BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071743.2.1
(586 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE419425.1|BE419425 WWS01.H4R000101 ITEC WWS Wheat Scute... 86 3e-015
gb|BE591320.1|BE591320 WHE1655-1658_A16_A16ZS Wheat heat st... 86 3e-015
gb|BQ806133.1|BQ806133 WHE3575_B11_C21ZS Wheat developing g... 86 3e-015
gb|CA650533.1|CA650533 wre1n.pk0153.d4 wre1n Triticum aesti... 86 3e-015
gb|CA658052.1|CA658052 wlm0.pk040.k4 wlm0 Triticum aestivum... 78 8e-013
gb|BJ322687.1|BJ322687 BJ322687 Y. Ogihara unpublished cDNA... 76 3e-012
gb|BJ268397.1|BJ268397 BJ268397 Y. Ogihara unpublished cDNA... 70 2e-010
gb|BU099291.1|BU099291 WHE3305_G09_M17ZS Chinese Spring whe... 70 2e-010
gb|CA603333.1|CA603333 wr1.pk0027.d7 wr1 Triticum aestivum ... 70 2e-010
gb|AJ610118.1|AJ610118 AJ610118 Triticum turgidum subsp. du... 70 2e-010
gb|AY625680.1| Triticum aestivum MYB transcription factor (... 70 2e-010
gb|BE492841.1|BE492841 WHE0565_E08_E08ZE Triticum monococcu... 68 7e-010
gb|CA640294.1|CA640294 wre1n.pk0034.e9 wre1n Triticum aesti... 68 7e-010
gb|CD939474.1|CD939474 OV.113L19F010313 OV Triticum aestivu... 68 7e-010
gb|BJ224997.1|BJ224997 BJ224997 Y. Ogihara unpublished cDNA... 62 5e-008
gb|CD861681.1|CD861681 AZO1.003E22F010109 AZO1 Triticum aes... 60 2e-007
gb|DR736518.1|DR736518 FGAS081888 Triticum aestivum FGAS: L... 60 2e-007
gb|BE499052.1|BE499052 WHE0960_G10_M20ZS Wheat pre-anthesis... 56 3e-006
gb|CA499356.1|CA499356 WHE4006_D10_G20ZT Wheat meiotic anth... 56 3e-006
gb|CK164509.1|CK164509 FGAS048422 Triticum aestivum FGAS: T... 56 3e-006
gb|CK167602.1|CK167602 FGAS052001 Triticum aestivum FGAS: T... 56 3e-006
gb|DR733072.1|DR733072 FGAS077327 Triticum aestivum FGAS: T... 56 3e-006
gb|DR733107.1|DR733107 FGAS077362 Triticum aestivum FGAS: T... 56 3e-006
gb|DR733110.1|DR733110 FGAS077365 Triticum aestivum FGAS: T... 56 3e-006
gb|DR733119.1|DR733119 FGAS077374 Triticum aestivum FGAS: T... 56 3e-006
gb|DR733120.1|DR733120 FGAS077375 Triticum aestivum FGAS: T... 56 3e-006
gb|DR733122.1|DR733122 FGAS077377 Triticum aestivum FGAS: T... 56 3e-006
gb|DR736884.1|DR736884 FGAS082254 Triticum aestivum FGAS: L... 54 1e-005
gb|BQ239372.1|BQ239372 TaE05031G10R TaE05 Triticum aestivum... 52 4e-005
gb|CD934967.1|CD934967 OV.002H19F010109 OV Triticum aestivu... 52 4e-005
gb|CD907504.1|CD907504 G468.107C18F010814 G468 Triticum aes... 50 2e-004
gb|CK207282.1|CK207282 FGAS018901 Triticum aestivum FGAS: L... 50 2e-004
gb|CK208364.1|CK208364 FGAS020074 Triticum aestivum FGAS: L... 46 0.003
gb|CA498340.1|CA498340 WHE3242_B12_C24ZT Wheat meiotic anth... 42 0.042
>gb|BE419425.1|BE419425 WWS01.H4R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS01.H4, mRNA sequence
Length = 607
Score = 85.7 bits (43), Expect = 3e-015
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 486 tgaaaaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaattta 545
||||||||| |||||||| ||||||||||| || ||||| || || ||| | ||||| ||
Sbjct: 356 tgaaaaagctactcccaagggtgtgctgaagcttatgaaagttgacggtttgacaatata 415
Query: 546 tcatgtgaagagccatctgcagaagta 572
||||||||| |||||||||||||||||
Sbjct: 416 tcatgtgaaaagccatctgcagaagta 442
>gb|BE591320.1|BE591320 WHE1655-1658_A16_A16ZS Wheat heat stressed flag leaf cDNA library
Triticum aestivum cDNA clone WHE1655-1658_A16_A16, mRNA
sequence
Length = 521
Score = 85.7 bits (43), Expect = 3e-015
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 486 tgaaaaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaattta 545
||||||||| |||||||| ||||||||||| || ||||| || || ||| | ||||| ||
Sbjct: 414 tgaaaaagctactcccaagggtgtgctgaagcttatgaaagttgacggtttgacaatata 473
Query: 546 tcatgtgaagagccatctgcagaagta 572
||||||||| |||||||||||||||||
Sbjct: 474 tcatgtgaaaagccatctgcagaagta 500
>gb|BQ806133.1|BQ806133 WHE3575_B11_C21ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3575_B11_C21, mRNA sequence
Length = 756
Score = 85.7 bits (43), Expect = 3e-015
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 486 tgaaaaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaattta 545
||||||||| |||||||| ||||||||||| || ||||| || || ||| | ||||| ||
Sbjct: 382 tgaaaaagctactcccaagggtgtgctgaagcttatgaaagttgacggtttgacaatata 441
Query: 546 tcatgtgaagagccatctgcagaagta 572
||||||||| |||||||||||||||||
Sbjct: 442 tcatgtgaaaagccatctgcagaagta 468
>gb|CA650533.1|CA650533 wre1n.pk0153.d4 wre1n Triticum aestivum cDNA clone wre1n.pk0153.d4
5' end, mRNA sequence
Length = 507
Score = 85.7 bits (43), Expect = 3e-015
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 486 tgaaaaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaattta 545
||||||||| |||||||| ||||||||||| || ||||| || || ||| | ||||| ||
Sbjct: 75 tgaaaaagctactcccaagggtgtgctgaagcttatgaaagttgacggtttgacaatata 134
Query: 546 tcatgtgaagagccatctgcagaagta 572
||||||||| |||||||||||||||||
Sbjct: 135 tcatgtgaaaagccatctgcagaagta 161
>gb|CA658052.1|CA658052 wlm0.pk040.k4 wlm0 Triticum aestivum cDNA clone wlm0.pk040.k4 5'
end, mRNA sequence
Length = 449
Score = 77.8 bits (39), Expect = 8e-013
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 486 tgaaaaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaattta 545
||||||||| |||||||| ||||| ||||| || ||||| || || ||| | ||||| ||
Sbjct: 12 tgaaaaagctactcccaagggtgtcctgaagcttatgaaagttgatggtttgacaatata 71
Query: 546 tcatgtgaagagccatctgcagaagta 572
||||||||| |||||||||||||||||
Sbjct: 72 tcatgtgaaaagccatctgcagaagta 98
>gb|BJ322687.1|BJ322687 BJ322687 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf26i22 3', mRNA sequence
Length = 689
Score = 75.8 bits (38), Expect = 3e-012
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 487 gaaaaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaatttat 546
|||||||| |||||||| ||||||||||| || ||||| || || ||| | ||||| |||
Sbjct: 608 gaaaaagctactcccaagggtgtgctgaagcttatgaaagttgacggtttgacaatatat 667
Query: 547 catgtgaagagccatctgcaga 568
|||||||| |||||||||||||
Sbjct: 668 catgtgaaaagccatctgcaga 689
>gb|BJ268397.1|BJ268397 BJ268397 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh16m19 5', mRNA sequence
Length = 400
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 538 acaatttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 340 acaatttatcacgtgaagagccatttgcagaagtatcgccttgcaaa 386
>gb|BU099291.1|BU099291 WHE3305_G09_M17ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3305_G09_M17,
mRNA sequence
Length = 761
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 538 acaatttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 358 acaatttatcacgtgaagagccatttgcagaagtatcgccttgcaaa 404
>gb|CA603333.1|CA603333 wr1.pk0027.d7 wr1 Triticum aestivum cDNA clone wr1.pk0027.d7 5'
end, mRNA sequence
Length = 526
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 538 acaatttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 60 acaatttatcacgtgaagagccatttgcagaagtatcgccttgcaaa 106
>gb|AJ610118.1|AJ610118 AJ610118 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 01417R, mRNA
sequence
Length = 421
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 538 acaatttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 124 acaatttatcacgtgaagagccatttgcagaagtatcgccttgcaaa 170
>gb|AY625680.1| Triticum aestivum MYB transcription factor (MYB80) mRNA, complete
cds
Length = 1199
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 538 acaatttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 322 acaatttatcacgtgaagagccatttgcagaagtatcgccttgcaaa 368
>gb|BE492841.1|BE492841 WHE0565_E08_E08ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0565_E08_E08, mRNA
sequence
Length = 402
Score = 67.9 bits (34), Expect = 7e-010
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 503 aaggtgtgctgaaactaatgaaggtagaaggtctaacaatttatcatgtgaagagccatc 562
||||||||||||| || ||||| || || ||| | ||||| ||||||||||| |||||||
Sbjct: 213 aaggtgtgctgaagcttatgaaagttgacggtttgacaatatatcatgtgaaaagccatc 272
Query: 563 tgcagaagta 572
||||||||||
Sbjct: 273 tgcagaagta 282
>gb|CA640294.1|CA640294 wre1n.pk0034.e9 wre1n Triticum aestivum cDNA clone wre1n.pk0034.e9
5' end, mRNA sequence
Length = 543
Score = 67.9 bits (34), Expect = 7e-010
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 538 acaatttatcatgtgaagagccatctgcagaagtatcggcttgcaa 583
||||||||||| |||||||||||| ||||||||||||| |||||||
Sbjct: 35 acaatttatcacgtgaagagccatttgcagaagtatcgccttgcaa 80
>gb|CD939474.1|CD939474 OV.113L19F010313 OV Triticum aestivum cDNA clone OV113L19, mRNA
sequence
Length = 694
Score = 67.9 bits (34), Expect = 7e-010
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 472 aagcttgaaggtcctgaaaaagcaactcccaaaggtgtgctgaaactaatgaaggtagaa 531
||||| ||||| ||||| |||||||||||||| || || ||||| || ||||| || |||
Sbjct: 3 aagctcgaaggacctgacaaagcaactcccaagggcgttctgaagcttatgaaagtggaa 62
Query: 532 ggtctaacaatttatcatgtgaagagccatctgcagaagtatcggc 577
|| || || ||||| ||||| ||||| ||| |||||||||| ||||
Sbjct: 63 ggcctcaccatttaccatgtaaagagtcatttgcagaagtaccggc 108
>gb|BJ224997.1|BJ224997 BJ224997 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl20d01 5', mRNA sequence
Length = 694
Score = 61.9 bits (31), Expect = 5e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 cctttcctgcctcacccccctaagtgtgagcagcaggtt 51
||||||||||||||||| ||||||| |||||||||||||
Sbjct: 566 cctttcctgcctcaccctcctaagtatgagcagcaggtt 604
>gb|CD861681.1|CD861681 AZO1.003E22F010109 AZO1 Triticum aestivum cDNA clone AZO1003E22,
mRNA sequence
Length = 694
Score = 60.0 bits (30), Expect = 2e-007
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 491 aagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaatttatcatg 550
|||| |||||||| ||||| ||||| || ||||| || || ||| | ||||| |||||||
Sbjct: 555 aagctactcccaagggtgtcctgaagcttatgaaagttgatggtttgacaatatatcatg 614
Query: 551 tgaagagccatctgcagaagta 572
|||| |||||||||| ||||||
Sbjct: 615 tgaaaagccatctgctgaagta 636
>gb|DR736518.1|DR736518 FGAS081888 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1050
Score = 60.0 bits (30), Expect = 2e-007
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 486 tgaaaaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaattta 545
||||||||||||||| |||| || | |||| | |||||||| ||||| ||||| || ||
Sbjct: 391 tgaaaaagcaactccaaaagcagtccagaaagttatgaaggttgaagggctaactatata 450
Query: 546 tcatgtgaagagccatctgcagaagtatcg 575
||||| || |||||||| |||||||||||
Sbjct: 451 ccatgtaaaaagccatctacagaagtatcg 480
>gb|BE499052.1|BE499052 WHE0960_G10_M20ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0960_G10_M20, mRNA sequence
Length = 470
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 380 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 423
>gb|CA499356.1|CA499356 WHE4006_D10_G20ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4006_D10_G20, mRNA sequence
Length = 598
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 516 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 559
>gb|CK164509.1|CK164509 FGAS048422 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 895
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 546 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 589
>gb|CK167602.1|CK167602 FGAS052001 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1190
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 488 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 531
>gb|DR733072.1|DR733072 FGAS077327 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1072
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 501 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 544
>gb|DR733107.1|DR733107 FGAS077362 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1167
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 489 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 532
>gb|DR733110.1|DR733110 FGAS077365 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1147
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 488 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 531
>gb|DR733119.1|DR733119 FGAS077374 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1129
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 497 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 540
>gb|DR733120.1|DR733120 FGAS077375 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1173
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 488 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 531
>gb|DR733122.1|DR733122 FGAS077377 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1106
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaa 584
||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 494 atttatcatgtcaaaagtcatctgcagaaatatcggcttgcaaa 537
>gb|DR736884.1|DR736884 FGAS082254 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1146
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 cctttcctgcctcacccccctaagtgtgagcagcaggtt 51
||||||||||||||||| || |||| |||||||||||||
Sbjct: 328 cctttcctgcctcaccctcccaagtatgagcagcaggtt 366
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 490 aaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaatttatcat 549
|||||||||||||| || || ||||| || ||||| || ||||| || || || || |||
Sbjct: 451 aaagcaactcccaagggcgttctgaagcttatgaaagtggaaggcctgaccatctaccat 510
Query: 550 gtgaagagccatctgcagaagta 572
|| ||||| ||| ||||||||||
Sbjct: 511 gtaaagagtcatttgcagaagta 533
>gb|BQ239372.1|BQ239372 TaE05031G10R TaE05 Triticum aestivum cDNA clone TaE05031G10R, mRNA
sequence
Length = 594
Score = 52.0 bits (26), Expect = 4e-005
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaaat 586
||||||||||| || || ||||| ||||| ||||||||||||||||
Sbjct: 461 atttatcatgtcaaaagtcatctccagaaatatcggcttgcaaaat 506
>gb|CD934967.1|CD934967 OV.002H19F010109 OV Triticum aestivum cDNA clone OV002H19, mRNA
sequence
Length = 714
Score = 52.0 bits (26), Expect = 4e-005
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 541 atttatcatgtgaagagccatctgcagaagtatcggcttgcaaaat 586
||||||||||| || || ||||| ||||| ||||||||||||||||
Sbjct: 449 atttatcatgtcaaaagtcatctccagaaatatcggcttgcaaaat 494
>gb|CD907504.1|CD907504 G468.107C18F010814 G468 Triticum aestivum cDNA clone G468107C18,
mRNA sequence
Length = 715
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 425 tgaggtggacacttgagcttcatgagcgttttgtgga 461
|||||||||| | ||| ||||||||||||||||||||
Sbjct: 475 tgaggtggactcctgaacttcatgagcgttttgtgga 511
>gb|CK207282.1|CK207282 FGAS018901 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1153
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 425 tgaggtggacacttgagcttcatgagcgttttgtgga 461
|||||||||| | ||| ||||||||||||||||||||
Sbjct: 311 tgaggtggactcctgaacttcatgagcgttttgtgga 347
>gb|CK208364.1|CK208364 FGAS020074 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 490 aaagcaactcccaaaggtgtgctgaaactaatgaaggtagaaggtctaacaatttatcat 549
|||||||||||||| || || ||||| || ||||| || ||||| || || || || |||
Sbjct: 724 aaagcaactcccaagggcgttctgaagcttatgaaagtggaaggcctgaccatctaccat 665
Query: 550 gtgaagagccatctgcagaagta 572
|| ||||| ||| ||||||||||
Sbjct: 664 gtaaagagtcatttgcagaagta 642
>gb|CA498340.1|CA498340 WHE3242_B12_C24ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3242_B12_C24, mRNA sequence
Length = 739
Score = 42.1 bits (21), Expect = 0.042
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 547 catgtgaagagccatctgcagaagtatcg 575
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Sbjct: 377 catgtgaagagccatctccagatgtatcg 405
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 101,616
Number of Sequences: 636343
Number of extensions: 101616
Number of successful extensions: 23841
Number of sequences better than 0.5: 34
Number of HSP's better than 0.5 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23791
Number of HSP's gapped (non-prelim): 50
length of query: 586
length of database: 367,240,239
effective HSP length: 19
effective length of query: 567
effective length of database: 355,149,722
effective search space: 201369892374
effective search space used: 201369892374
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)