BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3276201.2.1
(1827 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE499364.1|BE499364 WHE0973_C08_F15ZS Wheat pre-anthesis... 402 e-110
emb|AJ577382.1|TAE577382 Triticum aestivum partial mRNA for... 402 e-110
gb|CD454110.1|CD454110 WHE0973_C08_F15ZT CS wheat pre-anthe... 260 3e-067
dbj|AB158408.1| Triticum aestivum mRNA for putative 1,4-bet... 188 9e-046
gb|BE497963.1|BE497963 WHE0958_C06_F12ZS Wheat pre-anthesis... 170 2e-040
gb|CN010320.1|CN010320 WHE3869_C03_F05ZS Wheat Fusarium gra... 163 5e-038
gb|CA741209.1|CA741209 wia1c.pk001.i20 wia1c Triticum aesti... 147 3e-033
gb|CA741856.1|CA741856 wia1c.pk002.i1 wia1c Triticum aestiv... 125 1e-026
gb|CA596996.1|CA596996 wpa1c.pk014.b7 wpa1c Triticum aestiv... 115 1e-023
gb|BE498047.1|BE498047 WHE0951_B03_C05ZS Wheat pre-anthesis... 113 4e-023
emb|AJ577381.1|TAE577381 Triticum aestivum partial mRNA for... 113 4e-023
gb|BJ209203.1|BJ209203 BJ209203 Y. Ogihara unpublished cDNA... 52 1e-004
gb|CD893893.1|CD893893 G118.124M24F010828 G118 Triticum aes... 46 0.009
gb|CD893894.1|CD893894 G118.124M24R011116 G118 Triticum aes... 46 0.009
gb|AJ609810.1|AJ609810 AJ609810 Triticum turgidum subsp. du... 44 0.034
gb|BE443538.1|BE443538 WHE1115_B01_D01ZS Wheat etiolated se... 42 0.13
gb|BE445087.1|BE445087 WHE1131_A11_B21ZS Wheat etiolated se... 42 0.13
gb|BE499038.1|BE499038 WHE0969_A02_B03ZS Wheat pre-anthesis... 42 0.13
gb|BE500398.1|BE500398 WHE0982_B12_D24ZS Wheat pre-anthesis... 42 0.13
gb|BF474645.1|BF474645 WHE2108_D07_H14ZS Wheat salt-stresse... 42 0.13
gb|BF483767.1|BF483767 WHE2308_E07_J14ZS Wheat pre-anthesis... 42 0.13
gb|BQ752856.1|BQ752856 WHE4119_H09_P17ZS Wheat salt-stresse... 42 0.13
gb|BU100678.1|BU100678 WHE3356_C10_E20ZS Chinese Spring alu... 42 0.13
gb|BU101019.1|BU101019 WHE3360_G08_M16ZS Chinese Spring alu... 42 0.13
gb|BU101110.1|BU101110 WHE3361_G08_N15ZS Chinese Spring alu... 42 0.13
gb|BJ207596.1|BJ207596 BJ207596 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ210270.1|BJ210270 BJ210270 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ210295.1|BJ210295 BJ210295 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ211251.1|BJ211251 BJ211251 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ214882.1|BJ214882 BJ214882 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ259085.1|BJ259085 BJ259085 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ259297.1|BJ259297 BJ259297 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ279938.1|BJ279938 BJ279938 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ289889.1|BJ289889 BJ289889 Y. Ogihara unpublished cDNA... 42 0.13
gb|BJ300478.1|BJ300478 BJ300478 Y. Ogihara unpublished cDNA... 42 0.13
gb|CD895569.1|CD895569 G174.100D08F010705 G174 Triticum aes... 42 0.13
gb|CD924152.1|CD924152 G750.111L24F010705 G750 Triticum aes... 42 0.13
gb|CD930782.1|CD930782 GR45.112F19F010418 GR45 Triticum aes... 42 0.13
gb|CD931143.1|CD931143 GR45.113J21F010419 GR45 Triticum aes... 42 0.13
gb|CD931144.1|CD931144 GR45.113J21F010511 GR45 Triticum aes... 42 0.13
gb|CD935713.1|CD935713 OV.102E08F010202 OV Triticum aestivu... 42 0.13
gb|CK196588.1|CK196588 FGAS005047 Triticum aestivum FGAS: L... 42 0.13
gb|CV762492.1|CV762492 FGAS056881 Triticum aestivum FGAS: L... 42 0.13
gb|CV782371.1|CV782371 FGAS076784 Triticum aestivum FGAS: L... 42 0.13
gb|DR741422.1|DR741422 FGAS030477 Triticum aestivum FGAS: L... 42 0.13
>gb|BE499364.1|BE499364 WHE0973_C08_F15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0973_C08_F15, mRNA sequence
Length = 506
Score = 402 bits (203), Expect = e-110
Identities = 418/487 (85%), Gaps = 2/487 (0%)
Strand = Plus / Plus
Query: 871 ctaccagcaggtggggcagctggaccgcaatgccatcctattcatgaacgaattcaacac 930
||||||||||||||| ||| | |||| ||| |||||||| ||||||||||| ||||||||
Sbjct: 1 ctaccagcaggtgggtcagatcgaccacaacgccatcctcttcatgaacgagttcaacac 60
Query: 931 gctggagcagcccggcgatcccaaccctgtgcccgccaagtacgtggccaagatgaacca 990
||||||||||||| || ||||| |||| |||||||| | ||||||||||| |
Sbjct: 61 gctggagcagcccatggaccccaatgggacgcccaccaagtacatcgccaagatgaagct 120
Query: 991 gatccgcggctacgccggcaacggtggcctcaagctcggcgtcggcctcgagagccactt 1050
|||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 catccagggctaccccggcaacggcggcctcaagctcggcgtcggcctcgagagccactt 180
Query: 1051 cagcacacccaacatcccgtacatgaggagctcgctggacacgctcgccaagctgaagct 1110
| ||| ||||||||||| ||| | ||| || | || ||||||||||| |||| |||||
Sbjct: 181 ctccacgcccaacatcccctacgtcaggggcgccctcgacacgctcgcgcagctcaagct 240
Query: 1111 gcccatgtggctcaccgaggtggatgtcgtcaagagccccaaccaggtcaagtacctgga 1170
|||||||||| | |||||||| || ||||||||| |||||||||||||||||||||| ||
Sbjct: 241 gcccatgtggatgaccgaggtcgacgtcgtcaagggccccaaccaggtcaagtacctcga 300
Query: 1171 gcaggtgctcagggaaggcttcgcccaccccaacgtcgacggcatcgtcatgtgggcagc 1230
|||||||||||||||||||| ||||||||| || | ||||||||||||||||| ||
Sbjct: 301 gcaggtgctcagggaaggctacgcccacccaggggtgcagggcatcgtcatgtgggccgc 360
Query: 1231 gtggcatgccaggggctgctacgtcatgtgcctcacggacaacagcttcaagaacctccc 1290
||||| |||| || |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 361 atggcacgccaacggatgctacgttatgtgcctcaccgacaacagcttcaagaacctccc 420
Query: 1291 cgtgggcgacctcgtcgacaagctcatcgccgagtggaagacgcaccgcg-cgtccgcca 1349
||| || | |||||| ||||||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 421 cgtcggtgccctcgtagacaagctcatcgccgagtggaagacgca-cgcgacgtctgcca 479
Query: 1350 ccaccga 1356
|||||||
Sbjct: 480 ccaccga 486
>emb|AJ577382.1|TAE577382 Triticum aestivum partial mRNA for putative 1,4-beta-xylanase
Length = 506
Score = 402 bits (203), Expect = e-110
Identities = 418/487 (85%), Gaps = 2/487 (0%)
Strand = Plus / Plus
Query: 871 ctaccagcaggtggggcagctggaccgcaatgccatcctattcatgaacgaattcaacac 930
||||||||||||||| ||| | |||| ||| |||||||| ||||||||||| ||||||||
Sbjct: 1 ctaccagcaggtgggtcagatcgaccacaacgccatcctcttcatgaacgagttcaacac 60
Query: 931 gctggagcagcccggcgatcccaaccctgtgcccgccaagtacgtggccaagatgaacca 990
||||||||||||| || ||||| |||| |||||||| | ||||||||||| |
Sbjct: 61 gctggagcagcccatggaccccaatgggacgcccaccaagtacatcgccaagatgaagct 120
Query: 991 gatccgcggctacgccggcaacggtggcctcaagctcggcgtcggcctcgagagccactt 1050
|||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 catccagggctaccccggcaacggcggcctcaagctcggcgtcggcctcgagagccactt 180
Query: 1051 cagcacacccaacatcccgtacatgaggagctcgctggacacgctcgccaagctgaagct 1110
| ||| ||||||||||| ||| | ||| || | || ||||||||||| |||| |||||
Sbjct: 181 ctccacgcccaacatcccctacgtcaggggcgccctcgacacgctcgcgcagctcaagct 240
Query: 1111 gcccatgtggctcaccgaggtggatgtcgtcaagagccccaaccaggtcaagtacctgga 1170
|||||||||| | |||||||| || ||||||||| |||||||||||||||||||||| ||
Sbjct: 241 gcccatgtggatgaccgaggtcgacgtcgtcaagggccccaaccaggtcaagtacctcga 300
Query: 1171 gcaggtgctcagggaaggcttcgcccaccccaacgtcgacggcatcgtcatgtgggcagc 1230
|||||||||||||||||||| ||||||||| || | ||||||||||||||||| ||
Sbjct: 301 gcaggtgctcagggaaggctacgcccacccaggggtgcagggcatcgtcatgtgggccgc 360
Query: 1231 gtggcatgccaggggctgctacgtcatgtgcctcacggacaacagcttcaagaacctccc 1290
||||| |||| || |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 361 atggcacgccaacggatgctacgttatgtgcctcaccgacaacagcttcaagaacctccc 420
Query: 1291 cgtgggcgacctcgtcgacaagctcatcgccgagtggaagacgcaccgcg-cgtccgcca 1349
||| || | |||||| ||||||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 421 cgtcggtgccctcgtagacaagctcatcgccgagtggaagacgca-cgcgacgtctgcca 479
Query: 1350 ccaccga 1356
|||||||
Sbjct: 480 ccaccga 486
>gb|CD454110.1|CD454110 WHE0973_C08_F15ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0973_C08_F15, mRNA sequence
Length = 647
Score = 260 bits (131), Expect = 3e-067
Identities = 239/271 (88%), Gaps = 3/271 (1%)
Strand = Plus / Minus
Query: 1088 gacacgctcgccaagctgaagctgcccatgtggctcaccgaggtggatgtcgtcaagagc 1147
|||||||||| |||| ||||||||||||||| | |||||||| || ||||||||| ||
Sbjct: 633 gacacgctcgtgcagctcaagctgcccatgtggatgaccgaggtcgacgtcgtcaagggc 574
Query: 1148 cccaaccaggtcaagtacctggagcaggtgctcagggaaggcttcgcccaccccaacgtc 1207
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
Sbjct: 573 cccaaccaggtcaagtacctcgagcaggtgctcagggaaggctacgcccaccccaggggt 514
Query: 1208 g-acggcatcgtcatgtgggcagcgtggcatgccaggggctgctacgtcatgtgcctcac 1266
| | ||||||||||||||||| || ||||| |||| || |||||||| |||||||||||
Sbjct: 513 gcagggcatcgtcatgtgggccgcatggcacgccaacggatgctacgttatgtgcctcac 454
Query: 1267 ggacaacagcttcaagaacctccccgtgggcgacctcgtcgacaagctcatcgccgagtg 1326
|||||||||||||||||||||||||| || | |||||| ||||||||||||||||||||
Sbjct: 453 cgacaacagcttcaagaacctccccgtcggtgccctcgtagacaagctcatcgccgagtg 394
Query: 1327 gaagacgcaccgcg-cgtccgccaccaccga 1356
||||||||| |||| |||| |||||||||||
Sbjct: 393 gaagacgca-cgcgacgtctgccaccaccga 364
>dbj|AB158408.1| Triticum aestivum mRNA for putative 1,4-beta-xylanase, complete cds
Length = 1891
Score = 188 bits (95), Expect = 9e-046
Identities = 170/195 (87%)
Strand = Plus / Plus
Query: 431 gccaacgtgagcatcgagctcctccgcctcggcttcccgttcggcaacgcgatcaccaag 490
|||||||||||| || |||||||||| | ||| ||||||||||||||||| || ||||||
Sbjct: 708 gccaacgtgagcgtcaagctcctccggcccgggttcccgttcggcaacgccatgaccaag 767
Query: 491 gagatcctcggcctcccggcatacgagaagtggttcacgtcgcgcttcagcgtggccacc 550
|||||||||| | ||||||| |||||| |||||||| |||| || |||| |||||||| |
Sbjct: 768 gagatcctcgacatcccggcctacgagcagtggttcgcgtcccggttcaccgtggccagc 827
Query: 551 ttcgagaacgagatgaagtggtacagcaccgagtggacccagaaccatgaggactaccgc 610
||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |
Sbjct: 828 ttcgagaacgagatgaagtggtacagcacggagtggatggagaaccacgaggactacacc 887
Query: 611 gttccggacgccatg 625
|| |||||||||||
Sbjct: 888 gtcgcggacgccatg 902
Score = 123 bits (62), Expect = 5e-026
Identities = 134/158 (84%)
Strand = Plus / Plus
Query: 1163 tacctggagcaggtgctcagggaaggcttcgcccaccccaacgtcgacggcatcgtcatg 1222
||||||||| ||||||| |||||||||| || ||||||||||| || ||||| || |||
Sbjct: 1446 tacctggaggaggtgctgagggaaggctacgggcaccccaacgtggagggcatggtgatg 1505
Query: 1223 tgggcagcgtggcatgccaggggctgctacgtcatgtgcctcacggacaacagcttcaag 1282
||||| || ||||| || |||||| | |||||||||||||||||||||| ||||||
Sbjct: 1506 tgggcggcctggcacgcgcagggctgttgggtcatgtgcctcacggacaacaacttcaac 1565
Query: 1283 aacctccccgtgggcgacctcgtcgacaagctcatcgc 1320
|| ||||||| ||||||| ||||||||||||||||||
Sbjct: 1566 aatctccccgccggcgaccgcgtcgacaagctcatcgc 1603
Score = 121 bits (61), Expect = 2e-025
Identities = 139/165 (84%)
Strand = Plus / Plus
Query: 967 caagtacgtggccaagatgaaccagatccgcggctacgccggcaacggtggcctcaagct 1026
||||||||| |||||| |||| ||||| ||| |||| |||||||| | ||| |||||||
Sbjct: 1244 caagtacgtcgccaagctgaagcagatacgctcctaccccggcaaccgcggcatcaagct 1303
Query: 1027 cggcgtcggcctcgagagccacttcagcacacccaacatcccgtacatgaggagctcgct 1086
|| |||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||
Sbjct: 1304 cgccgtcggcctcgagagccacttcggcacgcccaacatcccctacatgagggcgacgct 1363
Query: 1087 ggacacgctcgccaagctgaagctgcccatgtggctcaccgaggt 1131
||||| |||||| |||| | | | ||||| ||||||||||||||
Sbjct: 1364 ggacatgctcgcgcagctcagggtccccatctggctcaccgaggt 1408
Score = 75.8 bits (38), Expect = 1e-011
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 734 aaggcagccatgcagaagcggctcaagtccgtcgtgtcaccctacgccggcaaggtcatc 793
||||| ||| ||||||||||| ||| ||||| ||||| | ||||||||||||||||||
Sbjct: 1011 aaggcggccctgcagaagcggatcagctccgtggtgtcgcggtacgccggcaaggtcatc 1070
Query: 794 cactgggacgtggtgaacgagaacct 819
|||||||||||||||||||||||
Sbjct: 1071 gcgtgggacgtggtgaacgagaacct 1096
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 290 gacatctgggtggacagtgtctcgctgcagcccttcaccttcgacgagtggga 342
||||||||||||||||| || || |||||||||||| ||||| |||||||||
Sbjct: 567 gacatctgggtggacagcgtgtctctgcagcccttctccttccccgagtggga 619
Score = 54.0 bits (27), Expect = 4e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 206 ggctgctggagcatgctcaagggaggcatgaccgc 240
||||| ||||||||||||||||| |||||||||||
Sbjct: 483 ggctgttggagcatgctcaagggcggcatgaccgc 517
>gb|BE497963.1|BE497963 WHE0958_C06_F12ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0958_C06_F12, mRNA sequence
Length = 525
Score = 170 bits (86), Expect = 2e-040
Identities = 152/174 (87%)
Strand = Plus / Plus
Query: 434 aacgtgagcatcgagctcctccgcctcggcttcccgttcggcaacgcgatcaccaaggag 493
|||||||||||| ||||||||||| || ||||||||||||||| |||| |||||||||
Sbjct: 321 aacgtgagcatccagctcctccgcacagggttcccgttcggcaacacgatgaccaaggag 380
Query: 494 atcctcggcctcccggcatacgagaagtggttcacgtcgcgcttcagcgtggccaccttc 553
||| || || |||||| ||||||||||||||| |||||||||| ||||||||| |
Sbjct: 381 atcatcagcaacccggcctacgagaagtggttcttctcgcgcttcacggtggccaccatg 440
Query: 554 gagaacgagatgaagtggtacagcaccgagtggacccagaaccatgaggactac 607
|||||||||||||||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 441 gagaacgagatgaagtggtacagcacggagtggaaccagaaccaagaggactac 494
Score = 71.9 bits (36), Expect = 1e-010
Identities = 94/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 130 gtcggcacatgtgagggcggtgatcaagt-cccccaacggcgaacgcgtcatcgctggtg 188
|||||| ||||||||||||||| ||||| ||||||||||||| | ||| ||| || |
Sbjct: 10 gtcggcccatgtgagggcggtggtcaagggcccccaacggcgagaacatcaccgccggcg 69
Query: 189 ccatcgttgcccagtcgggctgctggagcatgctcaagggaggcatgaccgc 240
||||| |||||||| |||||||||| |||||||||||| || ||||||||
Sbjct: 70 gcatcgacgcccagtccggctgctggaccatgctcaagggcggtatgaccgc 121
Score = 67.9 bits (34), Expect = 2e-009
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 290 gacatctgggtggacagtgtctcgctgcagcccttcaccttcgacgagtgggacggtcac 349
|||||||||||||| ||||| || |||||||||||| |||| || || ||||||| |||
Sbjct: 177 gacatctgggtggatagtgtttccctgcagcccttctcctttgatgaatgggacgcccac 236
Query: 350 acccgccgctccgccgacaagg 371
||||||| |||||||| ||||
Sbjct: 237 gcccgccggtccgccgataagg 258
>gb|CN010320.1|CN010320 WHE3869_C03_F05ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3869_C03_F05,
mRNA sequence
Length = 604
Score = 163 bits (82), Expect = 5e-038
Identities = 142/162 (87%)
Strand = Plus / Plus
Query: 464 ttcccgttcggcaacgcgatcaccaaggagatcctcggcctcccggcatacgagaagtgg 523
||||||||||||||||| || |||||||||||||||| | ||||||| |||||| |||||
Sbjct: 27 ttcccgttcggcaacgccatgaccaaggagatcctcgacatcccggcctacgagcagtgg 86
Query: 524 ttcacgtcgcgcttcagcgtggccaccttcgagaacgagatgaagtggtacagcaccgag 583
||| |||| || |||| |||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 87 ttcgcgtcccggttcaccgtggccagcttcgagaacgagatgaagtggtacagcacggag 146
Query: 584 tggacccagaaccatgaggactaccgcgttccggacgccatg 625
|||| ||||||| ||||||||| ||| |||||||||||
Sbjct: 147 tggatggagaaccacgaggactacaccgtcgcggacgccatg 188
Score = 75.8 bits (38), Expect = 1e-011
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 734 aaggcagccatgcagaagcggctcaagtccgtcgtgtcaccctacgccggcaaggtcatc 793
||||| ||| ||||||||||| ||| ||||| ||||| | ||||||||||||||||||
Sbjct: 297 aaggcggccctgcagaagcggatcagctccgtggtgtcgcggtacgccggcaaggtcatc 356
Query: 794 cactgggacgtggtgaacgagaacct 819
|||||||||||||||||||||||
Sbjct: 357 gcgtgggacgtggtgaacgagaacct 382
Score = 52.0 bits (26), Expect = 1e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 967 caagtacgtggccaagatgaaccagatccgcggctacgccggcaacggtggcctcaagct 1026
||||||||| |||||| |||| ||||| ||| |||| |||||||| | ||| ||||||
Sbjct: 531 caagtacgtcgccaagctgaagcagatacgctcctaccccggcaaccgcggcaccaagct 590
Query: 1027 cggcgtcggcctcg 1040
|| |||||||||||
Sbjct: 591 cgccgtcggcctcg 604
>gb|CA741209.1|CA741209 wia1c.pk001.i20 wia1c Triticum aestivum cDNA clone wia1c.pk001.i20
5' end, mRNA sequence
Length = 550
Score = 147 bits (74), Expect = 3e-033
Identities = 167/196 (85%), Gaps = 4/196 (2%)
Strand = Plus / Plus
Query: 45 gtcccacagcgtgtaccagagaatccagatgcagagcgacaggcactactcgctatcagc 104
|||||||||||| ||||||| | ||||||||||| |||||| |||||||||||||||||
Sbjct: 331 gtcccacagcgtctaccagaaagtccagatgcagggcgacacccactactcgctatcagc 390
Query: 105 atggcctgcaggtgtcgaacggcacgtcggcacatgtgagggcggtgatcaagtccccca 164
|||| ||||| |||||| ||||| |||| || |||||||||||| ||||| ||||||
Sbjct: 391 atgg-ctgcaagtgtcggccggca---cggctcacgtgagggcggtggtcaaggccccca 446
Query: 165 acggcgaacgcgtcatcgctggtgccatcgttgcccagtcgggctgctggagcatgctca 224
||||||| | ||| ||| || ||||||| |||||||| |||||||||| ||||||||
Sbjct: 447 acggcgagaacatcaccgccggcgccatcgacgcccagtccggctgctggaccatgctca 506
Query: 225 agggaggcatgaccgc 240
|||| |||||||||||
Sbjct: 507 agggcggcatgaccgc 522
>gb|CA741856.1|CA741856 wia1c.pk002.i1 wia1c Triticum aestivum cDNA clone wia1c.pk002.i1 5'
end, mRNA sequence
Length = 503
Score = 125 bits (63), Expect = 1e-026
Identities = 101/111 (90%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 1247 tgctacgtcatgtgcctcacggacaacagcttcaagaacctccccgtgggcgacctcgtc 1306
|||||||||||||||||||| ||||||| |||||||||||||||||| || | ||||||
Sbjct: 82 tgctacgtcatgtgcctcaccgacaacaccttcaagaacctccccgtcggtgccctcgta 141
Query: 1307 gacaagctcatcgccgagtggaagacgcaccgcg-cgtccgccaccaccga 1356
||||||||||| ||||||||||||||||| |||| |||| |||||||||||
Sbjct: 142 gacaagctcattgccgagtggaagacgca-cgcgacgtctgccaccaccga 191
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1300 cctcgtcgacaagctcatcgccgagtggaagacgcac 1336
|||||| ||||||||||| ||||||||||||||||||
Sbjct: 13 cctcgtagacaagctcattgccgagtggaagacgcac 49
>gb|CA596996.1|CA596996 wpa1c.pk014.b7 wpa1c Triticum aestivum cDNA clone wpa1c.pk014.b7 5'
end, mRNA sequence
Length = 604
Score = 115 bits (58), Expect = 1e-023
Identities = 163/196 (83%), Gaps = 4/196 (2%)
Strand = Plus / Plus
Query: 45 gtcccacagcgtgtaccagagaatccagatgcagagcgacaggcactactcgctatcagc 104
|||||||||||| ||||||| | ||||||||||| |||||| ||||||||||| |||||
Sbjct: 319 gtcccacagcgtctaccagaaagtccagatgcagggcgacacccactactcgctgtcagc 378
Query: 105 atggcctgcaggtgtcgaacggcacgtcggcacatgtgagggcggtgatcaagtccccca 164
|||| |||| |||||| ||| ||| || ||||||||||||||| ||||| ||||||
Sbjct: 379 atggt-tgcaagtgtcggccgggacg---gcccatgtgagggcggtggtcaaggccccca 434
Query: 165 acggcgaacgcgtcatcgctggtgccatcgttgcccagtcgggctgctggagcatgctca 224
||||||| | ||| ||| || | ||||| |||||||| |||||||||| ||||||||
Sbjct: 435 acggcgagaacatcaccgccggcggcatcgacgcccagtccggctgctggaccatgctca 494
Query: 225 agggaggcatgaccgc 240
|||| || ||||||||
Sbjct: 495 agggcggtatgaccgc 510
Score = 48.1 bits (24), Expect = 0.002
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 290 gacatctgggtggacagtgtctcgctgcagcccttc 325
|||||||||||||| ||||| || ||||||||||||
Sbjct: 566 gacatctgggtggatagtgtttccctgcagcccttc 601
>gb|BE498047.1|BE498047 WHE0951_B03_C05ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0951_B03_C05, mRNA sequence
Length = 617
Score = 113 bits (57), Expect = 4e-023
Identities = 147/177 (83%)
Strand = Plus / Plus
Query: 1161 agtacctggagcaggtgctcagggaaggcttcgcccaccccaacgtcgacggcatcgtca 1220
||||||||||| | ||||| |||||||||| || |||||||||||| || ||||| ||
Sbjct: 352 agtacctggaggacgtgctgagggaaggctacggccaccccaacgtggagggcatggtgc 411
Query: 1221 tgtgggcagcgtggcatgccaggggctgctacgtcatgtgcctcacggacaacagcttca 1280
| ||||| || ||||| ||||||| |||||||||||||||||||||| |||||
Sbjct: 412 tctgggcggcatggcacaagcacggctgctgggtcatgtgcctcacggacaacaacttca 471
Query: 1281 agaacctccccgtgggcgacctcgtcgacaagctcatcgccgagtggaagacgcacc 1337
||||||||| ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 472 cgaacctcccaaccggcaacgtcgtcgacaagctcatcgccgagtggaagacgcacc 528
Score = 85.7 bits (43), Expect = 1e-014
Identities = 133/163 (81%)
Strand = Plus / Plus
Query: 967 caagtacgtggccaagatgaaccagatccgcggctacgccggcaacggtggcctcaagct 1026
|||||||| ||||||||| | ||||||||| |||| |||| |||| ||| ||| |||
Sbjct: 152 caagtacgccgccaagatggagcagatccgctcctaccccggaaacgccggcatcaggct 211
Query: 1027 cggcgtcggcctcgagagccacttcagcacacccaacatcccgtacatgaggagctcgct 1086
|| |||||| ||||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 212 cgccgtcgggctcgagagccacttcgagacgcccaacctcccgtacatgagggcgacgct 271
Query: 1087 ggacacgctcgccaagctgaagctgcccatgtggctcaccgag 1129
||||| |||||| |||| ||| | ||||| ||||||||||||
Sbjct: 272 ggacatgctcgcgcagctcaaggtccccatctggctcaccgag 314
>emb|AJ577381.1|TAE577381 Triticum aestivum partial mRNA for putative anther endoxylanase
Length = 529
Score = 113 bits (57), Expect = 4e-023
Identities = 147/177 (83%)
Strand = Plus / Plus
Query: 1161 agtacctggagcaggtgctcagggaaggcttcgcccaccccaacgtcgacggcatcgtca 1220
||||||||||| | ||||| |||||||||| || |||||||||||| || ||||| ||
Sbjct: 319 agtacctggaggacgtgctgagggaaggctacggccaccccaacgtggagggcatggtgc 378
Query: 1221 tgtgggcagcgtggcatgccaggggctgctacgtcatgtgcctcacggacaacagcttca 1280
| ||||| || ||||| ||||||| |||||||||||||||||||||| |||||
Sbjct: 379 tctgggcggcatggcacaagcacggctgctgggtcatgtgcctcacggacaacaacttca 438
Query: 1281 agaacctccccgtgggcgacctcgtcgacaagctcatcgccgagtggaagacgcacc 1337
||||||||| ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 439 cgaacctcccaaccggcaacgtcgtcgacaagctcatcgccgagtggaagacgcacc 495
Score = 85.7 bits (43), Expect = 1e-014
Identities = 133/163 (81%)
Strand = Plus / Plus
Query: 967 caagtacgtggccaagatgaaccagatccgcggctacgccggcaacggtggcctcaagct 1026
|||||||| ||||||||| | ||||||||| |||| |||| |||| ||| ||| |||
Sbjct: 119 caagtacgccgccaagatggagcagatccgctcctaccccggaaacgccggcatcaggct 178
Query: 1027 cggcgtcggcctcgagagccacttcagcacacccaacatcccgtacatgaggagctcgct 1086
|| |||||| ||||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 179 cgccgtcgggctcgagagccacttcgagacgcccaacctcccgtacatgagggcgacgct 238
Query: 1087 ggacacgctcgccaagctgaagctgcccatgtggctcaccgag 1129
||||| |||||| |||| ||| | ||||| ||||||||||||
Sbjct: 239 ggacatgctcgcgcagctcaaggtccccatctggctcaccgag 281
>gb|BJ209203.1|BJ209203 BJ209203 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh13b24 5', mRNA sequence
Length = 661
Score = 52.0 bits (26), Expect = 1e-004
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 1032 tcggcctcgagagccacttcagcacacccaacatcccgtacatgaggagctcgctggaca 1091
||||||||||| |||||||| || ||||||||||| ||||||||| | ||| ||||
Sbjct: 254 tcggcctcgagggccacttctccaggcccaacatcccctacatgagggccgtgctcgaca 313
Query: 1092 cgctcgccaagctgaagctgcccatgtggctcaccgag 1129
||| |||| ||| || |||||||| ||| ||||||||
Sbjct: 314 agctggccacgctcaacctgcccatctggttcaccgag 351
>gb|CD893893.1|CD893893 G118.124M24F010828 G118 Triticum aestivum cDNA clone G118124M24, mRNA
sequence
Length = 730
Score = 46.1 bits (23), Expect = 0.009
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1032 tcggcctcgagagccacttcagcacacccaacatcccgtacatgagg 1078
||||||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 214 tcggcctcgagggccacttctccaagcccaacatcccctacatgagg 260
>gb|CD893894.1|CD893894 G118.124M24R011116 G118 Triticum aestivum cDNA clone G118124M24, mRNA
sequence
Length = 734
Score = 46.1 bits (23), Expect = 0.009
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1032 tcggcctcgagagccacttcagcacacccaacatcccgtacatgagg 1078
||||||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 630 tcggcctcgagggccacttctccaagcccaacatcccctacatgagg 584
>gb|AJ609810.1|AJ609810 AJ609810 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 00274R, mRNA
sequence
Length = 514
Score = 44.1 bits (22), Expect = 0.034
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 292 catctgggtggacagtgtctcgctgcagcccttc 325
|||||||||||||| || |||||||||||||||
Sbjct: 251 catctgggtggacaacgtgtcgctgcagcccttc 284
>gb|BE443538.1|BE443538 WHE1115_B01_D01ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1115_B01_D01,
mRNA sequence
Length = 655
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 117 acctcgtcgacaagctcaccgccga 141
>gb|BE445087.1|BE445087 WHE1131_A11_B21ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1131_A11_B21,
mRNA sequence
Length = 514
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 71 acctcgtcgacaagctcaccgccga 95
>gb|BE499038.1|BE499038 WHE0969_A02_B03ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0969_A02_B03, mRNA sequence
Length = 487
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 98 acctcgtcgacaagctcaccgccga 122
>gb|BE500398.1|BE500398 WHE0982_B12_D24ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0982_B12_D24, mRNA sequence
Length = 207
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 61 acctcgtcgacaagctcaccgccga 85
>gb|BF474645.1|BF474645 WHE2108_D07_H14ZS Wheat salt-stressed crown cDNA library Triticum
aestivum cDNA clone WHE2108_D07_H14, mRNA sequence
Length = 420
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 258 acctcgtcgacaagctcaccgccga 282
>gb|BF483767.1|BF483767 WHE2308_E07_J14ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2308_E07_J14, mRNA sequence
Length = 570
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 129 acctcgtcgacaagctcaccgccga 153
>gb|BQ752856.1|BQ752856 WHE4119_H09_P17ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4119_H09_P17, mRNA sequence
Length = 846
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 127 acctcgtcgacaagctcaccgccga 151
>gb|BU100678.1|BU100678 WHE3356_C10_E20ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3356_C10_E20,
mRNA sequence
Length = 691
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 28 acctcgtcgacaagctcaccgccga 52
>gb|BU101019.1|BU101019 WHE3360_G08_M16ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3360_G08_M16,
mRNA sequence
Length = 715
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 134 acctcgtcgacaagctcaccgccga 158
>gb|BU101110.1|BU101110 WHE3361_G08_N15ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3361_G08_N15,
mRNA sequence
Length = 507
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 148 acctcgtcgacaagctcaccgccga 172
>gb|BJ207596.1|BJ207596 BJ207596 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4i09 5', mRNA sequence
Length = 654
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 135 acctcgtcgacaagctcaccgccga 159
>gb|BJ210270.1|BJ210270 BJ210270 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh27b24 5', mRNA sequence
Length = 623
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 100 acctcgtcgacaagctcaccgccga 124
>gb|BJ210295.1|BJ210295 BJ210295 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh27d16 5', mRNA sequence
Length = 474
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 51 acctcgtcgacaagctcaccgccga 75
>gb|BJ211251.1|BJ211251 BJ211251 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh38l05 5', mRNA sequence
Length = 619
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 147 acctcgtcgacaagctcaccgccga 171
>gb|BJ214882.1|BJ214882 BJ214882 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4i09 3', mRNA sequence
Length = 697
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 683 acctcgtcgacaagctcaccgccga 659
>gb|BJ259085.1|BJ259085 BJ259085 Y. Ogihara unpublished cDNA library, Wh_h Triticum aestivum
cDNA clone whh14n22 5', mRNA sequence
Length = 662
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 141 acctcgtcgacaagctcaccgccga 165
>gb|BJ259297.1|BJ259297 BJ259297 Y. Ogihara unpublished cDNA library, Wh_h Triticum aestivum
cDNA clone whh12f16 5', mRNA sequence
Length = 593
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 129 acctcgtcgacaagctcaccgccga 153
>gb|BJ279938.1|BJ279938 BJ279938 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr5l02 5', mRNA sequence
Length = 657
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 136 acctcgtcgacaagctcaccgccga 160
>gb|BJ289889.1|BJ289889 BJ289889 Y. Ogihara unpublished cDNA library, Wh_SL Triticum aestivum
cDNA clone whsl7l06 5', mRNA sequence
Length = 562
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 66 acctcgtcgacaagctcaccgccga 90
>gb|BJ300478.1|BJ300478 BJ300478 Y. Ogihara unpublished cDNA library, Wh_yd Triticum aestivum
cDNA clone whyd2h18 5', mRNA sequence
Length = 659
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 77 acctcgtcgacaagctcaccgccga 101
>gb|CD895569.1|CD895569 G174.100D08F010705 G174 Triticum aestivum cDNA clone G174100D08, mRNA
sequence
Length = 555
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 119 acctcgtcgacaagctcaccgccga 143
>gb|CD924152.1|CD924152 G750.111L24F010705 G750 Triticum aestivum cDNA clone G750111L24, mRNA
sequence
Length = 641
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 115 acctcgtcgacaagctcaccgccga 139
>gb|CD930782.1|CD930782 GR45.112F19F010418 GR45 Triticum aestivum cDNA clone GR45112F19, mRNA
sequence
Length = 556
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 123 acctcgtcgacaagctcaccgccga 147
>gb|CD931143.1|CD931143 GR45.113J21F010419 GR45 Triticum aestivum cDNA clone GR45113J21, mRNA
sequence
Length = 569
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 142 acctcgtcgacaagctcaccgccga 166
>gb|CD931144.1|CD931144 GR45.113J21F010511 GR45 Triticum aestivum cDNA clone GR45113J21, mRNA
sequence
Length = 571
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 143 acctcgtcgacaagctcaccgccga 167
>gb|CD935713.1|CD935713 OV.102E08F010202 OV Triticum aestivum cDNA clone OV102E08, mRNA
sequence
Length = 696
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 122 acctcgtcgacaagctcaccgccga 146
>gb|CK196588.1|CK196588 FGAS005047 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum
cDNA, mRNA sequence
Length = 834
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 245 acctcgtcgacaagctcaccgccga 269
>gb|CV762492.1|CV762492 FGAS056881 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 818
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 226 acctcgtcgacaagctcaccgccga 250
>gb|CV782371.1|CV782371 FGAS076784 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 829
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 223 acctcgtcgacaagctcaccgccga 247
>gb|DR741422.1|DR741422 FGAS030477 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 1084
Score = 42.1 bits (21), Expect = 0.13
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1299 acctcgtcgacaagctcatcgccga 1323
|||||||||||||||||| ||||||
Sbjct: 144 acctcgtcgacaagctcaccgccga 168
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 449,391
Number of Sequences: 636343
Number of extensions: 449391
Number of successful extensions: 132088
Number of sequences better than 0.5: 45
Number of HSP's better than 0.5 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131985
Number of HSP's gapped (non-prelim): 87
length of query: 1827
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1807
effective length of database: 354,513,379
effective search space: 640605675853
effective search space used: 640605675853
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)