BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115208.2.1
(1469 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE498386.1|BE498386 WHE0952_C04_E08ZS Wheat pre-anthesis... 327 1e-087
emb|AJ577380.1|TAE577380 Triticum aestivum partial mRNA for... 303 2e-080
gb|BJ252455.1|BJ252455 BJ252455 Y. Ogihara unpublished cDNA... 258 1e-066
gb|BJ263952.1|BJ263952 BJ263952 Y. Ogihara unpublished cDNA... 226 3e-057
gb|BF293967.1|BF293967 WHE2162_C03_F06ZS Triticum turgidum ... 184 1e-044
gb|BJ246521.1|BJ246521 BJ246521 Y. Ogihara unpublished cDNA... 184 1e-044
gb|BJ258359.1|BJ258359 BJ258359 Y. Ogihara unpublished cDNA... 176 3e-042
gb|BQ903982.1|BQ903982 Ta03_21e08_R Ta03_AAFC_ECORC_Fusariu... 174 1e-041
gb|BI751763.1|BI751763 Ta01_12e06_R Ta01_AAFC_ECORC_Fusariu... 165 1e-038
gb|CA593599.1|CA593599 wpa1c.pk002.n10 wpa1c Triticum aesti... 149 6e-034
gb|BJ254491.1|BJ254491 BJ254491 Y. Ogihara unpublished cDNA... 125 9e-027
gb|BJ257358.1|BJ257358 BJ257358 Y. Ogihara unpublished cDNA... 107 2e-021
gb|BJ262940.1|BJ262940 BJ262940 Y. Ogihara unpublished cDNA... 105 9e-021
gb|CK201104.1|CK201104 FGAS009623 Triticum aestivum FGAS: L... 101 1e-019
gb|BJ225843.1|BJ225843 BJ225843 Y. Ogihara unpublished cDNA... 72 1e-010
gb|BJ230741.1|BJ230741 BJ230741 Y. Ogihara unpublished cDNA... 62 1e-007
gb|BQ245274.1|BQ245274 TaE15027B12R TaE15 Triticum aestivum... 62 1e-007
gb|CA597345.1|CA597345 wpa1c.pk016.e13 wpa1c Triticum aesti... 58 2e-006
gb|BJ226053.1|BJ226053 BJ226053 Y. Ogihara unpublished cDNA... 56 7e-006
gb|BJ260750.1|BJ260750 BJ260750 Y. Ogihara unpublished cDNA... 56 7e-006
gb|AL821741.1|AL821741 AL821741 N:130 Triticum aestivum cDN... 52 1e-004
gb|BF202587.1|BF202587 WHE1785_G01_N01ZS Wheat pre-anthesis... 50 4e-004
gb|BE445335.1|BE445335 WHE1134_B12_C24ZS Wheat etiolated se... 42 0.11
gb|BE500123.1|BE500123 WHE0978_D05_H10ZS Wheat pre-anthesis... 42 0.11
gb|BJ230965.1|BJ230965 BJ230965 Y. Ogihara unpublished cDNA... 42 0.11
gb|BJ266439.1|BJ266439 BJ266439 Y. Ogihara unpublished cDNA... 42 0.11
gb|BQ239540.1|BQ239540 TaE05029F11R TaE05 Triticum aestivum... 42 0.11
gb|CA500263.1|CA500263 WHE4017_D03_G05ZT Wheat meiotic anth... 42 0.11
gb|CD886105.1|CD886105 G118.101G07F010601 G118 Triticum aes... 42 0.11
gb|CF133789.1|CF133789 WHE4363_E10_I19ZT Wheat meiotic flor... 42 0.11
gb|BE604297.1|BE604297 WHE1413-1416_A24_A24ZS Wheat drought... 40 0.42
gb|BE637667.1|BE637667 WHE1755-1758_O22_O22ZS Wheat pre-ant... 40 0.42
gb|BJ214303.1|BJ214303 BJ214303 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ223302.1|BJ223302 BJ223302 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ225421.1|BJ225421 BJ225421 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ221789.1|BJ221789 BJ221789 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ230254.1|BJ230254 BJ230254 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ231732.1|BJ231732 BJ231732 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ234811.1|BJ234811 BJ234811 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ236394.1|BJ236394 BJ236394 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ245467.1|BJ245467 BJ245467 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ251349.1|BJ251349 BJ251349 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ265468.1|BJ265468 BJ265468 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ281168.1|BJ281168 BJ281168 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ286228.1|BJ286228 BJ286228 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ296828.1|BJ296828 BJ296828 Y. Ogihara unpublished cDNA... 40 0.42
gb|BJ321642.1|BJ321642 BJ321642 Y. Ogihara unpublished cDNA... 40 0.42
gb|CA485075.1|CA485075 WHE4314_B09_C18ZS Wheat meiotic anth... 40 0.42
gb|CA497993.1|CA497993 WHE3237_A06_A11ZT Wheat meiotic anth... 40 0.42
gb|CA598157.1|CA598157 wyr1c.pk003.e12 wyr1c Triticum aesti... 40 0.42
gb|CA602490.1|CA602490 wr1.pk0016.b12 wr1 Triticum aestivum... 40 0.42
gb|CA604684.1|CA604684 wr1.pk0043.g5 wr1 Triticum aestivum ... 40 0.42
gb|CA608226.1|CA608226 wr1.pk0090.g9 wr1 Triticum aestivum ... 40 0.42
gb|CA619023.1|CA619023 wl1n.pk0043.f9 wl1n Triticum aestivu... 40 0.42
gb|CA620538.1|CA620538 wl1n.pk0057.d11 wl1n Triticum aestiv... 40 0.42
gb|CA629604.1|CA629604 wle1n.pk0019.e3 wle1n Triticum aesti... 40 0.42
gb|CA633189.1|CA633189 wle1n.pk0068.h1 wle1n Triticum aesti... 40 0.42
gb|CA639448.1|CA639448 wre1n.pk0014.g3 wre1n Triticum aesti... 40 0.42
gb|CA692686.1|CA692686 wlm96.pk060.g24 wlm96 Triticum aesti... 40 0.42
gb|CA706514.1|CA706514 wdk1c.pk024.g8 wdk1c Triticum aestiv... 40 0.42
gb|CA709786.1|CA709786 wdk2c.pk013.n5 wdk2c Triticum aestiv... 40 0.42
gb|CA720248.1|CA720248 wkm2n.pk006.k18 wkm2n Triticum aesti... 40 0.42
gb|CA728327.1|CA728327 wdi1c.pk004.c18 wdi1c Triticum aesti... 40 0.42
gb|CD868133.1|CD868133 AZO2.108B23F001113 AZO2 Triticum aes... 40 0.42
gb|CD868134.1|CD868134 AZO2.108B23R010328 AZO2 Triticum aes... 40 0.42
gb|CD869217.1|CD869217 AZO2.111A18F001115 AZO2 Triticum aes... 40 0.42
gb|CD902800.1|CD902800 G356.108C03F010918 G356 Triticum aes... 40 0.42
gb|CD909167.1|CD909167 G468.111P05F010817 G468 Triticum aes... 40 0.42
gb|CD920561.1|CD920561 G608.117J22F010912 G608 Triticum aes... 40 0.42
gb|CD926336.1|CD926336 G750.121K14F010711 G750 Triticum aes... 40 0.42
gb|CD931122.1|CD931122 GR45.113I22F010419 GR45 Triticum aes... 40 0.42
gb|CD933912.1|CD933912 GR45.122G16F010720 GR45 Triticum aes... 40 0.42
gb|CD937641.1|CD937641 OV.107L07F010205 OV Triticum aestivu... 40 0.42
gb|CD938655.1|CD938655 OV.110J14F010312 OV Triticum aestivu... 40 0.42
gb|CD938656.1|CD938656 OV.110J14R010406 OV Triticum aestivu... 40 0.42
gb|CD939792.1|CD939792 OV.115B04F010316 OV Triticum aestivu... 40 0.42
gb|CK153189.1|CK153189 FGAS031768 Triticum aestivum FGAS: T... 40 0.42
gb|CK164568.1|CK164568 FGAS048482 Triticum aestivum FGAS: T... 40 0.42
gb|CK164756.1|CK164756 FGAS048674 Triticum aestivum FGAS: T... 40 0.42
gb|CK165016.1|CK165016 FGAS048951 Triticum aestivum FGAS: T... 40 0.42
gb|CK165192.1|CK165192 FGAS049135 Triticum aestivum FGAS: T... 40 0.42
gb|CK165541.1|CK165541 FGAS049497 Triticum aestivum FGAS: T... 40 0.42
gb|CK165756.1|CK165756 FGAS049749 Triticum aestivum FGAS: T... 40 0.42
gb|CK166865.1|CK166865 FGAS051101 Triticum aestivum FGAS: T... 40 0.42
gb|CK167474.1|CK167474 FGAS051842 Triticum aestivum FGAS: T... 40 0.42
gb|CK199852.1|CK199852 FGAS008359 Triticum aestivum FGAS: L... 40 0.42
gb|CK211366.1|CK211366 FGAS023207 Triticum aestivum FGAS: L... 40 0.42
gb|CK211370.1|CK211370 FGAS023211 Triticum aestivum FGAS: L... 40 0.42
gb|DR737806.1|DR737806 FGAS083023 Triticum aestivum FGAS: L... 40 0.42
emb|AX756228.1| Sequence 967 from Patent WO03000905 40 0.42
>gb|BE498386.1|BE498386 WHE0952_C04_E08ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0952_C04_E08, mRNA sequence
Length = 526
Score = 327 bits (165), Expect = 1e-087
Identities = 333/389 (85%)
Strand = Plus / Plus
Query: 648 gtcatcaccgccgagttccgcaccttcatcgagatcgtcttcgagaaccccgagaagagc 707
||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 68 gtcatcaccgccgagcaccgcacctacattgagattgtcttcgagaaccccgagaagagc 127
Query: 708 atagactccctccacgtcgacggctacgccttcttcggcgtcgggatggggcctgggacg 767
|| ||| || ||||| ||||||||||||||||||||| || ||| ||||| || |||
Sbjct: 128 atcgacaccttccacctcgacggctacgccttcttcgccgccggcatgggaccggggcta 187
Query: 768 tggtcgccggagatgaggaagacgtacaacctactggacacggtgagccggcacacgatc 827
||| || ||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 188 tggacggtggagagcaggaagacatacaacctcctggacacggtgagccggcacacgatc 247
Query: 828 caggtgtacccgcggtcatggacggcgatcatgctgacattcgacaacgcgggcatgtgg 887
|||||||||||| |||| ||||||||| | |||||||| ||||||||||| || ||||||
Sbjct: 248 caggtgtacccgaggtcgtggacggcggtgatgctgacgttcgacaacgccgggatgtgg 307
Query: 888 agcgtccggtccaacgtctgggagcggtactacctcggggagcagttctacatcagcgtc 947
| | | ||||||| | |||||| |||||||||| ||||||||| | ||| | ||| |
Sbjct: 308 aacttgaggtccaatctgtgggagaggtactacctgggggagcagctgtacgtgagctgc 367
Query: 948 atctcgccggcgcggtcgctgcgcgacgagtacaacatgcccgacaacgccctccgctgc 1007
| ||||||||| ||||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 368 acctcgccggccaggtcgctcagggacgagtacaacatgcccgacaactccctccgctgc 427
Query: 1008 ggcaaggtcgtggggctgccgctgccgcc 1036
||||||||||| || |||||||||||||
Sbjct: 428 ggcaaggtcgtcggcatgccgctgccgcc 456
>emb|AJ577380.1|TAE577380 Triticum aestivum partial mRNA for putative L-ascorbate oxidase
homolog
Length = 506
Score = 303 bits (153), Expect = 2e-080
Identities = 330/389 (84%)
Strand = Plus / Plus
Query: 648 gtcatcaccgccgagttccgcaccttcatcgagatcgtcttcgagaaccccgagaagagc 707
||||||||||| ||| |||||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 64 gtcatcaccgcggagcaccgcacctacattgagattgtctttgagaaccccgagaagagc 123
Query: 708 atagactccctccacgtcgacggctacgccttcttcggcgtcgggatggggcctgggacg 767
|| ||| || ||||| || |||||||||||||||||| || ||| ||||| || |||
Sbjct: 124 atcgacaccttccacctcaacggctacgccttcttcgccgccggcatgggaccggggcta 183
Query: 768 tggtcgccggagatgaggaagacgtacaacctactggacacggtgagccggcacacgatc 827
||| || ||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 184 tggacggtggagagcaggaagacatacaacctcctggacacggtgagccggcacacgatc 243
Query: 828 caggtgtacccgcggtcatggacggcgatcatgctgacattcgacaacgcgggcatgtgg 887
|||||||||||| |||| ||||||||| | |||||||| ||||||||||| || ||||||
Sbjct: 244 caggtgtacccgaggtcgtggacggcggtgatgctgacgttcgacaacgccgggatgtgg 303
Query: 888 agcgtccggtccaacgtctgggagcggtactacctcggggagcagttctacatcagcgtc 947
| | | ||||||| | |||||| |||||||||| || |||||| | ||| | ||| |
Sbjct: 304 aacttgaggtccaatctgtgggagaggtactacctgggcgagcagctatacgtgagctgc 363
Query: 948 atctcgccggcgcggtcgctgcgcgacgagtacaacatgcccgacaacgccctccgctgc 1007
| ||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 364 acctcgccggccaggtcgctcagggacgagtacaacatgcccgacaacgccctccgctgc 423
Query: 1008 ggcaaggtcgtggggctgccgctgccgcc 1036
||||||||||| || |||||||||||||
Sbjct: 424 ggcaaggtcgtcggcatgccgctgccgcc 452
>gb|BJ252455.1|BJ252455 BJ252455 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf24h01 3', mRNA sequence
Length = 732
Score = 258 bits (130), Expect = 1e-066
Identities = 283/334 (84%)
Strand = Plus / Minus
Query: 703 agagcatagactccctccacgtcgacggctacgccttcttcggcgtcgggatggggcctg 762
||||||| ||| || ||||| ||||||||||||||||||||| || ||| ||||| || |
Sbjct: 732 agagcatcgacaccttccacctcgacggctacgccttcttcgccgccggcatgggaccgg 673
Query: 763 ggacgtggtcgccggagatgaggaagacgtacaacctactggacacggtgagccggcaca 822
|| ||| || ||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 672 ggctatggacggtggagagcaggaagacatacaacctcctggacacggtgagccggcaca 613
Query: 823 cgatccaggtgtacccgcggtcatggacggcgatcatgctgacattcgacaacgcgggca 882
||||||||||||||||| |||| ||||||||| | |||||||| ||||||||||| || |
Sbjct: 612 cgatccaggtgtacccgaggtcgtggacggcggtgatgctgacgttcgacaacgccggga 553
Query: 883 tgtggagcgtccggtccaacgtctgggagcggtactacctcggggagcagttctacatca 942
|||||| | | ||||||| | |||||| |||||||||| ||||||||| | ||| | |
Sbjct: 552 tgtggaacttgaggtccaatctgtgggagaggtactacctgggggagcagctgtacgtga 493
Query: 943 gcgtcatctcgccggcgcggtcgctgcgcgacgagtacaacatgcccgacaacgccctcc 1002
|| || ||||||||| ||||||| | |||||||||||||||||||||||| ||||||
Sbjct: 492 gctgcacctcgccggccaggtcgctcagggacgagtacaacatgcccgacaactccctcc 433
Query: 1003 gctgcggcaaggtcgtggggctgccgctgccgcc 1036
|||||||||||||||| || |||||||||||||
Sbjct: 432 gctgcggcaaggtcgtcggcatgccgctgccgcc 399
>gb|BJ263952.1|BJ263952 BJ263952 Y. Ogihara unpublished cDNA library, Wh_h Triticum aestivum
cDNA clone whh7d03 3', mRNA sequence
Length = 694
Score = 226 bits (114), Expect = 3e-057
Identities = 219/254 (86%)
Strand = Plus / Minus
Query: 783 aggaagacgtacaacctactggacacggtgagccggcacacgatccaggtgtacccgcgg 842
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 650 aggaagacatacaacctcctggacacggtgagccggcacacgatccaggtgtacccgagg 591
Query: 843 tcatggacggcgatcatgctgacattcgacaacgcgggcatgtggagcgtccggtccaac 902
|| ||||||||| | |||||||| ||||||||||| || ||||||| | | |||||||
Sbjct: 590 tcgtggacggcggtgatgctgacgttcgacaacgccgggatgtggaacttgaggtccaat 531
Query: 903 gtctgggagcggtactacctcggggagcagttctacatcagcgtcatctcgccggcgcgg 962
| |||||| |||||||||| ||||||||| | ||| | ||| || ||||||||| ||
Sbjct: 530 ctgtgggagaggtactacctgggggagcagctgtacgtgagctgcacctcgccggccagg 471
Query: 963 tcgctgcgcgacgagtacaacatgcccgacaacgccctccgctgcggcaaggtcgtgggg 1022
||||| | ||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 470 tcgctcagggacgagtacaacatgcccgacaattccctccgctgcggcaaggtcgtcggc 411
Query: 1023 ctgccgctgccgcc 1036
|||||||||||||
Sbjct: 410 atgccgctgccgcc 397
>gb|BF293967.1|BF293967 WHE2162_C03_F06ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2162_C03_F06, mRNA sequence
Length = 442
Score = 184 bits (93), Expect = 1e-044
Identities = 120/129 (93%)
Strand = Plus / Plus
Query: 333 ccggccggctgggcctggtccatcaaccaggccaggtcgttccgctggaacctgacggcc 392
|||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 95 ccggacggatgggcctggtccatcaaccagtggaggtccttccgctggaacctgacggcc 154
Query: 393 agcgccgcgcggcccaacccgcagggctcctaccactacggccagatcaacatcacccgc 452
|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 155 agcgccgccaggcccaacccgcaggggtcctaccactacggccagatcaacatcacccgc 214
Query: 453 accatcaag 461
|||||||||
Sbjct: 215 accatcaag 223
Score = 58.0 bits (29), Expect = 2e-006
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 528 gaccccgagacccccgtgaagctcgccgagtacttcaacgccacc 572
||||||||||| || | |||||||||||||||||||||||||||
Sbjct: 290 gaccccgagacgccgctcaagctcgccgagtacttcaacgccacc 334
>gb|BJ246521.1|BJ246521 BJ246521 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24h01 5', mRNA sequence
Length = 627
Score = 184 bits (93), Expect = 1e-044
Identities = 120/129 (93%)
Strand = Plus / Plus
Query: 333 ccggccggctgggcctggtccatcaaccaggccaggtcgttccgctggaacctgacggcc 392
|||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 430 ccggacggatgggcctggtccatcaaccagtggaggtccttccgctggaacctgacggcc 489
Query: 393 agcgccgcgcggcccaacccgcagggctcctaccactacggccagatcaacatcacccgc 452
|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 490 agcgccgccaggcccaacccgcaggggtcctaccactacggccagatcaacatcacccgc 549
Query: 453 accatcaag 461
|||||||||
Sbjct: 550 accatcaag 558
Score = 109 bits (55), Expect = 6e-022
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 30 ggcaagacgtaccgcctccgcgtgtgcaacaccgggatcaaggcgtcgctcaacttccgc 89
||||||||||||||| ||||||| |||||| ||| |||||| | | |||||| | |||
Sbjct: 130 ggcaagacgtaccgcttccgcgtctgcaacgtcggcatcaagaccaccctcaacgtgcgc 189
Query: 90 atccagggccacgacatgaagctcgtcgagctggagggctcacataccctgcaggacgtg 149
||||||||||||| | | ||||| || ||| |||||||||| || ||| ||||| ||| |
Sbjct: 190 atccagggccacgtcctcaagctggtggagatggagggctcccacaccgtgcagaacgag 249
Query: 150 tacgactcgctggacgtgcacgtcggccactgcctctcc 188
||||||||| ||||||| ||| ||||||| |||||||||
Sbjct: 250 tacgactcgatggacgtccacatcggccagtgcctctcc 288
>gb|BJ258359.1|BJ258359 BJ258359 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh7d03 5', mRNA sequence
Length = 599
Score = 176 bits (89), Expect = 3e-042
Identities = 119/129 (92%)
Strand = Plus / Plus
Query: 333 ccggccggctgggcctggtccatcaaccaggccaggtcgttccgctggaacctgacggcc 392
|||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 318 ccggacggatgggcctggtccatcaaccagtggaggtccttccgctggaacctgacggcc 377
Query: 393 agcgccgcgcggcccaacccgcagggctcctaccactacggccagatcaacatcacccgc 452
|||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 378 agcgccgccaggcccaacccgcaggggtcctaccactacgggcagatcaacatcacccgc 437
Query: 453 accatcaag 461
|||||||||
Sbjct: 438 accatcaag 446
Score = 95.6 bits (48), Expect = 8e-018
Identities = 129/156 (82%)
Strand = Plus / Plus
Query: 33 aagacgtaccgcctccgcgtgtgcaacaccgggatcaaggcgtcgctcaacttccgcatc 92
|||||||||||| ||||||| |||||| || |||||| | | |||||| | ||||||
Sbjct: 21 aagacgtaccgcttccgcgtctgcaacgtgggcatcaagaccaccctcaacgtgcgcatc 80
Query: 93 cagggccacgacatgaagctcgtcgagctggagggctcacataccctgcaggacgtgtac 152
|||||||||| | | ||||| |||||| |||||||||| || ||| ||||| ||| ||||
Sbjct: 81 cagggccacgtcctcaagctggtcgagatggagggctcccacaccgtgcagaacgagtac 140
Query: 153 gactcgctggacgtgcacgtcggccactgcctctcc 188
||||| ||||||| ||| ||||||| |||||||||
Sbjct: 141 gactcaatggacgtccacatcggccagtgcctctcc 176
Score = 58.0 bits (29), Expect = 2e-006
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 528 gaccccgagacccccgtgaagctcgccgagtacttcaacgccacc 572
||||| ||||| ||| | |||||||||||||||||||||||||||
Sbjct: 513 gaccctgagacgcccctcaagctcgccgagtacttcaacgccacc 557
>gb|BQ903982.1|BQ903982 Ta03_21e08_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_21e08, mRNA
sequence
Length = 203
Score = 174 bits (88), Expect = 1e-041
Identities = 176/204 (86%), Gaps = 1/204 (0%)
Strand = Plus / Minus
Query: 589 acaaccagatgggcgacgtgccccccgccgtgaacggtcccctccatgtcatccccaatg 648
|||||||||||||||||| ||||| ||||||||||| ||| | || ||| | ||||| |
Sbjct: 203 acaaccagatgggcgacgaaccccctgccgtgaacggccccatgcacgtcgtgcccaacg 144
Query: 649 tcatcaccgccgagttccgcaccttcatcgagatcgtcttcgagaaccccgagaagagca 708
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 143 tcatcaccgccgagttccgcaccttcatcgaggtcgtcttcgagaaccccgagaagagca 84
Query: 709 tagactccctccacgtcgacggctacgccttcttcggcgtcgggatggggcctgggacgt 768
| || ||| | ||| ||| | ||||||||||||| ||||||||||||||| |||| ||
Sbjct: 83 tggagtccatgcacatcg-ggmgtacgccttcttcgccgtcgggatggggccggggaagt 25
Query: 769 ggtcgccggagatgaggaagacgt 792
|| || ||| | |||||||||||
Sbjct: 24 ggacggcggcggagaggaagacgt 1
>gb|BI751763.1|BI751763 Ta01_12e06_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_12e06, mRNA
sequence
Length = 246
Score = 165 bits (83), Expect = 1e-038
Identities = 160/187 (85%)
Strand = Plus / Plus
Query: 648 gtcatcaccgccgagttccgcaccttcatcgagatcgtcttcgagaaccccgagaagagc 707
||||||||| ||||| |||||||| ||| ||||| ||||||||||| |||||||||||
Sbjct: 60 gtcatcaccaccgagcaccgcacctacattgagattktcttcgagaacsccgagaagagc 119
Query: 708 atagactccctccacgtcgacggctacgccttcttcggcgtcgggatggggcctgggacg 767
|| ||| || ||||| ||||||||||||||||||||| || ||| ||||| || |||
Sbjct: 120 atcgacaccktccacctcgacggctacgccttcttcgccgccggcatgggaccggggcta 179
Query: 768 tggtcgccggagatgaggaagacgtacaacctactggacacggtgagccggcacacgatc 827
|||||| ||||| |||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 180 tggtcggtggagagcaggaagacatacaacctcctggacacggtgagccggcacaccatc 239
Query: 828 caggtgt 834
|||||||
Sbjct: 240 caggtgt 246
>gb|CA593599.1|CA593599 wpa1c.pk002.n10 wpa1c Triticum aestivum cDNA clone wpa1c.pk002.n10
5' end, mRNA sequence
Length = 545
Score = 149 bits (75), Expect = 6e-034
Identities = 175/207 (84%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 648 gtcatcaccgccgagttccgcaccttcatcgagatcgtcttcgagaaccccgagaagagc 707
||||||||||| ||| |||||||| ||| ||||| ||||| ||||||||||||||||||
Sbjct: 94 gtcatcaccgcggagcaccgcacctacattgagattgtctttgagaaccccgagaagagc 153
Query: 708 atagactccctccacgtcgacggctacgccttcttcggcgtcgggatggggcctgggacg 767
|| ||| || ||||| || |||||||||||||||||| || ||| ||||| || |||
Sbjct: 154 atcgacaccttccacctcaacggctacgccttcttcgccgccggcatgggaccggggcta 213
Query: 768 tggtcgccggagatgaggaagacgtacaacctactggacacggtgagccggcacacgatc 827
||| || ||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 214 tggacggtggagagcaggaagacatacaacctcctggacacggtgagccggcacacgatt 273
Query: 828 caggtgtacccgcggtcatggacggcg 854
|| ||||| ||| |||| |||||||||
Sbjct: 274 caagtgta-ccgaggtcgtggacggcg 299
>gb|BJ254491.1|BJ254491 BJ254491 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf5n08 3', mRNA sequence
Length = 592
Score = 125 bits (63), Expect = 9e-027
Identities = 150/179 (83%)
Strand = Plus / Minus
Query: 858 atgctgacattcgacaacgcgggcatgtggagcgtccggtccaacgtctgggagcggtac 917
|||||||| ||||||||||| || ||||||| | | ||||||| | |||||| |||||
Sbjct: 586 atgctgacgttcgacaacgccgggatgtggaacttgaggtccaatctgtgggagaggtac 527
Query: 918 tacctcggggagcagttctacatcagcgtcatctcgccggcgcggtcgctgcgcgacgag 977
||||| ||||||||| | ||| | ||| || ||||||||| ||||||| | ||||||
Sbjct: 526 tacctgggggagcagctgtacgtgagctgcacctcgccggccaggtcgctcagggacgag 467
Query: 978 tacaacatgcccgacaacgccctccgctgcggcaaggtcgtggggctgccgctgccgcc 1036
||||||||||||||||| |||||||||||||||||||||| || |||||||||||||
Sbjct: 466 tacaacatgcccgacaattccctccgctgcggcaaggtcgtcggcatgccgctgccgcc 408
>gb|BJ257358.1|BJ257358 BJ257358 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh10b24 5', mRNA sequence
Length = 684
Score = 107 bits (54), Expect = 2e-021
Identities = 150/182 (82%)
Strand = Plus / Plus
Query: 7 cgcccatgctcaccttcgaggcgggcaagacgtaccgcctccgcgtgtgcaacaccggga 66
|||||||| ||| | | ||||| ||||||||||||||| ||||||| |||||| || |
Sbjct: 30 cgcccatgttcaacgtggaggccggcaagacgtaccgcttccgcgtctgcaacgtgggca 89
Query: 67 tcaaggcgtcgctcaacttccgcatccagggccacgacatgaagctcgtcgagctggagg 126
||||| | | |||||| | |||||||||||||||| | | ||||| |||||| ||||||
Sbjct: 90 tcaagaccaccctcaacgtgcgcatccagggccacgtcctcaagctggtcgagatggagg 149
Query: 127 gctcacataccctgcaggacgtgtacgactcgctggacgtgcacgtcggccactgcctct 186
|||| || ||| ||||| ||| ||||||||| ||||||| ||| ||||||| |||||||
Sbjct: 150 gctcccacaccgtgcagaacgagtacgactcaatggacgtccacatcggccagtgcctct 209
Query: 187 cc 188
||
Sbjct: 210 cc 211
Score = 105 bits (53), Expect = 9e-021
Identities = 110/129 (85%)
Strand = Plus / Plus
Query: 908 ggagcggtactacctcggggagcagttctacatcagcgtcatctcgccggcgcggtcgct 967
|||| |||||||||| ||||||||| | ||| | ||| || ||||||||| |||||||
Sbjct: 239 ggagaggtactacctgggggagcagctgtacgtgagctgcacctcgccggccaggtcgct 298
Query: 968 gcgcgacgagtacaacatgcccgacaacgccctccgctgcggcaaggtcgtggggctgcc 1027
| ||||||||||||||||||||||| |||||||||||||||||||||| || ||||
Sbjct: 299 cagggacgagtacaacatgcccgacaattccctccgctgcggcaaggtcgtcggcatgcc 358
Query: 1028 gctgccgcc 1036
|||||||||
Sbjct: 359 gctgccgcc 367
>gb|BJ262940.1|BJ262940 BJ262940 Y. Ogihara unpublished cDNA library, Wh_h Triticum aestivum
cDNA clone whh10b24 3', mRNA sequence
Length = 657
Score = 105 bits (53), Expect = 9e-021
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 908 ggagcggtactacctcggggagcagttctacatcagcgtcatctcgccggcgcggtcgct 967
|||| |||||||||| ||||||||| | ||| | ||| || ||||||||| |||||||
Sbjct: 552 ggagaggtactacctgggggagcagctgtacgtgagctgcacctcgccggccaggtcgct 493
Query: 968 gcgcgacgagtacaacatgcccgacaacgccctccgctgcggcaaggtcgtggggctgcc 1027
| ||||||||||||||||||||||| |||||||||||||||||||||| || ||||
Sbjct: 492 cagggacgagtacaacatgcccgacaattccctccgctgcggcaaggtcgtcggcatgcc 433
Query: 1028 gctgccgcc 1036
|||||||||
Sbjct: 432 gctgccgcc 424
>gb|CK201104.1|CK201104 FGAS009623 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 862
Score = 101 bits (51), Expect = 1e-019
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 348 tggtccatcaaccaggccaggtcgttccgctggaacctgacggccagcgccgcgcggccc 407
||||| || |||||||| || || ||||| ||||||||||||||||||||||||||||||
Sbjct: 399 tggtcgatgaaccaggcaagatccttccggtggaacctgacggccagcgccgcgcggccc 458
Query: 408 aacccgcagggctcctaccactacggc 434
||||||||||| || | ||||||||||
Sbjct: 459 aacccgcaggggtcgttccactacggc 485
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 139 tgcaggacgtgtacgactcgctggacgtgcacgtcgg 175
||||| |||| |||||||| |||||||||||||||||
Sbjct: 181 tgcagaacgtctacgactccctggacgtgcacgtcgg 217
>gb|BJ225843.1|BJ225843 BJ225843 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl24b08 5', mRNA sequence
Length = 562
Score = 71.9 bits (36), Expect = 1e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 378 tggaacctgacggccagcgccgcgcggcccaacccgcagggctcctaccactacggccag 437
|||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||
Sbjct: 76 tggaacctgacggcgagcgggccgaggcccaacccgcagggctcgtaccactacggccag 135
>gb|BJ230741.1|BJ230741 BJ230741 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl24b08 3', mRNA sequence
Length = 669
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 403 ggcccaacccgcagggctcctaccactacggccag 437
||||||||||||||||||| |||||||||||||||
Sbjct: 666 ggcccaacccgcagggctcgtaccactacggccag 632
>gb|BQ245274.1|BQ245274 TaE15027B12R TaE15 Triticum aestivum cDNA clone TaE15027B12R, mRNA
sequence
Length = 463
Score = 61.9 bits (31), Expect = 1e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 380 gaacctgacggccagcgccgcgcggcccaacccgcagggctcctaccactacggccagat 439
|||||||||||| || | ||||||| |||||||||||||| |||||||||||| |||
Sbjct: 345 gaacctgacggcgagtgggccgcggccgaacccgcagggctcgtaccactacggctcgat 404
Query: 440 caacatcacccgcaccatc 458
|||| | | ||||||||||
Sbjct: 405 caacgtgagccgcaccatc 423
>gb|CA597345.1|CA597345 wpa1c.pk016.e13 wpa1c Triticum aestivum cDNA clone wpa1c.pk016.e13 5'
end, mRNA sequence
Length = 533
Score = 58.0 bits (29), Expect = 2e-006
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 972 gacgagtacaacatgcccgacaacgccctccgctgcggcaagg 1014
|||||||||||||||||||||||| | |||| ||||||||||
Sbjct: 478 gacgagtacaacatgcccgacaactcnntccgttgcggcaagg 436
>gb|BJ226053.1|BJ226053 BJ226053 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl24o11 5', mRNA sequence
Length = 593
Score = 56.0 bits (28), Expect = 7e-006
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 373 tccgctggaacctgacggccagcgccgcgcggcccaacccgcagggctcctaccactacg 432
|||| |||||||||||||| |||| || |||| ||||| |||||||| ||||||||||
Sbjct: 335 tccggtggaacctgacggcgagcggaccgaggccgaaccctcagggctcgtaccactacg 394
Query: 433 gcca 436
||||
Sbjct: 395 gcca 398
>gb|BJ260750.1|BJ260750 BJ260750 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh26k22 5', mRNA sequence
Length = 643
Score = 56.0 bits (28), Expect = 7e-006
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 373 tccgctggaacctgacggccagcgccgcgcggcccaacccgcagggctcctaccactacg 432
|||| |||||||||||||| |||| || |||| ||||| |||||||| ||||||||||
Sbjct: 514 tccggtggaacctgacggcgagcggaccgaggccgaaccctcagggctcgtaccactacg 573
Query: 433 gcca 436
||||
Sbjct: 574 gcca 577
>gb|AL821741.1|AL821741 AL821741 N:130 Triticum aestivum cDNA clone A12_N130_plate_64, mRNA
sequence
Length = 554
Score = 52.0 bits (26), Expect = 1e-004
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 380 gaacctgacggccagcgccgcgcggcccaacccgcagggctcctaccactacgg 433
|||||||||||| |||| ||||| | |||||||||||||| |||||||||||
Sbjct: 326 gaacctgacggcgagcgggccgcggacgaacccgcagggctcgtaccactacgg 379
>gb|BF202587.1|BF202587 WHE1785_G01_N01ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1785_G01_N01, mRNA sequence
Length = 325
Score = 50.1 bits (25), Expect = 4e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 7 cgcccatgctcaccttcgaggcgggcaagacgtaccgcctccgcgtgtgcaac 59
|||||||| ||| | | ||||| ||||||||||||||| ||||||| ||||||
Sbjct: 242 cgcccatgttcaacgtggaggccggcaagacgtaccgcttccgcgtctgcaac 294
>gb|BE445335.1|BE445335 WHE1134_B12_C24ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1134_B12_C24,
mRNA sequence
Length = 508
Score = 42.1 bits (21), Expect = 0.11
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 360 caggccaggtcgttccgctggaacctgacggccagcgccgcgcggcccaacccgcagggc 419
|||||||| || |||| |||||||||||||| |||| | |||| ||||| || |||
Sbjct: 49 caggccagatcaatccggtggaacctgacggcaagcggaccaaggccgaaccctcaaggc 108
Query: 420 tcctaccactacggcca 436
|| ||||||||||||||
Sbjct: 109 tcataccactacggcca 125
>gb|BE500123.1|BE500123 WHE0978_D05_H10ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0978_D05_H10, mRNA sequence
Length = 573
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 195 gtcgacgccgaccaggcgccc 215
|||||||||||||||||||||
Sbjct: 55 gtcgacgccgaccaggcgccc 75
>gb|BJ230965.1|BJ230965 BJ230965 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl24o11 3', mRNA sequence
Length = 558
Score = 42.1 bits (21), Expect = 0.11
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 724 tcgacggctacgccttcttcggcgtcgggatgg 756
|||||||||||||||||| | |||||||||||
Sbjct: 479 tcgacggctacgccttctgggtcgtcgggatgg 447
>gb|BJ266439.1|BJ266439 BJ266439 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh26k22 3', mRNA sequence
Length = 680
Score = 42.1 bits (21), Expect = 0.11
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 724 tcgacggctacgccttcttcggcgtcgggatgg 756
|||||||||||||||||| | |||||||||||
Sbjct: 539 tcgacggctacgccttctgggtcgtcgggatgg 507
>gb|BQ239540.1|BQ239540 TaE05029F11R TaE05 Triticum aestivum cDNA clone TaE05029F11R, mRNA
sequence
Length = 662
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 195 gtcgacgccgaccaggcgccc 215
|||||||||||||||||||||
Sbjct: 120 gtcgacgccgaccaggcgccc 140
>gb|CA500263.1|CA500263 WHE4017_D03_G05ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4017_D03_G05, mRNA sequence
Length = 323
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 195 gtcgacgccgaccaggcgccc 215
|||||||||||||||||||||
Sbjct: 133 gtcgacgccgaccaggcgccc 153
>gb|CD886105.1|CD886105 G118.101G07F010601 G118 Triticum aestivum cDNA clone G118101G07,
mRNA sequence
Length = 545
Score = 42.1 bits (21), Expect = 0.11
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 360 caggccaggtcgttccgctggaacctgacggccagcgccgcgcggcccaacccgcagggc 419
|||||||| || |||| |||||||||||||| |||| | |||| ||||| || |||
Sbjct: 228 caggccagatcaatccggtggaacctgacggcaagcggaccaaggccgaaccctcaaggc 287
Query: 420 tcctaccactacggcca 436
|| ||||||||||||||
Sbjct: 288 tcataccactacggcca 304
>gb|CF133789.1|CF133789 WHE4363_E10_I19ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4363_E10_I19, mRNA sequence
Length = 765
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 195 gtcgacgccgaccaggcgccc 215
|||||||||||||||||||||
Sbjct: 75 gtcgacgccgaccaggcgccc 95
>gb|BE604297.1|BE604297 WHE1413-1416_A24_A24ZS Wheat drought stressed leaf cDNA library
Triticum aestivum cDNA clone WHE1413-1416_A24_A24, mRNA
sequence
Length = 535
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 134 cgacggcaagctccgctacg 153
>gb|BE637667.1|BE637667 WHE1755-1758_O22_O22ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE1755-1758_O22_O22, mRNA
sequence
Length = 334
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 87 cgacggcaagctccgctacg 106
>gb|BJ214303.1|BJ214303 BJ214303 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26m04 5', mRNA sequence
Length = 655
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 186 cgacggcaagctccgctacg 205
>gb|BJ223302.1|BJ223302 BJ223302 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl4a14 5', mRNA sequence
Length = 427
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 181 cgacggcaagctccgctacg 200
>gb|BJ225421.1|BJ225421 BJ225421 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl22a04 5', mRNA sequence
Length = 642
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 171 cgacggcaagctccgctacg 190
>gb|BJ221789.1|BJ221789 BJ221789 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26m04 3', mRNA sequence
Length = 670
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 597 cgacggcaagctccgctacg 578
>gb|BJ230254.1|BJ230254 BJ230254 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl22a04 3', mRNA sequence
Length = 610
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 537 cgacggcaagctccgctacg 518
>gb|BJ231732.1|BJ231732 BJ231732 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl4a14 3', mRNA sequence
Length = 580
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 529 cgacggcaagctccgctacg 510
>gb|BJ234811.1|BJ234811 BJ234811 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe13o08 5', mRNA sequence
Length = 604
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 157 cgacggcaagctccgctacg 176
>gb|BJ236394.1|BJ236394 BJ236394 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe21i15 5', mRNA sequence
Length = 606
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 135 cgacggcaagctccgctacg 154
>gb|BJ245467.1|BJ245467 BJ245467 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19l24 5', mRNA sequence
Length = 686
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 192 cgacggcaagctccgctacg 211
>gb|BJ251349.1|BJ251349 BJ251349 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19l24 3', mRNA sequence
Length = 544
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 458 cgacggcaagctccgctacg 439
>gb|BJ265468.1|BJ265468 BJ265468 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22a24 3', mRNA sequence
Length = 608
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 599 cgacggcaagctccgctacg 580
>gb|BJ281168.1|BJ281168 BJ281168 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr20m23 5', mRNA sequence
Length = 614
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 189 cgacggcaagctccgctacg 208
>gb|BJ286228.1|BJ286228 BJ286228 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr19m23 3', mRNA sequence
Length = 627
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 510 cgacggcaagctccgctacg 491
>gb|BJ296828.1|BJ296828 BJ296828 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl14n19 3', mRNA sequence
Length = 576
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 501 cgacggcaagctccgctacg 482
>gb|BJ321642.1|BJ321642 BJ321642 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf21l17 3', mRNA sequence
Length = 602
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 528 cgacggcaagctccgctacg 509
>gb|CA485075.1|CA485075 WHE4314_B09_C18ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4314_B09_C18, mRNA sequence
Length = 664
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 91 cgacggcaagctccgctacg 110
>gb|CA497993.1|CA497993 WHE3237_A06_A11ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3237_A06_A11, mRNA sequence
Length = 427
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 263 cgacggcaagctccgctacg 282
>gb|CA598157.1|CA598157 wyr1c.pk003.e12 wyr1c Triticum aestivum cDNA clone wyr1c.pk003.e12
5' end, mRNA sequence
Length = 620
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 cgacggcaagctccgctacg 504
||||||||||||||||||||
Sbjct: 171 cgacggcaagctccgctacg 190
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 398,930
Number of Sequences: 636343
Number of extensions: 398930
Number of successful extensions: 122383
Number of sequences better than 0.5: 92
Number of HSP's better than 0.5 without gapping: 90
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 122245
Number of HSP's gapped (non-prelim): 134
length of query: 1469
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1449
effective length of database: 354,513,379
effective search space: 513689886171
effective search space used: 513689886171
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)