BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198833.2.1
(593 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ243936.1|BJ243936 BJ243936 Y. Ogihara unpublished cDNA... 757 0.0
gb|BJ245820.1|BJ245820 BJ245820 Y. Ogihara unpublished cDNA... 611 e-173
gb|BJ250225.1|BJ250225 BJ250225 Y. Ogihara unpublished cDNA... 525 e-147
gb|BJ285920.1|BJ285920 BJ285920 Y. Ogihara unpublished cDNA... 486 e-136
gb|BJ251714.1|BJ251714 BJ251714 Y. Ogihara unpublished cDNA... 452 e-125
gb|BJ251252.1|BJ251252 BJ251252 Y. Ogihara unpublished cDNA... 414 e-114
gb|BJ244140.1|BJ244140 BJ244140 Y. Ogihara unpublished cDNA... 367 e-100
gb|BJ249930.1|BJ249930 BJ249930 Y. Ogihara unpublished cDNA... 367 e-100
gb|BJ251281.1|BJ251281 BJ251281 Y. Ogihara unpublished cDNA... 361 4e-098
gb|BJ255470.1|BJ255470 BJ255470 Y. Ogihara unpublished cDNA... 155 4e-036
gb|CA593973.1|CA593973 wpa1c.pk004.c19 wpa1c Triticum aesti... 121 6e-026
gb|BJ248171.1|BJ248171 BJ248171 Y. Ogihara unpublished cDNA... 109 2e-022
gb|BJ248423.1|BJ248423 BJ248423 Y. Ogihara unpublished cDNA... 103 1e-020
emb|AX660733.1| Sequence 1090 from Patent WO03000906 84 1e-014
gb|BE606718.1|BE606718 WHE0907_G06_N11ZS Wheat 5-15 DAP spi... 82 5e-014
gb|AL808409.1|AL808409 AL808409 a:22 Triticum aestivum cDNA... 82 5e-014
gb|BJ254306.1|BJ254306 BJ254306 Y. Ogihara unpublished cDNA... 80 2e-013
gb|BJ254574.1|BJ254574 BJ254574 Y. Ogihara unpublished cDNA... 80 2e-013
gb|BJ252439.1|BJ252439 BJ252439 Y. Ogihara unpublished cDNA... 78 8e-013
gb|BE425995.1|BE425995 WHE0326_A09_A18ZS Wheat unstressed s... 74 1e-011
gb|BJ250042.1|BJ250042 BJ250042 Y. Ogihara unpublished cDNA... 74 1e-011
gb|CA628044.1|CA628044 wle1.pk0001.d7 wle1 Triticum aestivu... 74 1e-011
gb|BJ250058.1|BJ250058 BJ250058 Y. Ogihara unpublished cDNA... 64 1e-008
gb|CA599582.1|CA599582 waw1c.pk003.e20 waw1c Triticum aesti... 60 2e-007
gb|CK162455.1|CK162455 FGAS015049 Triticum aestivum FGAS: L... 60 2e-007
gb|CK210460.1|CK210460 FGAS022276 Triticum aestivum FGAS: L... 52 4e-005
gb|AL822121.1|AL822121 AL822121 p:234 Triticum aestivum cDN... 50 2e-004
gb|BQ806129.1|BQ806129 WHE3575_B07_C13ZS Wheat developing g... 48 7e-004
gb|CA604573.1|CA604573 wr1.pk0041.c12 wr1 Triticum aestivum... 48 7e-004
gb|CA633567.1|CA633567 wle1n.pk0075.h10 wle1n Triticum aest... 48 7e-004
gb|AL808414.1|AL808414 AL808414 a:22 Triticum aestivum cDNA... 48 7e-004
gb|BE442559.1|BE442559 WHE1103_D06_H11ZS Wheat etiolated se... 46 0.003
gb|CA721383.1|CA721383 wdk9n.pk001.p9 wdk9n Triticum aestiv... 46 0.003
gb|CD452428.1|CD452428 WHE1103_D06_H11ZT CS wheat etiolated... 46 0.003
gb|CD878081.1|CD878081 AZO4.101N22R011122 AZO4 Triticum aes... 46 0.003
gb|BQ241205.1|BQ241205 TaE05008A05R TaE05 Triticum aestivum... 44 0.011
gb|CD868793.1|CD868793 AZO2.109N19F001114 AZO2 Triticum aes... 44 0.011
gb|CB307163.1|CB307163 HFIG148 Hessian fly infested cDNA li... 44 0.011
emb|AX660696.1| Sequence 1053 from Patent WO03000906 44 0.011
gb|CA655402.1|CA655402 wlm0.pk0011.f11 wlm0 Triticum aestiv... 42 0.043
gb|CA684434.1|CA684434 wlm96.pk025.f22 wlm96 Triticum aesti... 42 0.043
gb|CA741864.1|CA741864 wia1c.pk002.g1 wia1c Triticum aestiv... 42 0.043
gb|CV760706.1|CV760706 FGAS055092 Triticum aestivum FGAS: L... 42 0.043
gb|CA700589.1|CA700589 wkm1c.pk005.d22 wkm1c Triticum aesti... 40 0.17
>gb|BJ243936.1|BJ243936 BJ243936 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13h13 5', mRNA sequence
Length = 582
Score = 757 bits (382), Expect = 0.0
Identities = 502/542 (92%)
Strand = Plus / Plus
Query: 1 atgggcttccacaacacggccggcgcggagaggcaccaggcggtggcgctccgcgttcag 60
||||| |||||||||||||| |||||||||| |||||||||||||||||| || || |||
Sbjct: 41 atggggttccacaacacggctggcgcggagaagcaccaggcggtggcgctgcgggtgcag 100
Query: 61 ggagacctcgcggcgttctacaactgccggttcgacgcgttccaggacacgctgtacgtg 120
|| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ggcgacctctcggcgttcttcaactgccggttcgacgcgttccaggacacgctgtacgtg 160
Query: 121 cacgcccggcgccagttcttccgcaactgcgtcatctccggcaccattgacttcatcttc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 161 cacgcccggcgccagttcttccgcaactgcgtcatctccggcaccatcgacttcatcttc 220
Query: 181 ggcaactcggcggcggtgttccagaactgcctcatcgtcacgcggcggcccatggacaac 240
||||||||||| || |||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 221 ggcaactcggccgccgtgttccagaactgtctcatcatcacgcgccggcccatggacaac 280
Query: 241 cagcagaactcggtgaccgcgcacggccgcacggaccccaacatgaagtcggggctcgtc 300
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 281 cagcagaactcggtgactgcgcacggccgcacggaccccaacatgaagtccgggctggtg 340
Query: 301 atccagaactgccgcctggtgcccgaccagaagctcttccccgaccgcttcaagatcccc 360
||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||
Sbjct: 341 atccagaactgccgcctggtgccggaccagaagctgttcgcggaccgcttcaagatcccg 400
Query: 361 tcgtacctgggccgaccctggaaggagttctcgcgcctcgtcatcatggagagcaccatc 420
|| ||||||||| | || ||||||||||||||||| || |||||||||||||||| |||
Sbjct: 401 tcctacctgggcaggccgtggaaggagttctcgcggctggtcatcatggagagcatgatc 460
Query: 421 gccgacttcatcaagcccgagggctacatgccctggaacggcgacttcggcatcaagacg 480
||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 461 gccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgcgctcaagacg 520
Query: 481 ctctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaagagggtcacc 540
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagggtcacc 580
Query: 541 tg 542
||
Sbjct: 581 tg 582
>gb|BJ245820.1|BJ245820 BJ245820 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf20e17 5', mRNA sequence
Length = 665
Score = 611 bits (308), Expect = e-173
Identities = 404/436 (92%)
Strand = Plus / Plus
Query: 1 atgggcttccacaacacggccggcgcggagaggcaccaggcggtggcgctccgcgttcag 60
||||| |||||||||||||| |||||||||| |||||||||||||||||| || || |||
Sbjct: 230 atggggttccacaacacggctggcgcggagaagcaccaggcggtggcgctgcgggtgcag 289
Query: 61 ggagacctcgcggcgttctacaactgccggttcgacgcgttccaggacacgctgtacgtg 120
|| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggcgacctctcggcgttcttcaactgccggttcgacgcgttccaggacacgctgtacgtg 349
Query: 121 cacgcccggcgccagttcttccgcaactgcgtcatctccggcaccattgacttcatcttc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 350 cacgcccggcgccagttcttccgcaactgcgtcatctccggcaccatcgacttcatcttc 409
Query: 181 ggcaactcggcggcggtgttccagaactgcctcatcgtcacgcggcggcccatggacaac 240
||||||||||| || |||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 410 ggcaactcggccgccgtgttccagaactgtctcatcatcacgcgccggcccatggacaac 469
Query: 241 cagcagaactcggtgaccgcgcacggccgcacggaccccaacatgaagtcggggctcgtc 300
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 470 cagcagaactcggtgactgcgcacggccgcacggaccccaacatgaagtccgggctggtg 529
Query: 301 atccagaactgccgcctggtgcccgaccagaagctcttccccgaccgcttcaagatcccc 360
||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||
Sbjct: 530 atccagaactgccgcctggtgccggaccagaagctgttcgcggaccgcttcaagatcccg 589
Query: 361 tcgtacctgggccgaccctggaaggagttctcgcgcctcgtcatcatggagagcaccatc 420
|| ||||||||| | || ||||||||||||||||| || |||||||||||||||| |||
Sbjct: 590 tcctacctgggcaggccgtggaaggagttctcgcggctggtcatcatggagagcatgatc 649
Query: 421 gccgacttcatcaagc 436
||||||||||||||||
Sbjct: 650 gccgacttcatcaagc 665
>gb|BJ250225.1|BJ250225 BJ250225 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9k15 3', mRNA sequence
Length = 701
Score = 525 bits (265), Expect = e-147
Identities = 360/392 (91%)
Strand = Plus / Minus
Query: 199 ttccagaactgcctcatcgtcacgcggcggcccatggacaaccagcagaactcggtgacc 258
|||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 700 ttccagaactgcntcatcatcacgcgccggcccatggacaaccagcagaactcggtgacc 641
Query: 259 gcgcacggccgcacggaccccaacatgaagtcggggctcgtcatccagaactgccgcctg 318
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 640 gcgcacggccgcacggaccccaacatgaagtccgggctggtcatccagaactgccgcctg 581
Query: 319 gtgcccgaccagaagctcttccccgaccgcttcaagatcccctcgtacctgggccgaccc 378
||||| ||||||||||| ||| | ||||||||||||||||| || | ||||||||| ||
Sbjct: 580 gtgccggaccagaagctgttcgcggaccgcttcaagatcccgtccttcctgggccggccg 521
Query: 379 tggaaggagttctcgcgcctcgtcatcatggagagcaccatcgccgacttcatcaagccc 438
||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||
Sbjct: 520 tggaaggagttctcgcggctggtcatcatggagagcatgatcgccgacttcatcaagccc 461
Query: 439 gagggctacatgccctggaacggcgacttcggcatcaagacgctctactacgccgagtac 498
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 460 gaggggtacatgccgtggaacggcgacttcgggctcaagacgctctactacgccgagttc 401
Query: 499 aacaaccgcggccccggcgccggcaccagcaagagggtcacctggcctgggttccacgtc 558
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 400 ggcaaccgcggccccggcgccggcaccagcaagagggtcacctggccagggttccgcgtc 341
Query: 559 atcggccggaaggacgccgagcagttcaccgc 590
||||| ||||| |||||||||||||||||
Sbjct: 340 atcgggaacaaggaggccgagcagttcaccgc 309
>gb|BJ285920.1|BJ285920 BJ285920 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13h13 3', mRNA sequence
Length = 697
Score = 486 bits (245), Expect = e-136
Identities = 357/393 (90%), Gaps = 1/393 (0%)
Strand = Plus / Minus
Query: 199 ttccagaactgcctcatcgtcacgcggcggcccatggacaaccagcagaactcggtgacc 258
||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 697 ttccagaactgtctcatcatcacgcgccggcccatggacaaccagcagaactcggtgact 638
Query: 259 gcgcacggccgcacggacccc-aacatgaagtcggggctcgtcatccagaactgccgcct 317
||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||||
Sbjct: 637 gcgcacggccgcacggacccccaacatgaagtccgggctggtgatccagaactgccgcct 578
Query: 318 ggtgcccgaccagaagctcttccccgaccgcttcaagatcccctcgtacctgggccgacc 377
|||||| ||||||||||| ||| | ||||||||||||||||| || ||||||||| | ||
Sbjct: 577 ggtgccggaccagaagctgttcgcggaccgcttcaagatcccgtcctacctgggcaggcc 518
Query: 378 ctggaaggagttctcgcgcctcgtcatcatggagagcaccatcgccgacttcatcaagcc 437
||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||
Sbjct: 517 gtggaaggagttctcgcggctggtcatcatggagagcatgatcgccgacttcatcaagcc 458
Query: 438 cgagggctacatgccctggaacggcgacttcggcatcaagacgctctactacgccgagta 497
|||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 457 cgaggggtacatgccgtggaacggcgacttcgcgctcaagacgctctactacgccgagtt 398
Query: 498 caacaaccgcggccccggcgccggcaccagcaagagggtcacctggcctgggttccacgt 557
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 397 cggcaaccgcggccccggcgccggcaccagcaagagggtcacctggccagggttccgcgt 338
Query: 558 catcggccggaaggacgccgagcagttcaccgc 590
|||||| ||||| |||||||||||||||||
Sbjct: 337 catcgggaacaaggaggccgagcagttcaccgc 305
>gb|BJ251714.1|BJ251714 BJ251714 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf20e17 3', mRNA sequence
Length = 632
Score = 452 bits (228), Expect = e-125
Identities = 324/356 (91%)
Strand = Plus / Minus
Query: 235 gacaaccagcagaactcggtgaccgcgcacggccgcacggaccccaacatgaagtcgggg 294
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 632 gacaaccagcagaactcggtgactgcgcacggccgcacggaccccaacatgaagtccggg 573
Query: 295 ctcgtcatccagaactgccgcctggtgcccgaccagaagctcttccccgaccgcttcaag 354
|| || ||||||||||||||||||||||| ||||||||||| ||| | ||||||||||||
Sbjct: 572 ctggtgatccagaactgccgcctggtgccggaccagaagctgttcgcggaccgcttcaag 513
Query: 355 atcccctcgtacctgggccgaccctggaaggagttctcgcgcctcgtcatcatggagagc 414
||||| || ||||||||| | || ||||||||||||||||| || |||||||||||||||
Sbjct: 512 atcccgtcctacctgggcaggccgtggaaggagttctcgcggctggtcatcatggagagc 453
Query: 415 accatcgccgacttcatcaagcccgagggctacatgccctggaacggcgacttcggcatc 474
| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||
Sbjct: 452 atgatcgccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgcgctc 393
Query: 475 aagacgctctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaagagg 534
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 392 aagacgctctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagg 333
Query: 535 gtcacctggcctgggttccacgtcatcggccggaaggacgccgagcagttcaccgc 590
||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 332 gtcacctggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgc 277
>gb|BJ251252.1|BJ251252 BJ251252 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19e14 3', mRNA sequence
Length = 613
Score = 414 bits (209), Expect = e-114
Identities = 314/348 (90%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 244 cagaactcggtgaccgcgcacggccgcacgg-accccaacatgaagtcggggctcgtcat 302
|||||||||||||| | |||||||||||||| |||||||||||||||| ||||| || ||
Sbjct: 613 cagaactcggtgactgngcacggccgcacgggaccccaacatgaagtccgggctggtgat 554
Query: 303 ccagaactgccgcctggtgcccgaccagaagctcttccccgaccgcttcaagatcccctc 362
||||||||||||||||||||| ||||||||||| ||| | ||||||||||||||||| ||
Sbjct: 553 ccagaactgccgcctggtgccggaccagaagctgttcgcggaccgcttcaagatcccgtc 494
Query: 363 gtacctgggccgaccctggaaggagttctcgcgcctcgtcatcatggagagcaccatcgc 422
||||||||| | || ||||||||||||||||| || |||||||||||||||| |||||
Sbjct: 493 ctacctgggcaggccgtggaaggagttctcgcggctggtcatcatggagagcatgatcgc 434
Query: 423 cgacttcatcaagcccgagggctacatgccctggaacggcgacttcggcatcaagacgct 482
||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||
Sbjct: 433 cgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgcgctcaagacgct 374
Query: 483 ctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaagagggtcacctg 542
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagggtcacctg 314
Query: 543 gcctgggttccacgtcatcggccggaaggacgccgagcagttcaccgc 590
||| ||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 313 gccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgc 266
>gb|BJ244140.1|BJ244140 BJ244140 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14g15 5', mRNA sequence
Length = 591
Score = 367 bits (185), Expect = e-100
Identities = 263/289 (91%)
Strand = Plus / Plus
Query: 302 tccagaactgccgcctggtgcccgaccagaagctcttccccgaccgcttcaagatcccct 361
|||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||| |
Sbjct: 274 tccagaactgccgcctggtgccggaccagaagctcttcgcggaccgcctcaagatcccgt 333
Query: 362 cgtacctgggccgaccctggaaggagttctcgcgcctcgtcatcatggagagcaccatcg 421
| ||||||||||| || ||||||||||||||||| || |||||||||||||||| ||||
Sbjct: 334 cctacctgggccggccgtggaaggagttctcgcggctggtcatcatggagagcatgatcg 393
Query: 422 ccgacttcatcaagcccgagggctacatgccctggaacggcgacttcggcatcaagacgc 481
|||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 394 ccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgggctcaagacgc 453
Query: 482 tctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaagagggtcacct 541
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagggtcacct 513
Query: 542 ggcctgggttccacgtcatcggccggaaggacgccgagcagttcaccgc 590
|||| ||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 514 ggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgc 562
Score = 315 bits (159), Expect = 2e-084
Identities = 198/211 (93%)
Strand = Plus / Plus
Query: 1 atgggcttccacaacacggccggcgcggagaggcaccaggcggtggcgctccgcgttcag 60
||||| ||||||||||||||||||||||||| |||||||||||||||||| | || |||
Sbjct: 75 atggggttccacaacacggccggcgcggagaagcaccaggcggtggcgctgagggtgcag 134
Query: 61 ggagacctcgcggcgttctacaactgccggttcgacgcgttccaggacacgctgtacgtg 120
|| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 135 ggcgacctctcggcgttcttcaactgccggttcgacgcgttccaggacacgctgtatgtg 194
Query: 121 cacgcccggcgccagttcttccgcaactgcgtcatctccggcaccattgacttcatcttc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 195 cacgcccggcgccagttcttccgcaactgcgtcatctccggcaccatcgacttcatcttc 254
Query: 181 ggcaactcggcggcggtgttccagaactgcc 211
||||||||||| || ||||||||||||||||
Sbjct: 255 ggcaactcggccgccgtgttccagaactgcc 285
>gb|BJ249930.1|BJ249930 BJ249930 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14g15 3', mRNA sequence
Length = 712
Score = 367 bits (185), Expect = e-100
Identities = 263/289 (91%)
Strand = Plus / Minus
Query: 302 tccagaactgccgcctggtgcccgaccagaagctcttccccgaccgcttcaagatcccct 361
|||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||| |
Sbjct: 586 tccagaactgccgcctggtgccggaccagaagctcttcgcggaccgcctcaagatcccgt 527
Query: 362 cgtacctgggccgaccctggaaggagttctcgcgcctcgtcatcatggagagcaccatcg 421
| ||||||||||| || ||||||||||||||||| || |||||||||||||||| ||||
Sbjct: 526 cctacctgggccggccgtggaaggagttctcgcggctggtcatcatggagagcatgatcg 467
Query: 422 ccgacttcatcaagcccgagggctacatgccctggaacggcgacttcggcatcaagacgc 481
|||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 466 ccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgggctcaagacgc 407
Query: 482 tctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaagagggtcacct 541
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaagagggtcacct 347
Query: 542 ggcctgggttccacgtcatcggccggaaggacgccgagcagttcaccgc 590
|||| ||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 346 ggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgc 298
Score = 202 bits (102), Expect = 2e-050
Identities = 131/138 (94%), Gaps = 2/138 (1%)
Strand = Plus / Minus
Query: 76 ttctacaactgccggttcgacgcgtt-ccaggacacgctgtacgtgcacgcccggcgcca 134
|||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 712 ttcttcaactgccggttcgacgcgttnccaggacacgctgtatgtgcacgcccggcgcca 653
Query: 135 gttcttccgcaactgcgtcatctccggcaccattgacttcatcttcggcaactc-ggcgg 193
||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
Sbjct: 652 gttcttccgcaactgcgtcatctccggcaccatcgacttcatcttcggcaactcgggccg 593
Query: 194 cggtgttccagaactgcc 211
| ||||||||||||||||
Sbjct: 592 ccgtgttccagaactgcc 575
>gb|BJ251281.1|BJ251281 BJ251281 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19g21 3', mRNA sequence
Length = 576
Score = 361 bits (182), Expect = 4e-098
Identities = 269/298 (90%)
Strand = Plus / Minus
Query: 293 ggctcgtcatccagaactgccgcctggtgcccgaccagaagctcttccccgaccgcttca 352
|||| |||||||||||||||||||||||||| ||||||||||| ||| | ||||||||||
Sbjct: 576 ggctggtcatccagaactgccgcctggtgccggaccagaagctgttcgcggaccgcttca 517
Query: 353 agatcccctcgtacctgggccgaccctggaaggagttctcgcgcctcgtcatcatggaga 412
||||||| || | ||||||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 516 agatcccgtccttcctgggccggccgtggaaggagttctcgcggctggtcatcatggaga 457
Query: 413 gcaccatcgccgacttcatcaagcccgagggctacatgccctggaacggcgacttcggca 472
||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 456 gcatgatcgccgacttcatcaagcccgaggggtacatgccgtggaacggcgacttcgggc 397
Query: 473 tcaagacgctctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaaga 532
|||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 396 tcaagacgctctactacgccgagttcggcaaccacggccccggcgccggcaccagcaaga 337
Query: 533 gggtcacctggcctgggttccacgtcatcggccggaaggacgccgagcagttcaccgc 590
||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 336 gggtcacctggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgc 279
>gb|BJ255470.1|BJ255470 BJ255470 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23o10 3', mRNA sequence
Length = 440
Score = 155 bits (78), Expect = 4e-036
Identities = 108/118 (91%)
Strand = Plus / Minus
Query: 473 tcaagacgctctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaaga 532
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 435 tcaagacgctctactacgccgagttcggcaaccgcggccccggcgccggcaccagcaaga 376
Query: 533 gggtcacctggcctgggttccacgtcatcggccggaaggacgccgagcagttcaccgc 590
||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 375 gggtcacctggccagggttccgcgtcatcgggaacaaggaggccgagcagttcaccgc 318
>gb|CA593973.1|CA593973 wpa1c.pk004.c19 wpa1c Triticum aestivum cDNA clone wpa1c.pk004.c19
5' end, mRNA sequence
Length = 534
Score = 121 bits (61), Expect = 6e-026
Identities = 116/133 (87%), Gaps = 1/133 (0%)
Strand = Plus / Plus
Query: 84 ctgccggttcgacgcgttccaggacacgctgtacgtgcacgcccggcgccagttcttccg 143
|||| ||||||| | || ||||||||| ||||||||||||||| || |||||||||||
Sbjct: 51 ctgcaggttcgaggggtaccaggacaccctgtacgtgcacgccaaccggcagttcttccg 110
Query: 144 caactgcgtcatctccggcaccattgacttcatcttcggcaactcggcggcggtgttcc- 202
|||||||| | | |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 111 caactgcgaggtgttgggcaccatcgacttcatcttcggcaactcggcggcggtgttcca 170
Query: 203 agaactgcctcat 215
|||||||||||||
Sbjct: 171 agaactgcctcat 183
Score = 60.0 bits (30), Expect = 2e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 252 ggtgaccgcgcacggccgcacggaccccaacatg 285
||||||||||||||| ||||||||||||||||||
Sbjct: 220 ggtgaccgcgcacgggcgcacggaccccaacatg 253
Score = 46.1 bits (23), Expect = 0.003
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 403 atcatggagagcaccatcgccgacttcatcaagcccga 440
|||||||||| |||||||| ||| |||||||||||||
Sbjct: 372 atcatggagaacaccatcggcganctcatcaagcccga 409
>gb|BJ248171.1|BJ248171 BJ248171 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf5d01 5', mRNA sequence
Length = 254
Score = 109 bits (55), Expect = 2e-022
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 133 cagttcttccgcaactgcgtcatctccggcaccattgacttcatcttcggcaactcggcg 192
||||||||||||||||||| | | |||||||| ||||||||||||||||||||||||
Sbjct: 14 cagttcttccgcaactgcgaggtgttgggcaccatcgacttcatcttcggcaactcggcg 73
Query: 193 gcggtgttccagaactgcctcat 215
|||||||||||||||||||||||
Sbjct: 74 gcggtgttccagaactgcctcat 96
Score = 60.0 bits (30), Expect = 2e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 252 ggtgaccgcgcacggccgcacggaccccaacatg 285
||||||||||||||| ||||||||||||||||||
Sbjct: 133 ggtgaccgcgcacgggcgcacggaccccaacatg 166
>gb|BJ248423.1|BJ248423 BJ248423 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf6d01 5', mRNA sequence
Length = 276
Score = 103 bits (52), Expect = 1e-020
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 160 ggcaccattgacttcatcttcggcaactcggcggcggtgttccagaactgcctcat 215
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ggcaccatcgacttcatcttcggcaactcggcggcggtgttccagaactgcctcat 62
Score = 60.0 bits (30), Expect = 2e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 252 ggtgaccgcgcacggccgcacggaccccaacatg 285
||||||||||||||| ||||||||||||||||||
Sbjct: 99 ggtgaccgcgcacgggcgcacggaccccaacatg 132
Score = 40.1 bits (20), Expect = 0.17
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 403 atcatggagagcaccatcgccgac 426
||||||||||||||||||| ||||
Sbjct: 250 atcatggagagcaccatcggcgac 273
>emb|AX660733.1| Sequence 1090 from Patent WO03000906
Length = 712
Score = 83.8 bits (42), Expect = 1e-014
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 473 tcaagacgctctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaaga 532
|||||||||||||||||||||||||| |||| ||| ||||||||||| || |||||||
Sbjct: 272 tcaagacgctctactacgccgagtacgccaacaccgggcccggcgccgggacaagcaaga 331
Query: 533 gggtcacctggcctgggt 550
|||| |||||||| ||||
Sbjct: 332 gggtgacctggccggggt 349
Score = 63.9 bits (32), Expect = 1e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 404 tcatggagagcaccatcgccgacttcatcaagcccgaggg 443
|||||||||||||||||| |||| ||||||||||||||||
Sbjct: 203 tcatggagagcaccatcggcgacctcatcaagcccgaggg 242
Score = 54.0 bits (27), Expect = 1e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 255 gaccgcgcacggccgcacggaccccaacatg 285
|||||||||||| ||||||||||||||||||
Sbjct: 54 gaccgcgcacgggcgcacggaccccaacatg 84
>gb|BE606718.1|BE606718 WHE0907_G06_N11ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0907_G06_N11, mRNA sequence
Length = 479
Score = 81.8 bits (41), Expect = 5e-014
Identities = 143/177 (80%)
Strand = Plus / Plus
Query: 34 caccaggcggtggcgctccgcgttcagggagacctcgcggcgttctacaactgccggttc 93
||||||||||||||||||||||| | |||||| ||||||||||| |||| | |||
Sbjct: 18 caccaggcggtggcgctccgcgtcggcgccgacctctcggcgttctaccgctgcagcttc 77
Query: 94 gacgcgttccaggacacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgtc 153
| | | ||||||||| || ||||||||| | | || |||||||||||| | |||| |
Sbjct: 78 gtgggctaccaggacaccctctacgtgcactcgctccggcagttcttccgcgagtgcgac 137
Query: 154 atctccggcaccattgacttcatcttcggcaactcggcggcggtgttccagaactgc 210
|||| ||||||||| |||||| ||||||||||||| || || ||| |||||| ||||
Sbjct: 138 atctacggcaccatcgacttcgtcttcggcaactccgccgccgtgctccagagctgc 194
>gb|AL808409.1|AL808409 AL808409 a:22 Triticum aestivum cDNA clone E04_a22_plate_16, mRNA
sequence
Length = 535
Score = 81.8 bits (41), Expect = 5e-014
Identities = 140/173 (80%)
Strand = Plus / Plus
Query: 33 gcaccaggcggtggcgctccgcgttcagggagacctcgcggcgttctacaactgccggtt 92
|||||||||||||||||||||||| | |||||| ||||||||||| |||| | ||
Sbjct: 361 gcaccaggcggtggcgctccgcgtcggcgccgacctctcggcgttctaccgctgcagctt 420
Query: 93 cgacgcgttccaggacacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgt 152
|| | | ||||||||| || ||||||||| | | || |||||||||||| | ||||
Sbjct: 421 cgtgggctaccaggacaccctctacgtgcactcgctccggcagttcttccgcgagtgcga 480
Query: 153 catctccggcaccattgacttcatcttcggcaactcggcggcggtgttccaga 205
||||| ||||||||| |||||| ||||||||||||| || || ||| ||||||
Sbjct: 481 catctacggcaccatcgacttcgtcttcggcaactccgccgccgtgctccaga 533
>gb|BJ254306.1|BJ254306 BJ254306 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf5d01 3', mRNA sequence
Length = 516
Score = 79.8 bits (40), Expect = 2e-013
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 473 tcaagacgctctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaaga 532
||||||||||||| |||||||||||| |||| ||| ||||||||||| || |||||||
Sbjct: 383 tcaagacgctctantacgccgagtacgccaacaccgggcccggcgccgggacaagcaaga 324
Query: 533 gggtcacctggcctgggttccacgtcatcgg 563
|||| |||||||| |||| || ||||||||
Sbjct: 323 gggtgacctggccggggtaccgtgtcatcgg 293
Score = 65.9 bits (33), Expect = 3e-009
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 403 atcatggagagcaccatcgccgacttcatcaagcccgaggg 443
||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 453 atcatggagagcaccatcggcgacctcatcaagcccgaggg 413
>gb|BJ254574.1|BJ254574 BJ254574 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf6d01 3', mRNA sequence
Length = 644
Score = 79.8 bits (40), Expect = 2e-013
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 473 tcaagacgctctactacgccgagtacaacaaccgcggccccggcgccggcaccagcaaga 532
||||||||||||| |||||||||||| |||| ||| ||||||||||| || |||||||
Sbjct: 374 tcaagacgctctantacgccgagtacgccaacaccgggcccggcgccgggacaagcaaga 315
Query: 533 gggtcacctggcctgggttccacgtcatcgg 563
|||| |||||||| |||| || ||||||||
Sbjct: 314 gggtgacctggccggggtaccgtgtcatcgg 284
Score = 65.9 bits (33), Expect = 3e-009
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 403 atcatggagagcaccatcgccgacttcatcaagcccgaggg 443
||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 444 atcatggagagcaccatcggcgacctcatcaagcccgaggg 404
Score = 60.0 bits (30), Expect = 2e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 252 ggtgaccgcgcacggccgcacggaccccaacatg 285
||||||||||||||| ||||||||||||||||||
Sbjct: 595 ggtgaccgcgcacgggcgcacggaccccaacatg 562
>gb|BJ252439.1|BJ252439 BJ252439 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24f19 3', mRNA sequence
Length = 668
Score = 77.8 bits (39), Expect = 8e-013
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 134 agttcttccgcaactgcgtcatctccggcaccattgacttcatcttcggcaactcggcgg 193
||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| ||
Sbjct: 668 agttcttccgcgactgcaccatcaccggcaccatcgacttcatcttcggcaactcccagg 609
Query: 194 cggtgttccagaactgcctcatcgtcacgcggcggcccatggacaaccagc 244
||| ||||||||||||||||| | |||| |||||||||||| ||||
Sbjct: 608 tggtcatccagaactgcctcatcctgccgcgcaagcccatggacaatcagc 558
Score = 44.1 bits (22), Expect = 0.011
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 454 tggaacggcgacttcggcatcaagacgctctactacgccgag 495
|||||||||||||||| | || |||| |||| ||||||||||
Sbjct: 348 tggaacggcgacttcgccctcgagaccctcttctacgccgag 307
>gb|BE425995.1|BE425995 WHE0326_A09_A18ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0326_A09_A18, mRNA
sequence
Length = 518
Score = 73.8 bits (37), Expect = 1e-011
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 106 gacacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgtcatctccggcacc 165
||||| || ||||||||| ||| || |||||||||||| | |||| ||||| |||||||
Sbjct: 87 gacaccctctacgtgcactccctccgacagttcttccgcgagtgcgacatctacggcacc 146
Query: 166 attgacttcatcttcggcaactcggcggcggtgttccagaactgc 210
|| |||||| ||||||||||||| || || ||| |||||| ||||
Sbjct: 147 atcgacttcgtcttcggcaactccgccgccgtgctccagagctgc 191
Score = 48.1 bits (24), Expect = 7e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 gcaccaggcggtggcgctccgcgt 56
||||||||||||||||||||||||
Sbjct: 14 gcaccaggcggtggcgctccgcgt 37
>gb|BJ250042.1|BJ250042 BJ250042 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14o03 3', mRNA sequence
Length = 706
Score = 73.8 bits (37), Expect = 1e-011
Identities = 91/109 (83%)
Strand = Plus / Minus
Query: 136 ttcttccgcaactgcgtcatctccggcaccattgacttcatcttcggcaactcggcggcg 195
||||||||| ||||| |||| |||||||||| |||||||||||||||||||| || |
Sbjct: 706 ttcttccgcgactgcaccatcaccggcaccatcgacttcatcttcggcaactcccaggtg 647
Query: 196 gtgttccagaactgcctcatcgtcacgcggcggcccatggacaaccagc 244
|| ||||||||||||||||| | |||| |||||||||||| ||||
Sbjct: 646 gtcatccagaactgcctcatcctgccgcgcaagcccatggacaatcagc 598
Score = 44.1 bits (22), Expect = 0.011
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 454 tggaacggcgacttcggcatcaagacgctctactacgccgag 495
|||||||||||||||| | || |||| |||| ||||||||||
Sbjct: 388 tggaacggcgacttcgccctcgagaccctcttctacgccgag 347
>gb|CA628044.1|CA628044 wle1.pk0001.d7 wle1 Triticum aestivum cDNA clone wle1.pk0001.d7 5'
end, mRNA sequence
Length = 535
Score = 73.8 bits (37), Expect = 1e-011
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 106 gacacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgtcatctccggcacc 165
||||| || ||||||||| ||| || |||||||||||| | |||| ||||| |||||||
Sbjct: 175 gacaccctctacgtgcactccctccgacagttcttccgcgagtgcgacatctacggcacc 234
Query: 166 attgacttcatcttcggcaactcggcggcggtgttccagaactgc 210
|| |||||| ||||||||||||| || || ||| |||||| ||||
Sbjct: 235 atcgacttcgtcttcggcaactccgccgccgtgctccagagctgc 279
Score = 48.1 bits (24), Expect = 7e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 gcaccaggcggtggcgctccgcgt 56
||||||||||||||||||||||||
Sbjct: 102 gcaccaggcggtggcgctccgcgt 125
>gb|BJ250058.1|BJ250058 BJ250058 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14p02 3', mRNA sequence
Length = 721
Score = 63.9 bits (32), Expect = 1e-008
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 159 cggcaccattgacttcatcttcggcaactcggcggcggtgttccagaactgc 210
||||||||| |||||||||||||||||| || || ||||||||||||||||
Sbjct: 639 cggcaccatcgacttcatcttcggcaacgcgcaggtggtgttccagaactgc 588
>gb|CA599582.1|CA599582 waw1c.pk003.e20 waw1c Triticum aestivum cDNA clone waw1c.pk003.e20
5' end, mRNA sequence
Length = 648
Score = 60.0 bits (30), Expect = 2e-007
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 102 ccaggacacgctgtacgtgcacgcccggcgccagttct 139
||||||||||||||||||||||||| |||||||||||
Sbjct: 313 ccaggacacgctgtacgtgcacgccatgcgccagttct 350
>gb|CK162455.1|CK162455 FGAS015049 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1082
Score = 60.0 bits (30), Expect = 2e-007
Identities = 84/102 (82%)
Strand = Plus / Minus
Query: 102 ccaggacacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgtcatctccgg 161
||||||||||||||||||||||||| ||||||||||| | | |||| | | ||||
Sbjct: 727 ccaggacacgctgtacgtgcacgccatgcgccagttctacacccgctgccgcgtggccgg 668
Query: 162 caccattgacttcatcttcggcaactcggcggcggtgttcca 203
||| | |||||| ||||||||||||||||||| ||| ||||
Sbjct: 667 cacggtggacttcgtcttcggcaactcggcggccgtgctcca 626
Score = 56.0 bits (28), Expect = 3e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 435 gcccgagggctacatgccctggaacggcgacttcggcatcaagacgctctactacg 490
||||||||| | |||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 370 gcccgaggggtggatgccctggagcggcgacttcgcgctcaagacgctctactacg 315
>gb|CK210460.1|CK210460 FGAS022276 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1102
Score = 52.0 bits (26), Expect = 4e-005
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 102 ccaggacacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgtcatctccgg 161
|||||||||||| |||| |||| | | |||||||||| |||| |||| | | ||| |||
Sbjct: 494 ccaggacacgctctacgcgcactcgctccgccagttctaccgcgactgtgacgtctacgg 553
Query: 162 caccattgacttcatcttcggc 183
||| |||||||||||||||||
Sbjct: 554 cacagttgacttcatcttcggc 575
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 478 acgctctactacgccgagtacaacaaccgcggccc 512
|||||||||||||||||||||| ||||| |||||
Sbjct: 870 acgctctactacgccgagtacatgaaccggggccc 904
>gb|AL822121.1|AL822121 AL822121 p:234 Triticum aestivum cDNA clone
A09_p234_plate_20_run_2, mRNA sequence
Length = 576
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 13 aacacggccggcgcggagaggcaccaggcggtggcgctccg 53
|||||||| ||| ||| || |||||||||||||||||||||
Sbjct: 21 aacacggctggcccggcgaagcaccaggcggtggcgctccg 61
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 478 acgctctactacgccgagtacaacaac 504
||||||||||||||| |||||||||||
Sbjct: 488 acgctctactacgcctagtacaacaac 514
>gb|BQ806129.1|BQ806129 WHE3575_B07_C13ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3575_B07_C13, mRNA sequence
Length = 707
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 153 catctccggcaccattgacttcatcttcggcaactc 188
|||||||||||| | ||||||||||||||||||||
Sbjct: 60 catctccggcacggtggacttcatcttcggcaactc 95
>gb|CA604573.1|CA604573 wr1.pk0041.c12 wr1 Triticum aestivum cDNA clone wr1.pk0041.c12 5'
end, mRNA sequence
Length = 602
Score = 48.1 bits (24), Expect = 7e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 478 acgctctactacgccgagtacaacaaccgcggccccggcgccggcacc 525
||||||||||| ||||||||||||||| ||| || ||||||| ||||
Sbjct: 244 acgctctactatgccgagtacaacaactccgggccgggcgccgacacc 291
>gb|CA633567.1|CA633567 wle1n.pk0075.h10 wle1n Triticum aestivum cDNA clone
wle1n.pk0075.h10 5' end, mRNA sequence
Length = 702
Score = 48.1 bits (24), Expect = 7e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 gcaccaggcggtggcgctccgcgt 56
||||||||||||||||||||||||
Sbjct: 125 gcaccaggcggtggcgctccgcgt 148
Score = 44.1 bits (22), Expect = 0.011
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 106 gacacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgtcatctccggcacc 165
||||| || ||||||||| ||| || |||||||||||| | |||| ||||| |||||||
Sbjct: 198 gacaccctctacgtgcactccctccgacagttcttccgcgagtgcgacatctacggcacc 257
Query: 166 at 167
||
Sbjct: 258 at 259
>gb|AL808414.1|AL808414 AL808414 a:22 Triticum aestivum cDNA clone F02_a22_plate_16, mRNA
sequence
Length = 279
Score = 48.1 bits (24), Expect = 7e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 gcaccaggcggtggcgctccgcgt 56
||||||||||||||||||||||||
Sbjct: 256 gcaccaggcggtggcgctccgcgt 279
>gb|BE442559.1|BE442559 WHE1103_D06_H11ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1103_D06_H11,
mRNA sequence
Length = 347
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 478 acgctctactacgccgagtacaa 500
|||||||||||||||||||||||
Sbjct: 28 acgctctactacgccgagtacaa 50
>gb|CA721383.1|CA721383 wdk9n.pk001.p9 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.p9 5'
end, mRNA sequence
Length = 482
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 478 acgctctactacgccgagtacaacaaccgcggccccggcgccggcac 524
||||||||||||||||||||| | ||| || ||||||||||||||
Sbjct: 190 acgctctactacgccgagtaccagaacacggggcccggcgccggcac 236
>gb|CD452428.1|CD452428 WHE1103_D06_H11ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1103_D06_H11,
mRNA sequence
Length = 357
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 478 acgctctactacgccgagtacaa 500
|||||||||||||||||||||||
Sbjct: 320 acgctctactacgccgagtacaa 298
>gb|CD878081.1|CD878081 AZO4.101N22R011122 AZO4 Triticum aestivum cDNA clone AZO4101N22,
mRNA sequence
Length = 621
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 478 acgctctactacgccgagtacaa 500
|||||||||||||||||||||||
Sbjct: 462 acgctctactacgccgagtacaa 440
>gb|BQ241205.1|BQ241205 TaE05008A05R TaE05 Triticum aestivum cDNA clone TaE05008A05R, mRNA
sequence
Length = 595
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 503 accgcggccccggcgccggcaccagc 528
|||||||| |||||||||||||||||
Sbjct: 100 accgcggcgccggcgccggcaccagc 75
>gb|CD868793.1|CD868793 AZO2.109N19F001114 AZO2 Triticum aestivum cDNA clone AZO2109N19,
mRNA sequence
Length = 677
Score = 44.1 bits (22), Expect = 0.011
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 503 accgcggccccggcgccggcaccagc 528
|||||||| |||||||||||||||||
Sbjct: 158 accgcggcgccggcgccggcaccagc 133
>gb|CB307163.1|CB307163 HFIG148 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 540
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 478 acgctctactacgccgagtaca 499
||||||||||||||||||||||
Sbjct: 510 acgctctactacgccgagtaca 531
Score = 44.1 bits (22), Expect = 0.011
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 102 ccaggacacgctgtacgtgcacgcccggcgccagttcttccgcaactgcgtcatctccgg 161
|||||||||||| |||| |||| | | |||||||||| |||| |||||| | ||| |||
Sbjct: 135 ccaggacacgctctacgcgcactcgctccgccagttctaccgcgactgcgacgtctacgg 194
Query: 162 caccattgacttcatcttcggc 183
|||| | || ||| ||||||||
Sbjct: 195 caccgtcgatttcgtcttcggc 216
>emb|AX660696.1| Sequence 1053 from Patent WO03000906
Length = 573
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 478 acgctctactacgccgagtaca 499
||||||||||||||||||||||
Sbjct: 267 acgctctactacgccgagtaca 288
>gb|CA655402.1|CA655402 wlm0.pk0011.f11 wlm0 Triticum aestivum cDNA clone wlm0.pk0011.f11
5' end, mRNA sequence
Length = 512
Score = 42.1 bits (21), Expect = 0.043
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 25 gcggagaggcaccaggcggtggcgc 49
||||||||| |||||||||||||||
Sbjct: 112 gcggagaggaaccaggcggtggcgc 88
>gb|CA684434.1|CA684434 wlm96.pk025.f22 wlm96 Triticum aestivum cDNA clone wlm96.pk025.f22
5' end, mRNA sequence
Length = 526
Score = 42.1 bits (21), Expect = 0.043
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 25 gcggagaggcaccaggcggtggcgc 49
||||||||| |||||||||||||||
Sbjct: 106 gcggagaggaaccaggcggtggcgc 82
>gb|CA741864.1|CA741864 wia1c.pk002.g1 wia1c Triticum aestivum cDNA clone wia1c.pk002.g1 5'
end, mRNA sequence
Length = 570
Score = 42.1 bits (21), Expect = 0.043
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 25 gcggagaggcaccaggcggtggcgc 49
||||||||| |||||||||||||||
Sbjct: 124 gcggagaggaaccaggcggtggcgc 100
>gb|CV760706.1|CV760706 FGAS055092 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 877
Score = 42.1 bits (21), Expect = 0.043
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 25 gcggagaggcaccaggcggtggcgc 49
||||||||| |||||||||||||||
Sbjct: 246 gcggagaggaaccaggcggtggcgc 222
>gb|CA700589.1|CA700589 wkm1c.pk005.d22 wkm1c Triticum aestivum cDNA clone wkm1c.pk005.d22
5' end, mRNA sequence
Length = 517
Score = 40.1 bits (20), Expect = 0.17
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 33 gcaccaggcggtggcgctccgcgt 56
|||||| |||||||||||||||||
Sbjct: 398 gcaccaagcggtggcgctccgcgt 421
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 174,294
Number of Sequences: 636343
Number of extensions: 174294
Number of successful extensions: 48013
Number of sequences better than 0.5: 45
Number of HSP's better than 0.5 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47877
Number of HSP's gapped (non-prelim): 116
length of query: 593
length of database: 367,240,239
effective HSP length: 19
effective length of query: 574
effective length of database: 355,149,722
effective search space: 203855940428
effective search space used: 203855940428
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)