BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3202900.2.1
         (938 letters)

Database: Triticum_nucl_with_EST.fasta 
           636,343 sequences; 367,240,239 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BI750794.1|BI750794  Ta01_09f09_R Ta01_AAFC_ECORC_Fusariu...    40   0.27 

>gb|BI750794.1|BI750794 Ta01_09f09_R
           Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
           ads Triticum aestivum cDNA clone Ta01_09f09, mRNA
           sequence
          Length = 696

 Score = 40.1 bits (20), Expect = 0.27
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 283 tcatcatcttcctcatcgtcaaattcctcctc 314
           ||||||||||||| ||| |||| |||||||||
Sbjct: 506 tcatcatcttcctgatcctcaacttcctcctc 537



  Database: Triticum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  3:01 PM
  Number of letters in database: 367,240,239
  Number of sequences in database:  636,343
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 194,968
Number of Sequences: 636343
Number of extensions: 194968
Number of successful extensions: 56832
Number of sequences better than  0.5: 1
Number of HSP's better than  0.5 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56830
Number of HSP's gapped (non-prelim): 2
length of query: 938
length of database: 367,240,239
effective HSP length: 20
effective length of query: 918
effective length of database: 354,513,379
effective search space: 325443281922
effective search space used: 325443281922
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)