BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3191640.2.1
(923 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA... 94 2e-017
gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthe... 76 5e-012
gb|BF473363.1|BF473363 WHE0923_F04_L07ZS Wheat 5-15 DAP spi... 64 2e-008
gb|BJ236635.1|BJ236635 BJ236635 Y. Ogihara unpublished cDNA... 64 2e-008
gb|AL810175.1|AL810175 AL810175 d:15 Triticum aestivum cDNA... 64 2e-008
gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated se... 56 4e-006
gb|BJ226169.1|BJ226169 BJ226169 Y. Ogihara unpublished cDNA... 56 4e-006
gb|BJ231070.1|BJ231070 BJ231070 Y. Ogihara unpublished cDNA... 56 4e-006
gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA... 56 4e-006
gb|CD868569.1|CD868569 AZO2.109E15F001114 AZO2 Triticum aes... 56 4e-006
gb|CD868596.1|CD868596 AZO2.109F15R010517 AZO2 Triticum aes... 56 4e-006
gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA... 54 2e-005
gb|CA622651.1|CA622651 wl1n.pk0098.d7 wl1n Triticum aestivu... 52 7e-005
gb|CA622772.1|CA622772 wl1n.pk0099.d2 wl1n Triticum aestivu... 52 7e-005
gb|BQ167136.1|BQ167136 WHE0056_A08_A16ZK Cheyenne wheat end... 52 7e-005
gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA... 48 0.001
gb|CN008087.1|CN008087 WHE2637_B12_C23ZE Wheat Fusarium gra... 48 0.001
gb|BE413623.1|BE413623 SCU001.C10.R990714 ITEC SCU Wheat En... 46 0.004
gb|BE498146.1|BE498146 WHE0954_H09_P18ZS Wheat pre-anthesis... 46 0.004
gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis... 46 0.004
gb|CD888683.1|CD888683 G118.108O04R010925 G118 Triticum aes... 46 0.004
gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivu... 46 0.004
gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivu... 46 0.004
gb|CK207586.1|CK207586 FGAS019223 Triticum aestivum FGAS: L... 46 0.004
gb|DR736658.1|DR736658 FGAS082028 Triticum aestivum FGAS: L... 46 0.004
gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aes... 44 0.017
gb|BG605368.1|BG605368 WHE2329_A04_A07ZS Wheat pre-anthesis... 42 0.067
gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA... 42 0.067
gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA... 42 0.067
gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA... 42 0.067
gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA... 42 0.067
gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA... 42 0.067
gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestiv... 42 0.067
gb|CD454172.1|CD454172 WHE0987-0990_E10_E10ZT CS wheat pre-... 42 0.067
gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthe... 42 0.067
gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthe... 42 0.067
gb|CD935816.1|CD935816 OV.102I15R010426 OV Triticum aestivu... 42 0.067
gb|CD935820.1|CD935820 OV.102I21R010426 OV Triticum aestivu... 42 0.067
gb|DR734786.1|DR734786 FGAS080540 Triticum aestivum FGAS: L... 42 0.067
gb|BE490404.1|BE490404 WHE0367_G10_M19ZS Wheat cold-stresse... 40 0.26
gb|BF484866.1|BF484866 WHE2320_E08_J16ZS Wheat pre-anthesis... 40 0.26
gb|CA698292.1|CA698292 wlk8.pk0001.f10 wlk8 Triticum aestiv... 40 0.26
gb|CD869001.1|CD869001 AZO2.110G13F010115 AZO2 Triticum aes... 40 0.26
gb|CD879152.1|CD879152 AZO4.104H24F010929 AZO4 Triticum aes... 40 0.26
gb|CD894869.1|CD894869 G118.127F12F010824 G118 Triticum aes... 40 0.26
gb|CK194790.1|CK194790 FGAS003222 Triticum aestivum FGAS: L... 40 0.26
gb|CK196582.1|CK196582 FGAS005041 Triticum aestivum FGAS: L... 40 0.26
gb|DR741258.1|DR741258 FGAS001189 Triticum aestivum FGAS: L... 40 0.26
>gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3i08 3', mRNA sequence
Length = 583
Score = 93.7 bits (47), Expect = 2e-017
Identities = 113/135 (83%)
Strand = Plus / Minus
Query: 550 aacatctccggcacgtcgtccacgcccgaagccgtcagcctgctctgctccgagacgcag 609
|||||| ||||||| || ||||| ||||| ||||||||||||||||||||||||| | ||
Sbjct: 438 aacatcaccggcacttcctccacccccgaggccgtcagcctgctctgctccgagaagaag 379
Query: 610 ccgtgcagcggcgtctcgctcatcgatgtcaacgtcgagtacgccggcaagaacaacaag 669
|| ||| |||||| | | ||| ||||| |||||||| ||||||| |||||||||
Sbjct: 378 ccctgcgaaggcgtcacaatgtccgacgtcaagatcgagtactccggcaaaaacaacaag 319
Query: 670 accatggctgtgtgc 684
|||||||||||||||
Sbjct: 318 accatggctgtgtgc 304
Score = 40.1 bits (20), Expect = 0.26
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 416 tcaccttcgagaacatcaggatggaggaggtggccaaccccatcatcatcgaccag 471
|||||| ||||||| ||| ||||||||| || | ||||||| ||||||||||||
Sbjct: 569 tcacctacgagaacgtcaagatggaggactcgggctaccccattatcatcgaccag 514
>gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_A04_B08, mRNA sequence
Length = 710
Score = 75.8 bits (38), Expect = 5e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 530 tcaaggacgtcaccttccgcaacatctccggcacgtcgtccacgcccgaagccgtcagcc 589
|||||||||| |||||| |||||| ||||||| || |||| ||||| ||||||||||
Sbjct: 578 tcaaggacgttaccttcaaaaacatcaccggcacctccgccacccccgaggccgtcagcc 519
Query: 590 tgctctgctccgagacgcagccgtgcagcggcgtctcgctcatcgatgtcaacgtcgagt 649
||||||||||||| | | |||| ||| |||||| | | ||| ||||| ||||||
Sbjct: 518 tgctctgctccgaaaagaagccctgcgaaggcgtcacaatgtccgacgtcaagatcgagt 459
Query: 650 acgccggcaagaacaacaagaccatggctgtgtgcagcaacgccaagggaaccgccaagg 709
|| ||||||||||||||||||| ||| |||| |||| | ||| ||||| ||||||| ||
Sbjct: 458 actccggcaagaacaacaagactatgactgtctgcacccacgtcaaggtcaccgccacgg 399
Query: 710 ga 711
||
Sbjct: 398 ga 397
>gb|BF473363.1|BF473363 WHE0923_F04_L07ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0923_F04_L07, mRNA sequence
Length = 545
Score = 63.9 bits (32), Expect = 2e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 178 tcgaccattggcaccggcgacgactgcgtctccatc 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 330 tcgaccatcggcaccggcgacgactgcgtctccatc 365
>gb|BJ236635.1|BJ236635 BJ236635 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe22h09 5', mRNA sequence
Length = 637
Score = 63.9 bits (32), Expect = 2e-008
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 178 tcgaccattggcaccggcgacgactgcgtctccatcggccctgggagc 225
|||||||| |||||||||| ||| ||||||||||||||||| ||||||
Sbjct: 339 tcgaccatgggcaccggcggcgaatgcgtctccatcggccccgggagc 386
>gb|AL810175.1|AL810175 AL810175 d:15 Triticum aestivum cDNA clone E01_d15_plate_7, mRNA
sequence
Length = 566
Score = 63.9 bits (32), Expect = 2e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 178 tcgaccattggcaccggcgacgactgcgtctccatc 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 131 tcgaccatcggcaccggcgacgactgcgtctccatc 166
>gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0442_H04_O08, mRNA
sequence
Length = 632
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 449 ccaaccccatcatcatcgaccagtacttctgc 480
||||||||||||||||||||||||||| ||||
Sbjct: 440 ccaaccccatcatcatcgaccagtactactgc 471
>gb|BJ226169.1|BJ226169 BJ226169 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl25f11 5', mRNA sequence
Length = 579
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 450 caaccccatcatcatcgaccagtacttctgcc 481
|||||||||||||||||||||||||| |||||
Sbjct: 64 caaccccatcatcatcgaccagtactactgcc 95
>gb|BJ231070.1|BJ231070 BJ231070 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl25f11 3', mRNA sequence
Length = 551
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 450 caaccccatcatcatcgaccagtacttctgcc 481
|||||||||||||||||||||||||| |||||
Sbjct: 488 caaccccatcatcatcgaccagtactactgcc 457
>gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8k17 5', mRNA sequence
Length = 556
Score = 56.0 bits (28), Expect = 4e-006
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 256 ggccccgggcagggcatcagtgtgggctgcctaggccgctacaaggatgagaaggacgtg 315
|||||||| || |||||||| |||||| |||| || || |||||||| ||||||||||||
Sbjct: 15 ggccccggccacggcatcagcgtgggcagcctggggcggtacaaggacgagaaggacgtg 74
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| ||||||||||||||||||
Sbjct: 393 gtcaacctcaagtacaccggcacgaacaacaagaccatggc 433
>gb|CD868569.1|CD868569 AZO2.109E15F001114 AZO2 Triticum aestivum cDNA clone AZO2109E15,
mRNA sequence
Length = 541
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 449 ccaaccccatcatcatcgaccagtacttctgc 480
||||||||||||||||||||||||||| ||||
Sbjct: 268 ccaaccccatcatcatcgaccagtactactgc 299
>gb|CD868596.1|CD868596 AZO2.109F15R010517 AZO2 Triticum aestivum cDNA clone AZO2109F15,
mRNA sequence
Length = 618
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 449 ccaaccccatcatcatcgaccagtacttctgc 480
||||||||||||||||||||||||||| ||||
Sbjct: 467 ccaaccccatcatcatcgaccagtactactgc 436
>gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh27l09 3', mRNA sequence
Length = 677
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 187 ggcaccggcgacgactgcgtctccatcggcc 217
|||||||||||||||||| ||||||||||||
Sbjct: 676 ggcaccggcgacgactgcatctccatcggcc 646
>gb|CA622651.1|CA622651 wl1n.pk0098.d7 wl1n Triticum aestivum cDNA clone wl1n.pk0098.d7 5'
end, mRNA sequence
Length = 437
Score = 52.0 bits (26), Expect = 7e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 451 aaccccatcatcatcgaccagtacttctgc 480
||||||||||||||||||||||||| ||||
Sbjct: 1 aaccccatcatcatcgaccagtactactgc 30
>gb|CA622772.1|CA622772 wl1n.pk0099.d2 wl1n Triticum aestivum cDNA clone wl1n.pk0099.d2 5'
end, mRNA sequence
Length = 436
Score = 52.0 bits (26), Expect = 7e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 451 aaccccatcatcatcgaccagtacttctgc 480
||||||||||||||||||||||||| ||||
Sbjct: 1 aaccccatcatcatcgaccagtactactgc 30
>gb|BQ167136.1|BQ167136 WHE0056_A08_A16ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0056_A08_A16, mRNA sequence
Length = 604
Score = 52.0 bits (26), Expect = 7e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 188 gcaccggcgacgactgcgtctccatc 213
||||||||||||||||||||||||||
Sbjct: 11 gcaccggcgacgactgcgtctccatc 36
>gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 5', mRNA sequence
Length = 553
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| ||||||||||||||||||
Sbjct: 260 gtcaacctcaagtacaccggcacgaacaacaagaccatggc 300
>gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 3', mRNA sequence
Length = 531
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| ||||||||||||||||||
Sbjct: 266 gtcaacctcaagtacaccggcacgaacaacaagaccatggc 226
>gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 5', mRNA sequence
Length = 642
Score = 48.1 bits (24), Expect = 0.001
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 256 ggccccgggcagggcatcagtgtgggctgcctaggccgctacaaggatgagaaggacgtg 315
|||||||| || || ||||| |||||| |||| || || |||||||| ||||||||||||
Sbjct: 429 ggccccggccacgggatcagcgtgggcagcctggggcggtacaaggacgagaaggacgtg 488
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 192 cggcgacgactgcgtctccatcgg 215
||||||||||||| ||||||||||
Sbjct: 365 cggcgacgactgcatctccatcgg 388
>gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 5', mRNA sequence
Length = 600
Score = 48.1 bits (24), Expect = 0.001
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 256 ggccccgggcagggcatcagtgtgggctgcctaggccgctacaaggatgagaaggacgtg 315
|||||||| || || ||||| |||||| |||| || || |||||||| ||||||||||||
Sbjct: 456 ggccccggccacgggatcagcgtgggcagcctggggcggtacaaggacgagaaggacgtg 515
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 192 cggcgacgactgcgtctccatcgg 215
||||||||||||| ||||||||||
Sbjct: 392 cggcgacgactgcatctccatcgg 415
>gb|CN008087.1|CN008087 WHE2637_B12_C23ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2637_B12_C23,
mRNA sequence
Length = 546
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 449 ccaaccccatcatcatcgaccagtacttctgc 480
|||| |||||||||||||||||||||| ||||
Sbjct: 495 ccaatcccatcatcatcgaccagtactactgc 526
>gb|BE413623.1|BE413623 SCU001.C10.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU001.C10, mRNA sequence
Length = 758
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 445 gtggccaaccccatcatcatcgaccag 471
||||||||||||||| |||||||||||
Sbjct: 466 gtggccaaccccatcgtcatcgaccag 492
>gb|BE498146.1|BE498146 WHE0954_H09_P18ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0954_H09_P18, mRNA sequence
Length = 417
Score = 46.1 bits (23), Expect = 0.004
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 188 gcaccggcgacgactgcgtctccatcggccc 218
||||||||||||||||||| ||| |||||||
Sbjct: 350 gcaccggcgacgactgcgtttccgtcggccc 380
>gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2334_A09_A18, mRNA sequence
Length = 488
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 187 ggcaccggcgacgactgcgtctccatc 213
|||||||||||||||||||| ||||||
Sbjct: 198 ggcaccggcgacgactgcgtgtccatc 224
>gb|CD888683.1|CD888683 G118.108O04R010925 G118 Triticum aestivum cDNA clone G118108O04,
mRNA sequence
Length = 731
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 445 gtggccaaccccatcatcatcgaccag 471
||||||||||||||| |||||||||||
Sbjct: 461 gtggccaaccccatcgtcatcgaccag 435
>gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivum cDNA clone OV102E15, mRNA
sequence
Length = 693
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 187 ggcaccggcgacgactgcgtctccatc 213
|||||||||||||||||||| ||||||
Sbjct: 66 ggcaccggcgacgactgcgtgtccatc 92
Score = 42.1 bits (21), Expect = 0.067
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 452 accccatcatcatcgaccagt 472
|||||||||||||||||||||
Sbjct: 325 accccatcatcatcgaccagt 345
>gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivum cDNA clone OV102K13, mRNA
sequence
Length = 695
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 187 ggcaccggcgacgactgcgtctccatc 213
|||||||||||||||||||| ||||||
Sbjct: 66 ggcaccggcgacgactgcgtgtccatc 92
Score = 42.1 bits (21), Expect = 0.067
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 452 accccatcatcatcgaccagt 472
|||||||||||||||||||||
Sbjct: 325 accccatcatcatcgaccagt 345
>gb|CK207586.1|CK207586 FGAS019223 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 445 gtggccaaccccatcatcatcgaccag 471
||||||||||||||| |||||||||||
Sbjct: 593 gtggccaaccccatcgtcatcgaccag 619
>gb|DR736658.1|DR736658 FGAS082028 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1118
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 445 gtggccaaccccatcatcatcgaccag 471
||||||||||||||| |||||||||||
Sbjct: 507 gtggccaaccccatcgtcatcgaccag 481
>gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 690
Score = 44.1 bits (22), Expect = 0.017
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 187 ggcaccggcgacgactgcgtctccat 212
|||||||||||||||||| |||||||
Sbjct: 275 ggcaccggcgacgactgcatctccat 300
>gb|BG605368.1|BG605368 WHE2329_A04_A07ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2329_A04_A07, mRNA sequence
Length = 564
Score = 42.1 bits (21), Expect = 0.067
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 196 gacgactgcgtctccatcggccctgggagcgac 228
||||||||| |||||||||||| |||||||||
Sbjct: 496 gacgactgcatctccatcggccaggggagcgac 528
>gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 5', mRNA sequence
Length = 656
Score = 42.1 bits (21), Expect = 0.067
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| |||||||||||||||||
Sbjct: 361 gtcaacctcaagtacaccggcaccaacaacaagaccatggc 401
>gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11d16 3', mRNA sequence
Length = 337
Score = 42.1 bits (21), Expect = 0.067
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| |||||||||||||||||
Sbjct: 270 gtcaacctcaagtacaccggcaccaacaacaagaccatggc 230
>gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 3', mRNA sequence
Length = 612
Score = 42.1 bits (21), Expect = 0.067
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| |||||||||||||||||
Sbjct: 269 gtcaacctcaagtacaccggcaccaacaacaagaccatggc 229
>gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 3', mRNA sequence
Length = 634
Score = 42.1 bits (21), Expect = 0.067
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| |||||||||||||||||
Sbjct: 216 gtcaacctcaagtacaccggcaccaacaacaagaccatggc 176
>gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23c18 3', mRNA sequence
Length = 716
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 190 accggcgacgactgcgtctccatcg 214
||||| |||||||||||||||||||
Sbjct: 624 accggggacgactgcgtctccatcg 600
>gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestivum cDNA clone wia1c.pk003.h2 5'
end, mRNA sequence
Length = 572
Score = 42.1 bits (21), Expect = 0.067
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| |||||||||||||||||
Sbjct: 276 gtcaacctcaagtacaccggcaccaacaacaagaccatggc 316
>gb|CD454172.1|CD454172 WHE0987-0990_E10_E10ZT CS wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0987-0990_E10_E10, mRNA
sequence
Length = 608
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 449 ccaaccccatcatcatcgaccagta 473
|||||||||||||||| ||||||||
Sbjct: 531 ccaaccccatcatcattgaccagta 507
>gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_C03_F05, mRNA sequence
Length = 649
Score = 42.1 bits (21), Expect = 0.067
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 637 gtcaacgtcgagtacgccggcaagaacaacaagaccatggc 677
|||||| || ||||| |||||| |||||||||||||||||
Sbjct: 303 gtcaacctcaagtacaccggcaccaacaacaagaccatggc 263
>gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2329_A04_A07, mRNA sequence
Length = 619
Score = 42.1 bits (21), Expect = 0.067
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 451 aaccccatcatcatcgaccag 471
|||||||||||||||||||||
Sbjct: 497 aaccccatcatcatcgaccag 477
>gb|CD935816.1|CD935816 OV.102I15R010426 OV Triticum aestivum cDNA clone OV102I15, mRNA
sequence
Length = 661
Score = 42.1 bits (21), Expect = 0.067
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 452 accccatcatcatcgaccagt 472
|||||||||||||||||||||
Sbjct: 548 accccatcatcatcgaccagt 528
>gb|CD935820.1|CD935820 OV.102I21R010426 OV Triticum aestivum cDNA clone OV102I21, mRNA
sequence
Length = 660
Score = 42.1 bits (21), Expect = 0.067
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 452 accccatcatcatcgaccagt 472
|||||||||||||||||||||
Sbjct: 548 accccatcatcatcgaccagt 528
>gb|DR734786.1|DR734786 FGAS080540 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 837
Score = 42.1 bits (21), Expect = 0.067
Identities = 75/93 (80%)
Strand = Plus / Plus
Query: 126 gaacacggacggcgtccatgtcggcgggtcctccaatgtacgcatcaccaactcgaccat 185
||||||||||||| |||| |||||| | ||| | | || |||||| || ||||| |||
Sbjct: 607 gaacacggacggcatccacgtcggctgctccagccacgtccgcatcgccgactcggtcat 666
Query: 186 tggcaccggcgacgactgcgtctccatcggccc 218
||||| |||||||| ||||| ||| |||||||
Sbjct: 667 cggcacgggcgacgaatgcgtgtccgtcggccc 699
>gb|BE490404.1|BE490404 WHE0367_G10_M19ZS Wheat cold-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0367_G10_M19, mRNA
sequence
Length = 363
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 555 ctccggcacgtcgtccacgc 574
||||||||||||||||||||
Sbjct: 127 ctccggcacgtcgtccacgc 108
>gb|BF484866.1|BF484866 WHE2320_E08_J16ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2320_E08_J16, mRNA sequence
Length = 472
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 192 cggcgacgactgcgtctccatcgg 215
||||||||||||| ||||||||||
Sbjct: 377 cggcgacgactgcatctccatcgg 400
>gb|CA698292.1|CA698292 wlk8.pk0001.f10 wlk8 Triticum aestivum cDNA clone wlk8.pk0001.f10
5' end, mRNA sequence
Length = 510
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 555 ctccggcacgtcgtccacgc 574
||||||||||||||||||||
Sbjct: 147 ctccggcacgtcgtccacgc 128
>gb|CD869001.1|CD869001 AZO2.110G13F010115 AZO2 Triticum aestivum cDNA clone AZO2110G13,
mRNA sequence
Length = 650
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 555 ctccggcacgtcgtccacgc 574
||||||||||||||||||||
Sbjct: 150 ctccggcacgtcgtccacgc 131
>gb|CD879152.1|CD879152 AZO4.104H24F010929 AZO4 Triticum aestivum cDNA clone AZO4104H24,
mRNA sequence
Length = 599
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 555 ctccggcacgtcgtccacgc 574
||||||||||||||||||||
Sbjct: 158 ctccggcacgtcgtccacgc 139
>gb|CD894869.1|CD894869 G118.127F12F010824 G118 Triticum aestivum cDNA clone G118127F12,
mRNA sequence
Length = 708
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 555 ctccggcacgtcgtccacgc 574
||||||||||||||||||||
Sbjct: 174 ctccggcacgtcgtccacgc 155
>gb|CK194790.1|CK194790 FGAS003222 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 827
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 555 ctccggcacgtcgtccacgc 574
||||||||||||||||||||
Sbjct: 247 ctccggcacgtcgtccacgc 228
>gb|CK196582.1|CK196582 FGAS005041 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 876
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 555 ctccggcacgtcgtccacgc 574
||||||||||||||||||||
Sbjct: 256 ctccggcacgtcgtccacgc 237
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 213,888
Number of Sequences: 636343
Number of extensions: 213888
Number of successful extensions: 65523
Number of sequences better than 0.5: 51
Number of HSP's better than 0.5 without gapping: 50
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 65410
Number of HSP's gapped (non-prelim): 114
length of query: 923
length of database: 367,240,239
effective HSP length: 20
effective length of query: 903
effective length of database: 354,513,379
effective search space: 320125581237
effective search space used: 320125581237
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)