BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198841.2.2
(602 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ611273.1|AJ611273 AJ611273 Triticum turgidum subsp. du... 319 1e-085
gb|BE591175.1|BE591175 WHE1655-1658_O09_O09ZS Wheat heat st... 305 2e-081
gb|CD921345.1|CD921345 G608.120E18F010913 G608 Triticum aes... 293 7e-078
gb|BG312728.1|BG312728 WHE2457_D10_H19ZS Triticum monococcu... 280 1e-073
gb|CD870225.1|CD870225 AZO2.113M15F001120 AZO2 Triticum aes... 264 6e-069
gb|BE406587.1|BE406587 WHE0418_g08_m16zB Wheat etiolated se... 252 2e-065
gb|CA729940.1|CA729940 wip1c.pk002.n14 wip1c Triticum aesti... 208 3e-052
gb|BQ904353.1|BQ904353 Ta04_03a02_R Ta04_AAFC_ECORC_Fusariu... 202 2e-050
gb|CA743038.1|CA743038 wri1s.pk002.k13 wri1s Triticum aesti... 202 2e-050
gb|DR736779.1|DR736779 FGAS082149 Triticum aestivum FGAS: L... 190 8e-047
gb|BG907657.1|BG907657 TaLr1161G09R TaLr1 Triticum aestivum... 184 5e-045
gb|CD904575.1|CD904575 G468.001C06F010509 G468 Triticum aes... 182 2e-044
gb|CV782258.1|CV782258 FGAS076671 Triticum aestivum FGAS: L... 182 2e-044
gb|CV780638.1|CV780638 FGAS075049 Triticum aestivum FGAS: L... 143 2e-032
gb|CV774521.1|CV774521 FGAS068920 Triticum aestivum FGAS: L... 127 9e-028
gb|BJ248187.1|BJ248187 BJ248187 Y. Ogihara unpublished cDNA... 105 3e-021
gb|BQ802999.1|BQ802999 WHE2832_E09_J18ZS Triticum monococcu... 103 1e-020
gb|CA743138.1|CA743138 wri1s.pk002.d18 wri1s Triticum aesti... 101 5e-020
gb|BE497128.1|BE497128 WHE0764_F02_K04ZS Wheat heat-stresse... 100 2e-019
gb|CD913931.1|CD913931 G550.119N09F010712 G550 Triticum aes... 92 5e-017
gb|BM140450.1|BM140450 WHE0483_g11_m21zS Wheat Fusarium gra... 48 7e-004
>gb|AJ611273.1|AJ611273 AJ611273 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04555R, mRNA
sequence
Length = 617
Score = 319 bits (161), Expect = 1e-085
Identities = 354/417 (84%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 173 gatcaatggttcaaaccctgatgactatgagaaatttgagaaagggataatgcactatgg 232
|||||||||||| | ||||||| ||||| |||||||| || || ||||||| |||||
Sbjct: 40 gatcaatggttccgagtctgatgagtatgaaaaatttgacaagggattaatgcagtatgg 99
Query: 233 gtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttga 292
||| ||||||| ||||||||||||||||| |||| || ||||||||||| ||||||||
Sbjct: 100 atgtgcacattaccgaaggagatgccgcatacgagcaccatgctgcaatgagatttttga 159
Query: 293 ttgccgacactgccacaatgaaactaagaattccattaaaattgataaaatgaagaggca 352
|||||| ||||||||||||||| | |||||||| || |||||||||| | | | ||
Sbjct: 160 ttgccggcactgccacaatgaatcaaagaattcgatcaaaattgatactcctacgcgaca 219
Query: 353 tgaacttccacgccatgaagtgcagcaggttgtatgctcattgtgtggcactgaacagga 412
||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 220 tgaacttccacgccatgaactgcagcaggtcatatgcacattgtgtggcactgaacaaga 279
Query: 413 ggtgcgacaagtatgtatcaattgcggtgtttgcatggggaagtacttctgtggtttgtg 472
||| ||||||||||| ||||| || ||||| |||||||| ||||| ||||||| ||||
Sbjct: 280 ggtacgacaagtatgcatcaactgtggtgtatgcatgggaaagtatttctgtgaagtgtg 339
Query: 473 caaactcttcgacgatgatgtctctaaacagcagtatcactgcaacggatgtggaatatg 532
||| ||||| || ||||||||||| |||||||||||||||||| | | |||||||||||
Sbjct: 340 caagctctttgatgatgatgtctcaaaacagcagtatcactgccatgcgtgtggaatatg 399
Query: 533 tagaatcggaggcagggagaattccttccactgttcaaaa-gtggatgttgctattc 588
|||||| || ||||||||||||| ||| ||||| |||||| | |||||||| |||||
Sbjct: 400 tagaattggtggcagggagaatttctttcactgctcaaaatgcggatgttgttattc 456
>gb|BE591175.1|BE591175 WHE1655-1658_O09_O09ZS Wheat heat stressed flag leaf cDNA library
Triticum aestivum cDNA clone WHE1655-1658_O09_O09, mRNA
sequence
Length = 591
Score = 305 bits (154), Expect = 2e-081
Identities = 317/370 (85%), Gaps = 1/370 (0%)
Strand = Plus / Plus
Query: 220 taatgcactatgggtgtccacattatagaaggagatgccgcataagagctccttgctgca 279
||||||| ||||| ||| ||||||| ||||||||||||||||| |||| || |||||||
Sbjct: 19 taatgcagtatggatgtgcacattaccgaaggagatgccgcatacgagcaccatgctgca 78
Query: 280 atgaaatttttgattgccgacactgccacaatgaaactaagaattccattaaaattgata 339
|||| |||||||||||||| ||||||||||||||| | |||||||| || ||||||||||
Sbjct: 79 atgagatttttgattgccggcactgccacaatgaatcaaagaattcgatcaaaattgata 138
Query: 340 aaatgaagaggcatgaacttccacgccatgaagtgcagcaggttgtatgctcattgtgtg 399
| | | ||||||||||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 139 ctcctacgcgacatgaacttccacgccatgaactgcagcaggtcatatgcacattgtgtg 198
Query: 400 gcactgaacaggaggtgcgacaagtatgtatcaattgcggtgtttgcatggggaagtact 459
|||||||||| ||||| ||||||||||| ||||| || ||||| |||||||| ||||| |
Sbjct: 199 gcactgaacaagaggtacgacaagtatgcatcaactgtggtgtatgcatgggaaagtatt 258
Query: 460 tctgtggtttgtgcaaactcttcgacgatgatgtctctaaacagcagtatcactgcaacg 519
|||||| ||||||| ||||| || ||||||||||| |||||||||||||||||| | |
Sbjct: 259 tctgtgaagtgtgcaagctctttgatgatgatgtctcaaaacagcagtatcactgccatg 318
Query: 520 gatgtggaatatgtagaatcggaggcagggagaattccttccactgttcaaaa-gtggat 578
||||||||||||||||| || ||||||||||||| ||| ||||| |||||| | ||||
Sbjct: 319 cgtgtggaatatgtagaattggtggcagggagaatttctttcactgctcaaaatgcggat 378
Query: 579 gttgctattc 588
|||| |||||
Sbjct: 379 gttgttattc 388
>gb|CD921345.1|CD921345 G608.120E18F010913 G608 Triticum aestivum cDNA clone G608120E18,
mRNA sequence
Length = 689
Score = 293 bits (148), Expect = 7e-078
Identities = 326/384 (84%), Gaps = 1/384 (0%)
Strand = Plus / Plus
Query: 206 atttgagaaagggataatgcactatgggtgtccacattatagaaggagatgccgcataag 265
||||||||| || ||||||| ||||| ||| | ||||| ||||||||||||||||| |
Sbjct: 56 atttgagaagggattaatgcagtatggatgtgcgcattaccgaaggagatgccgcatacg 115
Query: 266 agctccttgctgcaatgaaatttttgattgccgacactgccacaatgaaactaagaattc 325
|||||| ||||||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 116 agctccgtgctgcaatgagatttttgattgccggcactgccacaatgaatcaaagaattc 175
Query: 326 cattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagcaggttgt 385
||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |
Sbjct: 176 gattaaaattgatactgctaggagacatgaacttccacgccatgaactgcagcaggtcat 235
Query: 386 atgctcattgtgtggcactgaacaggaggtgcgacaagtatgtatcaattgcggtgtttg 445
|||||||||||||||||||||||| ||||| | |||| ||| || | ||| ||||| ||
Sbjct: 236 atgctcattgtgtggcactgaacaagaggtacaacaaacatgcataagttgtggtgtatg 295
Query: 446 catggggaagtacttctgtggtttgtgcaaactcttcgacgatgatgtctctaaacagca 505
|||||| ||||| ||||||| ||||||| ||||| || ||||||||||| ||| ||||
Sbjct: 296 catgggaaagtatttctgtgaagtgtgcaagctctttgatgatgatgtctcaaaagagca 355
Query: 506 gtatcactgcaacggatgtggaatatgtagaatcggaggcagggagaattccttccactg 565
|||||||||| | | ||||||||||||||||| || ||||||||||||| ||| |||||
Sbjct: 356 gtatcactgccatgtgtgtggaatatgtagaattggtggcagggagaatttctttcactg 415
Query: 566 ttcaaaa-gtggatgttgctattc 588
|||||| | |||||||| |||||
Sbjct: 416 ctcaaaatgcggatgttgttattc 439
>gb|BG312728.1|BG312728 WHE2457_D10_H19ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2457_D10_H19,
mRNA sequence
Length = 404
Score = 280 bits (141), Expect = 1e-073
Identities = 274/317 (86%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 273 tgctgcaatgaaatttttgattgccgacactgccacaatgaaactaagaattccattaaa 332
||||||||||| |||||||||||||| ||||||||||||||| | |||||||| ||||||
Sbjct: 5 tgctgcaatgagatttttgattgccggcactgccacaatgaatcaaagaattcgattaaa 64
Query: 333 attgataaaatgaagaggcatgaacttccacgccatgaagtgcagcaggttgtatgctca 392
||||||| | | | ||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 65 attgatactcctaggcgacatgaacttccacgccatgaactgcagcaggtcatatgctca 124
Query: 393 ttgtgtggcactgaacaggaggtgcgacaagtatgtatcaattgcggtgtttgcatgggg 452
||||||||||||||||| ||||| |||||| |||| ||||| || ||||| ||||||||
Sbjct: 125 ttgtgtggcactgaacaagaggtacgacaaatatgcatcaactgtggtgtatgcatggga 184
Query: 453 aagtacttctgtggtttgtgcaaactcttcgacgatgatgtctctaaacagcagtatcac 512
||||| ||||||| ||||||| ||||| || ||||||||||| |||||||||||||||
Sbjct: 185 aagtatttctgtgaagtgtgcaagctctttgatgatgatgtctcaaaacagcagtatcac 244
Query: 513 tgcaacggatgtggaatatgtagaatcggaggcagggagaattccttccactgttcaaaa 572
||| | | ||||||||||| ||||| || ||||||||||||| ||||||||| ||||||
Sbjct: 245 tgccatgcgtgtggaatatgcagaattggtggcagggagaatttcttccactgctcaaaa 304
Query: 573 -gtggatgttgctattc 588
|||||||||| |||||
Sbjct: 305 tgtggatgttgttattc 321
>gb|CD870225.1|CD870225 AZO2.113M15F001120 AZO2 Triticum aestivum cDNA clone AZO2113M15,
mRNA sequence
Length = 691
Score = 264 bits (133), Expect = 6e-069
Identities = 272/317 (85%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 273 tgctgcaatgaaatttttgattgccgacactgccacaatgaaactaagaattccattaaa 332
||||||||||| |||||||||||||| ||||||||||||||| | |||||||| || |||
Sbjct: 20 tgctgcaatgagatttttgattgccggcactgccacaatgaatcaaagaattcgatcaaa 79
Query: 333 attgataaaatgaagaggcatgaacttccacgccatgaagtgcagcaggttgtatgctca 392
||||||| | | | ||||||||||||||||||||| |||||||||| ||||| ||
Sbjct: 80 attgatactcctacgcgacatgaacttccacgccatgaactgcagcaggtcatatgcaca 139
Query: 393 ttgtgtggcactgaacaggaggtgcgacaagtatgtatcaattgcggtgtttgcatgggg 452
||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||||||
Sbjct: 140 ttgtgtggcactgaacaagaggtacgacaagtatgcatcaactgtggtgtatgcatggga 199
Query: 453 aagtacttctgtggtttgtgcaaactcttcgacgatgatgtctctaaacagcagtatcac 512
||||| ||||||| ||||||| ||||| || ||||||||||| |||||||||||||||
Sbjct: 200 aagtatttctgtgaagtgtgcaagctctttgatgatgatgtctcaaaacagcagtatcac 259
Query: 513 tgcaacggatgtggaatatgtagaatcggaggcagggagaattccttccactgttcaaaa 572
||| | | ||||||||||||||||| || ||||||||||||| ||| ||||| ||||||
Sbjct: 260 tgccatgcgtgtggaatatgtagaattggtggcagggagaatttctttcactgctcaaaa 319
Query: 573 -gtggatgttgctattc 588
| |||||||| |||||
Sbjct: 320 tgcggatgttgttattc 336
>gb|BE406587.1|BE406587 WHE0418_g08_m16zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0418_g08_m16, mRNA
sequence
Length = 347
Score = 252 bits (127), Expect = 2e-065
Identities = 289/343 (84%)
Strand = Plus / Plus
Query: 190 ctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattatagaa 249
||||||| ||||| |||||||| || || ||||||| ||||| ||| ||||||| |||
Sbjct: 5 ctgatgagtatgaaaaatttgacaagggattaatgcagtatggatgtgcacattaccgaa 64
Query: 250 ggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgccaca 309
|||||||||||||| |||| || ||||||||||| |||||||||||||| ||||||||||
Sbjct: 65 ggagatgccgcatacgagcaccatgctgcaatgagatttttgattgccggcactgccaca 124
Query: 310 atgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgccatg 369
||||| | |||||||| || |||||||||| | | | |||||||||||||||||||
Sbjct: 125 atgaatcaaagaattcgatcaaaattgatactcctacgcgacatgaacttccacgccatg 184
Query: 370 aagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatgta 429
|| |||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 185 aactgcagcaggtcatatgcacattgtgtggcactgaacaagaggtacgacaagtatgca 244
Query: 430 tcaattgcggtgtttgcatggggaagtacttctgtggtttgtgcaaactcttcgacgatg 489
| | || ||||| |||||||| ||||| ||||||| ||||||| ||||| || ||||
Sbjct: 245 tttactgtggtgtatgcatgggaaagtatttctgtgaagtgtgcaagctctttgatgatg 304
Query: 490 atgtctctaaacagcagtatcactgcaacggatgtggaatatg 532
||||||| ||||||||||||| |||| | | |||||||||||
Sbjct: 305 atgtctcaaaacagcagtatccctgccatgcgtgtggaatatg 347
>gb|CA729940.1|CA729940 wip1c.pk002.n14 wip1c Triticum aestivum cDNA clone wip1c.pk002.n14
5' end, mRNA sequence
Length = 625
Score = 208 bits (105), Expect = 3e-052
Identities = 243/290 (83%)
Strand = Plus / Plus
Query: 173 gatcaatggttcaaaccctgatgactatgagaaatttgagaaagggataatgcactatgg 232
|||||||||||| | ||||||| ||||| |||||||| || || ||||||| |||||
Sbjct: 336 gatcaatggttccgagtctgatgagtatgaaaaatttgacaagggattaatgcagtatgg 395
Query: 233 gtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttga 292
||| ||||||| ||||||||||||||||| |||| || ||||||||||| ||||||||
Sbjct: 396 atgtgcacattaccgaaggagatgccgcatacgagcaccatgctgcaatgagatttttga 455
Query: 293 ttgccgacactgccacaatgaaactaagaattccattaaaattgataaaatgaagaggca 352
|||||| ||||||||||||||| | |||||||| || |||||||||| | | | ||
Sbjct: 456 ttgccggcactgccacaatgaatcaaagaattcgatcaaaattgatactcctacgcgaca 515
Query: 353 tgaacttccacgccatgaagtgcagcaggttgtatgctcattgtgtggcactgaacagga 412
||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||| |
Sbjct: 516 tgaacttccacgccatgaactgcagcaggtcatatgcacattgtgtggcactgaacaagn 575
Query: 413 ggtgcgacaagtatgtatcaattgcggtgtttgcatggggaagtacttct 462
| ||||||||||| ||||| || ||||| |||||||| ||||| ||||
Sbjct: 576 nntacgacaagtatgcatcaactgtggtgtatgcatgggaaagtatttct 625
>gb|BQ904353.1|BQ904353 Ta04_03a02_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_03a02, mRNA
sequence
Length = 275
Score = 202 bits (102), Expect = 2e-050
Identities = 183/210 (87%)
Strand = Plus / Minus
Query: 206 atttgagaaagggataatgcactatgggtgtccacattatagaaggagatgccgcataag 265
||||||||| || ||||||| ||||| ||| | ||||| ||||||||||||||||| |
Sbjct: 268 atttgagaagggattaatgcagtatggatgtgcgcattaccgaaggagatgccgcatacg 209
Query: 266 agctccttgctgcaatgaaatttttgattgccgacactgccacaatgaaactaagaattc 325
|||||| ||||||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 208 agctccgtgctgcaatgagatttttgattgccggcactgccacaatgaatcaaagaattc 149
Query: 326 cattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagcaggttgt 385
||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |
Sbjct: 148 gattaaaattgatactgctaggagacatgaacttccacgccatgaactgcagcaggtcat 89
Query: 386 atgctcattgtgtggcactgaacaggaggt 415
|||||||||||||||||||||||| |||||
Sbjct: 88 atgctcattgtgtggcactgaacaagaggt 59
>gb|CA743038.1|CA743038 wri1s.pk002.k13 wri1s Triticum aestivum cDNA clone wri1s.pk002.k13
5' end, mRNA sequence
Length = 260
Score = 202 bits (102), Expect = 2e-050
Identities = 183/210 (87%)
Strand = Plus / Minus
Query: 206 atttgagaaagggataatgcactatgggtgtccacattatagaaggagatgccgcataag 265
||||||||| || ||||||| ||||| ||| | ||||| ||||||||||||||||| |
Sbjct: 231 atttgagaagggattaatgcagtatggatgtgcgcattaccgaaggagatgccgcatacg 172
Query: 266 agctccttgctgcaatgaaatttttgattgccgacactgccacaatgaaactaagaattc 325
|||||| ||||||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 171 agctccgtgctgcaatgagatttttgattgccggcactgccacaatgaatcaaagaattc 112
Query: 326 cattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagcaggttgt 385
||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |
Sbjct: 111 gattaaaattgatactgctaggagacatgaacttccacgccatgaactgcagcaggtcat 52
Query: 386 atgctcattgtgtggcactgaacaggaggt 415
|||||||||||||||||||||||| |||||
Sbjct: 51 atgctcattgtgtggcactgaacaagaggt 22
>gb|DR736779.1|DR736779 FGAS082149 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1091
Score = 190 bits (96), Expect = 8e-047
Identities = 229/272 (84%), Gaps = 1/272 (0%)
Strand = Plus / Plus
Query: 318 aagaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcag 377
|||||||| ||||||||||||| | ||| ||||||||||||||||||||| |||||
Sbjct: 20 aagaattcgattaaaattgatactgctaggagacatgaacttccacgccatgaactgcag 79
Query: 378 caggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatgtatcaattgc 437
||||| ||||||||||||||||||||||||| ||||| | |||| ||| || | |||
Sbjct: 80 caggtcatatgctcattgtgtggcactgaacaagaggtacaacaaacatgcataagttgt 139
Query: 438 ggtgtttgcatggggaagtacttctgtggtttgtgcaaactcttcgacgatgatgtctct 497
||||| |||||||| ||||| ||||||| ||||||| ||||| || |||||||||||
Sbjct: 140 ggtgtatgcatgggaaagtatttctgtgaagtgtgcaagctctttgatgatgatgtctca 199
Query: 498 aaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggcagggagaattcc 557
||| |||||||||||||| | | ||||||||||||||||| || ||||||||||||| |
Sbjct: 200 aaagagcagtatcactgccatgtgtgtggaatatgtagaattggtggcagggagaatttc 259
Query: 558 ttccactgttcaaaa-gtggatgttgctattc 588
|| ||||| |||||| | |||||||| |||||
Sbjct: 260 tttcactgctcaaaatgcggatgttgttattc 291
>gb|BG907657.1|BG907657 TaLr1161G09R TaLr1 Triticum aestivum cDNA clone TaLr1161G09 5',
mRNA sequence
Length = 538
Score = 184 bits (93), Expect = 5e-045
Identities = 201/237 (84%)
Strand = Plus / Plus
Query: 173 gatcaatggttcaaaccctgatgactatgagaaatttgagaaagggataatgcactatgg 232
|||||||||||| | ||||||| ||||| |||||||| || || ||||||| |||||
Sbjct: 302 gatcaatggttccgagtctgatgagtatgaaaaatttgacaagggattaatgcagtatgg 361
Query: 233 gtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttga 292
||| ||||||| ||||||||||||||||| |||| || ||||||||||| ||||||||
Sbjct: 362 atgtgcacattaccgaaggagatgccgcatacgagcaccatgctgcaatgagatttttga 421
Query: 293 ttgccgacactgccacaatgaaactaagaattccattaaaattgataaaatgaagaggca 352
|||||| ||||||||||||||| | |||||||| || |||||||||| | | | ||
Sbjct: 422 ttgccggcactgccacaatgaatcaaagaattcgatcaaaattgatactcctacgcgaca 481
Query: 353 tgaacttccacgccatgaagtgcagcaggttgtatgctcattgtgtggcactgaaca 409
||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 482 tgaacttccacgccatgaactgcagcaggtcatatgcacattgtgtggcactgaaca 538
>gb|CD904575.1|CD904575 G468.001C06F010509 G468 Triticum aestivum cDNA clone G468001C06,
mRNA sequence
Length = 712
Score = 182 bits (92), Expect = 2e-044
Identities = 186/216 (86%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 374 gcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatgtatcaa 433
||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 12 gcagcaggtcatatgcacattgtgtggcactgaacaagaggtacgacaagtatgcatcaa 71
Query: 434 ttgcggtgtttgcatggggaagtacttctgtggtttgtgcaaactcttcgacgatgatgt 493
|| ||||| |||||||| ||||| ||||||| ||||||| ||||| || ||||||||
Sbjct: 72 ctgtggtgtatgcatgggaaagtatttctgtgaagtgtgcaagctctttgatgatgatgt 131
Query: 494 ctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggcagggagaa 553
||| |||||||||||||||||| | | ||||||||||||||||| || |||||||||||
Sbjct: 132 ctcaaaacagcagtatcactgccatgcgtgtggaatatgtagaattggtggcagggagaa 191
Query: 554 ttccttccactgttcaaaa-gtggatgttgctattc 588
|| ||| ||||| |||||| | |||||||| |||||
Sbjct: 192 tttctttcactgctcaaaatgcggatgttgttattc 227
>gb|CV782258.1|CV782258 FGAS076671 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 182 bits (92), Expect = 2e-044
Identities = 186/216 (86%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 374 gcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatgtatcaa 433
||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 89 gcagcaggtcatatgcacattgtgtggcactgaacaagaggtacgacaagtatgcatcaa 148
Query: 434 ttgcggtgtttgcatggggaagtacttctgtggtttgtgcaaactcttcgacgatgatgt 493
|| ||||| |||||||| ||||| ||||||| ||||||| ||||| || ||||||||
Sbjct: 149 ctgtggtgtatgcatgggaaagtatttctgtgaagtgtgcaagctctttgatgatgatgt 208
Query: 494 ctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggcagggagaa 553
||| |||||||||||||||||| | | ||||||||||||||||| || |||||||||||
Sbjct: 209 ctcaaaacagcagtatcactgccatgcgtgtggaatatgtagaattggtggcagggagaa 268
Query: 554 ttccttccactgttcaaaa-gtggatgttgctattc 588
|| ||| ||||| |||||| | |||||||| |||||
Sbjct: 269 tttctttcactgctcaaaatgcggatgttgttattc 304
>gb|CV780638.1|CV780638 FGAS075049 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 882
Score = 143 bits (72), Expect = 2e-032
Identities = 160/188 (85%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 402 actgaacaggaggtgcgacaagtatgtatcaattgcggtgtttgcatggggaagtacttc 461
|||||||| |||| ||||||||||| ||||| || ||||| |||||||| ||||| |||
Sbjct: 90 actgaacaagaggcacgacaagtatgcatcaactgtggtgtatgcatgggaaagtatttc 149
Query: 462 tgtggtttgtgcaaactcttcgacgatgatgtctctaaacagcagtatcactgcaacgga 521
|||| ||||||| ||||| || ||||||||||| |||||||||||||||||| | |
Sbjct: 150 tgtgaagtgtgcaagctctttgatgatgatgtctcaaaacagcagtatcactgccatgcg 209
Query: 522 tgtggaatatgtagaatcggaggcagggagaattccttccactgttcaaaa-gtggatgt 580
||||||||||||||||| || ||||||||||||| ||| ||||| |||||| | ||||||
Sbjct: 210 tgtggaatatgtagaattggtggcagggagaatttctttcactgctcaaaatgcggatgt 269
Query: 581 tgctattc 588
|| |||||
Sbjct: 270 tgttattc 277
>gb|CV774521.1|CV774521 FGAS068920 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 866
Score = 127 bits (64), Expect = 9e-028
Identities = 141/167 (84%)
Strand = Plus / Plus
Query: 173 gatcaatggttcaaaccctgatgactatgagaaatttgagaaagggataatgcactatgg 232
|||||||||||| | ||||||| ||||| |||||||| || || ||||||| |||||
Sbjct: 509 gatcaatggttccgagtctgatgagtatganaaatttgacaagggattaatgcagtatgg 568
Query: 233 gtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttga 292
||| ||||||| ||||||||||||||||| |||| || ||||||||||| ||||||||
Sbjct: 569 atgtgcacattaccgaaggagatgccgcatacgagcaccatgctgcaatgagatttttga 628
Query: 293 ttgccgacactgccacaatgaaactaagaattccattaaaattgata 339
||| || ||||||||||||||| | |||||||| || |||||||||
Sbjct: 629 ttggcggcactgccacaatgaatcaaagaattcgatccaaattgata 675
>gb|BJ248187.1|BJ248187 BJ248187 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf5e04 5', mRNA sequence
Length = 598
Score = 105 bits (53), Expect = 3e-021
Identities = 105/121 (86%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 469 tgtgcaaactcttcgacgatgatgtctctaaacagcagtatcactgcaacggatgtggaa 528
||||||| ||||| || ||||||||||| |||||||||||||||||| | | |||||||
Sbjct: 17 tgtgcaagctctttgatgatgatgtctcaaaacagcagtatcactgccatgcgtgtggaa 76
Query: 529 tatgtagaatcggaggcagggagaattccttccactgttcaaaa-gtggatgttgctatt 587
|||||||||| || ||||||||||||| ||| ||||| |||||| | |||||||| ||||
Sbjct: 77 tatgtagaattggtggcagggagaatttctttcactgctcaaaatgcggatgttgttatt 136
Query: 588 c 588
|
Sbjct: 137 c 137
>gb|BQ802999.1|BQ802999 WHE2832_E09_J18ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2832_E09_J18, mRNA
sequence
Length = 799
Score = 103 bits (52), Expect = 1e-020
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 486 gatgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggc 545
||||||||||| |||||||||||||||||| | | ||||||||||| ||||| || |||
Sbjct: 23 gatgatgtctcaaaacagcagtatcactgccatgcgtgtggaatatgcagaattggtggc 82
Query: 546 agggagaattccttccactgttcaaaa-gtggatgttgctattc 588
|||||||||| ||||||||| |||||| |||||||||| |||||
Sbjct: 83 agggagaatttcttccactgctcaaaatgtggatgttgttattc 126
>gb|CA743138.1|CA743138 wri1s.pk002.d18 wri1s Triticum aestivum cDNA clone wri1s.pk002.d18
5' end, mRNA sequence
Length = 260
Score = 101 bits (51), Expect = 5e-020
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 286 tttttgattgccgacactgccacaatgaaactaagaattccattaaaattgataaaatga 345
||||||||||||| |||| |||||| | |||||||| |||||||||||| |
Sbjct: 110 tttttgattgccggcactnnnnnaatgaatcaaagaattcnnttaaaattgatactcttn 169
Query: 346 agaggcatgaacttccacgccatgaagtgcagcaggttgtatgctcattgtgtggcactg 405
| | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 170 ngcgacatgaacttccacgccatgaactgcagcaggtcatatgctcattgtgtggcactg 229
Query: 406 aacaggaggt 415
|||| |||||
Sbjct: 230 aacaagaggt 239
>gb|BE497128.1|BE497128 WHE0764_F02_K04ZS Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0764_F02_K04, mRNA
sequence
Length = 536
Score = 99.6 bits (50), Expect = 2e-019
Identities = 120/142 (84%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 448 tggggaagtacttctgtggtttgtgcaaactcttcgacgatgatgtctctaaacagcagt 507
|||| ||||| ||||||| ||||||| ||||| || ||||||||||| ||| ||||||
Sbjct: 18 tgggaaagtatttctgtgaagtgtgcaagctctttgatgatgatgtctcaaaagagcagt 77
Query: 508 atcactgcaacggatgtggaatatgtagaatcggaggcagggagaattccttccactgtt 567
|||||||| | | ||||||||||||||||| || ||||||||||||| ||| ||||| |
Sbjct: 78 atcactgccatgtgtgtggaatatgtagaattggtggcagggagaatttctttcactgct 137
Query: 568 caaaa-gtggatgttgctattc 588
||||| | |||||||| |||||
Sbjct: 138 caaaatgcggatgttgttattc 159
>gb|CD913931.1|CD913931 G550.119N09F010712 G550 Triticum aestivum cDNA clone G550119N09,
mRNA sequence
Length = 498
Score = 91.7 bits (46), Expect = 5e-017
Identities = 86/98 (87%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 492 gtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggcagggag 551
||||| |||||||||||||||||| | | ||||||||||| ||||| || |||||||||
Sbjct: 12 gtctcaaaacagcagtatcactgccatgcgtgtggaatatgcagaattggtggcagggag 71
Query: 552 aattccttccactgttcaaaa-gtggatgttgctattc 588
|||| ||||||||| |||||| |||||||||| |||||
Sbjct: 72 aatttcttccactgctcaaaatgtggatgttgttattc 109
>gb|BM140450.1|BM140450 WHE0483_g11_m21zS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0483_g11_m21,
mRNA sequence
Length = 340
Score = 48.1 bits (24), Expect = 7e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 251 gagatgccgcataagagctccttgctgcaatg 282
||||||||||||| |||| |||||||||||||
Sbjct: 309 gagatgccgcatacgagcaccttgctgcaatg 340
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 108,095
Number of Sequences: 636343
Number of extensions: 108095
Number of successful extensions: 29949
Number of sequences better than 0.5: 21
Number of HSP's better than 0.5 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29911
Number of HSP's gapped (non-prelim): 37
length of query: 602
length of database: 367,240,239
effective HSP length: 19
effective length of query: 583
effective length of database: 355,149,722
effective search space: 207052287926
effective search space used: 207052287926
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)