaagaacgac 454
>gb|CD926927.1|CD926927 GR45.100G13R010607 GR45 Triticum aestivum cDNA clone GR45100G13,
mRNA sequence
Length = 612
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 477 ggcgccatggtcggcgggccggacaagaacgac 445
>gb|CD939289.1|CD939289 OV.113B03R010409 OV Triticum aestivum cDNA clone OV113B03, mRNA
sequence
Length = 667
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| ||||||||||| ||||||||||||
Sbjct: 479 ggcgccatggtcggcgggccggacaagaacgac 447
>gb|CN008704.1|CN008704 WHE2644_B09_D18ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2644_B09_D18,
mRNA sequence
Length = 534
Score = 50.1 bits (25), Expect = 4e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 139 tgccccttctactgctcctactcgggctacaacgacgagctgctgtggg 187
||||||| ||||||||||||||| || ||| | ||||||||||| ||||
Sbjct: 138 tgcccctactactgctcctactccggataccaggacgagctgctatggg 186
>gb|BQ171426.1|BQ171426 WHE1789_E12_J23ZY Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1789_E12_J23, mRNA sequence
Length = 276
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 766 aaccccaacgagctcaccggcgccatcgtcggcgggcccgacaagaacgacg 817
|||||||||| || ||||||||| ||||||||||||| || |||||||||
Sbjct: 256 aaccccaacgtgcataccggcgccgtcgtcggcgggccggatgagaacgacg 205
>gb|BQ243798.1|BQ243798 TaE15008G07F TaE15 Triticum aestivum cDNA clone TaE15008G07F, mRNA
sequence
Length = 535
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 766 aaccccaacgagctcaccggcgccatcgtcggcgggcccgacaagaacgacg 817
|||||||||| || ||||||||| ||||||||||||| || |||||||||
Sbjct: 305 aaccccaacgtgcataccggcgccgtcgtcggcgggccggatgagaacgacg 254
>gb|BQ246543.1|BQ246543 TaE15008G07R TaE15 Triticum aestivum cDNA clone TaE15008G07R, mRNA
sequence
Length = 698
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 766 aaccccaacgagctcaccggcgccatcgtcggcgggcccgacaagaacgacg 817
|||||||||| || ||||||||| ||||||||||||| || |||||||||
Sbjct: 629 aaccccaacgtgcataccggcgccgtcgtcggcgggccggatgagaacgacg 680
>gb|CA710781.1|CA710781 wdk2c.pk016.f22 wdk2c Triticum aestivum cDNA clone wdk2c.pk016.f22
5' end, mRNA sequence
Length = 321
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 766 aaccccaacgagctcaccggcgccatcgtcggcgggcccgacaagaacgacg 817
|||||||||| || ||||||||| ||||||||||||| || |||||||||
Sbjct: 160 aaccccaacgtgcataccggcgccgtcgtcggcgggccggatgagaacgacg 109
>gb|CD896167.1|CD896167 G174.102A02F010822 G174 Triticum aestivum cDNA clone G174102A02,
mRNA sequence
Length = 425
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 766 aaccccaacgagctcaccggcgccatcgtcggcgggcccgacaagaacgacg 817
|||||||||| || ||||||||| ||||||||||||| || |||||||||
Sbjct: 108 aaccccaacgtgcataccggcgccgtcgtcggcgggccggatgagaacgacg 159
>gb|CD890769.1|CD890769 G118.115G09F010718 G118 Triticum aestivum cDNA clone G118115G09,
mRNA sequence
Length = 680
Score = 46.1 bits (23), Expect = 0.006
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 166 tacaacgacgagctgctgtgggccgcgacctggctgtacctggcgac 212
|||| |||||||||||||||||| ||| | ||||||| || ||||||
Sbjct: 364 tacagcgacgagctgctgtgggcggcggcgtggctgttccaggcgac 410
Score = 40.1 bits (20), Expect = 0.34
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 273 gttcagctgggacctcaagttccccggcgcgcaggt 308
||||||||||||| |||||| | |||||| ||||||
Sbjct: 486 gttcagctgggacatcaagtacgccggcgtgcaggt 521
>gb|DR734012.1|DR734012 FGAS079769 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 977
Score = 46.1 bits (23), Expect = 0.006
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 465 gcagtacgtgaccagcacggcgttcctgctg 495
|||||||||||||| | ||||||||||||||
Sbjct: 294 gcagtacgtgaccaacgcggcgttcctgctg 324
>gb|BG608158.1|BG608158 WHE2497_F01_L01ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2497_F01_L01,
mRNA sequence
Length = 451
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||| |||||||| || ||||||||||||
Sbjct: 20 cggcgccatggtcggcggcccggacaagaacgac 53
>gb|BM135706.1|BM135706 WHE2623_B04_D07ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2623_B04_D07,
mRNA sequence
Length = 563
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||||||||| ||||| ||||| ||||||
Sbjct: 461 cggcgccatcgtcggagggcctgacaacaacgac 494
>gb|BJ249314.1|BJ249314 BJ249314 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf10g01 3', mRNA sequence
Length = 613
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||||||||| ||||| ||| ||||||||
Sbjct: 352 cggcgccatcgtcggagggcctgacgagaacgac 319
>gb|BQ167066.1|BQ167066 WHE0923_C03_F05ZY Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0923_C03_F05, mRNA sequence
Length = 281
Score = 44.1 bits (22), Expect = 0.022
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 768 ccccaacgagctcaccggcgccatcgtcggcgggcccgacaagaacgacg 817
|||||||| || ||||||||| ||||||||||||| || |||||||||
Sbjct: 281 ccccaacgtgcataccggcgccgtcgtcggcgggccggatgagaacgacg 232
>gb|BQ238015.1|BQ238015 TaE05009E02F TaE05 Triticum aestivum cDNA clone TaE05009E02F, mRNA
sequence
Length = 546
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||||||||| ||||| ||||| ||||||
Sbjct: 228 cggcgccatcgtcggagggcctgacaacaacgac 195
Score = 42.1 bits (21), Expect = 0.087
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 666 gcagccgcaccaccgcggcgc 686
|||||||||||||||||||||
Sbjct: 345 gcagccgcaccaccgcggcgc 325
>gb|BQ838286.1|BQ838286 WHE2908_F08_L16ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2908_F08_L16, mRNA
sequence
Length = 561
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||| |||||||| || ||||||||||||
Sbjct: 430 cggcgccatggtcggcggcccggacaagaacgac 463
>gb|CA704025.1|CA704025 wdk1c.pk007.d1 wdk1c Triticum aestivum cDNA clone wdk1c.pk007.d1 5'
end, mRNA sequence
Length = 457
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||||||||| ||||| ||||| ||||||
Sbjct: 266 cggcgccatcgtcggagggcctgacaacaacgac 233
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 666 gcagccgcaccaccgcggcg 685
||||||||||||||||||||
Sbjct: 383 gcagccgcaccaccgcggcg 364
>gb|CA732076.1|CA732076 wlp1c.pk003.a5 wlp1c Triticum aestivum cDNA clone wlp1c.pk003.a5 5'
end, mRNA sequence
Length = 591
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||| |||||||| || ||||||||||||
Sbjct: 111 cggcgccatggtcggcggcccggacaagaacgac 144
>gb|CD490375.1|CD490375 WHE2497_F01_L01ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2497_F01_L01, mRNA sequence
Length = 480
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||| |||||||| || ||||||||||||
Sbjct: 431 cggcgccatggtcggcggcccggacaagaacgac 398
>gb|CD869248.1|CD869248 AZO2.111C04R010521 AZO2 Triticum aestivum cDNA clone AZO2111C04,
mRNA sequence
Length = 516
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||| |||||||| || ||||||||||||
Sbjct: 131 cggcgccatggtcggcggcccggacaagaacgac 98
>gb|CD888519.1|CD888519 G118.108E23R010925 G118 Triticum aestivum cDNA clone G118108E23,
mRNA sequence
Length = 452
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||||||||| ||||| ||||| ||||||
Sbjct: 272 cggcgccatcgtcggagggcctgacaacaacgac 239
Score = 42.1 bits (21), Expect = 0.087
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 666 gcagccgcaccaccgcggcgc 686
|||||||||||||||||||||
Sbjct: 389 gcagccgcaccaccgcggcgc 369
>gb|CD934705.1|CD934705 OV.001L14F000912 OV Triticum aestivum cDNA clone OV001L14, mRNA
sequence
Length = 260
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||| |||||||| || ||||||||||||
Sbjct: 135 cggcgccatggtcggcggcccggacaagaacgac 168
>gb|CD935098.1|CD935098 OV.002P23F010109 OV Triticum aestivum cDNA clone OV002P23, mRNA
sequence
Length = 636
Score = 44.1 bits (22), Expect = 0.022
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 783 cggcgccatcgtcggcgggcccgacaagaacgac 816
||||||||| |||||||| || ||||||||||||
Sbjct: 511 cggcgccatggtcggcggcccggacaagaacgac 544
>gb|BE398846.1|BE398846 WHE0027.A04F990514 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0027.A04, mRNA sequence
Length = 412
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 781 accggcgccatcgtcggcgggcccgacaagaacgacg 817
||||||||| ||||||||||||| || |||||||||
Sbjct: 247 accggcgccgtcgtcggcgggccggatgagaacgacg 211
>gb|BE398979.1|BE398979 WHE0028.H04F990514 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0028.H04, mRNA sequence
Length = 358
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 781 accggcgccatcgtcggcgggcccgacaagaacgacg 817
||||||||| ||||||||||||| || |||||||||
Sbjct: 79 accggcgccgtcgtcggcgggccggatgagaacgacg 115
>gb|BE414800.1|BE414800 MWL003.B01F990507 ITEC MWL Wheat Root Library Triticum aestivum
cDNA clone MWL003.B01, mRNA sequence
Length = 340
Score = 42.1 bits (21), Expect = 0.087
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 269 ccgagttcagctgggacctcaagttccccggcg 301
||||||||||||||||| |||||| | ||||||
Sbjct: 190 ccgagttcagctgggacgtcaagtacgccggcg 222
>gb|BJ236192.1|BJ236192 BJ236192 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe20m09 5', mRNA sequence
Length = 316
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 781 accggcgccatcgtcggcgggcccgacaagaacgacg 817
||||||||| ||||||||||||| || |||||||||
Sbjct: 9 accggcgccgtcgtcggcgggccggatgagaacgacg 45
>gb|BJ241528.1|BJ241528 BJ241528 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe20m09 3', mRNA sequence
Length = 257
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 781 accggcgccatcgtcggcgggcccgacaagaacgacg 817
||||||||| ||||||||||||| || |||||||||
Sbjct: 244 accggcgccgtcgtcggcgggccggatgagaacgacg 208
>gb|BQ239068.1|BQ239068 TaE05037F03R TaE05 Triticum aestivum cDNA clone TaE05037F03R, mRNA
sequence
Length = 549
Score = 42.1 bits (21), Expect = 0.087
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| |||||||| || ||||||||||||
Sbjct: 151 ggcgccatggtcggcggcccggacaagaacgac 183
>gb|CA705962.1|CA705962 wdk1c.pk022.c1 wdk1c Triticum aestivum cDNA clone wdk1c.pk022.c1 5'
end, mRNA sequence
Length = 427
Score = 42.1 bits (21), Expect = 0.087
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 788 ccatcgtcggcgggcccgacaagaacgac 816
|||| ||||||||||| ||||||||||||
Sbjct: 1 ccatggtcggcgggccggacaagaacgac 29
>gb|BQ168009.1|BQ168009 WHE0028.H04F990514ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0028.H04F990514, mRNA sequence
Length = 310
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 781 accggcgccatcgtcggcgggcccgacaagaacgacg 817
||||||||| ||||||||||||| || |||||||||
Sbjct: 294 accggcgccgtcgtcggcgggccggatgagaacgacg 258
>gb|CD868978.1|CD868978 AZO2.110F12F001114 AZO2 Triticum aestivum cDNA clone AZO2110F12,
mRNA sequence
Length = 600
Score = 42.1 bits (21), Expect = 0.087
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| | ||||||||| ||||||||||||
Sbjct: 394 ggcgccatggacggcgggccggacaagaacgac 426
>gb|CD895111.1|CD895111 G174.001A05R011120 G174 Triticum aestivum cDNA clone G174001A05,
mRNA sequence
Length = 666
Score = 42.1 bits (21), Expect = 0.087
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| |||||||| || ||||||||||||
Sbjct: 470 ggcgccatggtcggcggcccggacaagaacgac 438
>gb|CD901744.1|CD901744 G356.104M15F010918 G356 Triticum aestivum cDNA clone G356104M15,
mRNA sequence
Length = 632
Score = 42.1 bits (21), Expect = 0.087
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 269 ccgagttcagctgggacctcaagttccccggcg 301
||||||||||||||||| |||||| | ||||||
Sbjct: 305 ccgagttcagctgggacgtcaagtacgccggcg 337
>gb|CD936177.1|CD936177 OV.103P02R010430 OV Triticum aestivum cDNA clone OV103P02, mRNA
sequence
Length = 638
Score = 42.1 bits (21), Expect = 0.087
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 784 ggcgccatcgtcggcgggcccgacaagaacgac 816
|||||||| |||||||| || ||||||||||||
Sbjct: 474 ggcgccatggtcggcggcccggacaagaacgac 442
>gb|CK205296.1|CK205296 FGAS016764 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1024
Score = 42.1 bits (21), Expect = 0.087
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 783 cggcgccatcgtcggcgggcccgac 807
||||||||| |||||||||||||||
Sbjct: 470 cggcgccattgtcggcgggcccgac 446
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 351,750
Number of Sequences: 636343
Number of extensions: 351750
Number of successful extensions: 106528
Number of sequences better than 0.5: 60
Number of HSP's better than 0.5 without gapping: 59
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 106356
Number of HSP's gapped (non-prelim): 172
length of query: 1189
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1169
effective length of database: 354,513,379
effective search space: 414426140051
effective search space used: 414426140051
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)