BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115474.2.1
(798 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA743206.1|CA743206 wri1s.pk002.l12 wri1s Triticum aesti... 400 e-110
gb|CA743007.1|CA743007 wri1s.pk002.d4 wri1s Triticum aestiv... 365 3e-099
gb|CD866468.1|CD866468 AZO2.103I16F001107 AZO2 Triticum aes... 281 4e-074
gb|CD868845.1|CD868845 AZO2.109P24F001124 AZO2 Triticum aes... 242 3e-062
gb|CA608277.1|CA608277 wr1.pk0089.c8 wr1 Triticum aestivum ... 232 3e-059
gb|BJ311435.1|BJ311435 BJ311435 Y. Ogihara unpublished cDNA... 228 5e-058
gb|BJ305844.1|BJ305844 BJ305844 Y. Ogihara unpublished cDNA... 220 1e-055
gb|BJ274598.1|BJ274598 BJ274598 Y. Ogihara unpublished cDNA... 127 1e-027
gb|CD921750.1|CD921750 G750.001N20F010309 G750 Triticum aes... 127 1e-027
gb|CA643094.1|CA643094 wre1n.pk0071.a10 wre1n Triticum aest... 119 3e-025
gb|CA663897.1|CA663897 wlmk1.pk0031.g7 wlmk1 Triticum aesti... 113 2e-023
gb|CD868940.1|CD868940 AZO2.110D21R010328 AZO2 Triticum aes... 109 3e-022
gb|CV771512.1|CV771512 FGAS065905 Triticum aestivum FGAS: L... 46 0.004
gb|BE404374.1|BE404374 WHE0441_D11_G21ZS Wheat etiolated se... 42 0.058
>gb|CA743206.1|CA743206 wri1s.pk002.l12 wri1s Triticum aestivum cDNA clone wri1s.pk002.l12
5' end, mRNA sequence
Length = 627
Score = 400 bits (202), Expect = e-110
Identities = 475/566 (83%)
Strand = Plus / Plus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 19 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcact 78
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
| |||| ||| ||||||||||||||||| |||||||| ||||| |||||||||||| ||
Sbjct: 79 gctcatatgttgcctggataacatctgccgtcatggccaatatcggagttcgccacctcc 138
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
|||| | ||||||||||| |||||||| |||||||| |||||||||| |||| ||
Sbjct: 139 gaactttagcacattctggtggcgcttctccgcgttctatccgctcatttagctctcgtt 198
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
|||||| ||| ||||| || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 199 ccatcattctgatcctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 258
Query: 241 tgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgcttccttcccactgt 300
||||||||||||||||| ||||||| ||||| |||| || |||||||| |||||||||||
Sbjct: 259 tgaaacaagcatcaaaactgtgaggtggttttagcaatgcgattgctttcttcccactgt 318
Query: 301 cagcacaagttacttccgcgccatatttctttagagcgcctgcagcaaccttgagattta 360
| |||||| ||||||| |||||||| ||||| ||||| || ||||| || || || || |
Sbjct: 319 ctgcacaaattacttctgcgccatacttcttgagagcaccagcagccactttaaggttca 378
Query: 361 caatattatcatcaaccactatgattcgcttcttgtgaagaaggctgcccagtgttgaat 420
||| ||||| |||||||| |||||| || |||||||||||||||| |||| | ||| |
Sbjct: 379 caacgttatcgtcaaccacaatgatttgcctcttgtgaagaaggctacccaacgctgagt 438
Query: 421 tgccgactactccattcctgcaatgcagtttatctatcccacccaatgctctttgtagcg 480
|||| || ||||||||| ||| ||||| ||||||| || ||||| || | ||| |
Sbjct: 439 tgccaacgactccattcttgccatgcaccttatctactccgcccaaagcccgccttagtg 498
Query: 481 aaacctgaagcatgcttgcacgaagtggcttcataattacattcaagttatattccctga 540
| |||||||||| ||||||||||| |||||||| |||||||||||||||| |||||
Sbjct: 499 aggcctgaagcatacttgcacgaagcggcttcatgattacattcaagttatgctccctcg 558
Query: 541 atatatgtgaattgctcttgacagaa 566
|||||| |||| ||||||||| ||||
Sbjct: 559 atatatttgaactgctcttgatagaa 584
>gb|CA743007.1|CA743007 wri1s.pk002.d4 wri1s Triticum aestivum cDNA clone wri1s.pk002.d4 5'
end, mRNA sequence
Length = 635
Score = 365 bits (184), Expect = 3e-099
Identities = 388/456 (85%)
Strand = Plus / Plus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||||||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 23 acaattgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcact 82
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
| |||| ||| ||||||||||||||||| |||||||| ||||| |||||||||||| ||
Sbjct: 83 gctcatatgttgcctggataacatctgccgtcatggccaatatcggagttcgccacctcc 142
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
|||| | ||||||||||| |||||||| |||||||| |||||||||| |||| ||
Sbjct: 143 gaactttagcacattctggtggcgcttctccgcgttctatccgctcatttagctctcgtt 202
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
|||||| ||| ||||| || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 203 ccatcattctgatcctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 262
Query: 241 tgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgcttccttcccactgt 300
||||||||||||||||| ||||||| ||||| |||| || |||||||| |||||||||||
Sbjct: 263 tgaaacaagcatcaaaactgtgaggtggttttagcaatgcgattgctttcttcccactgt 322
Query: 301 cagcacaagttacttccgcgccatatttctttagagcgcctgcagcaaccttgagattta 360
| |||||| ||||||| |||||||| ||||| ||||| || ||||| || || || || |
Sbjct: 323 ctgcacaaattacttctgcgccatacttcttgagagcaccagcagccactttaaggttca 382
Query: 361 caatattatcatcaaccactatgattcgcttcttgtgaagaaggctgcccagtgttgaat 420
||| ||||| |||||||| |||||| || |||||||||||||||| |||| | ||| |
Sbjct: 383 caacgttatcgtcaaccacaatgatttgcctcttgtgaagaaggctacccaacgctgagt 442
Query: 421 tgccgactactccattcctgcaatgcagtttatcta 456
|||| || ||||||||| ||| ||||| |||||||
Sbjct: 443 tgccaacgactccattcttgccatgcaccttatcta 478
Score = 83.8 bits (42), Expect = 2e-014
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 484 cctgaagcatgcttgcacgaagtggcttcataattacattcaagttatattccctgaata 543
|||||||||| ||||||||||| |||||||| |||||||||||||||| ||||| |||
Sbjct: 506 cctgaagcatacttgcacgaagcggcttcatgattacattcaagttatgctccctcgata 565
Query: 544 tatgtgaattgctcttga 561
||| |||| |||||||||
Sbjct: 566 tatttgaactgctcttga 583
>gb|CD866468.1|CD866468 AZO2.103I16F001107 AZO2 Triticum aestivum cDNA clone AZO2103I16,
mRNA sequence
Length = 486
Score = 281 bits (142), Expect = 4e-074
Identities = 295/346 (85%)
Strand = Plus / Minus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 388 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcagt 329
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
| |||| ||| |||||||| || ||||||||||| || ||||| |||||||||||| ||
Sbjct: 328 gctcatatgttgcctggatgacgtctgctgtcattgccaatatcggagttcgccacctcc 269
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
|||| | ||||||||||| ||||| || |||||||| |||||||||| |||||||
Sbjct: 268 gaacgttagcacattctggtggcgcttccccgcgttctatccgctcatttagctctcttt 209
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
|||||| ||| ||||| || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 208 ccatcattctgatcctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 149
Query: 241 tgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgcttccttcccactgt 300
||||||||||||||||| ||||||| ||||| |||| || |||||||| |||||||||||
Sbjct: 148 tgaaacaagcatcaaaactgtgaggtggttttagcaatgcgattgctttcttcccactgt 89
Query: 301 cagcacaagttacttccgcgccatatttctttagagcgcctgcagc 346
| || ||| ||||||| ||||| || ||||| ||||| || |||||
Sbjct: 88 ctgcgcaaattacttctgcgccgtacttcttgagagcaccagcagc 43
>gb|CD868845.1|CD868845 AZO2.109P24F001124 AZO2 Triticum aestivum cDNA clone AZO2109P24,
mRNA sequence
Length = 636
Score = 242 bits (122), Expect = 3e-062
Identities = 245/286 (85%)
Strand = Plus / Minus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 286 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcagt 227
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
| |||| ||| |||||||| || ||||||||||| || ||||| |||||||||||| ||
Sbjct: 226 gctcatatgttgcctggatgacgtctgctgtcattgccaatatcggagttcgccacctcc 167
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
|||| | ||||||||||| ||||| || |||||||| |||||||||| |||||||
Sbjct: 166 gaacgttagcacattctggtggcgcttccccgcgttctatccgctcatttagctctcttt 107
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
|||||| ||| ||||| || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 106 ccatcattctgatcctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 47
Query: 241 tgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgc 286
||||||||||||||||| ||||||| ||||| |||| || ||||||
Sbjct: 46 tgaaacaagcatcaaaactgtgaggtggttttagcaatgcgattgc 1
>gb|CA608277.1|CA608277 wr1.pk0089.c8 wr1 Triticum aestivum cDNA clone wr1.pk0089.c8 5'
end, mRNA sequence
Length = 506
Score = 232 bits (117), Expect = 3e-059
Identities = 228/265 (86%)
Strand = Plus / Minus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 268 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcagt 209
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
| |||| ||| |||||||| || ||||||||||| || ||||| |||||||||||| ||
Sbjct: 208 gctcatatgttgcctggatgacgtctgctgtcattgccaatatcggagttcgccacctcc 149
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
|||| | ||||||||||| ||||| || |||||||| |||||||||| |||||||
Sbjct: 148 gaacgttagcacattctggtggcgcttccccgcgttctatccgctcatttagctctcttt 89
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
|||||| ||| ||||| || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 88 ccatcattctgatcctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 29
Query: 241 tgaaacaagcatcaaaattgtgagg 265
||||||||||||||||| |||||||
Sbjct: 28 tgaaacaagcatcaaaactgtgagg 4
>gb|BJ311435.1|BJ311435 BJ311435 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd27m20 3', mRNA sequence
Length = 734
Score = 228 bits (115), Expect = 5e-058
Identities = 226/263 (85%)
Strand = Plus / Plus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 470 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcagt 529
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
| |||| ||| |||||||| || ||||||||||| || ||||| |||||||||||| ||
Sbjct: 530 gctcatatgttgcctggatgacgtctgctgtcattgccaatatcggagttcgccacctcc 589
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
|||| | ||||||||||| ||||| || |||||||| |||||||||| |||||||
Sbjct: 590 gaacgttagcacattctggtggcgcttccccgcgttctatccgctcatttagctctcttt 649
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
|||||| ||| ||||| || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 650 ccatcattctgatcctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 709
Query: 241 tgaaacaagcatcaaaattgtga 263
||||||||||||||||| |||||
Sbjct: 710 tgaaacaagcatcaaaactgtga 732
>gb|BJ305844.1|BJ305844 BJ305844 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd27m20 5', mRNA sequence
Length = 560
Score = 220 bits (111), Expect = 1e-055
Identities = 318/387 (82%)
Strand = Plus / Minus
Query: 203 ggcttcaaatccatccatttcaggcatctgtatgtccatgaaacaagcatcaaaattgtg 262
||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||
Sbjct: 560 ggcttcaaacccatccatttctggcatttgtatgtccatgaaacaagcatcaaaactgtg 501
Query: 263 aggaggtttcagcagtgtgattgcttccttcccactgtcagcacaagttacttccgcgcc 322
||| ||||| |||| || |||||||| |||||||||||| || ||| ||||||| |||||
Sbjct: 500 aggtggttttagcaatgcgattgctttcttcccactgtctgcgcaaattacttctgcgcc 441
Query: 323 atatttctttagagcgcctgcagcaaccttgagatttacaatattatcatcaaccactat 382
|| ||||| ||||| || ||||| || || || || ||| || || |||||||| ||
Sbjct: 440 gtacttcttgagagcaccagcagccactttaaggttcacagcgttgtcgtcaaccacaat 381
Query: 383 gattcgcttcttgtgaagaaggctgcccagtgttgaattgccgactactccattcctgca 442
|||| || |||||||||||||||| |||| | ||| ||||| || | ||||||| ||
Sbjct: 380 gatttgcctcttgtgaagaaggctacccaaagctgagttgccaaccagtccattcttgac 321
Query: 443 atgcagtttatctatcccacccaatgctctttgtagcgaaacctgaagcatgcttgcacg 502
|||| ||||||| |||||||| || | ||| || ||| |||||| ||||||||
Sbjct: 320 atgcgccttatctactccacccaaagcccgccttagtgaggcctcaagcatacttgcacg 261
Query: 503 aagtggcttcataattacattcaagttatattccctgaatatatgtgaattgctcttgac 562
||| |||||||| |||||||||||||||| |||||| |||||| |||| |||||||||
Sbjct: 260 aagcggcttcatgattacattcaagttatgctccctggatatatttgaactgctcttgat 201
Query: 563 agaacttttagggttctccaaaagaaa 589
|||| | |||||||||||||||||||
Sbjct: 200 agaattcgtagggttctccaaaagaaa 174
>gb|BJ274598.1|BJ274598 BJ274598 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22o12 3', mRNA sequence
Length = 665
Score = 127 bits (64), Expect = 1e-027
Identities = 103/116 (88%)
Strand = Plus / Plus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 543 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcact 602
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccac 116
| |||| ||| ||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 603 gctcatatgttgcctggataacatctgccgtcatggccaatatcggagttcgccac 658
>gb|CD921750.1|CD921750 G750.001N20F010309 G750 Triticum aestivum cDNA clone G750001N20,
mRNA sequence
Length = 690
Score = 127 bits (64), Expect = 1e-027
Identities = 103/116 (88%)
Strand = Plus / Minus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 130 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcact 71
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccac 116
| |||| ||| ||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 70 gctcatatgttgcctggataacatctgccgtcatggccaatatcggagttcgccac 15
>gb|CA643094.1|CA643094 wre1n.pk0071.a10 wre1n Triticum aestivum cDNA clone
wre1n.pk0071.a10 5' end, mRNA sequence
Length = 470
Score = 119 bits (60), Expect = 3e-025
Identities = 135/159 (84%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 159 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcact 100
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatat-tggagttcgccactgc 119
| |||| ||| ||||||||||||||||| |||||||| ||||| |||||||||||| |
Sbjct: 99 gctcatatgttgcctggataacatctgccgtcatggccaatatcnggagttcgccacctc 40
Query: 120 cgaacccctacgcattctggtggggcttctccacgttct 158
||||| | ||||||||||| |||||||| ||||||
Sbjct: 39 cgaactttagcacattctggtggcgcttctccgcgttct 1
>gb|CA663897.1|CA663897 wlmk1.pk0031.g7 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0031.g7
5' end, mRNA sequence
Length = 503
Score = 113 bits (57), Expect = 2e-023
Identities = 163/197 (82%), Gaps = 1/197 (0%)
Strand = Plus / Minus
Query: 486 tgaagcatgcttgcacgaagtggcttcataattacattcaagttatattccctgaatata 545
|||||||| ||||||||||| |||||||| |||||||||||||||| ||||| |||||
Sbjct: 335 tgaagcatacttgcacgaagcggcttcatgattacattcaagttatgctccctcgatata 276
Query: 546 tgtgaattgctcttgacagaacttttagggttctccaaaagaaataactttgtagagtct 605
| |||| ||||||||| |||| | ||||||||||||||||||| | ||| | || ||||
Sbjct: 275 tttgaactgctcttgatagaattcgtagggttctccaaaagaaagagcttcggagggtct 216
Query: 606 ggctgatacaatgttcctcaatttagtaaccaaaagaggcatggagtgggattctttcag 665
| ||||| | || ||| || ||| ||| |||| ||||||| || |||||||| ||||
Sbjct: 215 gactgat-ctttgctccgcagtttgctaagcaaatgaggcattgaatgggattccttcat 157
Query: 666 ccaggtttctttgtcaa 682
||||||||| |||||||
Sbjct: 156 ccaggtttccttgtcaa 140
Score = 42.1 bits (21), Expect = 0.058
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 742 tcagttgtcaattcagtctgaactcccagtctttgcaaatgatacttagtaaccttg 798
||||| |||||||| || | ||||| || ||||||||||| ||||| |||||||||
Sbjct: 80 tcagtggtcaattccgttttgactccaagcctttgcaaatggtacttggtaaccttg 24
>gb|CD868940.1|CD868940 AZO2.110D21R010328 AZO2 Triticum aestivum cDNA clone AZO2110D21,
mRNA sequence
Length = 695
Score = 109 bits (55), Expect = 3e-022
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 1 acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
|||| ||||| || |||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 560 acaactgctccccttcgaatggcttggagacatagccatccatttcacatttcaagcagt 619
Query: 61 gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgcca 115
| |||| ||| |||||||| || ||||||||||| || ||||| |||||||||||
Sbjct: 620 gctcatatgttgcctggatgacgtctgctgtcattgccaatatcggagttcgcca 674
>gb|CV771512.1|CV771512 FGAS065905 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 886
Score = 46.1 bits (23), Expect = 0.004
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 tcgaatggcttggaaacataaccatccattt 45
|||||||||||||| ||||| ||||||||||
Sbjct: 700 tcgaatggcttggagacatacccatccattt 730
>gb|BE404374.1|BE404374 WHE0441_D11_G21ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0441_D11_G21, mRNA
sequence
Length = 589
Score = 42.1 bits (21), Expect = 0.058
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 742 tcagttgtcaattcagtctgaactcccagtctttgcaaatgatacttagtaaccttg 798
||||| |||||||| || | ||||| || ||||||||||| ||||| |||||||||
Sbjct: 544 tcagtggtcaattccgttttgactccaagcctttgcaaatggtacttggtaaccttg 488
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 133,921
Number of Sequences: 636343
Number of extensions: 133921
Number of successful extensions: 39053
Number of sequences better than 0.5: 14
Number of HSP's better than 0.5 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39016
Number of HSP's gapped (non-prelim): 35
length of query: 798
length of database: 367,240,239
effective HSP length: 19
effective length of query: 779
effective length of database: 355,149,722
effective search space: 276661633438
effective search space used: 276661633438
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)