BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3064721.2.1
         (689 letters)

Database: Triticum_nucl_with_EST.fasta 
           636,343 sequences; 367,240,239 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BJ292063.1|BJ292063  BJ292063 Y. Ogihara unpublished cDNA...   303   8e-081
gb|BJ298666.1|BJ298666  BJ298666 Y. Ogihara unpublished cDNA...   303   8e-081
gb|BE492753.1|BE492753  WHE0564_D04_D04ZE Triticum monococcu...   295   2e-078
gb|BE492933.1|BE492933  WHE0563_A11_A21ZE Triticum monococcu...   295   2e-078
gb|CA599803.1|CA599803  waw1c.pk004.l9 waw1c Triticum aestiv...   182   2e-044
gb|CD926381.1|CD926381  G750.121O11F010711 G750 Triticum aes...   180   8e-044
gb|CA498726.1|CA498726  WHE3246_H11_O22ZT Wheat meiotic anth...    80   2e-013
gb|BJ214350.1|BJ214350  BJ214350 Y. Ogihara unpublished cDNA...    48   8e-004
gb|BJ221838.1|BJ221838  BJ221838 Y. Ogihara unpublished cDNA...    48   8e-004
gb|BJ266251.1|BJ266251  BJ266251 Y. Ogihara unpublished cDNA...    48   8e-004
gb|BJ266252.1|BJ266252  BJ266252 Y. Ogihara unpublished cDNA...    48   8e-004
gb|BJ266257.1|BJ266257  BJ266257 Y. Ogihara unpublished cDNA...    48   8e-004
gb|CV761089.1|CV761089  FGAS055477 Triticum aestivum FGAS: L...    46   0.003
gb|BE500883.1|BE500883  WHE0991-0994_H16_H16ZS Wheat pre-ant...    40   0.20 
gb|BJ214352.1|BJ214352  BJ214352 Y. Ogihara unpublished cDNA...    40   0.20 
gb|CA497997.1|CA497997  WHE3237_C01_E01ZT Wheat meiotic anth...    40   0.20 
gb|CA498089.1|CA498089  WHE3238_C01_E02ZT Wheat meiotic anth...    40   0.20 
gb|CA498138.1|CA498138  WHE3239_C01_F01ZT Wheat meiotic anth...    40   0.20 
>gb|BJ292063.1|BJ292063 BJ292063 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
           aestivum cDNA clone whsl26d08 5', mRNA sequence
          Length = 650

 Score =  303 bits (153), Expect = 8e-081
 Identities = 316/368 (85%), Gaps = 3/368 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gcttgtggttgggcatatggcatgaacatgtttgatttgtctgggtggagaaagcaaaac 64
           ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 111 gcttgtggttgggcatatggcatgaacatgtttgatttgtccgagtggagaaagcaaaac 170

                                                                       
Query: 65  atcaccgaggtctaccatacctggcagaagttgaatgaaaacaggctattgtggaagcta 124
           |||||||| |||||||| |||||||||||  |||||||| |||||||| | |||||||||
Sbjct: 171 atcaccgacgtctaccacacctggcagaacctgaatgaagacaggctactatggaagcta 230

                                                                       
Query: 125 ggtaccctccctgctggccttgtaaccttctggaaccgcatacgttccctcttgatcgtt 184
           || | ||||||||| |||||||| || || |||||||||  |||||||| |||||||| |
Sbjct: 231 ggcagcctccctgcaggccttgtgacgttttggaaccgc--acgttcccgcttgatcgct 288

                                                                       
Query: 185 cgtggcatcaactagggcttgggtacaacccaaatgtcaacgaaaaggatataaggcgag 244
           |||||||||  || ||||| |||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 289 cgtggcatcttctggggctcgggtacaacccaaacgtcaacgagaaggagatcaggcggg 348

                                                                       
Query: 245 cgacagtcatccacttcaacggaaacttgaagctcctggcttgagattggattgcccaaa 304
           |  | ||||| |||| |||||||||| |||| | ||||||| ||||| |||||| | |||
Sbjct: 349 catccgtcattcactacaacggaaacctgaaac-cctggctcgagatcggattgtcgaaa 407

                                                                       
Query: 305 taccgcaagtactggtcagcacacgtcaattacgaccaagtgtttctacaagagtgcaat 364
           ||||| || ||||||||    || ||||||||||| ||||||||| |||  |||||||| 
Sbjct: 408 taccgaaaatactggtcgcggcatgtcaattacgatcaagtgtttatacgggagtgcaac 467

                   
Query: 365 ataaaccc 372
           ||||||||
Sbjct: 468 ataaaccc 475
>gb|BJ298666.1|BJ298666 BJ298666 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
           aestivum cDNA clone whsl26d08 3', mRNA sequence
          Length = 432

 Score =  303 bits (153), Expect = 8e-081
 Identities = 316/368 (85%), Gaps = 3/368 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gcttgtggttgggcatatggcatgaacatgtttgatttgtctgggtggagaaagcaaaac 64
           ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 378 gcttgtggttgggcatatggcatgaacatgtttgatttgtccgagtggagaaagcaaaac 319

                                                                       
Query: 65  atcaccgaggtctaccatacctggcagaagttgaatgaaaacaggctattgtggaagcta 124
           |||||||| |||||||| |||||||||||  |||||||| |||||||| | |||||||||
Sbjct: 318 atcaccgacgtctaccacacctggcagaacctgaatgaagacaggctactatggaagcta 259

                                                                       
Query: 125 ggtaccctccctgctggccttgtaaccttctggaaccgcatacgttccctcttgatcgtt 184
           || | ||||||||| |||||||| || || |||||||||  |||||||| |||||||| |
Sbjct: 258 ggcagcctccctgcaggccttgtgacgttttggaaccgc--acgttcccgcttgatcgct 201

                                                                       
Query: 185 cgtggcatcaactagggcttgggtacaacccaaatgtcaacgaaaaggatataaggcgag 244
           |||||||||  || ||||| |||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 200 cgtggcatcttctggggctcgggtacaacccaaacgtcaacgagaaggagatcaggcggg 141

                                                                       
Query: 245 cgacagtcatccacttcaacggaaacttgaagctcctggcttgagattggattgcccaaa 304
           |  | ||||| |||| |||||||||| |||| | ||||||| ||||| |||||| | |||
Sbjct: 140 catccgtcattcactacaacggaaacctgaaac-cctggctcgagatcggattgtcgaaa 82

                                                                       
Query: 305 taccgcaagtactggtcagcacacgtcaattacgaccaagtgtttctacaagagtgcaat 364
           ||||| || ||||||||    || ||||||||||| ||||||||| |||  |||||||| 
Sbjct: 81  taccgaaaatactggtcgcggcatgtcaattacgatcaagtgtttatacgggagtgcaac 22

                   
Query: 365 ataaaccc 372
           ||||||||
Sbjct: 21  ataaaccc 14
>gb|BE492753.1|BE492753 WHE0564_D04_D04ZE Triticum monococcum vegetative apex cDNA library
           Triticum monococcum cDNA clone WHE0564_D04_D04, mRNA
           sequence
          Length = 590

 Score =  295 bits (149), Expect = 2e-078
 Identities = 315/368 (85%), Gaps = 3/368 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gcttgtggttgggcatatggcatgaacatgtttgatttgtctgggtggagaaagcaaaac 64
           ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 40  gcttgcggttgggcatatggcatgaacatgtttgatttgtctgagtggagaaagcaaaac 99

                                                                       
Query: 65  atcaccgaggtctaccatacctggcagaagttgaatgaaaacaggctattgtggaagcta 124
           ||||| || |||||||| |||||||||||  |||||||| |||||||| | |||||||||
Sbjct: 100 atcactgacgtctaccacacctggcagaacctgaatgaagacaggctactatggaagcta 159

                                                                       
Query: 125 ggtaccctccctgctggccttgtaaccttctggaaccgcatacgttccctcttgatcgtt 184
           || | ||||||||| |||||||| || ||||||||||||  |||||||| || ||||| |
Sbjct: 160 ggcagcctccctgcaggccttgtgacgttctggaaccgc--acgttccccctcgatcgct 217

                                                                       
Query: 185 cgtggcatcaactagggcttgggtacaacccaaatgtcaacgaaaaggatataaggcgag 244
           ||||||||| | | ||||| |||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 218 cgtggcatctattggggctcgggtacaacccaaacgtcaacgagaaggagatcaggcggg 277

                                                                       
Query: 245 cgacagtcatccacttcaacggaaacttgaagctcctggcttgagattggattgcccaaa 304
           |  | ||||| |||| |||||||||| |||||| ||||||||||||| ||  || | |||
Sbjct: 278 catccgtcattcactacaacggaaacctgaagc-cctggcttgagatcgggctgtcgaaa 336

                                                                       
Query: 305 taccgcaagtactggtcagcacacgtcaattacgaccaagtgtttctacaagagtgcaat 364
           ||||| || ||||||||    || ||||||||||| ||||||||| |||  |||||||| 
Sbjct: 337 taccgaaaatactggtcgcggcatgtcaattacgatcaagtgtttatacgggagtgcaac 396

                   
Query: 365 ataaaccc 372
           ||||||||
Sbjct: 397 ataaaccc 404
>gb|BE492933.1|BE492933 WHE0563_A11_A21ZE Triticum monococcum vegetative apex cDNA library
           Triticum monococcum cDNA clone WHE0563_A11_A21, mRNA
           sequence
          Length = 522

 Score =  295 bits (149), Expect = 2e-078
 Identities = 315/368 (85%), Gaps = 3/368 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gcttgtggttgggcatatggcatgaacatgtttgatttgtctgggtggagaaagcaaaac 64
           ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 41  gcttgcggttgggcatatggcatgaacatgtttgatttgtctgagtggagaaagcaaaac 100

                                                                       
Query: 65  atcaccgaggtctaccatacctggcagaagttgaatgaaaacaggctattgtggaagcta 124
           ||||| || |||||||| |||||||||||  |||||||| |||||||| | |||||||||
Sbjct: 101 atcactgacgtctaccacacctggcagaacctgaatgaagacaggctactatggaagcta 160

                                                                       
Query: 125 ggtaccctccctgctggccttgtaaccttctggaaccgcatacgttccctcttgatcgtt 184
           || | ||||||||| |||||||| || ||||||||||||  |||||||| || ||||| |
Sbjct: 161 ggcagcctccctgcaggccttgtgacgttctggaaccgc--acgttccccctcgatcgct 218

                                                                       
Query: 185 cgtggcatcaactagggcttgggtacaacccaaatgtcaacgaaaaggatataaggcgag 244
           ||||||||| | | ||||| |||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 219 cgtggcatctattggggctcgggtacaacccaaacgtcaacgagaaggagatcaggcggg 278

                                                                       
Query: 245 cgacagtcatccacttcaacggaaacttgaagctcctggcttgagattggattgcccaaa 304
           |  | ||||| |||| |||||||||| |||||| ||||||||||||| ||  || | |||
Sbjct: 279 catccgtcattcactacaacggaaacctgaagc-cctggcttgagatcgggctgtcgaaa 337

                                                                       
Query: 305 taccgcaagtactggtcagcacacgtcaattacgaccaagtgtttctacaagagtgcaat 364
           ||||| || ||||||||    || ||||||||||| ||||||||| |||  |||||||| 
Sbjct: 338 taccgaaaatactggtcgcggcatgtcaattacgatcaagtgtttatacgggagtgcaac 397

                   
Query: 365 ataaaccc 372
           ||||||||
Sbjct: 398 ataaaccc 405
>gb|CA599803.1|CA599803 waw1c.pk004.l9 waw1c Triticum aestivum cDNA clone waw1c.pk004.l9 5'
           end, mRNA sequence
          Length = 663

 Score =  182 bits (92), Expect = 2e-044
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                       
Query: 5   gcttgtggttgggcatatggcatgaacatgtttgatttgtctgggtggagaaagcaaaac 64
           ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 502 gcttgtggttgggcatatggcatgaacatgtttgatttgtccgagtggagaaagcaaaac 561

                                                                       
Query: 65  atcaccgaggtctaccatacctggcagaagttgaatgaaaacaggctattgtggaagcta 124
           |||||||| |||||||| |||||||||||  |||||||| |||||||| | |||||||||
Sbjct: 562 atcaccgacgtctaccacacctggcagaacctgaatgaagacaggctactatggaagcta 621

                                                   
Query: 125 ggtaccctccctgctggccttgtaaccttctggaaccgca 164
           || | |||||||||    ||||| || || ||||||||||
Sbjct: 622 ggcagcctccctgcnnnncttgtgacgttttggaaccgca 661
>gb|CD926381.1|CD926381 G750.121O11F010711 G750 Triticum aestivum cDNA clone G750121O11,
           mRNA sequence
          Length = 538

 Score =  180 bits (91), Expect = 8e-044
 Identities = 157/178 (88%), Gaps = 2/178 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gcttgtggttgggcatatggcatgaacatgtttgatttgtctgggtggagaaagcaaaac 64
           ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||
Sbjct: 359 gcttgtggttgggcatatggcatgaacatgtatgatttgtccgagtggagaaagcaaaac 418

                                                                       
Query: 65  atcaccgaggtctaccatacctggcagaagttgaatgaaaacaggctattgtggaagcta 124
           |||||||| |||||||| |||||||||||  |||||||  |||||||| | |||||||||
Sbjct: 419 atcaccgacgtctaccagacctggcagaacctgaatgacgacaggctactatggaagcta 478

                                                                     
Query: 125 ggtaccctccctgctggccttgtaaccttctggaaccgcatacgttccctcttgatcg 182
           || | ||||||||| |||||||| || ||  ||||||||  |||||||| ||||||||
Sbjct: 479 ggcagcctccctgcaggccttgtgacgtttgggaaccgc--acgttcccgcttgatcg 534
>gb|CA498726.1|CA498726 WHE3246_H11_O22ZT Wheat meiotic anther cDNA library Triticum
           aestivum cDNA clone WHE3246_H11_O22, mRNA sequence
          Length = 728

 Score = 79.8 bits (40), Expect = 2e-013
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                       
Query: 2   catgcttgtggttgggcatatggcatgaacatgtttgatttgtc 45
           |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 catgcttgcggttgggcatatggcatgaacatgtttgatttgtc 723
>gb|BJ214350.1|BJ214350 BJ214350 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
           cDNA clone wh26p15 5', mRNA sequence
          Length = 143

 Score = 48.1 bits (24), Expect = 8e-004
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 329 gtcaattacgaccaagtgtttctacaagagtgcaatataaaccc 372
           ||||||||||| ||||||||| |||  |||||||| ||||||||
Sbjct: 22  gtcaattacgatcaagtgtttatacgggagtgcaacataaaccc 65
>gb|BJ221838.1|BJ221838 BJ221838 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
           cDNA clone wh26p15 3', mRNA sequence
          Length = 104

 Score = 48.1 bits (24), Expect = 8e-004
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 329 gtcaattacgaccaagtgtttctacaagagtgcaatataaaccc 372
           ||||||||||| ||||||||| |||  |||||||| ||||||||
Sbjct: 93  gtcaattacgatcaagtgtttatacgggagtgcaacataaaccc 50
>gb|BJ266251.1|BJ266251 BJ266251 Y. Ogihara unpublished cDNA library, Wh_h Triticum
           aestivum cDNA clone whh25k11 3', mRNA sequence
          Length = 620

 Score = 48.1 bits (24), Expect = 8e-004
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 4   tgcttgtggttgggcatatggcatgaacatgtttga 39
           ||||||||||||||| | ||| ||||||||||||||
Sbjct: 230 tgcttgtggttgggcttttggaatgaacatgtttga 195
>gb|BJ266252.1|BJ266252 BJ266252 Y. Ogihara unpublished cDNA library, Wh_h Triticum
           aestivum cDNA clone whh25k12 3', mRNA sequence
          Length = 642

 Score = 48.1 bits (24), Expect = 8e-004
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 4   tgcttgtggttgggcatatggcatgaacatgtttga 39
           ||||||||||||||| | ||| ||||||||||||||
Sbjct: 304 tgcttgtggttgggcttttggaatgaacatgtttga 269
>gb|BJ266257.1|BJ266257 BJ266257 Y. Ogihara unpublished cDNA library, Wh_h Triticum
          aestivum cDNA clone whh25k23 3', mRNA sequence
          Length = 382

 Score = 48.1 bits (24), Expect = 8e-004
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                              
Query: 4  tgcttgtggttgggcatatggcatgaacatgtttga 39
          ||||||||||||||| | ||| ||||||||||||||
Sbjct: 79 tgcttgtggttgggcttttggaatgaacatgtttga 44
>gb|CV761089.1|CV761089 FGAS055477 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
           aestivum cDNA, mRNA sequence
          Length = 823

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 77  taccatacctggcagaagttgaatgaaaacaggctattgtggaagctaggtaccctccc 135
           |||||||  ||||||||  ||||||||||||||||  ||||||| || || ||||||||
Sbjct: 668 taccataagtggcagaacatgaatgaaaacaggctgctgtggaaactggggaccctccc 726
>gb|BE500883.1|BE500883 WHE0991-0994_H16_H16ZS Wheat pre-anthesis spike cDNA library
           Triticum aestivum cDNA clone WHE0991-0994_H16_H16, mRNA
           sequence
          Length = 376

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 77  taccatacctggcagaagttgaatgaaaacaggctattgtggaa 120
           |||||||  ||||||||  ||||||||||||||||  |||||||
Sbjct: 311 taccataagtggcagaacatgaatgaaaacaggctgctgtggaa 268
>gb|BJ214352.1|BJ214352 BJ214352 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
           cDNA clone wh26p17 5', mRNA sequence
          Length = 152

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 329 gtcaattacgaccaagtgtttctacaagagtgcaatataaaccc 372
           |||||||||||  |||||||| |||  |||||||| ||||||||
Sbjct: 31  gtcaattacgataaagtgtttatacgggagtgcaacataaaccc 74
>gb|CA497997.1|CA497997 WHE3237_C01_E01ZT Wheat meiotic anther cDNA library Triticum
           aestivum cDNA clone WHE3237_C01_E01, mRNA sequence
          Length = 573

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 77  taccatacctggcagaagttgaatgaaaacaggctattgtggaa 120
           |||||||  ||||||||  ||||||||||||||||  |||||||
Sbjct: 187 taccataagtggcagaacatgaatgaaaacaggctgctgtggaa 230
>gb|CA498089.1|CA498089 WHE3238_C01_E02ZT Wheat meiotic anther cDNA library Triticum
           aestivum cDNA clone WHE3238_C01_E02, mRNA sequence
          Length = 683

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 77  taccatacctggcagaagttgaatgaaaacaggctattgtggaa 120
           |||||||  ||||||||  ||||||||||||||||  |||||||
Sbjct: 181 taccataagtggcagaacatgaatgaaaacaggctgctgtggaa 224
>gb|CA498138.1|CA498138 WHE3239_C01_F01ZT Wheat meiotic anther cDNA library Triticum
           aestivum cDNA clone WHE3239_C01_F01, mRNA sequence
          Length = 710

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 77  taccatacctggcagaagttgaatgaaaacaggctattgtggaa 120
           |||||||  ||||||||  ||||||||||||||||  |||||||
Sbjct: 206 taccataagtggcagaacatgaatgaaaacaggctgctgtggaa 249
  Database: Triticum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  3:01 PM
  Number of letters in database: 367,240,239
  Number of sequences in database:  636,343
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 90,796
Number of Sequences: 636343
Number of extensions: 90796
Number of successful extensions: 22780
Number of sequences better than  0.5: 18
Number of HSP's better than  0.5 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22746
Number of HSP's gapped (non-prelim): 24
length of query: 689
length of database: 367,240,239
effective HSP length: 19
effective length of query: 670
effective length of database: 355,149,722
effective search space: 237950313740
effective search space used: 237950313740
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)