BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3562100.2.1
(759 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF133714.1|CF133714 WHE4362_D10_H20ZT Wheat meiotic flor... 301 4e-080
gb|BJ276695.1|BJ276695 BJ276695 Y. Ogihara unpublished cDNA... 198 4e-049
gb|CV779982.1|CV779982 FGAS074391 Triticum aestivum FGAS: L... 196 2e-048
gb|BJ266775.1|BJ266775 BJ266775 Y. Ogihara unpublished cDNA... 172 2e-041
gb|BJ258298.1|BJ258298 BJ258298 Y. Ogihara unpublished cDNA... 170 9e-041
gb|CV764611.1|CV764611 FGAS058996 Triticum aestivum FGAS: L... 163 2e-038
gb|BQ294965.1|BQ294965 WHE2856_F10_K20ZS Wheat unstressed r... 147 1e-033
gb|CD868499.1|CD868499 AZO2.109B04F001114 AZO2 Triticum aes... 147 1e-033
gb|CD868500.1|CD868500 AZO2.109B04R010328 AZO2 Triticum aes... 147 1e-033
gb|CD907174.1|CD907174 G468.106C13F010810 G468 Triticum aes... 147 1e-033
gb|CN011621.1|CN011621 WHE3886_D10_H20ZS Wheat Fusarium gra... 147 1e-033
gb|BJ307537.1|BJ307537 BJ307537 Y. Ogihara unpublished cDNA... 143 2e-032
gb|CA610303.1|CA610303 wr1.pk0117.g11 wr1 Triticum aestivum... 141 8e-032
gb|CV759008.1|CV759008 FGAS053390 Triticum aestivum FGAS: L... 141 8e-032
gb|CK202735.1|CK202735 FGAS011260 Triticum aestivum FGAS: L... 135 5e-030
gb|BJ268135.1|BJ268135 BJ268135 Y. Ogihara unpublished cDNA... 121 7e-026
gb|BJ273057.1|BJ273057 BJ273057 Y. Ogihara unpublished cDNA... 121 7e-026
gb|CK203050.1|CK203050 FGAS011576 Triticum aestivum FGAS: L... 121 7e-026
gb|BQ170384.1|BQ170384 WHE1769_F09_L17ZT Wheat pre-anthesis... 66 4e-009
gb|CV768604.1|CV768604 FGAS062995 Triticum aestivum FGAS: L... 60 2e-007
gb|BM135157.1|BM135157 WHE0454_F04_F04ZS Wheat Fusarium gra... 54 1e-005
gb|BG904446.1|BG904446 TaLr1132C06F TaLr1 Triticum aestivum... 52 6e-005
gb|CD905162.1|CD905162 G468.100L17F010614 G468 Triticum aes... 50 2e-004
gb|BJ301730.1|BJ301730 BJ301730 Y. Ogihara unpublished cDNA... 48 9e-004
gb|BJ214052.1|BJ214052 BJ214052 Y. Ogihara unpublished cDNA... 46 0.004
gb|BJ221532.1|BJ221532 BJ221532 Y. Ogihara unpublished cDNA... 46 0.004
gb|CA719172.1|CA719172 wkm2n.pk003.b11 wkm2n Triticum aesti... 46 0.004
gb|CA743035.1|CA743035 wri1s.pk002.e9 wri1s Triticum aestiv... 46 0.004
gb|CD900181.1|CD900181 G174.114L13F010824 G174 Triticum aes... 46 0.004
gb|CV774620.1|CV774620 FGAS069019 Triticum aestivum FGAS: L... 46 0.004
>gb|CF133714.1|CF133714 WHE4362_D10_H20ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4362_D10_H20, mRNA sequence
Length = 761
Score = 301 bits (152), Expect = 4e-080
Identities = 227/252 (90%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||
Sbjct: 299 agcatttaaagaagtggcaataattagccatccccgtgctggtgaatacgcatttgggtt 358
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||| | |||| |||||||||| |||||||||||||||||| |||||||||| ||
Sbjct: 359 cataacatcgagcatgattcttcagactgacaaaggtgatgaagaactgtgtagtgtcta 418
Query: 167 tgtgccaaccaatcatttatatattggtgacatctttttggtaaactccgccgaaattat 226
|||||||||||||||| ||||||||||||| ||||||||||| ||||| || ||||||||
Sbjct: 419 tgtgccaaccaatcatctatatattggtgatatctttttggtgaactctgcggaaattat 478
Query: 227 aaggcccaatttgtctattcgtgaaggcatagaaataattgtttcaggaggaatgactat 286
|||||||||| |||| ||||| ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 479 aaggcccaatctgtccattcgagaagggatagaaataattgtctctggaggaatgaccat 538
Query: 287 gccgcaggtgat 298
||||||||||||
Sbjct: 539 gccgcaggtgat 550
>gb|BJ276695.1|BJ276695 BJ276695 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh1p20 3', mRNA sequence
Length = 586
Score = 198 bits (100), Expect = 4e-049
Identities = 149/164 (90%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 138 aaaggtgatgaagaattgtgtagtgtttatgtgccaaccaatcatttatatattggtgac 197
||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 543 aaaggtgatgaagaactgtgtagtgtctatgtgccaaccaatcatctatatattggtgat 484
Query: 198 atctttttggt-aaactccgccgaaattataaggcccaatttgtctattcgtgaaggcat 256
||||||||||| || ||| || |||||||||||||||||| |||| ||||| ||||| ||
Sbjct: 483 atctttttggtgaacctctgcggaaattataaggcccaatctgtccattcgagaagggat 424
Query: 257 agaaataattgtttcaggaggaatgactatgccgcaggtgatca 300
||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 423 agaaataattgtttctggaggaatgaccatgccacaggtgatca 380
>gb|CV779982.1|CV779982 FGAS074391 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 841
Score = 196 bits (99), Expect = 2e-048
Identities = 144/159 (90%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||||| |||||||||| ||||||||| |||||||||||
Sbjct: 642 agcatttaaagaagtggcaataattagccatccccgtgctggtgaatacgcatttggatt 701
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||| | |||| |||||||||| |||||||||||||||||| |||||||||| ||
Sbjct: 702 cataacatcgagcatgattcttcagactgacaaaggtgatgaagaactgtgtagtgtcta 761
Query: 167 tgtgccaaccaatcatttatatattggtgacatcttttt 205
|||| ||||||||||| ||||||||||||| ||||||||
Sbjct: 762 tgtggcaaccaatcatctatatattggtgaaatcttttt 800
>gb|BJ266775.1|BJ266775 BJ266775 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6o11 3', mRNA sequence
Length = 734
Score = 172 bits (87), Expect = 2e-041
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| |||||||||||||| ||||| |||||
Sbjct: 667 agcatttaaagaagttgcaataattcggcatccacgtgttggtgaatacgcattcggatt 608
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 607 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaattgtgtagtgttta 548
Query: 167 tgtgccaaccaatcatttatatattggtgacatctttttggtaaactccgccgaaattat 226
||||||||| |||||| ||||||||||||| || ||| || | ||||| | || || ||
Sbjct: 547 tgtgccaacaaatcatctatatattggtgatatatttctgctgaactctgaagagatcat 488
Query: 227 aaggcccaatttgtctattcgtgaaggcatagaaataattgtttcaggaggaatgactat 286
|| || || || || ||||| ||||| || ||||| || ||||| ||||||||||| ||
Sbjct: 487 cagaccaaacttatccattcgagaaggaattgaaattatcgtttctggaggaatgaccat 428
Query: 287 gcc 289
|||
Sbjct: 427 gcc 425
>gb|BJ258298.1|BJ258298 BJ258298 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6o11 5', mRNA sequence
Length = 648
Score = 170 bits (86), Expect = 9e-041
Identities = 134/150 (89%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| |||||||||||||| ||||| |||||
Sbjct: 462 agcatttaaagaagttgcaataattcggcatccacgtgttggtgaatacgcattcggatt 521
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 522 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaattgtgtagtgttta 581
Query: 167 tgtgccaaccaatcatttatatattggtga 196
||||||||| |||||| |||||||||||||
Sbjct: 582 tgtgccaacaaatcatctatatattggtga 611
>gb|CV764611.1|CV764611 FGAS058996 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 163 bits (82), Expect = 2e-038
Identities = 138/157 (87%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| |||||||||||||||||||| |||||
Sbjct: 639 agcatttaaagaagttgcaattattcggcatccacgtgttggtgaatatgcattcggatt 698
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| ||| ||||||| |||||
Sbjct: 699 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaactgtgtagcgttta 758
Query: 167 tgtgccaaccaatcatttatatattggtgacatcttt 203
||||| || |||||| ||||||||||||||||||||
Sbjct: 759 cgtgccnacaaatcatctatatattggtgacatcttt 795
>gb|BQ294965.1|BQ294965 WHE2856_F10_K20ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2856_F10_K20, mRNA sequence
Length = 691
Score = 147 bits (74), Expect = 1e-033
Identities = 131/150 (87%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| ||||| |||||||| || || |||||
Sbjct: 495 agcatttaaagaagttgcaataattcggcatccacgtgtcggtgaatacgccttcggatt 554
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 555 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaattgtgtagtgttta 614
Query: 167 tgtgccaaccaatcatttatatattggtga 196
|||||| || |||||| |||||||||||||
Sbjct: 615 tgtgccgacaaatcatctatatattggtga 644
>gb|CD868499.1|CD868499 AZO2.109B04F001114 AZO2 Triticum aestivum cDNA clone AZO2109B04,
mRNA sequence
Length = 570
Score = 147 bits (74), Expect = 1e-033
Identities = 131/150 (87%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| ||||| |||||||| || || |||||
Sbjct: 145 agcatttaaagaagttgcaataattcggcatccacgtgtcggtgaatacgccttcggatt 204
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaattgtgtagtgttta 264
Query: 167 tgtgccaaccaatcatttatatattggtga 196
|||||| || |||||| |||||||||||||
Sbjct: 265 tgtgccgacaaatcatctatatattggtga 294
>gb|CD868500.1|CD868500 AZO2.109B04R010328 AZO2 Triticum aestivum cDNA clone AZO2109B04,
mRNA sequence
Length = 708
Score = 147 bits (74), Expect = 1e-033
Identities = 131/150 (87%)
Strand = Plus / Minus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| ||||| |||||||| || || |||||
Sbjct: 669 agcatttaaagaagttgcaataattcggcatccacgtgtcggtgaatacgccttcggatt 610
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 609 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaattgtgtagtgttta 550
Query: 167 tgtgccaaccaatcatttatatattggtga 196
|||||| || |||||| |||||||||||||
Sbjct: 549 tgtgccgacaaatcatctatatattggtga 520
>gb|CD907174.1|CD907174 G468.106C13F010810 G468 Triticum aestivum cDNA clone G468106C13,
mRNA sequence
Length = 628
Score = 147 bits (74), Expect = 1e-033
Identities = 131/150 (87%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| ||||| |||||||| || || |||||
Sbjct: 84 agcatttaaagaagttgcaataattcggcatccacgtgtcggtgaatacgccttcggatt 143
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 144 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaattgtgtagtgttta 203
Query: 167 tgtgccaaccaatcatttatatattggtga 196
|||||| || |||||| |||||||||||||
Sbjct: 204 tgtgccgacaaatcatctatatattggtga 233
>gb|CN011621.1|CN011621 WHE3886_D10_H20ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3886_D10_H20,
mRNA sequence
Length = 632
Score = 147 bits (74), Expect = 1e-033
Identities = 131/150 (87%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| ||||| |||||||| || || |||||
Sbjct: 230 agcatttaaagaagttgcaataattcggcatccacgtgtcggtgaatacgccttcggatt 289
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 290 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaattgtgtagtgttta 349
Query: 167 tgtgccaaccaatcatttatatattggtga 196
|||||| || |||||| |||||||||||||
Sbjct: 350 tgtgccgacaaatcatctatatattggtga 379
>gb|BJ307537.1|BJ307537 BJ307537 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11n24 3', mRNA sequence
Length = 708
Score = 143 bits (72), Expect = 2e-032
Identities = 181/216 (83%), Gaps = 1/216 (0%)
Strand = Plus / Minus
Query: 75 catccccgtgttgg-tgaatatgcatttggattcataacatcaaccatggttcttcagac 133
||||| |||||||| |||||| ||||| ||||| ||||||||||| | || ||||||||
Sbjct: 704 catccacgtgttgggtgaatacgcattcggatttataacatcaactgttgtccttcagac 645
Query: 134 agacaaaggtgatgaagaattgtgtagtgtttatgtgccaaccaatcatttatatattgg 193
||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 644 agacaaaggtgatgaggaattgtgtagtgtttatgtgccaacaaatcatctatatattgg 585
Query: 194 tgacatctttttggtaaactccgccgaaattataaggcccaatttgtctattcgtgaagg 253
||| || ||| || | ||||| | || || || || || || || || ||||| |||||
Sbjct: 584 tgatatatttctgctgaactctgaagagatcatcagaccaaacttatccattcgagaagg 525
Query: 254 catagaaataattgtttcaggaggaatgactatgcc 289
|| ||||| || ||||| ||||||||||| |||||
Sbjct: 524 aattgaaattatcgtttctggaggaatgaccatgcc 489
>gb|CA610303.1|CA610303 wr1.pk0117.g11 wr1 Triticum aestivum cDNA clone wr1.pk0117.g11 5'
end, mRNA sequence
Length = 662
Score = 141 bits (71), Expect = 8e-032
Identities = 129/147 (87%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| |||||||||||||||||||| |||||
Sbjct: 79 agcatttaaagaagttgcaattattcggcatccacgtgttggtgaatatgcattcggatt 138
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || ||||||||||||||||||||||| ||| ||||||| |||||
Sbjct: 139 tataacatcaactgttgtccttcagacagacaaaggtgatgaggaactgtgtagcgttta 198
Query: 167 tgtgccaaccaatcatttatatattgg 193
||||||| ||||||| ||||||||||
Sbjct: 199 cgtgccaa-caatcatctatatattgg 224
>gb|CV759008.1|CV759008 FGAS053390 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 141 bits (71), Expect = 8e-032
Identities = 128/147 (87%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| ||||| ||| | ||||| |||||||| ||||| ||||| |||||
Sbjct: 627 agcatttaaagaagttgcaataattcggcatccacgtgttggggaatacgcattcggatt 686
Query: 107 cataacatcaaccatggttcttcagacagacaaaggtgatgaagaattgtgtagtgttta 166
||||||||||| | || |||| |||||| |||||||||||||||||||||||||||||
Sbjct: 687 tataacatcaactgttgtccttccgacagaaaaaggtgatgaagaattgtgtagtgttta 746
Query: 167 tgtgccaaccaatcatttatatattgg 193
|||||| || |||||| ||||||||||
Sbjct: 747 tgtgcccacaaatcatctatatattgg 773
>gb|CK202735.1|CK202735 FGAS011260 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 135 bits (68), Expect = 5e-030
Identities = 101/112 (90%)
Strand = Plus / Plus
Query: 187 atattggtgacatctttttggtaaactccgccgaaattataaggcccaatttgtctattc 246
|||||||||| ||||||||||| ||||| || |||||||||||||||||| |||| ||||
Sbjct: 112 atattggtgatatctttttggtgaactctgcggaaattataaggcccaatctgtccattc 171
Query: 247 gtgaaggcatagaaataattgtttcaggaggaatgactatgccgcaggtgat 298
| ||||| |||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 172 gagaagggatagaaataattgtctctggaggaatgaccatgccgcaggtgat 223
>gb|BJ268135.1|BJ268135 BJ268135 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15f12 5', mRNA sequence
Length = 630
Score = 121 bits (61), Expect = 7e-026
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 130 agacagacaaaggtgatgaagaattgtgtagtgtttatgtgccaaccaatcatttatata 189
|||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 537 agactgacaaaggtgatgaagaattgtgtagtgtctatgtgccaaccaatcatctatata 596
Query: 190 ttggtgacatctttttggtaaactc 214
||||||| | ||||||||| |||||
Sbjct: 597 ttggtgatacctttttggtgaactc 621
>gb|BJ273057.1|BJ273057 BJ273057 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15f12 3', mRNA sequence
Length = 522
Score = 121 bits (61), Expect = 7e-026
Identities = 93/103 (90%), Gaps = 3/103 (2%)
Strand = Plus / Minus
Query: 130 agacagacaaaggtgatgaagaattgtgtagtgtttatgtgccaaccaatcatttatata 189
|||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 124 agactgacaaaggtgatgaagaattgtgtagtgtctatgtgccaaccaatcatctatata 65
Query: 190 ttggtgacatctttttggtaaactccgccgaaattataaggcc 232
||||||| | ||||||||| ||||| | |||||||||||||
Sbjct: 64 ttggtgatacctttttggtgaactctg---aaattataaggcc 25
>gb|CK203050.1|CK203050 FGAS011576 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 121 bits (61), Expect = 7e-026
Identities = 101/113 (89%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 187 atattggtgacatctttttggtaaactccgccgaaattataaggcccaatttgtctattc 246
|||||||||| ||||||||||| ||||| || |||||||||||||||||| |||| ||||
Sbjct: 113 atattggtgatatctttttggtgaactctgcggaaattataaggcccaatctgtccattc 172
Query: 247 gtgaaggcatagaaataattgtttcag-gaggaatgactatgccgcaggtgat 298
| ||||| |||||||||||||| || | |||||||||| ||||||||||||||
Sbjct: 173 gagaagggatagaaataattgtctctgngaggaatgaccatgccgcaggtgat 225
>gb|BQ170384.1|BQ170384 WHE1769_F09_L17ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1769_F09_L17, mRNA sequence
Length = 484
Score = 65.9 bits (33), Expect = 4e-009
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 258 gaaataattgtttcaggaggaatgactatgccgcaggtgat 298
|||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 451 gaaataattgtttctggaggaatgaccatgccgcaggtgat 411
>gb|CV768604.1|CV768604 FGAS062995 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 257 agaaataattgtttcaggaggaatgactatgccgcaggtgat 298
||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 493 agaaataattgtttctggaggaatgaccatgccacaggtgat 534
>gb|BM135157.1|BM135157 WHE0454_F04_F04ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0454_F04_F04,
mRNA sequence
Length = 460
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 75 catccccgtgttggtgaatatgcatttggattcat 109
||||||||| |||| ||||||||||||||||||||
Sbjct: 332 catccccgtattggggaatatgcatttggattcat 366
>gb|BG904446.1|BG904446 TaLr1132C06F TaLr1 Triticum aestivum cDNA clone TaLr1132C06 3',
mRNA sequence
Length = 600
Score = 52.0 bits (26), Expect = 6e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 257 agaaataattgtttcaggaggaatgactatgccgcaggtgat 298
|||||||| |||||| ||||||||||| |||| |||||||||
Sbjct: 405 agaaataactgtttctggaggaatgaccatgctgcaggtgat 364
>gb|CD905162.1|CD905162 G468.100L17F010614 G468 Triticum aestivum cDNA clone G468100L17,
mRNA sequence
Length = 517
Score = 50.1 bits (25), Expect = 2e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 243 attcgtgaaggcatagaaataattgtttcaggaggaatgactatgccgcaggt 295
||||| ||||| || ||||| || ||||||||||||||||| ||||| |||||
Sbjct: 66 attcgagaaggaattgaaattatcgtttcaggaggaatgaccatgccacaggt 118
>gb|BJ301730.1|BJ301730 BJ301730 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11n24 5', mRNA sequence
Length = 621
Score = 48.1 bits (24), Expect = 9e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaata 94
|||||| |||||||| ||||| ||| | ||||| ||||||||||||||
Sbjct: 573 agcatttaaagaagttgcaataattcggcatccacgtgttggtgaata 620
>gb|BJ214052.1|BJ214052 BJ214052 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25j18 5', mRNA sequence
Length = 693
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 catccccgtgttggtgaatatgcatttggattcat 109
||||| ||| |||| ||||||||||||||||||||
Sbjct: 346 catcctcgtattggggaatatgcatttggattcat 380
>gb|BJ221532.1|BJ221532 BJ221532 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25j18 3', mRNA sequence
Length = 603
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 75 catccccgtgttggtgaatatgcatttggattcat 109
||||| ||| |||| ||||||||||||||||||||
Sbjct: 482 catcctcgtattggggaatatgcatttggattcat 448
>gb|CA719172.1|CA719172 wkm2n.pk003.b11 wkm2n Triticum aestivum cDNA clone wkm2n.pk003.b11
5' end, mRNA sequence
Length = 593
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 catccccgtgttggtgaatatgcatttggattcat 109
||||| ||| |||| ||||||||||||||||||||
Sbjct: 124 catcctcgtattggggaatatgcatttggattcat 158
>gb|CA743035.1|CA743035 wri1s.pk002.e9 wri1s Triticum aestivum cDNA clone wri1s.pk002.e9 5'
end, mRNA sequence
Length = 631
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 catccccgtgttggtgaatatgcatttggattcat 109
||||| ||| |||| ||||||||||||||||||||
Sbjct: 159 catcctcgtattggggaatatgcatttggattcat 193
>gb|CD900181.1|CD900181 G174.114L13F010824 G174 Triticum aestivum cDNA clone G174114L13,
mRNA sequence
Length = 703
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 catccccgtgttggtgaatatgcatttggattcat 109
||||| ||| |||| ||||||||||||||||||||
Sbjct: 153 catcctcgtattggggaatatgcatttggattcat 187
>gb|CV774620.1|CV774620 FGAS069019 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 846
Score = 46.1 bits (23), Expect = 0.004
Identities = 84/103 (81%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 47 agcattcaaagaagtagcaatcattagtcatccccgtgttggtgaatatgcatttggatt 106
|||||| |||||||| | ||| ||| | ||||| |||||||||||| |||||| |||||
Sbjct: 640 agcatttaaagaagttggaattattcggcatccacgtgttggtgaaaatgcatccggatt 699
Query: 107 ca-taacatcaaccatggttcttcagacagacaaaggtgatga 148
| |||||||| | || |||||||||||||| ||||||||
Sbjct: 700 tattaacatcacttgttgtccttcagacagacaagggtgatga 742
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 102,341
Number of Sequences: 636343
Number of extensions: 102341
Number of successful extensions: 27116
Number of sequences better than 0.5: 30
Number of HSP's better than 0.5 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27056
Number of HSP's gapped (non-prelim): 58
length of query: 759
length of database: 367,240,239
effective HSP length: 19
effective length of query: 740
effective length of database: 355,149,722
effective search space: 262810794280
effective search space used: 262810794280
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)