BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.1
(642 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA... 387 e-106
gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA... 357 6e-097
gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA... 347 6e-094
gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA... 321 3e-086
gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA... 307 5e-082
gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA... 297 5e-079
gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA... 252 3e-065
gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA... 159 3e-037
gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestiv... 151 7e-035
gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthe... 151 7e-035
gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA... 149 3e-034
gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA... 125 4e-027
gb|BQ902457.1|BQ902457 Ta02_02g09_R Ta02_AAFC_ECORC_Fusariu... 64 1e-008
gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA... 62 5e-008
gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthe... 62 5e-008
gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis... 58 8e-007
gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivu... 58 8e-007
gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivu... 58 8e-007
gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthe... 54 1e-005
gb|CZ889985.1|CZ889985 gy41b11.x1.b.screen Bread wheat meth... 52 5e-005
gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA... 52 5e-005
gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA... 52 5e-005
gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA... 52 5e-005
gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aes... 48 7e-004
gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aes... 48 7e-004
gb|AL811841.1|AL811841 AL811841 d:15 Triticum aestivum cDNA... 48 7e-004
>gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8k17 5', mRNA sequence
Length = 556
Score = 387 bits (195), Expect = e-106
Identities = 380/441 (86%), Gaps = 3/441 (0%)
Strand = Plus / Plus
Query: 3 ggccacggcatcagcgtcggcagcctggggcggtacaaggacgagaaggacgtggaggac 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 ggccacggcatcagcgtgggcagcctggggcggtacaaggacgagaaggacgtggaggac 80
Query: 63 gtgaaggtgacggggtgcacgctcgccggcaccaccaacggcctgcgcatcaagtcgtac 122
| ||||||| ||||| || ||| |||||||||| || || ||||||||||||
Sbjct: 81 atccaggtgaccaactgcaccatcaagggcgccaccaacgggctccggatcaagtcgtac 140
Query: 123 gaggactccaagtcgtcgctcaaggccaccaagttcctgtaccaggacgtcaccatggac 182
||||||||||||||| |||||| ||||||| ||| ||||| | ||||| | ||||||
Sbjct: 141 gaggactccaagtcggcgctcagggccacccgcttcgtgtacgacgacgtgaaaatggac 200
Query: 183 aacgtctcctaccccatcatcatagaccagaagtactgccccaacaacatctgcgtcaag 242
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aacgtctcctaccccatcgtcatcgaccagaagtactgccccaacaacatctgcgccaag 260
Query: 243 tcc---ggcgcctccaaggtggccgtcaacgacgtcgtcttcaagaacatccacggcacc 299
|| |||||||||||||||| |||| |||| ||||||||||||||||| ||| |||
Sbjct: 261 gcccccggcgcctccaaggtggtcgtcgccgacatcgtcttcaagaacatcgtcgggacc 320
Query: 300 tccaacacgccggaggccatcacgctcaactgcgccaacaacctgccctgccagggcgtg 359
||| |||||| |||||| ||||||||||||||| ||||||| |||||||||||||| ||
Sbjct: 321 tccgccacgcccgaggccgtcacgctcaactgcgtcaacaacgtgccctgccagggcctg 380
Query: 360 cagctcatcaacgtcgacatcaagtacaacaggtccgacaacaagaccatgtccgtctgc 419
|||||| |||||||| || ||||||||| | | | |||||||||||||| ||||||||
Sbjct: 381 cagctcgtcaacgtcaacctcaagtacaccggcacgaacaacaagaccatggccgtctgc 440
Query: 420 aagaacgccatcggcaagtcc 440
||||||||| |||||| ||||
Sbjct: 441 aagaacgccgtcggcacgtcc 461
>gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 3', mRNA sequence
Length = 634
Score = 357 bits (180), Expect = 6e-097
Identities = 376/441 (85%), Gaps = 3/441 (0%)
Strand = Plus / Minus
Query: 3 ggccacggcatcagcgtcggcagcctggggcggtacaaggacgagaaggacgtggaggac 62
|||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 588 ggccacgggatcagcgtgggcagcctggggcggtacaaggacgagaagnacgtggaggac 529
Query: 63 gtgaaggtgacggggtgcacgctcgccggcaccaccaacggcctgcgcatcaagtcgtac 122
| ||||||| ||||| || ||| |||||||||| || || ||||||||||||
Sbjct: 528 atccaggtgaccaactgcaccatcaagggcgccaccaacgggctccggatcaagtcgtac 469
Query: 123 gaggactccaagtcgtcgctcaaggccaccaagttcctgtaccaggacgtcaccatggac 182
||||||||||||||| ||||| ||||||| ||| ||||| | ||||| | ||||||
Sbjct: 468 gaggactccaagtcggcgctccgggccacccgcttcgtgtacgacgacgtgaggatggac 409
Query: 183 aacgtctcctaccccatcatcatagaccagaagtactgccccaacaacatctgcgtcaag 242
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 408 aacgtctcctaccccatcgtcatcgaccagaagtactgccccaacaacatctgcgccaag 349
Query: 243 ---tccggcgcctccaaggtggccgtcaacgacgtcgtcttcaagaacatccacggcacc 299
|||||||||||||||||| |||| |||| ||||||||||||||||| ||| ||
Sbjct: 348 gcccccggcgcctccaaggtggtcgtcgccgacatcgtcttcaagaacatcgtcgggacg 289
Query: 300 tccaacacgccggaggccatcacgctcaactgcgccaacaacctgccctgccagggcgtg 359
|| |||||||||||| ||||||||||||||| ||||||| |||||||||||||| |
Sbjct: 288 tcggcgacgccggaggccgtcacgctcaactgcgtcaacaacgtgccctgccagggcctc 229
Query: 360 cagctcatcaacgtcgacatcaagtacaacaggtccgacaacaagaccatgtccgtctgc 419
|||||| |||||||| || ||||||||| | | || |||||||||||||| ||||||||
Sbjct: 228 cagctcgtcaacgtcaacctcaagtacaccggcaccaacaacaagaccatggccgtctgc 169
Query: 420 aagaacgccatcggcaagtcc 440
||||||||| |||||||||||
Sbjct: 168 aagaacgccgtcggcaagtcc 148
>gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 5', mRNA sequence
Length = 656
Score = 347 bits (175), Expect = 6e-094
Identities = 366/429 (85%), Gaps = 3/429 (0%)
Strand = Plus / Plus
Query: 15 agcgtcggcagcctggggcggtacaaggacgagaaggacgtggaggacgtgaaggtgacg 74
||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 1 agcgtgggcagcctggggcggtacaaggacgagaaggacgtggaggacatccaggtgacc 60
Query: 75 gggtgcacgctcgccggcaccaccaacggcctgcgcatcaagtcgtacgaggactccaag 134
||||| || ||| |||||||||| || || ||||||||||||||||||||||||
Sbjct: 61 aactgcaccatcaagggcgccaccaacgggctccggatcaagtcgtacgaggactccaag 120
Query: 135 tcgtcgctcaaggccaccaagttcctgtaccaggacgtcaccatggacaacgtctcctac 194
||| ||||| ||||||| ||| ||||| | ||||| | ||||||||||||||||||
Sbjct: 121 tcggcgctccgggccacccgcttcgtgtacgacgacgtgaggatggacaacgtctcctac 180
Query: 195 cccatcatcatagaccagaagtactgccccaacaacatctgcgtcaag---tccggcgcc 251
|||||| |||| ||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 181 cccatcgtcatcgaccagaagtactgccccaacaacatctgcgccaaggcccccggcgcc 240
Query: 252 tccaaggtggccgtcaacgacgtcgtcttcaagaacatccacggcacctccaacacgccg 311
|||||||||| |||| |||| ||||||||||||||||| ||| || || ||||||
Sbjct: 241 tccaaggtggtcgtcgccgacatcgtcttcaagaacatcgtcgggacgtcggcgacgccg 300
Query: 312 gaggccatcacgctcaactgcgccaacaacctgccctgccagggcgtgcagctcatcaac 371
|||||| ||||||||||||||| ||||||| |||||||||||||| | |||||| |||||
Sbjct: 301 gaggccgtcacgctcaactgcgtcaacaacgtgccctgccagggcctccagctcgtcaac 360
Query: 372 gtcgacatcaagtacaacaggtccgacaacaagaccatgtccgtctgcaagaacgccatc 431
||| || ||||||||| | | || |||||||||||||| ||||||||||||||||| ||
Sbjct: 361 gtcaacctcaagtacaccggcaccaacaacaagaccatggccgtctgcaagaacgccgtc 420
Query: 432 ggcaagtcc 440
|||||||||
Sbjct: 421 ggcaagtcc 429
>gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 3', mRNA sequence
Length = 612
Score = 321 bits (162), Expect = 3e-086
Identities = 350/412 (84%), Gaps = 3/412 (0%)
Strand = Plus / Minus
Query: 32 gcggtacaaggacgagaaggacgtggaggacgtgaaggtgacggggtgcacgctcgccgg 91
||||||||||||||||||||||||||||||| | ||||||| ||||| || ||
Sbjct: 612 gcggtacaaggacgagaaggacgtggaggacatccaggtgaccaactgcaccatcaaggg 553
Query: 92 caccaccaacggcctgcgcatcaagtcgtacgaggactccaagtcgtcgctcaaggccac 151
| |||||||||| || || ||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 552 cgccaccaacgggctccggatcaagtcgtacgaggactccaagtcggcgctccgggccac 493
Query: 152 caagttcctgtaccaggacgtcaccatggacaacgtctcctaccccatcatcatagacca 211
| ||| ||||| | ||||| | |||||||||||||||||||||||| |||| |||||
Sbjct: 492 ccgcttcgtgtacgacgacgtgaggatggacaacgtctcctaccccatcgtcatcgacca 433
Query: 212 gaagtactgccccaacaacatctgcgtcaag---tccggcgcctccaaggtggccgtcaa 268
|||||||||||||||||||||||||| |||| |||||||||||||||||| ||||
Sbjct: 432 gaagtactgccccaacaacatctgcgccaaggcccccggcgcctccaaggtggtcgtcgc 373
Query: 269 cgacgtcgtcttcaagaacatccacggcacctccaacacgccggaggccatcacgctcaa 328
|||| ||||||||||||||||| ||| || || |||||||||||| ||||||||||
Sbjct: 372 cgacatcgtcttcaagaacatcgtcgggacgtcggcgacgccggaggccgtcacgctcaa 313
Query: 329 ctgcgccaacaacctgccctgccagggcgtgcagctcatcaacgtcgacatcaagtacaa 388
||||| ||||||| |||||||||||||| | |||||| |||||||| || |||||||||
Sbjct: 312 ctgcgtcaacaacgtgccctgccagggcctccagctcgtcaacgtcaacctcaagtacac 253
Query: 389 caggtccgacaacaagaccatgtccgtctgcaagaacgccatcggcaagtcc 440
| | || |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 252 cggcaccaacaacaagaccatggccgtctgcaagaacgccgtcggcaagtcc 201
>gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 3', mRNA sequence
Length = 531
Score = 307 bits (155), Expect = 5e-082
Identities = 289/333 (86%), Gaps = 3/333 (0%)
Strand = Plus / Minus
Query: 111 atcaagtcgtacgaggactccaagtcgtcgctcaaggccaccaagttcctgtaccaggac 170
||||||||||||||||||||||||||| |||||| ||||||| ||| ||||| | |||
Sbjct: 530 atcaagtcgtacgaggactccaagtcggcgctcagggccacccgcttcgtgtacgacgac 471
Query: 171 gtcaccatggacaacgtctcctaccccatcatcatagaccagaagtactgccccaacaac 230
|| | |||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 470 gtgaaaatggacaacgtctcctaccccatcgtcatcgaccagaagtactgccccaacaac 411
Query: 231 atctgcgtcaagtcc---ggcgcctccaaggtggccgtcaacgacgtcgtcttcaagaac 287
||||||| |||| || |||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 410 atctgcgccaaggcccccggcgcctccaaggtggtcgtcgccgacatcgtcttcaagaac 351
Query: 288 atccacggcacctccaacacgccggaggccatcacgctcaactgcgccaacaacctgccc 347
||| ||| |||||| |||||| |||||| ||||||||||||||| ||||||| |||||
Sbjct: 350 atcgtcgggacctccgccacgcccgaggccgtcacgctcaactgcgtcaacaacgtgccc 291
Query: 348 tgccagggcgtgcagctcatcaacgtcgacatcaagtacaacaggtccgacaacaagacc 407
||||||||| |||||||| |||||||| || ||||||||| | | | |||||||||||
Sbjct: 290 tgccagggcctgcagctcgtcaacgtcaacctcaagtacaccggcacgaacaacaagacc 231
Query: 408 atgtccgtctgcaagaacgccatcggcaagtcc 440
||| ||||||||||||||||| |||||| ||||
Sbjct: 230 atggccgtctgcaagaacgccgtcggcacgtcc 198
>gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 5', mRNA sequence
Length = 553
Score = 297 bits (150), Expect = 5e-079
Identities = 284/328 (86%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 116 gtcgtacgaggactccaagtcgtcgctcaaggccaccaagttcctgtaccaggacgtcac 175
|||||||||||||||||||||| |||||| ||||||| ||| ||||| | ||||| |
Sbjct: 1 gtcgtacgaggactccaagtcggcgctcagggccacccgcttcgtgtacgacgacgtgaa 60
Query: 176 catggacaacgtctcctaccccatcatcatagaccagaagtactgccccaacaacatctg 235
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 61 aatggacaacgtctcctaccccatcgtcatcgaccagaagtactgccccaacaacatctg 120
Query: 236 cgtcaagtcc---ggcgcctccaaggtggccgtcaacgacgtcgtcttcaagaacatcca 292
|| |||| || |||||||||||||||| |||| |||| |||||||||||||||||
Sbjct: 121 cgccaaggcccccggcgcctccaaggtggtcgtcgccgacatcgtcttcaagaacatcgt 180
Query: 293 cggcacctccaacacgccggaggccatcacgctcaactgcgccaacaacctgccctgcca 352
||| |||||| |||||| |||||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 181 cgggacctccgccacgcccgaggccgtcacgctcaactgcgtcaacaacgtgccctgcca 240
Query: 353 gggcgtgcagctcatcaacgtcgacatcaagtacaacaggtccgacaacaagaccatgtc 412
|||| |||||||| |||||||| || ||||||||| | | | |||||||||||||| |
Sbjct: 241 gggcctgcagctcgtcaacgtcaacctcaagtacaccggcacgaacaacaagaccatggc 300
Query: 413 cgtctgcaagaacgccatcggcaagtcc 440
|||||||||||||||| |||||| ||||
Sbjct: 301 cgtctgcaagaacgccgtcggcacgtcc 328
>gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 3', mRNA sequence
Length = 619
Score = 252 bits (127), Expect = 3e-065
Identities = 285/337 (84%), Gaps = 3/337 (0%)
Strand = Plus / Minus
Query: 32 gcggtacaaggacgagaaggacgtggaggacgtgaaggtgacggggtgcacgctcgccgg 91
||||||||||||||||||||||||||||||| | ||||||| ||||| || ||
Sbjct: 619 gcggtacaaggacgagaaggacgtggaggacatccaggtgaccaactgcaccatcaaggg 560
Query: 92 caccaccaacggcctgcgcatcaagtcgtacgaggactccaagtcgtcgctcaaggccac 151
| |||||||||| || || ||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 559 cgccaccaacgggctccggatcaagtcgtacgaggactccaagtcggcgctccgggccac 500
Query: 152 caagttcctgtaccaggacgtcaccatggacaacgtctcctaccccatcatcatagacca 211
| ||| ||||| | ||||| | |||||||||||||||||||||||| |||| |||||
Sbjct: 499 ccgcttcgtgtacgacgacgtgaggatggacaacgtctcctaccccatcgtcatcgacca 440
Query: 212 gaagtactgccccaacaacatctgcgtcaag---tccggcgcctccaaggtggccgtcaa 268
|||||||||||||||||||||||||| |||| |||||||||||||||||| ||||
Sbjct: 439 gaagtactgccccaacaacatctgcgccaaggcccccggcgcctccaaggtggtcgtcgc 380
Query: 269 cgacgtcgtcttcaagaacatccacggcacctccaacacgccggaggccatcacgctcaa 328
|||| ||||||||||||||||| ||| || || |||||||||||| ||||||||||
Sbjct: 379 cgacatcgtcttcaagaacatcgtcgggacgtcggcgacgccggaggccgtcacgctcaa 320
Query: 329 ctgcgccaacaacctgccctgccagggcgtgcagctc 365
||||| ||||||| |||||||||||||| | ||||||
Sbjct: 319 ctgcgtcaacaacgtgccctgccagggcctccagctc 283
>gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 5', mRNA sequence
Length = 642
Score = 159 bits (80), Expect = 3e-037
Identities = 176/208 (84%)
Strand = Plus / Plus
Query: 3 ggccacggcatcagcgtcggcagcctggggcggtacaaggacgagaaggacgtggaggac 62
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggccacgggatcagcgtgggcagcctggggcggtacaaggacgagaaggacgtggaggac 494
Query: 63 gtgaaggtgacggggtgcacgctcgccggcaccaccaacggcctgcgcatcaagtcgtac 122
| ||||||| ||||| || ||| |||||||||| || || ||||||||||||
Sbjct: 495 atccaggtgaccaactgcaccatcaagggcgccaccaacgggctccggatcaagtcgtac 554
Query: 123 gaggactccaagtcgtcgctcaaggccaccaagttcctgtaccaggacgtcaccatggac 182
||||||||||||||| ||||| ||||||| ||| ||||| | ||||| | ||||||
Sbjct: 555 gaggactccaagtcggcgctccgggccacccgcttcgtgtacgacgacgtgaggatggac 614
Query: 183 aacgtctcctaccccatcatcatagacc 210
|||||||||||||||||| |||| ||||
Sbjct: 615 aacgtctcctaccccatcgtcatcgacc 642
>gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestivum cDNA clone wia1c.pk003.h2 5'
end, mRNA sequence
Length = 572
Score = 151 bits (76), Expect = 7e-035
Identities = 148/172 (86%)
Strand = Plus / Plus
Query: 269 cgacgtcgtcttcaagaacatccacggcacctccaacacgccggaggccatcacgctcaa 328
|||| ||||||||||||||||| ||| || || |||||||||||| ||||||||||
Sbjct: 173 cgacatcgtcttcaagaacatcgtcgggacgtcggcgacgccggaggccgtcacgctcaa 232
Query: 329 ctgcgccaacaacctgccctgccagggcgtgcagctcatcaacgtcgacatcaagtacaa 388
||||| ||||||| |||||||||||||| | |||||| |||||||| || |||||||||
Sbjct: 233 ctgcgtcaacaacgtgccctgccagggcctccagctcgtcaacgtcaacctcaagtacac 292
Query: 389 caggtccgacaacaagaccatgtccgtctgcaagaacgccatcggcaagtcc 440
| | || |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 293 cggcaccaacaacaagaccatggccgtctgcaagaacgccgtcggcaagtcc 344
Score = 103 bits (52), Expect = 1e-020
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 94 ccaccaacggcctgcgcatcaagtcgtacgaggactccaagtcgtcgctcaaggccacca 153
|||||||||| || || ||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 150 ccaccaacgggctccggatcaagtcgtacgaggactccaagtcggcgctccgggccaccc 91
Query: 154 agttcctgtaccaggacgtcaccatggacaacgtctcctaccccatcatcatagaccaga 213
||| ||||| | ||||| | |||||||||||||||||||||||| |||| |||||||
Sbjct: 90 gcttcgtgtacgacgacgtgaggatggacaacgtctcctaccccatcgtcatcgaccaga 31
Score = 52.0 bits (26), Expect = 5e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 210 cagaagtactgccccaacaacatctg 235
||||||||||||||||||||||||||
Sbjct: 9 cagaagtactgccccaacaacatctg 34
>gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_C03_F05, mRNA sequence
Length = 649
Score = 151 bits (76), Expect = 7e-035
Identities = 148/172 (86%)
Strand = Plus / Minus
Query: 269 cgacgtcgtcttcaagaacatccacggcacctccaacacgccggaggccatcacgctcaa 328
|||| ||||||||||||||||| ||| || || |||||||||||| ||||||||||
Sbjct: 406 cgacatcgtcttcaagaacatcgtcgggacgtcggcgacgccggaggccgtcacgctcaa 347
Query: 329 ctgcgccaacaacctgccctgccagggcgtgcagctcatcaacgtcgacatcaagtacaa 388
||||| ||||||| |||||||||||||| | |||||| |||||||| || |||||||||
Sbjct: 346 ctgcgtcaacaacgtgccctgccagggcctccagctcgtcaacgtcaacctcaagtacac 287
Query: 389 caggtccgacaacaagaccatgtccgtctgcaagaacgccatcggcaagtcc 440
| | || |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 286 cggcaccaacaacaagaccatggccgtctgcaagaacgccgtcggcaagtcc 235
>gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11d16 3', mRNA sequence
Length = 337
Score = 149 bits (75), Expect = 3e-034
Identities = 120/135 (88%)
Strand = Plus / Minus
Query: 306 acgccggaggccatcacgctcaactgcgccaacaacctgccctgccagggcgtgcagctc 365
|||||||||||| ||||||||||||||| ||||||| |||||||||||||| | ||||||
Sbjct: 336 acgccggaggccgtcacgctcaactgcgtcaacaacgtgccctgccagggcctccagctc 277
Query: 366 atcaacgtcgacatcaagtacaacaggtccgacaacaagaccatgtccgtctgcaagaac 425
|||||||| || ||||||||| | | || |||||||||||||| ||||||||||||||
Sbjct: 276 gtcaacgtcaacctcaagtacaccggcaccaacaacaagaccatggccgtctgcaagaac 217
Query: 426 gccatcggcaagtcc 440
||| |||||||||||
Sbjct: 216 gccgtcggcaagtcc 202
>gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 5', mRNA sequence
Length = 600
Score = 125 bits (63), Expect = 4e-027
Identities = 117/135 (86%)
Strand = Plus / Plus
Query: 3 ggccacggcatcagcgtcggcagcctggggcggtacaaggacgagaaggacgtggaggac 62
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggccacgggatcagcgtgggcagcctggggcggtacaaggacgagaaggacgtggaggac 521
Query: 63 gtgaaggtgacggggtgcacgctcgccggcaccaccaacggcctgcgcatcaagtcgtac 122
| ||||||| ||||| || ||| |||||||||| || || ||||||||||||
Sbjct: 522 atccaggtgaccaactgcaccatcaagggcgccaccaacgggctccggatcaagtcgtac 581
Query: 123 gaggactccaagtcg 137
|||||||||||||||
Sbjct: 582 gaggactccaagtcg 596
>gb|BQ902457.1|BQ902457 Ta02_02g09_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_02g09, mRNA
sequence
Length = 276
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 397 acaacaagaccatgtccgtctgcaagaacgccatcggcaagtcc 440
|||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 264 acaacaagaccatggccgtctgcaagaacgccgtcggcacgtcc 221
>gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3i08 3', mRNA sequence
Length = 583
Score = 61.9 bits (31), Expect = 5e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 191 ctaccccatcatcatagaccagaagtactgccccaacaa 229
||||||||| ||||| |||||||||||||||||||||||
Sbjct: 535 ctaccccattatcatcgaccagaagtactgccccaacaa 497
>gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_A04_B08, mRNA sequence
Length = 710
Score = 61.9 bits (31), Expect = 5e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 191 ctaccccatcatcatagaccagaagtactgccccaacaa 229
|||||| |||||||| |||||||||||||||||||||||
Sbjct: 655 ctacccgatcatcatcgaccagaagtactgccccaacaa 617
>gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2334_A09_A18, mRNA sequence
Length = 488
Score = 58.0 bits (29), Expect = 8e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 3 ggccacggcatcagcgtcggcagcctggggcgg 35
||||||||||||||| |||||||||||||||||
Sbjct: 273 ggccacggcatcagcatcggcagcctggggcgg 305
>gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivum cDNA clone OV102E15, mRNA
sequence
Length = 693
Score = 58.0 bits (29), Expect = 8e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 3 ggccacggcatcagcgtcggcagcctggggcgg 35
||||||||||||||| |||||||||||||||||
Sbjct: 141 ggccacggcatcagcatcggcagcctggggcgg 173
>gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivum cDNA clone OV102K13, mRNA
sequence
Length = 695
Score = 58.0 bits (29), Expect = 8e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 3 ggccacggcatcagcgtcggcagcctggggcgg 35
||||||||||||||| |||||||||||||||||
Sbjct: 141 ggccacggcatcagcatcggcagcctggggcgg 173
>gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2329_A04_A07, mRNA sequence
Length = 619
Score = 54.0 bits (27), Expect = 1e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 193 accccatcatcatagaccagaagtactgccc 223
||||||||||||| |||||||||||||||||
Sbjct: 496 accccatcatcatcgaccagaagtactgccc 466
>gb|CZ889985.1|CZ889985 gy41b11.x1.b.screen Bread wheat methylation unfiltered library
(Bread_Wheat_U) Triticum aestivum genomic, DNA sequence
Length = 225
Score = 52.0 bits (26), Expect = 5e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 194 ccccatcatcatagaccagaagtactgccc 223
|||||||||||| |||||||||||||||||
Sbjct: 114 ccccatcatcatcgaccagaagtactgccc 143
>gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh12d18 3', mRNA sequence
Length = 686
Score = 52.0 bits (26), Expect = 5e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 194 ccccatcatcatagaccagaagtactgccc 223
|||||||||||| |||||||||||||||||
Sbjct: 412 ccccatcatcatcgaccagaagtactgccc 383
>gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh25d18 3', mRNA sequence
Length = 557
Score = 52.0 bits (26), Expect = 5e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 194 ccccatcatcatagaccagaagtactgccc 223
|||||||||||| |||||||||||||||||
Sbjct: 285 ccccatcatcatcgaccagaagtactgccc 256
>gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh27l09 3', mRNA sequence
Length = 677
Score = 52.0 bits (26), Expect = 5e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 194 ccccatcatcatagaccagaagtactgccc 223
|||||||||||| |||||||||||||||||
Sbjct: 410 ccccatcatcatcgaccagaagtactgccc 381
>gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 690
Score = 48.1 bits (24), Expect = 7e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 81 acgctcgccggcaccaccaacggcctgcgcatcaagtcgt 120
||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 428 acgctcgccgggacgaccaacgggctgcggatcaagtcgt 467
>gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 591
Score = 48.1 bits (24), Expect = 7e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 81 acgctcgccggcaccaccaacggcctgcgcatcaagtcgt 120
||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 522 acgctcgccgggacgaccaacgggctgcggatcaagtcgt 483
>gb|AL811841.1|AL811841 AL811841 d:15 Triticum aestivum cDNA clone B03_d15_plate_17, mRNA
sequence
Length = 430
Score = 48.1 bits (24), Expect = 7e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 81 acgctcgccggcaccaccaacggcctgcgcatcaagtcgt 120
||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 215 acgctcgccgggacgaccaacgggctgcggatcaagtcgt 254
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 165,339
Number of Sequences: 636343
Number of extensions: 165339
Number of successful extensions: 46628
Number of sequences better than 0.5: 26
Number of HSP's better than 0.5 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46540
Number of HSP's gapped (non-prelim): 69
length of query: 642
length of database: 367,240,239
effective HSP length: 19
effective length of query: 623
effective length of database: 355,149,722
effective search space: 221258276806
effective search space used: 221258276806
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)