BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3665414.2.1
(3330 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ241415.1|BQ241415 TaE05005D10R TaE05 Triticum aestivum... 416 e-114
gb|CV760247.1|CV760247 FGAS054631 Triticum aestivum FGAS: L... 347 3e-093
gb|CK193811.1|CK193811 FGAS002228 Triticum aestivum FGAS: L... 327 3e-087
gb|BE499683.1|BE499683 WHE0959_E08_I15ZS Wheat pre-anthesis... 325 1e-086
gb|CK194149.1|CK194149 FGAS002568 Triticum aestivum FGAS: L... 289 6e-076
gb|CV769672.1|CV769672 FGAS064064 Triticum aestivum FGAS: L... 274 4e-071
gb|BQ238335.1|BQ238335 TaE05005D10F TaE05 Triticum aestivum... 250 5e-064
gb|BJ268735.1|BJ268735 BJ268735 Y. Ogihara unpublished cDNA... 143 9e-032
gb|CA745936.1|CA745936 wri2s.pk003.d14 wri2s Triticum aesti... 133 9e-029
gb|CA745566.1|CA745566 wri2s.pk001.n6 wri2s Triticum aestiv... 64 7e-008
gb|BE411972.1|BE411972 JJL001.B09R990511 ITEC JJL Wheat Lea... 62 3e-007
gb|CA616725.1|CA616725 wl1n.pk0005.g6 wl1n Triticum aestivu... 48 0.004
gb|CA618657.1|CA618657 wl1n.pk0036.f9 wl1n Triticum aestivu... 48 0.004
gb|CA624340.1|CA624340 wl1n.pk0116.h4 wl1n Triticum aestivu... 48 0.004
gb|CA625458.1|CA625458 wl1n.pk0139.c1 wl1n Triticum aestivu... 48 0.004
gb|CA627325.1|CA627325 wl1n.pk150.d11 wl1n Triticum aestivu... 48 0.004
gb|DR738890.1|DR738890 FGAS084107 Triticum aestivum FGAS: L... 48 0.004
gb|CA671064.1|CA671064 wlsu2.pk0004.d10 wlsu2 Triticum aest... 44 0.062
gb|CA674412.1|CA674412 wlsu2.pk023.j12 wlsu2 Triticum aesti... 44 0.062
gb|CA745528.1|CA745528 wri2s.pk001.l14 wri2s Triticum aesti... 44 0.062
gb|CA746610.1|CA746610 wri2s.pk004.o16 wri2s Triticum aesti... 44 0.062
gb|CA746861.1|CA746861 wri2s.pk004.p20 wri2s Triticum aesti... 44 0.062
gb|CN009977.1|CN009977 WHE3865_A08_B15ZS Wheat Fusarium gra... 44 0.062
gb|CV778478.1|CV778478 FGAS072886 Triticum aestivum FGAS: L... 44 0.062
gb|BE470909.1|BE470909 WHE0280_C08_E16ZS Wheat drought-stre... 42 0.25
gb|BE515844.1|BE515844 WHE0606_E09_I18ZA Wheat ABA-treated ... 42 0.25
gb|CA617844.1|CA617844 wl1n.pk0025.h12 wl1n Triticum aestiv... 42 0.25
gb|CK159369.1|CK159369 FGAS040809 Triticum aestivum FGAS: T... 42 0.25
gb|CK159452.1|CK159452 FGAS040903 Triticum aestivum FGAS: T... 42 0.25
gb|CV763809.1|CV763809 FGAS058192 Triticum aestivum FGAS: L... 42 0.25
gb|CV763974.1|CV763974 FGAS058357 Triticum aestivum FGAS: L... 42 0.25
gb|DR732468.1|DR732468 FGAS078388 Triticum aestivum FGAS: T... 42 0.25
>gb|BQ241415.1|BQ241415 TaE05005D10R TaE05 Triticum aestivum cDNA clone TaE05005D10R, mRNA
sequence
Length = 614
Score = 416 bits (210), Expect = e-114
Identities = 413/480 (86%), Gaps = 3/480 (0%)
Strand = Plus / Plus
Query: 1454 ttggtatgggacatgggaatgtagagaagaacattctaaaaccaaggga---agatcccc 1510
|||||||||| |||| |||||||| |||||||| || |||||||| || |||||||
Sbjct: 135 ttggtatgggcaatggaaatgtagaaaagaacatgctgaaaccaagagatgaagatccct 194
Query: 1511 tacttgatagcgatgatgagagaccagatagcttcgatgacgatttcaggaagaaagaaa 1570
||||||| || |||||||| ||||| || ||||| ||||| || | |||| ||||||||
Sbjct: 195 tacttgacagtgatgatgaaagacctgagagctttgatgatgagctaaggaggaaagaaa 254
Query: 1571 tgagaaagggcatagatttggctaccacacttgaacgtattgaaaagaattttgtcatca 1630
| |||| ||| ||||| |||||||| |||||||||||||| || ||||| |||||||| |
Sbjct: 255 taagaaggggtatagacttggctactacacttgaacgtatcgagaagaactttgtcatta 314
Query: 1631 ccgacccgaggttaccagataatccaattatatttgcatcggatagctttttgcgtttga 1690
| ||||| || || ||||||||||| |||||||||||||| ||||| || |||| ||||
Sbjct: 315 ctgacccaagattgccagataatcctattatatttgcatccgatagtttcttgcaattga 374
Query: 1691 cagagtattgccgcgaagaaatattgggaagaaactgcaggtttcttcaaggacctgaaa 1750
| || || |||| |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 375 ctgaatacagccgtgaagaaatattgggaagaaactgcaggtttctccaaggtcctgaaa 434
Query: 1751 ctgaccgtgggacagtaaagaagataagagatgccatagataaccaaacagaagttactg 1810
|||| |||| ||||| | ||| || |||||||||||||||||||||||||| || ||||
Sbjct: 435 ctgatcgtgctacagtgaggaaaattagagatgccatagataaccaaacagaggtcactg 494
Query: 1811 ttcagctgataaattatacaaagagcggtaagaaattctggaacctctttcacttgcagc 1870
|||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 495 ttcagctgattaattatacaaagagtggtaaaaagttctggaacctctttcacttgcagc 554
Query: 1871 ctatgcgtgatcagaagggtgatgttcaatacttcattggggttcaattggatggaactg 1930
||||||||||||||||||| ||||| || || || ||||||||||| |||||||||||||
Sbjct: 555 ctatgcgtgatcagaagggagatgtccagtattttattggggttcagttggatggaactg 614
>gb|CV760247.1|CV760247 FGAS054631 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 884
Score = 347 bits (175), Expect = 3e-093
Identities = 420/501 (83%), Gaps = 3/501 (0%)
Strand = Plus / Plus
Query: 2544 agagaacattttacttcatagagatgggcacatttcattgacagactttgatttgtcttg 2603
|||||| || |||||||||||||| |||||||| || |||||||||||||||| |||||
Sbjct: 89 agagaatatcttacttcatagagacgggcacatatccctgacagactttgatttatcttg 148
Query: 2604 cttgacatcctgccgaccacaagtgtttcttccacacgatattgataagaagaaaaagag 2663
| ||||||| ||| |||| || || ||||||||| | || | ||| ||||||| ||
Sbjct: 149 cctgacatcttgcagaccgcaggtctttcttccagaagaa---ggtaataagaaaagtag 205
Query: 2664 gaggaagagcaggagtaatcccatattttttgctgaaccaatgcgagcatcaaattcttt 2723
|||||| ||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 206 gaggaaaagcaggagttcacccatattttttgcggaacctatgcgagcatccaattcatt 265
Query: 2724 tgttggtacagaggagtacattgcaccggagattattaccggagctggccatacgagtgc 2783
||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 266 tgttggtacagaggagtacatcgcacctgaaattattaccggagctggccatacaagtgc 325
Query: 2784 tgtagattggtgggcgctaggaattcttctatatgagatgttatatggttatacaccctt 2843
||| ||||||||||||||||| |||||||| ||||| ||| | |||||||| ||||||||
Sbjct: 326 tgttgattggtgggcgctagggattcttctgtatgaaatgctgtatggttacacaccctt 385
Query: 2844 cagagggaaaacaagacaaaggacatttgctaatattctgcacaaggatatcagatttcc 2903
|||||| ||||| || ||||| || ||||| || || || |||||||| |||||||||||
Sbjct: 386 cagaggtaaaaccaggcaaagaacctttgccaacatcctacacaaggacatcagatttcc 445
Query: 2904 tgcgagcatacaggtgagcctggcggcaaggcagctgatataccggttgctacaccgaga 2963
|||||| || ||||||||| | || ||||||||||| ||| ||||||| ||||| ||
Sbjct: 446 cgcgagcgtatcggtgagcctcccagcgaggcagctgatctacaggttgctgcaccggga 505
Query: 2964 ccctgcaaataggctaggttcctatgagggcgctatggagatcaaacaacaccccttctt 3023
||||| ||||| | || || |||||||| | | ||||| ||||||||||| |||||
Sbjct: 506 tcctgcgaatagaatgggatcgtatgagggatcgaacgagataaaacaacacccgttctt 565
Query: 3024 tcgtggcataaactgggctct 3044
|| ||||| |||||||||||
Sbjct: 566 ccgcggcatcaactgggctct 586
>gb|CK193811.1|CK193811 FGAS002228 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum
cDNA, mRNA sequence
Length = 824
Score = 327 bits (165), Expect = 3e-087
Identities = 313/361 (86%), Gaps = 1/361 (0%)
Strand = Plus / Minus
Query: 1705 gaagaaatattgggaagaaactgcaggtttcttcaaggacctgaaactgaccgtgggaca 1764
|||||||||| ||||||||| |||||||||| ||||| ||||||||||| |||| |||
Sbjct: 549 gaagaaatatagggaagaaatagcaggtttctccaaggtcctgaaactgatcgtgctaca 490
Query: 1765 gtaaagaagataagagatgccatagataaccaaacagaagttactgttcagctgata-aa 1823
|| | ||| || |||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 489 gtgaggaaaattagagatgccatagataaccaaacagaggtcactgttcagctgattgaa 430
Query: 1824 ttatacaaagagcggtaagaaattctggaacctctttcacttgcagcctatgcgtgatca 1883
|||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttatacaaagagtggtaaaaagttctggaacctctttcacttgcagcctatgcgtgatca 370
Query: 1884 gaagggtgatgttcaatacttcattggggttcaattggatggaactgagcgtgttcgaga 1943
|||||| ||||| || || || ||||||||||| |||||||||||||||| ||| |||||
Sbjct: 369 gaagggagatgtccagtattttattggggttcagttggatggaactgagcatgtccgaga 310
Query: 1944 ggctgctgcaaaagatggtgccatactggttaagaaaactgcagacaatattgatgaggc 2003
||||||| ||||| | | ||| ||| |||||||||||||||| |||||||| |||||
Sbjct: 309 tgctgctgaaaaagcgagggtcatcctgattaagaaaactgcagaaaatattgacgaggc 250
Query: 2004 tgcaaaggagcttccggatgctaatttgagacctgaggatctatgggctaatcactcaaa 2063
|||||| || ||||| |||||||||||||| || ||||| || |||| || ||||||||
Sbjct: 249 tgcaaaagaacttccagatgctaatttgaggccggaggacttaagggccaaccactcaaa 190
Query: 2064 a 2064
|
Sbjct: 189 a 189
>gb|BE499683.1|BE499683 WHE0959_E08_I15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0959_E08_I15, mRNA sequence
Length = 522
Score = 325 bits (164), Expect = 1e-086
Identities = 278/316 (87%)
Strand = Plus / Plus
Query: 982 tactgtggccgtatcctcaactacaagaaggatggcacaccattctggaacctcctaacc 1041
||||| |||||| ||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 5 tactgcggccgtgtcctcaactacaagaaggatggcacggcattctggaacctcctgacc 64
Query: 1042 gttgcccccataaaggatgaggatggcagggtcctcaagttcattgggatgcaagtggaa 1101
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 65 attgcccccatcaaggatgaggatggcagggtcctcaagttcatagggatgcaagtggaa 124
Query: 1102 gtaagtaagtacacggaaggtaacaaagatactgctcttcgtccaaatggattgccagag 1161
|| ||||| ||||| ||||| ||||| || |||| | |||||||||||||| ||||||||
Sbjct: 125 gtgagtaaatacactgaagggaacaaggacactgttgttcgtccaaatggactgccagag 184
Query: 1162 tcactcatcaaatatgatgcaaggcagaaggatcatgctcgtagctcagtctcggagctc 1221
|||||||||||||||||||| ||||||||||| || || ||||||||||| || |||||
Sbjct: 185 tcactcatcaaatatgatgccaggcagaaggaccaggcccgtagctcagtgtctgagctt 244
Query: 1222 ctacttgccctgaaggatccacggtcattgtcagaatcaagaaacaataccttaaaaagg 1281
|| | || || ||| | ||||||||||||||||||||||| || | ||||| |||||
Sbjct: 245 ctgttggctctcaagaacccacggtcattgtcagaatcaagtaatagcaccttcaaaaga 304
Query: 1282 aaatcacaggaatcag 1297
|| |||||||||||||
Sbjct: 305 aagtcacaggaatcag 320
>gb|CK194149.1|CK194149 FGAS002568 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum
cDNA, mRNA sequence
Length = 813
Score = 289 bits (146), Expect = 6e-076
Identities = 324/378 (85%), Gaps = 4/378 (1%)
Strand = Plus / Plus
Query: 746 tcccccgggtgtcggaggagcttcgcgccgcgctctcagcgttccagcagaccttcgtcg 805
||||||||||||| |||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 420 tcccccgggtgtccgaggagctccgggcggcgctctcggcgttccagcagacgttcgtcg 479
Query: 806 tgtccgatgccacccgccctgaccaccccatcctctacgccagcgctggattcttcaaca 865
|||| || |||| |||||| | |||||||||| | ||||||||||| || ||||||||||
Sbjct: 480 tgtcggacgccagccgccccggccaccccatcatgtacgccagcgccggcttcttcaaca 539
Query: 866 tgacgggctactcctccaatgaggtcgtcggaaggaactgccgcttccttcaaggttctg 925
|||| |||||| ||||||| ||||||||||||||||||||||||||||| || || || |
Sbjct: 540 tgaccggctacacctccaaggaggtcgtcggaaggaactgccgcttcctccagggctccg 599
Query: 926 ggaccgaccccgtagagatttccaagatcagacaggctctcgcagctgggtcaaattact 985
| |||||||| | ||||| | |||||||| |||||||| || | || ||||| ||||
Sbjct: 600 gcaccgacccggcggagatcgcaaagatcaggcaggctctagccgacggatcaaactact 659
Query: 986 gtggccgtatcctcaactacaagaaggatggcacaccattctggaacctcctaacc-gtt 1044
| |||||| ||| ||||||||||||||||||| |||||||||||||||| ||| ||
Sbjct: 660 gcggccgtgtccctcactacaagaaggatggcacggcattctggaacctcctgaccattt 719
Query: 1045 gcccccataaaggatgaggatggcagggtcctcaagttcat-tgggatgcaagtggaagt 1103
|||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 720 gcccccat-caggatgaggatggcagggtcctcaagttcataggggatgc-agtggaagt 777
Query: 1104 aagtaagtacacggaagg 1121
||||| ||||| |||||
Sbjct: 778 gagtaaatacactgaagg 795
Score = 67.9 bits (34), Expect = 4e-009
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 584 gggcgacacagagggccgccgagtggggcctcgtcctccagaccgacgagcacaccggcc 643
||||||| ||| |||| || |||||||||||||| ||||||||| |||||||||| ||||
Sbjct: 276 gggcgacgcagcgggcggcggagtggggcctcgtgctccagaccaacgagcacacgggcc 335
Query: 644 gcccccaggg 653
| || |||||
Sbjct: 336 ggccgcaggg 345
>gb|CV769672.1|CV769672 FGAS064064 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 1247
Score = 274 bits (138), Expect = 4e-071
Identities = 213/238 (89%)
Strand = Plus / Plus
Query: 2232 atactttgccatgaaagctatggataaaagtgtcatgcttaaccgaaacaaggtccatag 2291
|||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||
Sbjct: 175 atactttgccatgaaagcgatggataaaagtgtcatgcttaatcgcaataaggtccatag 234
Query: 2292 agctaccgctgaacgacaaatccttgatatgttggaccacccattccttccgacattgta 2351
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 235 agctactgctgaacgacaaatccttgatatgttggaccacccattccttccaacattgta 294
Query: 2352 tgcatcatttcagacaaagacacatatatgtcttattgttgactattgtgctggtgggga 2411
||||||||||||||||||||||||||||||||| ||| || || | |||| |||||
Sbjct: 295 tgcatcatttcagacaaagacacatatatgtctcattacagattactaccctggcgggga 354
Query: 2412 actctttatgctccttgataggcaacctatgaaggttctgaaggaggatgcggtcagg 2469
|||||| ||||||| |||||||||||| |||||||| || ||| ||||| ||||||
Sbjct: 355 gctctttctgctcctagataggcaacctctgaaggttttgcgggaagatgcagtcagg 412
>gb|BQ238335.1|BQ238335 TaE05005D10F TaE05 Triticum aestivum cDNA clone TaE05005D10F, mRNA
sequence
Length = 659
Score = 250 bits (126), Expect = 5e-064
Identities = 285/338 (84%)
Strand = Plus / Minus
Query: 2704 atgcgagcatcaaattcttttgttggtacagaggagtacattgcaccggagattattacc 2763
||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 659 atgcgagcatccaattcatttgttggtacagaggagtacatcgcacctgagattattacc 600
Query: 2764 ggagctggccatacgagtgctgtagattggtgggcgctaggaattcttctatatgagatg 2823
|||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| |||
Sbjct: 599 ggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatg 540
Query: 2824 ttatatggttatacacccttcagagggaaaacaagacaaaggacatttgctaatattctg 2883
| ||||| || |||||||||||||| ||||| || |||||||| ||||| || || ||
Sbjct: 539 ctgtatggctacacacccttcagaggtaaaaccaggcaaaggacctttgccaacatccta 480
Query: 2884 cacaaggatatcagatttcctgcgagcatacaggtgagcctggcggcaaggcagctgata 2943
|||||||| |||||||| || ||||| ||| ||||||||| | || |||||||||||
Sbjct: 479 cacaaggacatcagattccccgcgagtatatcggtgagcctcccagcgaggcagctgatc 420
Query: 2944 taccggttgctacaccgagaccctgcaaataggctaggttcctatgagggcgctatggag 3003
||| ||||||| ||| | || ||||| ||||| | || || |||||||| | | |||
Sbjct: 419 tacaggttgctgcacagggatcctgcgaatagaatgggatcgtatgagggatcgaatgag 360
Query: 3004 atcaaacaacaccccttctttcgtggcataaactgggc 3041
|| ||||||||||| ||||| || ||||| ||||||||
Sbjct: 359 ataaaacaacacccgttcttccgcggcatcaactgggc 322
>gb|BJ268735.1|BJ268735 BJ268735 Y. Ogihara unpublished cDNA library, Wh_oh Triticum aestivum
cDNA clone whoh18f22 5', mRNA sequence
Length = 105
Score = 143 bits (72), Expect = 9e-032
Identities = 95/103 (92%)
Strand = Plus / Plus
Query: 2683 cccatattttttgctgaaccaatgcgagcatcaaattcttttgttggtacagaggagtac 2742
|||||||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 3 cccatattttttgcagaacctatgcgagcatccaattcatttgttggtacagaggagtac 62
Query: 2743 attgcaccggagattattaccggagctggccatacgagtgctg 2785
|| ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 63 atngcacctgagattattactggagctggccatacaagtgctg 105
>gb|CA745936.1|CA745936 wri2s.pk003.d14 wri2s Triticum aestivum cDNA clone wri2s.pk003.d14 5'
end, mRNA sequence
Length = 554
Score = 133 bits (67), Expect = 9e-029
Identities = 202/247 (81%)
Strand = Plus / Plus
Query: 2798 cgctaggaattcttctatatgagatgttatatggttatacacccttcagagggaaaacaa 2857
||||||| |||||||| ||||| ||| | |||||||| |||||||||||||| ||||| |
Sbjct: 23 cgctagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaacca 82
Query: 2858 gacaaaggacatttgctaatattctgcacaaggatatcagatttcctgcgagcatacagg 2917
| ||||| || ||||| || || || |||||||| ||||||||||| |||||| || ||
Sbjct: 83 ggcaaagaacctttgccaacatcctacacaaggacatcagatttcccgcgagcgtatcgg 142
Query: 2918 tgagcctggcggcaaggcagctgatataccggttgctacaccgagaccctgcaaataggc 2977
||||||| | || ||||||||||| ||| ||||||| ||||| || ||||| |||||
Sbjct: 143 tgagcctcccagcgaggcagctgatctacaggttgctgcaccgggatcctgcgaatagaa 202
Query: 2978 taggttcctatgagggcgctatggagatcaaacaacaccccttctttcgtggcataaact 3037
| || || |||||||| | | ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 203 tgggatcgtatgagggatcgaacgagataaaacaacacccgttcttccgcggcatcaact 262
Query: 3038 gggctct 3044
|||||||
Sbjct: 263 gggctct 269
>gb|CA745566.1|CA745566 wri2s.pk001.n6 wri2s Triticum aestivum cDNA clone wri2s.pk001.n6 5'
end, mRNA sequence
Length = 465
Score = 63.9 bits (32), Expect = 7e-008
Identities = 127/159 (79%)
Strand = Plus / Minus
Query: 2884 cacaaggatatcagatttcctgcgagcatacaggtgagcctggcggcaaggcagctgata 2943
|||||||| ||||||||||| |||||| || ||||||||| | || |||||||||||
Sbjct: 434 cacaaggacatcagatttcccgcgagcgtatcggtgagcctcccagcgaggcagctgatt 375
Query: 2944 taccggttgctacaccgagaccctgcaaataggctaggttcctatgagggcgctatggag 3003
||| ||||||| |||| || ||||| ||||| | || || |||||||| | | |||
Sbjct: 374 tacaggttgctgnaccgggatcctgcgaatagaatgggatcgtatgagggatcgaacgag 315
Query: 3004 atcaaacaacaccccttctttcgtggcataaactgggct 3042
|| ||||||||||| || || || ||||| |||||||||
Sbjct: 314 ataaaacaacacccgtttttccgcggcatcaactgggct 276
>gb|BE411972.1|BE411972 JJL001.B09R990511 ITEC JJL Wheat Leaf Library Triticum aestivum cDNA
clone JJL001.B09, mRNA sequence
Length = 808
Score = 61.9 bits (31), Expect = 3e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1831 aagagcggtaagaaattctggaacctctttcacttgcagcctatgcgtgatcagaaggg 1889
|||||||| ||||| ||||||||| | |||||| ||||||||||| | |||||||||||
Sbjct: 168 aagagcgggaagaagttctggaacttgtttcacctgcagcctatgtgggatcagaaggg 226
>gb|CA616725.1|CA616725 wl1n.pk0005.g6 wl1n Triticum aestivum cDNA clone wl1n.pk0005.g6 5'
end, mRNA sequence
Length = 536
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 301 ggaggagaaggaggagcagcagcagcag 328
||||| ||||||||||||||||||||||
Sbjct: 8 ggaggcgaaggaggagcagcagcagcag 35
>gb|CA618657.1|CA618657 wl1n.pk0036.f9 wl1n Triticum aestivum cDNA clone wl1n.pk0036.f9 5'
end, mRNA sequence
Length = 609
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 301 ggaggagaaggaggagcagcagcagcag 328
||||| ||||||||||||||||||||||
Sbjct: 8 ggaggcgaaggaggagcagcagcagcag 35
>gb|CA624340.1|CA624340 wl1n.pk0116.h4 wl1n Triticum aestivum cDNA clone wl1n.pk0116.h4 5'
end, mRNA sequence
Length = 658
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 301 ggaggagaaggaggagcagcagcagcag 328
||||| ||||||||||||||||||||||
Sbjct: 8 ggaggcgaaggaggagcagcagcagcag 35
>gb|CA625458.1|CA625458 wl1n.pk0139.c1 wl1n Triticum aestivum cDNA clone wl1n.pk0139.c1 5'
end, mRNA sequence
Length = 551
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 301 ggaggagaaggaggagcagcagcagcag 328
||||| ||||||||||||||||||||||
Sbjct: 8 ggaggcgaaggaggagcagcagcagcag 35
>gb|CA627325.1|CA627325 wl1n.pk150.d11 wl1n Triticum aestivum cDNA clone wl1n.pk150.d11 5'
end, mRNA sequence
Length = 477
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 301 ggaggagaaggaggagcagcagcagcag 328
||||| ||||||||||||||||||||||
Sbjct: 8 ggaggcgaaggaggagcagcagcagcag 35
>gb|DR738890.1|DR738890 FGAS084107 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1104
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 302 gaggagaaggaggagcagcagcagcagc 329
|||||| |||||||||||||||||||||
Sbjct: 170 gaggaggaggaggagcagcagcagcagc 143
Score = 44.1 bits (22), Expect = 0.062
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 299 gaggaggagaaggaggagcagcagcagcag 328
||||||||| ||||| ||||||||||||||
Sbjct: 170 gaggaggaggaggagcagcagcagcagcag 141
>gb|CA671064.1|CA671064 wlsu2.pk0004.d10 wlsu2 Triticum aestivum cDNA clone wlsu2.pk0004.d10
5' end, mRNA sequence
Length = 216
Score = 44.1 bits (22), Expect = 0.062
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 2650 aagaagaaaaagaggaggaaga 2671
||||||||||||||||||||||
Sbjct: 60 aagaagaaaaagaggaggaaga 39
>gb|CA674412.1|CA674412 wlsu2.pk023.j12 wlsu2 Triticum aestivum cDNA clone wlsu2.pk023.j12 5'
end, mRNA sequence
Length = 347
Score = 44.1 bits (22), Expect = 0.062
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 2650 aagaagaaaaagaggaggaaga 2671
||||||||||||||||||||||
Sbjct: 82 aagaagaaaaagaggaggaaga 61
>gb|CA745528.1|CA745528 wri2s.pk001.l14 wri2s Triticum aestivum cDNA clone wri2s.pk001.l14 5'
end, mRNA sequence
Length = 402
Score = 44.1 bits (22), Expect = 0.062
Identities = 88/110 (80%)
Strand = Plus / Minus
Query: 2932 aggcagctgatataccggttgctacaccgagaccctgcaaataggctaggttcctatgag 2991
||||||||||| ||| ||||||| ||| | || ||||| ||||| | || || ||||||
Sbjct: 352 aggcagctgatctacaggttgctgcacagggatcctgcgaatagaatgggatcgtatgag 293
Query: 2992 ggcgctatggagatcaaacaacaccccttctttcgtggcataaactgggc 3041
|| | | ||||| ||||||||||| ||||| || ||||| ||||||||
Sbjct: 292 ggatcgaatgagataaaacaacacccgttcttccgcggcatcaactgggc 243
>gb|CA746610.1|CA746610 wri2s.pk004.o16 wri2s Triticum aestivum cDNA clone wri2s.pk004.o16 5'
end, mRNA sequence
Length = 404
Score = 44.1 bits (22), Expect = 0.062
Identities = 88/110 (80%)
Strand = Plus / Minus
Query: 2932 aggcagctgatataccggttgctacaccgagaccctgcaaataggctaggttcctatgag 2991
||||||||||| ||| ||||||| ||| | || ||||| ||||| | || || ||||||
Sbjct: 352 aggcagctgatctacaggttgctgcacagggatcctgcgaatagaatgggatcgtatgag 293
Query: 2992 ggcgctatggagatcaaacaacaccccttctttcgtggcataaactgggc 3041
|| | | ||||| ||||||||||| ||||| || ||||| ||||||||
Sbjct: 292 ggatcgaatgagataaaacaacacccgttcttccgcggcatcaactgggc 243
>gb|CA746861.1|CA746861 wri2s.pk004.p20 wri2s Triticum aestivum cDNA clone wri2s.pk004.p20 5'
end, mRNA sequence
Length = 403
Score = 44.1 bits (22), Expect = 0.062
Identities = 88/110 (80%)
Strand = Plus / Minus
Query: 2932 aggcagctgatataccggttgctacaccgagaccctgcaaataggctaggttcctatgag 2991
||||||||||| ||| ||||||| ||| | || ||||| ||||| | || || ||||||
Sbjct: 352 aggcagctgatctacaggttgctgcacagggatcctgcgaatagaatgggatcgtatgag 293
Query: 2992 ggcgctatggagatcaaacaacaccccttctttcgtggcataaactgggc 3041
|| | | ||||| ||||||||||| ||||| || ||||| ||||||||
Sbjct: 292 ggatcgaatgagataaaacaacacccgttcttccgcggcatcaactgggc 243
>gb|CN009977.1|CN009977 WHE3865_A08_B15ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3865_A08_B15,
mRNA sequence
Length = 610
Score = 44.1 bits (22), Expect = 0.062
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 297 aggaggaggagaaggaggagcagcagcagc 326
||||||||||||||||||||| | ||||||
Sbjct: 368 aggaggaggagaaggaggagccggagcagc 339
>gb|CV778478.1|CV778478 FGAS072886 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 44.1 bits (22), Expect = 0.062
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 311 gaggagcagcagcagcagccag 332
||||||||||||||||||||||
Sbjct: 186 gaggagcagcagcagcagccag 165
>gb|BE470909.1|BE470909 WHE0280_C08_E16ZS Wheat drought-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0280_C08_E16, mRNA
sequence
Length = 558
Score = 42.1 bits (21), Expect = 0.25
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 309 aggaggagcagcagcagcagc 329
|||||||||||||||||||||
Sbjct: 167 aggaggagcagcagcagcagc 147
>gb|BE515844.1|BE515844 WHE0606_E09_I18ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0606_E09_I18, mRNA sequence
Length = 497
Score = 42.1 bits (21), Expect = 0.25
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 1831 aagagcggtaagaaattctggaacctctttcacttgcagcctatg 1875
|||||||| ||||| ||||||||| | ||| || |||||||||||
Sbjct: 65 aagagcgggaagaagttctggaacttgttttacctgcagcctatg 21
>gb|CA617844.1|CA617844 wl1n.pk0025.h12 wl1n Triticum aestivum cDNA clone wl1n.pk0025.h12
5' end, mRNA sequence
Length = 532
Score = 42.1 bits (21), Expect = 0.25
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 301 ggaggagaaggaggagcagcagcag 325
|||| ||||||||||||||||||||
Sbjct: 124 ggagtagaaggaggagcagcagcag 100
>gb|CK159369.1|CK159369 FGAS040809 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 886
Score = 42.1 bits (21), Expect = 0.25
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 302 gaggagaaggaggagcagcag 322
|||||||||||||||||||||
Sbjct: 604 gaggagaaggaggagcagcag 624
Score = 42.1 bits (21), Expect = 0.25
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 302 gaggagaaggaggagcagcag 322
|||||||||||||||||||||
Sbjct: 159 gaggagaaggaggagcagcag 179
>gb|CK159452.1|CK159452 FGAS040903 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 887
Score = 42.1 bits (21), Expect = 0.25
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 302 gaggagaaggaggagcagcag 322
|||||||||||||||||||||
Sbjct: 632 gaggagaaggaggagcagcag 612
Score = 42.1 bits (21), Expect = 0.25
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 302 gaggagaaggaggagcagcag 322
|||||||||||||||||||||
Sbjct: 187 gaggagaaggaggagcagcag 167
>gb|CV763809.1|CV763809 FGAS058192 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 42.1 bits (21), Expect = 0.25
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 309 aggaggagcagcagcagcagc 329
|||||||||||||||||||||
Sbjct: 162 aggaggagcagcagcagcagc 142
>gb|CV763974.1|CV763974 FGAS058357 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 846
Score = 42.1 bits (21), Expect = 0.25
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 309 aggaggagcagcagcagcagc 329
|||||||||||||||||||||
Sbjct: 160 aggaggagcagcagcagcagc 140
>gb|DR732468.1|DR732468 FGAS078388 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 924
Score = 42.1 bits (21), Expect = 0.25
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 302 gaggagaaggaggagcagcag 322
|||||||||||||||||||||
Sbjct: 186 gaggagaaggaggagcagcag 166
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 910,392
Number of Sequences: 636343
Number of extensions: 910392
Number of successful extensions: 316230
Number of sequences better than 0.5: 33
Number of HSP's better than 0.5 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 316113
Number of HSP's gapped (non-prelim): 92
length of query: 3330
length of database: 367,240,239
effective HSP length: 20
effective length of query: 3310
effective length of database: 354,513,379
effective search space: 1173439284490
effective search space used: 1173439284490
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)