BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3067043.2.1
(834 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD491001.1|CD491001 WHE3070_A02_B04ZT CS wheat cold-stre... 646 0.0
gb|CV774990.1|CV774990 FGAS069391 Triticum aestivum FGAS: L... 329 2e-088
gb|CV776875.1|CV776875 FGAS071279 Triticum aestivum FGAS: L... 327 7e-088
gb|DR741232.1|DR741232 FGAS001163 Triticum aestivum FGAS: L... 327 7e-088
gb|BT009499.1| Triticum aestivum clone wr1.pk0081.a8:fis, f... 327 7e-088
gb|BE445201.1|BE445201 WHE1133_G02_M03ZS Wheat etiolated se... 315 3e-084
gb|CA603136.1|CA603136 wr1.pk0026.f10 wr1 Triticum aestivum... 313 1e-083
gb|DR741686.1|DR741686 FGAS030736 Triticum aestivum FGAS: L... 307 7e-082
gb|CA607441.1|CA607441 wr1.pk0081.a8 wr1 Triticum aestivum ... 299 2e-079
gb|CD919148.1|CD919148 G608.112E16F010911 G608 Triticum aes... 287 6e-076
gb|CV782447.1|CV782447 FGAS076860 Triticum aestivum FGAS: L... 274 9e-072
gb|CD452846.1|CD452846 WHE1133_G02_M03ZT CS wheat etiolated... 258 5e-067
gb|CA719588.1|CA719588 wkm2n.pk004.g19 wkm2n Triticum aesti... 248 5e-064
gb|BE445961.1|BE445961 WHE1148_H10_P20ZS Wheat etiolated se... 238 5e-061
gb|CD871935.1|CD871935 AZO2.119G19F010207 AZO2 Triticum aes... 72 7e-011
>gb|CD491001.1|CD491001 WHE3070_A02_B04ZT CS wheat cold-stressed seedling subtracted cDNA
library Triticum aestivum cDNA clone WHE3070_A02_B04,
mRNA sequence
Length = 758
Score = 646 bits (326), Expect = 0.0
Identities = 498/556 (89%), Gaps = 17/556 (3%)
Strand = Plus / Minus
Query: 208 atgatggcagctatgcacaaacagttgcactggatttagcgtgtctgcaggttctatcac 267
||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 758 atgatggtaactatgcacaaacagttgcactggattttgcgtgtctgcaggttctatcac 699
Query: 268 aaagaattcatattggtaaatatgttgctgaggtgaagttcaaagacgctcctcaagaat 327
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 698 aaagaattcatattggtaaatatgttgctgaggtcaagttcaaagatgctcctcaagatt 639
Query: 328 atagtcgactaataaaagaaaaggacagcaattctctgatggatatgctgacattcaagg 387
|||||||| ||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 638 atagtcgattaataaaagcaaaggacagcaattctttgatggatctgctgacattcaagg 579
Query: 388 ctgtggaagagaaggtcaagaagagagtagagaagaaggctaggacgttcgggcagaacg 447
|||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 578 ctgtggaagagaaggttaagaagagagtagagaagaaggccaggaccttcgggcagaacg 519
Query: 448 tcaccttggatgacaatgccactgctggtgacagcgagtgcaaggtcgatcccaaagtgc 507
|||||||||| |||||||||||||| |||||||||| ||||||||| |||| |||||||
Sbjct: 518 tcaccttggaggacaatgccactgccagtgacagcgaatgcaaggtcaatcctaaagtgc 459
Query: 508 tctccaagctgtatgatcagtgggtgatgccactgaccaaggatgtcgaagtcgagtatc 567
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 458 tctccaagctgtatgatcagtgggtaatgccactgaccaaggacgtcgaagtcgagtatc 399
Query: 568 tcctgcgccgcctcgactgatcagtgatcacccgattagctgtagctgcgaactttatgt 627
||||||||||||||||||||||| |||||||||||||||||| || |||||||
Sbjct: 398 tcctgcgccgcctcgactgatca--------ccgattagctgtagctgcaaattttatgt 347
Query: 628 acgcgtgggtttcagtttgctttgcacatgccctttatggctttatcgttcaaactcaac 687
| |||||| |||||||||| | ||| |||| ||||||| |||||||| || |||||||||
Sbjct: 346 atgcgtggttttcagtttgttgtgcccatg-cctttattgctttatctttaaaactcaac 288
Query: 688 ta--------cgagagaacgttaccaggatctggccttcgtctttgtcagcctgcttgcc 739
|| |||||||| |||||||||||||| |||||||| | ||| ||||| || |
Sbjct: 287 tacgactcttcgagagaatattaccaggatctggacttcgtctgtctcatcctgcctgac 228
Query: 740 cgtcatctgcatgagt 755
| |||||| |||||||
Sbjct: 227 catcatcttcatgagt 212
>gb|CV774990.1|CV774990 FGAS069391 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 828
Score = 329 bits (166), Expect = 2e-088
Identities = 365/432 (84%)
Strand = Plus / Plus
Query: 1 gggaagcagaggccctcaacgcaaaggctngacattatcaaaagccagaagatgttccat 60
||||||| |||| ||| |||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 164 gggaagccgaggtcctgcacgccaaggctggacactatcaaaagccagaagatgttccat 223
Query: 61 tcttccctcaagatctaccctcacctctctttcctacaaagccttccccaaaggtcttgc 120
||||| |||||||||| || ||||| |||||||||| || | ||||||||| ||||
Sbjct: 224 tcttctctcaagatcttccaccacctgtctttcctaccaaaggtcgcccaaaggttttgc 283
Query: 121 acccttttgcttcattggtcaccgtgaatgatgcaatatggaaaatgtattttgatgaat 180
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 284 acccttttgcttcattggtctgtgtgaatgatgcaatatggaagatgtatttcaatgaat 343
Query: 181 tgctcccgttattcactgttgatggtgatgatggcagctatgcacaaacagttgcactgg 240
|||| || |||||||||| ||||| |||||||||| ||||||| ||||||||||| | |
Sbjct: 344 tgctaccattattcactgcggatggcgatgatggcaactatgcagaaacagttgcattag 403
Query: 241 atttagcgtgtctgcaggttctatcacaaagaattcatattggtaaatatgttgctgagg 300
|||| || |||||||||| ||| ||| |||||||||| ||| ||||||||||||||||
Sbjct: 404 attttgcatgtctgcaggctctctcaagaagaattcattgtggcaaatatgttgctgagg 463
Query: 301 tgaagttcaaagacgctcctcaagaatatagtcgactaataaaagaaaaggacagcaatt 360
|||| ||||||||||| |||||||| ||||| | || |||| | ||||||| |||
Sbjct: 464 tgaaattcaaagacgcgcctcaagattatagcccaccaatacgtgctaaggacactaatg 523
Query: 361 ctctgatggatatgctgacattcaaggctgtggaagagaaggtcaagaagagagtagaga 420
|||||||| | | || || |||| |||||| ||||| ||||||||||||||||||||||
Sbjct: 524 ctctgatgaacttactaacgttcacggctgttgaaganaaggtcaagaagagagtagaga 583
Query: 421 agaaggctagga 432
||||||| ||||
Sbjct: 584 agaaggcaagga 595
>gb|CV776875.1|CV776875 FGAS071279 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 845
Score = 327 bits (165), Expect = 7e-088
Identities = 365/432 (84%)
Strand = Plus / Plus
Query: 1 gggaagcagaggccctcaacgcaaaggctngacattatcaaaagccagaagatgttccat 60
||||||| |||| ||| |||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 164 gggaagccgaggtcctgcacgccaaggctggacactatcaaaagccagaagatgttccat 223
Query: 61 tcttccctcaagatctaccctcacctctctttcctacaaagccttccccaaaggtcttgc 120
||||| |||||||||| || ||||| |||||||||| || | ||||||||| ||||
Sbjct: 224 tcttctctcaagatcttccaccacctgtctttcctaccaaaggtcgcccaaaggttttgc 283
Query: 121 acccttttgcttcattggtcaccgtgaatgatgcaatatggaaaatgtattttgatgaat 180
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 284 acccttttgcttcattggtctgtgtgaatgatgcaatatggaagatgtatttcaatgaat 343
Query: 181 tgctcccgttattcactgttgatggtgatgatggcagctatgcacaaacagttgcactgg 240
|||| || |||||||||| ||||| |||||||||| ||||||| ||||||||||| | |
Sbjct: 344 tgctaccattattcactgcggatggcgatgatggcaactatgcagaaacagttgcattag 403
Query: 241 atttagcgtgtctgcaggttctatcacaaagaattcatattggtaaatatgttgctgagg 300
|||| || |||||||||| ||| ||| |||||||||| ||| ||||||||||||||||
Sbjct: 404 attttgcatgtctgcaggctctctcaagaagaattcattgtggcaaatatgttgctgagg 463
Query: 301 tgaagttcaaagacgctcctcaagaatatagtcgactaataaaagaaaaggacagcaatt 360
|||| ||||||||||| |||||||| ||||| | || |||| | ||||||| |||
Sbjct: 464 tgaaattcaaagacgcgcctcaagattatagcccaccaatacgtgctaaggacactaatg 523
Query: 361 ctctgatggatatgctgacattcaaggctgtggaagagaaggtcaagaagagagtagaga 420
|||||||| | | || || |||| |||||| ||||| ||||||||||||||||||||||
Sbjct: 524 ctctgatgaacttactaacgttcacggctgttgaagaaaaggtcaagaagagagtagaga 583
Query: 421 agaaggctagga 432
||||||| ||||
Sbjct: 584 agaaggcaagga 595
>gb|DR741232.1|DR741232 FGAS001163 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1056
Score = 327 bits (165), Expect = 7e-088
Identities = 365/432 (84%)
Strand = Plus / Plus
Query: 1 gggaagcagaggccctcaacgcaaaggctngacattatcaaaagccagaagatgttccat 60
||||||| |||| ||| |||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 258 gggaagccgaggtcctgcacgccaaggctggacactatcaaaagccagaagatgttccat 317
Query: 61 tcttccctcaagatctaccctcacctctctttcctacaaagccttccccaaaggtcttgc 120
||||| |||||||||| || ||||| |||||||||| || | ||||||||| ||||
Sbjct: 318 tcttctctcaagatcttccaccacctgtctttcctaccaaaggtcgcccaaaggttttgc 377
Query: 121 acccttttgcttcattggtcaccgtgaatgatgcaatatggaaaatgtattttgatgaat 180
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 378 acccttttgcttcattggtctgtgtgaatgatgcaatatggaagatgtatttcaatgaat 437
Query: 181 tgctcccgttattcactgttgatggtgatgatggcagctatgcacaaacagttgcactgg 240
|||| || |||||||||| ||||| |||||||||| ||||||| ||||||||||| | |
Sbjct: 438 tgctaccattattcactgcggatggcgatgatggcaactatgcagaaacagttgcattag 497
Query: 241 atttagcgtgtctgcaggttctatcacaaagaattcatattggtaaatatgttgctgagg 300
|||| || |||||||||| ||| ||| |||||||||| ||| ||||||||||||||||
Sbjct: 498 attttgcatgtctgcaggctctctcaagaagaattcattgtggcaaatatgttgctgagg 557
Query: 301 tgaagttcaaagacgctcctcaagaatatagtcgactaataaaagaaaaggacagcaatt 360
|||| ||||||||||| |||||||| ||||| | || |||| | ||||||| |||
Sbjct: 558 tgaaattcaaagacgcgcctcaagattatagcccaccaatacgtgctaaggacactaatg 617
Query: 361 ctctgatggatatgctgacattcaaggctgtggaagagaaggtcaagaagagagtagaga 420
|||||||| | | || || |||| |||||| ||||| ||||||||||||||||||||||
Sbjct: 618 ctctgatgaacttactaacgttcacggctgttgaagaaaaggtcaagaagagagtagaga 677
Query: 421 agaaggctagga 432
||||||| ||||
Sbjct: 678 agaaggcaagga 689
>gb|BT009499.1| Triticum aestivum clone wr1.pk0081.a8:fis, full insert mRNA
sequence
Length = 780
Score = 327 bits (165), Expect = 7e-088
Identities = 365/432 (84%)
Strand = Plus / Plus
Query: 1 gggaagcagaggccctcaacgcaaaggctngacattatcaaaagccagaagatgttccat 60
||||||| |||| ||| |||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 23 gggaagccgaggtcctgcacgccaaggctggacactatcaaaagccagaagatgttccat 82
Query: 61 tcttccctcaagatctaccctcacctctctttcctacaaagccttccccaaaggtcttgc 120
||||| |||||||||| || ||||| |||||||||| || | ||||||||| ||||
Sbjct: 83 tcttctctcaagatcttccaccacctgtctttcctaccaaaggtcgcccaaaggttttgc 142
Query: 121 acccttttgcttcattggtcaccgtgaatgatgcaatatggaaaatgtattttgatgaat 180
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 143 acccttttgcttcattggtctgtgtgaatgatgcaatatggaagatgtatttcaatgaat 202
Query: 181 tgctcccgttattcactgttgatggtgatgatggcagctatgcacaaacagttgcactgg 240
|||| || |||||||||| ||||| |||||||||| ||||||| ||||||||||| | |
Sbjct: 203 tgctaccattattcactgcggatggcgatgatggcaactatgcagaaacagttgcattag 262
Query: 241 atttagcgtgtctgcaggttctatcacaaagaattcatattggtaaatatgttgctgagg 300
|||| || |||||||||| ||| ||| |||||||||| ||| ||||||||||||||||
Sbjct: 263 attttgcatgtctgcaggctctctcaagaagaattcattgtggcaaatatgttgctgagg 322
Query: 301 tgaagttcaaagacgctcctcaagaatatagtcgactaataaaagaaaaggacagcaatt 360
|||| ||||||||||| |||||||| ||||| | || |||| | ||||||| |||
Sbjct: 323 tgaaattcaaagacgcgcctcaagattatagcccaccaatacgtgctaaggacactaatg 382
Query: 361 ctctgatggatatgctgacattcaaggctgtggaagagaaggtcaagaagagagtagaga 420
|||||||| | | || || |||| |||||| ||||| ||||||||||||||||||||||
Sbjct: 383 ctctgatgaacttactaacgttcacggctgttgaagaaaaggtcaagaagagagtagaga 442
Query: 421 agaaggctagga 432
||||||| ||||
Sbjct: 443 agaaggcaagga 454
>gb|BE445201.1|BE445201 WHE1133_G02_M03ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1133_G02_M03,
mRNA sequence
Length = 595
Score = 315 bits (159), Expect = 3e-084
Identities = 356/422 (84%)
Strand = Plus / Plus
Query: 1 gggaagcagaggccctcaacgcaaaggctngacattatcaaaagccagaagatgttccat 60
||||||| |||| ||| |||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 174 gggaagccgaggtcctgcacgccaaggctggacactatcaaaagccagaagatgttccat 233
Query: 61 tcttccctcaagatctaccctcacctctctttcctacaaagccttccccaaaggtcttgc 120
||||| |||||||||| || ||||| |||||||||| || | ||||||||| ||||
Sbjct: 234 tcttctctcaagatcttccaccacctgtctttcctaccaaaggtcgcccaaaggttttgc 293
Query: 121 acccttttgcttcattggtcaccgtgaatgatgcaatatggaaaatgtattttgatgaat 180
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 294 acccttttgcttcattggtctgtgtgaatgatgcaatatggaagatgtatttcaatgaat 353
Query: 181 tgctcccgttattcactgttgatggtgatgatggcagctatgcacaaacagttgcactgg 240
|||| || |||||||||| ||||| |||||||||| ||||||| ||||||||||| | |
Sbjct: 354 tgctaccattattcactgcggatggcgatgatggcaactatgcagaaacagttgcattag 413
Query: 241 atttagcgtgtctgcaggttctatcacaaagaattcatattggtaaatatgttgctgagg 300
|||| || |||||||||| ||| ||| |||||||||| ||| ||||||||||||||||
Sbjct: 414 attttgcatgtctgcaggctctctcaagaagaattcattgtggcaaatatgttgctgagg 473
Query: 301 tgaagttcaaagacgctcctcaagaatatagtcgactaataaaagaaaaggacagcaatt 360
|||| ||||||||||| |||||||| ||||| | || |||| | ||||||| |||
Sbjct: 474 tgaaattcaaagacgcgcctcaagattatagcccaccaatacgtgctaaggacactaatg 533
Query: 361 ctctgatggatatgctgacattcaaggctgtggaagagaaggtcaagaagagagtagaga 420
|||||||| | | || || |||| |||||| ||||| ||||||||||||||||||||||
Sbjct: 534 ctctgatgaacttactaacgttcacggctgttgaagaaaaggtcaagaagagagtagaga 593
Query: 421 ag 422
||
Sbjct: 594 ag 595
>gb|CA603136.1|CA603136 wr1.pk0026.f10 wr1 Triticum aestivum cDNA clone wr1.pk0026.f10 5'
end, mRNA sequence
Length = 534
Score = 313 bits (158), Expect = 1e-083
Identities = 341/402 (84%)
Strand = Plus / Plus
Query: 31 gacattatcaaaagccagaagatgttccattcttccctcaagatctaccctcacctctct 90
|||| |||||||||||||||||||||||||||||| |||||||||| || ||||| |||
Sbjct: 1 gacactatcaaaagccagaagatgttccattcttctctcaagatcttccaccacctgtct 60
Query: 91 ttcctacaaagccttccccaaaggtcttgcacccttttgcttcattggtcaccgtgaatg 150
||||||| || | ||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 61 ttcctaccaaaggtcgcccaaaggttttgcacccttttgcttcattggtctgtgtgaatg 120
Query: 151 atgcaatatggaaaatgtattttgatgaattgctcccgttattcactgttgatggtgatg 210
||||||||||||| |||||||| |||||||||| || |||||||||| ||||| ||||
Sbjct: 121 atgcaatatggaagatgtatttcaatgaattgctaccattattcactgcggatggcgatg 180
Query: 211 atggcagctatgcacaaacagttgcactggatttagcgtgtctgcaggttctatcacaaa 270
|||||| ||||||| ||||||||||| | ||||| || |||||||||| ||| ||| ||
Sbjct: 181 atggcaactatgcagaaacagttgcattagattttgcatgtctgcaggctctctcaagaa 240
Query: 271 gaattcatattggtaaatatgttgctgaggtgaagttcaaagacgctcctcaagaatata 330
|||||||| ||| |||||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 241 gaattcattgtggcaaatatgttgctgaggtgaaattcaaagacgcgcctcaagattata 300
Query: 331 gtcgactaataaaagaaaaggacagcaattctctgatggatatgctgacattcaaggctg 390
| | || |||| | ||||||| ||| |||||||| | | || || |||| |||||
Sbjct: 301 gcccaccaatacgtgctaaggacactaatgctctgatgaacttactaacgttcacggctg 360
Query: 391 tggaagagaaggtcaagaagagagtagagaagaaggctagga 432
| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 361 ttgaagaaaaggtcaagaagagagtagagaagaaggcaagga 402
>gb|DR741686.1|DR741686 FGAS030736 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1067
Score = 307 bits (155), Expect = 7e-082
Identities = 349/414 (84%)
Strand = Plus / Plus
Query: 19 acgcaaaggctngacattatcaaaagccagaagatgttccattcttccctcaagatctac 78
|||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 229 acgccaaggctggacactatcaaaagccagaagatgttccattcttctctcaagatcttc 288
Query: 79 cctcacctctctttcctacaaagccttccccaaaggtcttgcacccttttgcttcattgg 138
| ||||| |||||||||| || | ||||||||| ||||||||||||||||||| ||
Sbjct: 289 caccacctgtctttcctaccaaaggtcacccaaaggttttgcacccttttgcttcatcgg 348
Query: 139 tcaccgtgaatgatgcaatatggaaaatgtattttgatgaattgctcccgttattcactg 198
|| |||||||||||||||||||| |||||||| |||||||||| || |||||||| |
Sbjct: 349 tctgtgtgaatgatgcaatatggaagatgtatttcaatgaattgctaccattattcacag 408
Query: 199 ttgatggtgatgatggcagctatgcacaaacagttgcactggatttagcgtgtctgcagg 258
||||| |||||||||| ||||||| ||||||||||| | ||||| || ||||||||||
Sbjct: 409 cggatggcgatgatggcaactatgcagaaacagttgcattagattttgcatgtctgcagg 468
Query: 259 ttctatcacaaagaattcatattggtaaatatgttgctgaggtgaagttcaaagacgctc 318
||| ||| |||||||||| ||| |||||||||||||||||||| ||||||||||| |
Sbjct: 469 ctctctcaagaagaattcattgtggcaaatatgttgctgaggtgaaattcaaagacgcgc 528
Query: 319 ctcaagaatatagtcgactaataaaagaaaaggacagcaattctctgatggatatgctga 378
||||||| ||||| | || |||| | ||||||| |||| |||| ||| | | || |
Sbjct: 529 ctcaagattatagcccaccaatacgtgcgaaggacaccaatgctctaatgaacttactaa 588
Query: 379 cattcaaggctgtggaagagaaggtcaagaagagagtagagaagaaggctagga 432
|||||| ||| || ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 589 cattcacggcagttgaagaaaaggtcaagaagagagtagagaagaaggcaagga 642
>gb|CA607441.1|CA607441 wr1.pk0081.a8 wr1 Triticum aestivum cDNA clone wr1.pk0081.a8 5'
end, mRNA sequence
Length = 579
Score = 299 bits (151), Expect = 2e-079
Identities = 357/425 (84%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 1 gggaagcagaggccctcaacgcaaaggctngacattatcaaaagccagaagatgttccat 60
||||||| |||| ||| |||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 16 gggaagccgaggtcctgcacgccaaggctggacactatcaaaagccagaagatgttccat 75
Query: 61 tcttccctcaagatctaccctcacctctctttcctacaaagccttccccaaaggtcttgc 120
||||| |||||||||| || ||||| |||||||||| || | ||||||||| ||||
Sbjct: 76 tcttctctcaagatcttccaccacctgtctttcctaccaaaggtcgcccaaaggttttgc 135
Query: 121 acccttttgcttcattggtcaccgtgaatgatgcaatatggaaaatgtattttgatgaat 180
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 136 acccttttgcttcattggtctgtgtgaatgatgcaatatggaagatgtatttcaatgaat 195
Query: 181 tgctcccgttattcactgttgatggtgatgatggcagctatgcacaaacagttgcactgg 240
|||| || |||||||||| ||||| |||||||||| ||||||| ||||||||||| | |
Sbjct: 196 tgctaccattattcactgcggatggcgatgatggcaactatgcagaaacagttgcattag 255
Query: 241 atttagcgtgtctgcaggttctatcacaaagaattcatattggtaaatatgttgctgagg 300
|||| || |||||||||| ||| ||| |||||||||| ||| ||||||||||||||||
Sbjct: 256 attttgcatgtctgcaggctctctcaagaagaattcattgtggcaaatatgttgctgagg 315
Query: 301 tgaagttcaaagacgctcctcaagaatatagtcgactaataaaagaaaaggacagcaatt 360
|||| ||||||||||| |||||||| ||||| | || |||| | ||||||| |||
Sbjct: 316 tgaaattcaaagacgcgcctcaagattatagcccaccaatacgtgctaaggacactaatg 375
Query: 361 ctctgatggatatgctgacattcaaggctgtggaagagaaggtcaagaagagagtagaga 420
|||||||| | | || || |||| |||||| ||||| || | |||||||||||||||||
Sbjct: 376 ctctgatgaacttactaacgttcacggctgttgaaga-aaagncaagaagagagtagaga 434
Query: 421 agaag 425
|||||
Sbjct: 435 agaag 439
>gb|CD919148.1|CD919148 G608.112E16F010911 G608 Triticum aestivum cDNA clone G608112E16,
mRNA sequence
Length = 696
Score = 287 bits (145), Expect = 6e-076
Identities = 331/393 (84%)
Strand = Plus / Plus
Query: 40 aaaagccagaagatgttccattcttccctcaagatctaccctcacctctctttcctacaa 99
|||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| |
Sbjct: 12 aaaagccagaagatgttccattcttctctcaagatcttccaccacctgtctttcctacca 71
Query: 100 agccttccccaaaggtcttgcacccttttgcttcattggtcaccgtgaatgatgcaatat 159
| | ||||||||| ||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 72 aaggtcacccaaaggttttgcacccttttgcttcatcggtctgtgtgaatgatgcaatat 131
Query: 160 ggaaaatgtattttgatgaattgctcccgttattcactgttgatggtgatgatggcagct 219
|||| |||||||| |||||||||| || |||||||||| ||||| |||||||||| ||
Sbjct: 132 ggaagatgtatttcaatgaattgctaccattattcactgcggatggcgatgatggcaact 191
Query: 220 atgcacaaacagttgcactggatttagcgtgtctgcaggttctatcacaaagaattcata 279
||||| ||||||||||| | ||||| || |||||||||| ||| ||| ||||||||||
Sbjct: 192 atgcagaaacagttgcattagattttgcatgtctgcaggctctctcaagaagaattcatt 251
Query: 280 ttggtaaatatgttgctgaggtgaagttcaaagacgctcctcaagaatatagtcgactaa 339
||| |||||||||||||||||||| |||| |||||| |||||||| ||||| | || ||
Sbjct: 252 gtggaaaatatgttgctgaggtgaaattcagagacgcacctcaagattatagcccaccaa 311
Query: 340 taaaagaaaaggacagcaattctctgatggatatgctgacattcaaggctgtggaagaga 399
|| | ||||||| |||| |||| ||| | | || ||||||| ||| || ||||| |
Sbjct: 312 tacgtgctaaggacaccaatgctcttatgaacttactaacattcacggcagttgaagaaa 371
Query: 400 aggtcaagaagagagtagagaagaaggctagga 432
|||||||||||||||||||||||||||| ||||
Sbjct: 372 aggtcaagaagagagtagagaagaaggcaagga 404
>gb|CV782447.1|CV782447 FGAS076860 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 274 bits (138), Expect = 9e-072
Identities = 269/313 (85%)
Strand = Plus / Plus
Query: 19 acgcaaaggctngacattatcaaaagccagaagatgttccattcttccctcaagatctac 78
|||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 308 acgccaaggctggacactatcaaaagccagaagatgttccattcttctctcaagatcttc 367
Query: 79 cctcacctctctttcctacaaagccttccccaaaggtcttgcacccttttgcttcattgg 138
| ||||| |||||||||| || | ||||||||| ||||||||||||||||||| ||
Sbjct: 368 caccacctgtctttcctaccaaaggtcacccaaaggttttgcacccttttgcttcatcgg 427
Query: 139 tcaccgtgaatgatgcaatatggaaaatgtattttgatgaattgctcccgttattcactg 198
|| |||||||||||||||||||| |||||||| |||||||||| || |||||||| |
Sbjct: 428 tctgtgtgaatgatgcaatatggaagatgtatttcaatgaattgctaccattattcacag 487
Query: 199 ttgatggtgatgatggcagctatgcacaaacagttgcactggatttagcgtgtctgcagg 258
||||| |||||||||| ||||||| ||||||||||| | ||||| || ||||||||||
Sbjct: 488 cggatggcgatgatggcaactatgcagaaacagttgcattagattttgcatgtctgcagg 547
Query: 259 ttctatcacaaagaattcatattggtaaatatgttgctgaggtgaagttcaaagacgctc 318
||| ||| |||||||||| ||| |||||||||||||||||||| ||||||||||| |
Sbjct: 548 ctctctcaagaagaattcattgtggcaaatatgttgctgaggtgaaattcaaagacgcgc 607
Query: 319 ctcaagaatatag 331
||||||| |||||
Sbjct: 608 ctcaagattatag 620
Score = 44.1 bits (22), Expect = 0.015
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 393 gaagagaaggtcaagaagagagtaga 418
||||| ||||||||||||||||||||
Sbjct: 684 gaagaaaaggtcaagaagagagtaga 709
>gb|CD452846.1|CD452846 WHE1133_G02_M03ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1133_G02_M03,
mRNA sequence
Length = 647
Score = 258 bits (130), Expect = 5e-067
Identities = 277/326 (84%)
Strand = Plus / Minus
Query: 107 cccaaaggtcttgcacccttttgcttcattggtcaccgtgaatgatgcaatatggaaaat 166
||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 617 cccaaaggttttgcacccttttgcttcattggtctgtgtgaatgatgcaatatggaagat 558
Query: 167 gtattttgatgaattgctcccgttattcactgttgatggtgatgatggcagctatgcaca 226
|||||| |||||||||| || |||||||||| ||||| |||||||||| ||||||| |
Sbjct: 557 gtatttcaatgaattgctaccattattcactgcggatggcgatgatggcaactatgcaga 498
Query: 227 aacagttgcactggatttagcgtgtctgcaggttctatcacaaagaattcatattggtaa 286
|||||||||| | ||||| || |||||||||| ||| ||| |||||||||| ||| ||
Sbjct: 497 aacagttgcattagattttgcatgtctgcaggctctctcaagaagaattcattgtggcaa 438
Query: 287 atatgttgctgaggtgaagttcaaagacgctcctcaagaatatagtcgactaataaaaga 346
|||||||||||||||||| ||||||||||| |||||||| ||||| | || |||| |
Sbjct: 437 atatgttgctgaggtgaaattcaaagacgcgcctcaagattatagcccaccaatacgtgc 378
Query: 347 aaaggacagcaattctctgatggatatgctgacattcaaggctgtggaagagaaggtcaa 406
||||||| ||| |||||||| | | || || |||| |||||| ||||| ||||||||
Sbjct: 377 taaggacactaatgctctgatgaacttactaacgttcacggctgttgaagaaaaggtcaa 318
Query: 407 gaagagagtagagaagaaggctagga 432
||||||||||||||||||||| ||||
Sbjct: 317 gaagagagtagagaagaaggcaagga 292
>gb|CA719588.1|CA719588 wkm2n.pk004.g19 wkm2n Triticum aestivum cDNA clone wkm2n.pk004.g19
5' end, mRNA sequence
Length = 480
Score = 248 bits (125), Expect = 5e-064
Identities = 256/300 (85%)
Strand = Plus / Plus
Query: 1 gggaagcagaggccctcaacgcaaaggctngacattatcaaaagccagaagatgttccat 60
||||||| |||| ||| |||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 180 gggaagccgaggtcctgcacgccaaggctggacactatcaaaagccagaagatgttccat 239
Query: 61 tcttccctcaagatctaccctcacctctctttcctacaaagccttccccaaaggtcttgc 120
||||| |||||||||| || ||||| |||||||||| || | ||||||||| ||||
Sbjct: 240 tcttctctcaagatcttccaccacctgtctttcctaccaaaggtcgcccaaaggttttgc 299
Query: 121 acccttttgcttcattggtcaccgtgaatgatgcaatatggaaaatgtattttgatgaat 180
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 300 acccttttgcttcattggtctgtgtgaatgatgcaatatggaagatgtatttcaatgaat 359
Query: 181 tgctcccgttattcactgttgatggtgatgatggcagctatgcacaaacagttgcactgg 240
|||| || |||||||||| ||||| |||||||||| ||||||| ||||||||||| |
Sbjct: 360 tgctaccattattcactgcggatggcgatgatggcaactatgcagaaacagttgcattaa 419
Query: 241 atttagcgtgtctgcaggttctatcacaaagaattcatattggtaaatatgttgctgagg 300
|||| || |||||||||| ||| ||| |||||||||| ||| ||||||||||||||||
Sbjct: 420 attttgcatgtctgcaggctctctcaagaagaattcattgtggcaaatatgttgctgagg 479
>gb|BE445961.1|BE445961 WHE1148_H10_P20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1148_H10_P20,
mRNA sequence
Length = 467
Score = 238 bits (120), Expect = 5e-061
Identities = 239/279 (85%)
Strand = Plus / Plus
Query: 19 acgcaaaggctngacattatcaaaagccagaagatgttccattcttccctcaagatctac 78
|||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 189 acgccaaggctggacactatcaaaagccagaagatgttccattcttctctcaagatcttc 248
Query: 79 cctcacctctctttcctacaaagccttccccaaaggtcttgcacccttttgcttcattgg 138
| ||||| |||||||||| || | ||||||||| ||||||||||||||||||| ||
Sbjct: 249 caccacctgtctttcctaccaaaggtcacccaaaggttttgcacccttttgcttcatcgg 308
Query: 139 tcaccgtgaatgatgcaatatggaaaatgtattttgatgaattgctcccgttattcactg 198
|| |||||||||||||||||||| |||||||| |||||||||| || ||||||||||
Sbjct: 309 tctgtgtgaatgatgcaatatggaagatgtatttcaatgaattgctaccattattcactg 368
Query: 199 ttgatggtgatgatggcagctatgcacaaacagttgcactggatttagcgtgtctgcagg 258
||||| |||||||||| ||||||| ||||||||||| | ||||| || ||||||||||
Sbjct: 369 cggatggcgatgatggcaactatgcagaaacagttgcattagattttgcatgtctgcagg 428
Query: 259 ttctatcacaaagaattcatattggtaaatatgttgctg 297
||| ||| |||||||||| ||| |||||||||||||
Sbjct: 429 ctctctcaagaagaattcattgtggaaaatatgttgctg 467
>gb|CD871935.1|CD871935 AZO2.119G19F010207 AZO2 Triticum aestivum cDNA clone AZO2119G19,
mRNA sequence
Length = 428
Score = 71.9 bits (36), Expect = 7e-011
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 381 ttcaaggctgtggaagagaaggtcaagaagagagtagagaagaaggctagga 432
|||| |||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 78 ttcacggctgttgaagaaaaggtcaagaagagagtagagaagaaggcaagga 129
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 164,311
Number of Sequences: 636343
Number of extensions: 164311
Number of successful extensions: 43520
Number of sequences better than 0.5: 15
Number of HSP's better than 0.5 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43470
Number of HSP's gapped (non-prelim): 37
length of query: 834
length of database: 367,240,239
effective HSP length: 19
effective length of query: 815
effective length of database: 355,149,722
effective search space: 289447023430
effective search space used: 289447023430
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)